View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3237_low_127 (Length: 245)

Name: NF3237_low_127
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3237_low_127
NF3237_low_127
[»] chr4 (59 HSPs)
chr4 (12-65)||(40308462-40308515)
chr4 (12-65)||(40721961-40722014)
chr4 (6-54)||(25725685-25725733)
chr4 (21-65)||(30866374-30866418)
chr4 (15-54)||(29513696-29513735)
chr4 (6-65)||(39881021-39881080)
chr4 (15-54)||(51224838-51224877)
chr4 (15-54)||(56025288-56025327)
chr4 (6-56)||(610835-610885)
chr4 (6-64)||(9472504-9472562)
chr4 (6-64)||(12241080-12241138)
chr4 (6-64)||(33820327-33820385)
chr4 (16-65)||(45548785-45548834)
chr4 (6-54)||(17363262-17363310)
chr4 (18-54)||(31048920-31048956)
chr4 (21-65)||(36444401-36444445)
chr4 (2-62)||(38382135-38382195)
chr4 (6-65)||(1562527-1562586)
chr4 (15-50)||(2109468-2109503)
chr4 (21-64)||(36512864-36512907)
chr4 (6-56)||(1031785-1031835)
chr4 (6-64)||(17805474-17805532)
chr4 (6-64)||(18880807-18880865)
chr4 (12-54)||(39010134-39010176)
chr4 (15-53)||(42490942-42490980)
chr4 (15-65)||(47519720-47519770)
chr4 (21-51)||(50608630-50608660)
chr4 (21-51)||(51389351-51389381)
chr4 (6-64)||(52891841-52891899)
chr4 (6-51)||(22893903-22893948)
chr4 (6-51)||(22945571-22945616)
chr4 (21-54)||(25523204-25523237)
chr4 (15-60)||(29891871-29891916)
chr4 (21-54)||(31275178-31275211)
chr4 (23-64)||(34114125-34114166)
chr4 (23-64)||(37869786-37869827)
chr4 (21-54)||(45274297-45274330)
chr4 (21-54)||(46794507-46794540)
chr4 (19-64)||(46844245-46844290)
chr4 (21-54)||(46911930-46911963)
chr4 (22-63)||(49424827-49424868)
chr4 (21-54)||(53583134-53583167)
chr4 (21-54)||(55595981-55596014)
chr4 (6-54)||(1688419-1688467)
chr4 (21-65)||(3968906-3968950)
chr4 (6-54)||(11064080-11064128)
chr4 (6-54)||(22920262-22920310)
chr4 (6-54)||(22971489-22971537)
chr4 (21-65)||(24772692-24772736)
chr4 (2-62)||(34616374-34616434)
chr4 (6-62)||(35332730-35332786)
chr4 (6-54)||(36081831-36081879)
chr4 (15-51)||(40409166-40409202)
chr4 (15-47)||(41849730-41849762)
chr4 (15-43)||(45176735-45176763)
chr4 (6-54)||(48722101-48722149)
chr4 (15-51)||(49768869-49768905)
chr4 (15-51)||(54165161-54165197)
chr4 (2-62)||(56364247-56364307)
[»] chr7 (34 HSPs)
chr7 (6-65)||(16567337-16567396)
chr7 (6-65)||(16598266-16598325)
chr7 (12-54)||(1790023-1790065)
chr7 (6-47)||(26041349-26041390)
chr7 (15-56)||(42060686-42060727)
chr7 (6-54)||(44511171-44511219)
chr7 (15-56)||(33881705-33881746)
chr7 (6-62)||(17500721-17500777)
chr7 (6-62)||(17552437-17552493)
chr7 (6-65)||(3341720-3341779)
chr7 (6-65)||(11070249-11070308)
chr7 (15-54)||(20406573-20406612)
chr7 (15-54)||(29609864-29609903)
chr7 (21-64)||(42640865-42640908)
chr7 (19-65)||(25614825-25614871)
chr7 (21-54)||(5378659-5378692)
chr7 (21-54)||(9055299-9055332)
chr7 (21-54)||(19426612-19426645)
chr7 (24-65)||(23329923-23329964)
chr7 (21-65)||(35586778-35586823)
chr7 (6-51)||(36186867-36186912)
chr7 (21-65)||(41893936-41893981)
chr7 (21-62)||(47644729-47644770)
chr7 (21-65)||(47954107-47954152)
chr7 (16-75)||(2323303-2323363)
chr7 (21-65)||(5978600-5978644)
chr7 (15-51)||(16645679-16645715)
chr7 (15-51)||(17620040-17620076)
chr7 (21-65)||(28081788-28081832)
chr7 (28-56)||(34976863-34976891)
chr7 (17-65)||(38978513-38978561)
chr7 (21-53)||(41254809-41254841)
chr7 (17-65)||(44175566-44175614)
chr7 (6-54)||(44216131-44216179)
[»] chr1 (42 HSPs)
chr1 (15-65)||(9445129-9445179)
chr1 (12-65)||(26501316-26501369)
chr1 (6-65)||(12717656-12717715)
chr1 (21-74)||(29154793-29154846)
chr1 (12-65)||(51193128-51193181)
chr1 (6-58)||(27895751-27895803)
chr1 (17-65)||(33660062-33660110)
chr1 (6-54)||(43196080-43196128)
chr1 (21-56)||(366687-366722)
chr1 (15-54)||(2257694-2257733)
chr1 (15-54)||(5383791-5383830)
chr1 (6-65)||(12708111-12708170)
chr1 (6-65)||(18541042-18541101)
chr1 (6-65)||(21728225-21728284)
chr1 (6-65)||(49596256-49596315)
chr1 (6-65)||(49699743-49699802)
chr1 (21-75)||(21441648-21441701)
chr1 (7-65)||(44672022-44672080)
chr1 (12-54)||(44950418-44950460)
chr1 (12-53)||(5975570-5975611)
chr1 (6-51)||(11812422-11812467)
chr1 (24-65)||(12713565-12713606)
chr1 (6-43)||(19651453-19651490)
chr1 (12-65)||(27352651-27352704)
chr1 (21-54)||(27810253-27810286)
chr1 (6-51)||(30196749-30196794)
chr1 (15-56)||(30631843-30631884)
chr1 (21-54)||(33422225-33422258)
chr1 (21-54)||(39010846-39010879)
chr1 (24-65)||(43755687-43755728)
chr1 (21-54)||(50141941-50141974)
chr1 (21-54)||(52417563-52417596)
chr1 (6-54)||(3606085-3606133)
chr1 (6-54)||(5959420-5959468)
chr1 (6-54)||(8464504-8464552)
chr1 (12-56)||(14247694-14247738)
chr1 (6-54)||(24158682-24158730)
chr1 (6-54)||(39815378-39815426)
chr1 (21-53)||(45272166-45272198)
chr1 (21-65)||(49621384-49621428)
chr1 (24-64)||(50017432-50017472)
chr1 (21-65)||(51466790-51466834)
[»] chr6 (20 HSPs)
chr6 (12-53)||(237395-237436)
chr6 (6-62)||(23633314-23633370)
chr6 (15-54)||(25924864-25924903)
chr6 (21-65)||(19789082-19789126)
chr6 (6-54)||(21506368-21506416)
chr6 (18-54)||(28965843-28965879)
chr6 (7-65)||(8778864-8778922)
chr6 (21-51)||(9200143-9200173)
chr6 (12-54)||(14094943-14094985)
chr6 (21-54)||(8395374-8395407)
chr6 (21-65)||(16337928-16337973)
chr6 (12-65)||(16743263-16743316)
chr6 (6-63)||(17835635-17835692)
chr6 (21-54)||(29383589-29383622)
chr6 (21-65)||(34570600-34570645)
chr6 (6-62)||(7693339-7693395)
chr6 (12-64)||(11635639-11635691)
chr6 (6-54)||(14803364-14803412)
chr6 (21-65)||(29173011-29173055)
chr6 (6-54)||(29376706-29376754)
[»] scaffold0172 (1 HSPs)
scaffold0172 (6-54)||(17007-17055)
[»] chr8 (46 HSPs)
chr8 (12-64)||(5924832-5924884)
chr8 (12-64)||(10344346-10344398)
chr8 (18-65)||(1332471-1332518)
chr8 (15-54)||(6105436-6105475)
chr8 (6-65)||(9550398-9550457)
chr8 (7-62)||(29910204-29910259)
chr8 (12-51)||(35595245-35595284)
chr8 (6-65)||(39021434-39021493)
chr8 (6-56)||(14228737-14228787)
chr8 (15-65)||(37873105-37873155)
chr8 (19-56)||(28623115-28623152)
chr8 (6-63)||(34970230-34970287)
chr8 (12-64)||(14531643-14531695)
chr8 (21-65)||(20473800-20473844)
chr8 (18-54)||(29509298-29509334)
chr8 (6-54)||(43587673-43587721)
chr8 (6-65)||(6161969-6162028)
chr8 (6-65)||(9048307-9048366)
chr8 (7-54)||(12659084-12659131)
chr8 (6-65)||(27630918-27630977)
chr8 (23-62)||(42012598-42012637)
chr8 (24-54)||(3756933-3756963)
chr8 (15-57)||(11114669-11114711)
chr8 (24-65)||(23754715-23754757)
chr8 (6-56)||(42716350-42716400)
chr8 (21-54)||(5642396-5642429)
chr8 (21-54)||(5644337-5644370)
chr8 (21-62)||(11155898-11155939)
chr8 (21-54)||(11879496-11879529)
chr8 (21-54)||(11896912-11896945)
chr8 (12-65)||(14548820-14548873)
chr8 (12-65)||(16808602-16808655)
chr8 (15-64)||(30608708-30608757)
chr8 (21-65)||(33100474-33100519)
chr8 (21-54)||(37210055-37210088)
chr8 (21-62)||(40464980-40465021)
chr8 (21-65)||(43285968-43286013)
chr8 (17-54)||(43602425-43602462)
chr8 (6-51)||(43873682-43873727)
chr8 (21-54)||(45101428-45101461)
chr8 (21-53)||(324100-324132)
chr8 (6-54)||(24946034-24946082)
chr8 (22-54)||(27836212-27836244)
chr8 (21-65)||(35818958-35819002)
chr8 (6-54)||(37562132-37562180)
chr8 (7-51)||(43403866-43403910)
[»] chr2 (38 HSPs)
chr2 (6-54)||(6851650-6851698)
chr2 (12-64)||(36795752-36795804)
chr2 (12-65)||(31635807-31635860)
chr2 (6-51)||(33857252-33857297)
chr2 (6-63)||(41868360-41868417)
chr2 (6-51)||(42678581-42678626)
chr2 (21-65)||(7497997-7498041)
chr2 (7-51)||(35965610-35965654)
chr2 (6-54)||(42665803-42665851)
chr2 (12-51)||(4263861-4263900)
chr2 (6-65)||(4723587-4723646)
chr2 (15-54)||(27540047-27540086)
chr2 (21-55)||(23045121-23045155)
chr2 (12-54)||(36383494-36383536)
chr2 (12-54)||(42141591-42141633)
chr2 (21-54)||(7086130-7086163)
chr2 (15-56)||(12175328-12175369)
chr2 (21-54)||(14797656-14797689)
chr2 (21-65)||(29449232-29449277)
chr2 (15-64)||(36816416-36816465)
chr2 (21-65)||(42532744-42532789)
chr2 (12-45)||(44484653-44484686)
chr2 (15-64)||(45372498-45372547)
chr2 (21-65)||(6639478-6639522)
chr2 (12-56)||(6884940-6884984)
chr2 (12-64)||(8352857-8352909)
chr2 (21-65)||(9202522-9202566)
chr2 (6-54)||(11728112-11728160)
chr2 (2-54)||(13104511-13104563)
chr2 (6-54)||(18619388-18619436)
chr2 (21-65)||(23344995-23345039)
chr2 (12-64)||(23358576-23358628)
chr2 (21-65)||(30339875-30339919)
chr2 (21-53)||(30996761-30996793)
chr2 (12-56)||(36763521-36763565)
chr2 (21-53)||(40496383-40496415)
chr2 (21-53)||(42081070-42081102)
chr2 (6-54)||(42554808-42554856)
[»] scaffold0154 (1 HSPs)
scaffold0154 (6-65)||(4336-4395)
[»] chr3 (34 HSPs)
chr3 (6-65)||(41717471-41717530)
chr3 (15-54)||(41877720-41877759)
chr3 (6-64)||(47988476-47988534)
chr3 (6-64)||(47997763-47997821)
chr3 (6-64)||(48007050-48007108)
chr3 (21-81)||(11056928-11056989)
chr3 (21-73)||(35554121-35554174)
chr3 (21-65)||(622466-622510)
chr3 (21-65)||(43333676-43333720)
chr3 (6-54)||(43900748-43900796)
chr3 (15-54)||(7949823-7949862)
chr3 (6-65)||(41369618-41369677)
chr3 (15-81)||(50876362-50876429)
chr3 (6-65)||(51032615-51032674)
chr3 (21-56)||(51672893-51672928)
chr3 (6-65)||(55466979-55467038)
chr3 (6-56)||(2935502-2935552)
chr3 (6-52)||(22153898-22153944)
chr3 (15-65)||(27162469-27162519)
chr3 (15-65)||(35756005-35756054)
chr3 (12-58)||(52678574-52678620)
chr3 (21-54)||(6126486-6126519)
chr3 (21-54)||(26279916-26279949)
chr3 (21-54)||(37303080-37303113)
chr3 (21-54)||(37303415-37303448)
chr3 (21-54)||(44334807-44334840)
chr3 (21-54)||(48649612-48649645)
chr3 (12-76)||(50146486-50146551)
chr3 (22-54)||(8066387-8066419)
chr3 (15-51)||(25542971-25543007)
chr3 (6-54)||(32008065-32008113)
chr3 (12-64)||(40159835-40159887)
chr3 (21-65)||(47849693-47849737)
chr3 (6-54)||(53102893-53102941)
[»] scaffold0024 (1 HSPs)
scaffold0024 (7-65)||(60490-60548)
[»] chr5 (39 HSPs)
chr5 (12-62)||(31329123-31329173)
chr5 (21-65)||(4088464-4088509)
chr5 (12-65)||(19271880-19271933)
chr5 (12-65)||(22920489-22920542)
chr5 (24-65)||(31708391-31708432)
chr5 (12-65)||(32424972-32425025)
chr5 (2-51)||(41192622-41192671)
chr5 (6-54)||(21023330-21023378)
chr5 (6-54)||(36572723-36572771)
chr5 (15-54)||(12417658-12417697)
chr5 (15-54)||(31006091-31006130)
chr5 (6-64)||(2456048-2456106)
chr5 (15-65)||(8897403-8897453)
chr5 (12-54)||(14914404-14914446)
chr5 (12-54)||(26627362-26627404)
chr5 (21-65)||(189708-189753)
chr5 (21-54)||(6046345-6046378)
chr5 (15-56)||(6538900-6538941)
chr5 (21-65)||(6940155-6940200)
chr5 (21-65)||(10649456-10649501)
chr5 (21-62)||(16292255-16292296)
chr5 (21-65)||(19481187-19481232)
chr5 (21-54)||(32873155-32873188)
chr5 (6-51)||(33910079-33910124)
chr5 (21-54)||(34381044-34381077)
chr5 (17-54)||(36548382-36548419)
chr5 (21-54)||(40223791-40223824)
chr5 (6-54)||(2117615-2117663)
chr5 (6-54)||(3031866-3031914)
chr5 (6-54)||(3770997-3771045)
chr5 (21-56)||(9581609-9581645)
chr5 (12-64)||(11880984-11881036)
chr5 (6-54)||(12779597-12779645)
chr5 (15-51)||(16553539-16553575)
chr5 (2-62)||(17625799-17625859)
chr5 (6-62)||(27340893-27340949)
chr5 (15-51)||(39054622-39054658)
chr5 (6-54)||(39840700-39840748)
chr5 (21-64)||(40364590-40364634)
[»] scaffold0020 (1 HSPs)
scaffold0020 (6-65)||(155927-155986)
[»] scaffold0085 (1 HSPs)
scaffold0085 (12-65)||(31297-31348)
[»] scaffold0011 (1 HSPs)
scaffold0011 (6-56)||(18625-18675)
[»] scaffold0060 (1 HSPs)
scaffold0060 (21-54)||(6849-6882)
[»] scaffold0004 (1 HSPs)
scaffold0004 (12-56)||(249139-249183)
[»] scaffold0002 (1 HSPs)
scaffold0002 (21-65)||(6448-6492)


Alignment Details
Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 40308515 - 40308462
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||||||||||    
T  40308515 aagaatataatgtgagtatgaaagagaaagttgtcaaaaaattattataaaatg 40308462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 40721961 - 40722014
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  40721961 aagaacatcatgtgagtatgagagagaaagttgtccaaaaattattataaaatg 40722014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 25725685 - 25725733
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  25725685 gagaataaaaacataatgtgagtatgaaagagaaagttgtcaaaaagtt 25725733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 30866418 - 30866374
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||    
T  30866418 atgtgagtatgaaagagaaagttgtcaaaaatttatcataaaatg 30866374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 29513696 - 29513735
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29513696 aacatcatgtgagtatgagagagaaagttgtcaaaaagtt 29513735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 39881021 - 39881080
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||||    
T  39881021 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatg 39881080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 51224838 - 51224877
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  51224838 aacatcatgtgagtatgagagagaaagttgtcaaaaagtt 51224877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 56025327 - 56025288
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  56025327 aacatcatgtgagtatgagagagaaagttgtcaaaaagtt 56025288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 610885 - 610835
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| |||||||||| |||||||||||||||||||| || ||||||||||    
T  610885 gagaataagaacatcacgtgagtatgaaagagaaagtagtaaaaaagttat 610835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 9472504 - 9472562
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||| |||||| |||||    
T  9472504 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaaattattagaaaat 9472562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 12241138 - 12241080
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| || ||||| |||||||||||| ||||||||||||||||||||| ||| |||||    
T  12241138 gagaataaaaacataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaat 12241080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 33820327 - 33820385
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| || ||||| |||||||||||| ||||||||||||||||||||| ||| |||||    
T  33820327 gagaataaaaacataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaat 33820385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 45548785 - 45548834
Alignment:
Q  16 acatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||||||| |||||||||||||| |||| | ||||||    
T  45548785 acatcatgtgagtatgaaagaaaaagttgtcaaaaaattatcacaaaatg 45548834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 17363310 - 17363262
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||||||    
T  17363310 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagtt 17363262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 31048956 - 31048920
Alignment:
Q  18 atcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31048956 atcatgtgagtatgagagagaaagttgtcaaaaagtt 31048920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 36444401 - 36444445
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||| |||||||||| ||||||||    
T  36444401 atgtgagtatgagagagaaagttgttaaaaagttatcataaaatg 36444445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 38382195 - 38382135
Alignment:
Q  2 gagtgagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||||||| ||||| || | |||||||||| |||||| |||||||||||||||| |||||    
T  38382195 gagtgagaataagaatataacgtgagtatgagagagaaggttgtcaaaaagttatcataaa 38382135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 1562527 - 1562586
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || || ||||||||| ||||||||||||||||||||| ||| ||||||    
T  1562527 gagaataagaaaataatatgagtatgagagagaaagttgtcaaaaagttgttagaaaatg 1562586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 2109503 - 2109468
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaa 50  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2109503 aacataatgtgagtatgaaagagaaagttgtcaaaa 2109468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 36512907 - 36512864
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    |||||||||||| |||||| |||||||||||||| |||||||||    
T  36512907 atgtgagtatgagagagaaggttgtcaaaaagttgttataaaat 36512864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 1031835 - 1031785
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| || ||||| |||||||||||| ||||||||||||||| |||||||    
T  1031835 gagaataaaaacataatgtgagtatgagagagaaagttgtcaagaagttat 1031785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 17805532 - 17805474
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| ||||| || |||||||||||| ||||||| |||||||||| |||||| |||||    
T  17805532 gagaataagaaaataatgtgagtatgagagagaaaattgtcaaaaaattattaaaaaat 17805474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 18880865 - 18880807
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| ||||| || |||||||||||| ||||||| ||||| ||||||||| |||||||    
T  18880865 gagaataagaatataatgtgagtatgagagagaaaattgtctaaaagttatcataaaat 18880807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 39010134 - 39010176
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||    
T  39010134 aagaacatcatttgagtatgagagagaaagctgtcaaaaagtt 39010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 42490980 - 42490942
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  42490980 aacataatgtgagtatgagagagaaagttgtcaaaaagt 42490942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 47519720 - 47519770
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||||| ||||||||||||  ||||||| ||| ||||||    
T  47519720 aacatcatgtgagtatgagagagaaagttgttcaaaagttgttacaaaatg 47519770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 50608630 - 50608660
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  50608630 atgtgagtatgaaagagaaagttgtcaaaaa 50608660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 51389381 - 51389351
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  51389381 atgtgagtatgaaagagaaagttgtcaaaaa 51389351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 52891841 - 52891899
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| |||| ||| |||||||||| | ||||||||||||||||||||| ||| |||||    
T  52891841 gagaataagagcatgatgtgagtataagagagaaagttgtcaaaaagttcttagaaaat 52891899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 22893948 - 22893903
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||| || ||||||||||||||||||||||||| |||||    
T  22893948 gagaataagaagataatgtgagtatgaaagagaaagttgtaaaaaa 22893903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 22945616 - 22945571
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||| || ||||||||||||||||||||||||| |||||    
T  22945616 gagaataagaagataatgtgagtatgaaagagaaagttgtaaaaaa 22945571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 25523204 - 25523237
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  25523204 atgtgagtatgagagagaaagttgtcaaaaagtt 25523237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 29891916 - 29891871
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattata 60  Q
    ||||| |||||||||||| |||||||||||||||||| | ||||||    
T  29891916 aacataatgtgagtatgagagagaaagttgtcaaaaaataattata 29891871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 31275211 - 31275178
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  31275211 atgtgagtatgagagagaaagttgtcaaaaagtt 31275178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 34114125 - 34114166
Alignment:
Q  23 gtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    |||||||||| ||| ||||||||||||||||||| |||||||    
T  34114125 gtgagtatgagagaaaaagttgtcaaaaagttataataaaat 34114166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 37869786 - 37869827
Alignment:
Q  23 gtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    |||||||||| ||||||||||||| ||||||||||| |||||    
T  37869786 gtgagtatgagagagaaagttgtctaaaagttattacaaaat 37869827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 45274330 - 45274297
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  45274330 atgtgagtatgagagagaaagttgtcaaaaagtt 45274297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 46794507 - 46794540
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  46794507 atgtgagtatgagagagaaagttgtcaaaaagtt 46794540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 46844245 - 46844290
Alignment:
Q  19 tcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    |||||||||||||| |||||||||||||||||| || ||| |||||    
T  46844245 tcatgtgagtatgagagagaaagttgtcaaaaaattgttacaaaat 46844290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 46911963 - 46911930
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  46911963 atgtgagtatgagagagaaagttgtcaaaaagtt 46911930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 49424827 - 49424868
Alignment:
Q  22 tgtgagtatgaaagagaaagttgtcaaaaagttattataaaa 63  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||    
T  49424827 tgtgagtatgagagagaaagttgtcaaaaagttgttacaaaa 49424868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 53583134 - 53583167
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  53583134 atgtgagtatgagagagaaagttgtcaaaaagtt 53583167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 55596014 - 55595981
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  55596014 atgtgagtatgagagagaaagttgtcaaaaagtt 55595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1688419 - 1688467
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||| ||||||||    
T  1688419 gagaataagaatataatgtgagtatgagagagaaagttgtaaaaaagtt 1688467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 3968950 - 3968906
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||| |||| ||||||||||||| ||| ||||||    
T  3968950 atgtgagtatgaaagggaaaattgtcaaaaagttgttagaaaatg 3968906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 11064080 - 11064128
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| |||| ||| |||||||||||| |||||| ||||||||||||||    
T  11064080 gagaataagagcataatgtgagtatgagagagaatgttgtcaaaaagtt 11064128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 22920262 - 22920310
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||| ||||||||||||    
T  22920262 gagaataagaatataatgtgagtatgagagagaaagatgtcaaaaagtt 22920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 22971537 - 22971489
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||| ||||||||||||    
T  22971537 gagaataagaatataatgtgagtatgagagagaaagatgtcaaaaagtt 22971489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 24772736 - 24772692
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| |||||| |||||||||||||| | ||||||||    
T  24772736 atgtgagtatgagagagaaggttgtcaaaaagttgtcataaaatg 24772692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 34616434 - 34616374
Alignment:
Q  2 gagtgagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||||||| ||||  || | |||||||||| |||||| |||||||||||||||| |||||    
T  34616434 gagtgagaataagagtataacgtgagtatgagagagaaggttgtcaaaaagttatcataaa 34616374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 35332786 - 35332730
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||| ||||| || |||||||||||| |||||||||| ||||||| |||| |||||    
T  35332786 gagaataagaatataatgtgagtatgagagagaaagttatcaaaaaattatcataaa 35332730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 36081879 - 36081831
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| ||||||||||||| |||||||    
T  36081879 gagaataagaatataatgtgagtatgagagagaaagttgtccaaaagtt 36081831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 40409166 - 40409202
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  40409166 aacataatgtgagtatgagagagaaagttgtcaaaaa 40409202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 41849762 - 41849730
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtca 47  Q
    ||||| |||||||||||||||||||||||||||    
T  41849762 aacataatgtgagtatgaaagagaaagttgtca 41849730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 45176735 - 45176763
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagtt 43  Q
    |||||||||||||||||||||||||||||    
T  45176735 aacatcatgtgagtatgaaagagaaagtt 45176763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 48722149 - 48722101
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| |||||||||||| ||||||| |||||||||||||    
T  48722149 gagaataaaaacataatgtgagtatgagagagaaaattgtcaaaaagtt 48722101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 49768869 - 49768905
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  49768869 aacataatgtgagtatgagagagaaagttgtcaaaaa 49768905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 54165161 - 54165197
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  54165161 aacatcatgtgagtatgagagaaaaagttgtcaaaaa 54165197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 56364247 - 56364307
Alignment:
Q  2 gagtgagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||||||| ||||  || | |||||||||| |||||| |||||||||||||||| |||||    
T  56364247 gagtgagaataagagtataacgtgagtatgagagagaaggttgtcaaaaagttatcataaa 56364307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 16567396 - 16567337
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||||||||||| ||||||||||||||| ||||||||    
T  16567396 gagaataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatg 16567337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 16598266 - 16598325
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||||||||||| ||||||||||||||| ||||||||    
T  16598266 gagaataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatg 16598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 1790065 - 1790023
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  1790065 aagaacatcatgtgagtatgagagagaaagttgtcaaaaagtt 1790023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 26041390 - 26041349
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtca 47  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  26041390 gagaataagaacatcatgtgagtatgaaagagaaagttgtca 26041349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 42060727 - 42060686
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  42060727 aacatcatgtgagtatgagagagaaagttgtcaaaaagttat 42060686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 44511219 - 44511171
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  44511219 gagaataagaacatcatgtgagtatgaaagagaaagttgtacaaaagtt 44511171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 33881705 - 33881746
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  33881705 aacatcatgtgagtatgagagagaaagttatcaaaaagttat 33881746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 17500777 - 17500721
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||| ||||| || |||||||||||| ||| ||||||||||||||||||| |||||    
T  17500777 gagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaa 17500721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 17552437 - 17552493
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||| ||||| || |||||||||||| ||| ||||||||||||||||||| |||||    
T  17552437 gagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaa 17552493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 3341779 - 3341720
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || |||||||||||||||||| ||||||||| ||| ||||||| ||| ||||||    
T  3341779 gagaataataacatcatgtgagtatgagagagaaagtcgtcgaaaagttcttaaaaaatg 3341720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 11070308 - 11070249
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| |||||||| |||||||||||| ||||||||||||  |||||||||  |||||||    
T  11070308 gagaataagaacataatgtgagtatgatagagaaagttgtacaaaagttatactaaaatg 11070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 20406612 - 20406573
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  20406612 aacatcatgtgagtatgagaaagaaagttgtcaaaaagtt 20406573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 29609864 - 29609903
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  29609864 aacatcatgtaagtatgagagagaaagttgtcaaaaagtt 29609903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 42640908 - 42640865
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||    
T  42640908 atgtgagtatgtaagagaaagttgtcaaaaagttgttagaaaat 42640865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 25614825 - 25614871
Alignment:
Q  19 tcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||||||||||||||  ||||||||| | ||||||    
T  25614825 tcatgtgagtatgaaagagaaagttgtgcaaaagttatcaaaaaatg 25614871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 5378692 - 5378659
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  5378692 atgtgagtatgagagagaaagttgtcaaaaagtt 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 9055332 - 9055299
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  9055332 atgtgagtatgagagagaaagttgtcaaaaagtt 9055299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 19426645 - 19426612
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  19426645 atgtgagtatgagagagaaagttgtcaaaaagtt 19426612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 23329964 - 23329923
Alignment:
Q  24 tgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||| |||||||||| |||| ||||||||    
T  23329964 tgagtatgaaagagaaaattgtcaaaaaattataataaaatg 23329923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 35586778 - 35586823
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||    
T  35586778 atgtgagtatgagagagaaagttgtcacaaaagttatcataaaatg 35586823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 36186867 - 36186912
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||    
T  36186867 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaa 36186912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 41893981 - 41893936
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||    
T  41893981 atgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatg 41893936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 47644770 - 47644729
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    |||||||||||| |||||||||||||||||| |||| |||||    
T  47644770 atgtgagtatgagagagaaagttgtcaaaaaattataataaa 47644729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 47954107 - 47954152
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  47954107 atgtgagtatgaaagagaaagttgtcacaaaagttgttagaaaatg 47954152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 2323363 - 2323303
Alignment:
Q  16 acatcatgtgagtatgaaagagaaagttgtcaaaaagttattata-aaatgtcatttctct 75  Q
    ||||||||||||||||| |||||||||||||| ||| || || || |||| ||||||||||    
T  2323363 acatcatgtgagtatgagagagaaagttgtcataaaattgttgtacaaatatcatttctct 2323303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 5978644 - 5978600
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||||||| |||| |||||||| | ||||||||    
T  5978644 atgtgagtatgaaagagaaaattgttaaaaagttgtcataaaatg 5978600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 16645679 - 16645715
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  16645679 aacatcatgtgactatgagagagaaagttgtcaaaaa 16645715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 17620040 - 17620076
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  17620040 aacatcatgtgactatgagagagaaagttgtcaaaaa 17620076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 28081788 - 28081832
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||| ||||| |||||| ||||||    
T  28081788 atgtgagtatgagagagaaagttgtaaaaaaattattacaaaatg 28081832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 34976891 - 34976863
Alignment:
Q  28 tatgaaagagaaagttgtcaaaaagttat 56  Q
    |||||||||||||||||||||||||||||    
T  34976891 tatgaaagagaaagttgtcaaaaagttat 34976863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 38978561 - 38978513
Alignment:
Q  17 catcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||| ||||||||||||||||||  ||||||||| ||| ||||    
T  38978561 catcatgtgaatatgaaagagaaagttgtacaaaagttatcatagaatg 38978513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 41254841 - 41254809
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    |||||||||||| ||||||||||||||||||||    
T  41254841 atgtgagtatgagagagaaagttgtcaaaaagt 41254809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 44175614 - 44175566
Alignment:
Q  17 catcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||| ||||||||||||  ||||||||| | ||||||    
T  44175614 catcatgtgagtatgagagagaaagttgtacaaaagttatcacaaaatg 44175566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 44216131 - 44216179
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| |||||||||||||| ||| |||||||||||||||    
T  44216131 gagaataaaaacataatgtgagtatgaaatagagagttgtcaaaaagtt 44216179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 9445179 - 9445129
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  9445179 aacataatgtgagtatgaaagagaaagttgtcaaaaagttgttacaaaatg 9445129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 26501369 - 26501316
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||    
T  26501369 aagaacatcatgtaagtatgagagagaaagttgtccaaaagttattacaaaatg 26501316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 12717715 - 12717656
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  12717715 gagaataaaaacataatgtgagtatgaaagagaaaattgtcaaaaagttgttagaaaatg 12717656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 29154846 - 29154793
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatgtcatttctc 74  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||  |||||||    
T  29154846 atgtgagtatgagagagaaagttgtcacaaagttattaaaaaatggaatttctc 29154793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 51193128 - 51193181
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||| |||||||||||||||| ||||||||||||| |||| || ||||||||||    
T  51193128 aagagcatcatgtgagtatgagagagaaagttgtccaaaaattgttataaaatg 51193181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 27895751 - 27895803
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttatta 58  Q
    ||||| ||||| ||| ||||||||||| |||||||||||||||||| ||||||    
T  27895751 gagaataagaaaatcttgtgagtatgagagagaaagttgtcaaaaaattatta 27895803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 33660110 - 33660062
Alignment:
Q  17 catcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||||||||||| || || |||| |||||||||||||    
T  33660110 catcatgtgagtatgaaagagaaaattatccaaaaattattataaaatg 33660062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 43196080 - 43196128
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || |||||||||||||||||| ||||||| |||||||||||||    
T  43196080 gagaataacaacatcatgtgagtatgagagagaaaattgtcaaaaagtt 43196128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 366722 - 366687
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||||||||||| |||||||||||||||||||||||    
T  366722 atgtgagtatgagagagaaagttgtcaaaaagttat 366687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 2257694 - 2257733
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  2257694 aacatcatgtgagtatgagagagaaagttgttaaaaagtt 2257733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 5383830 - 5383791
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  5383830 aacatcatgtgagtatgagagaaaaagttgtcaaaaagtt 5383791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 12708170 - 12708111
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||| |||||| ||||||||||||| ||||||||||||| ||| ||||||    
T  12708170 gagaataaaaacataatgtgattatgaaagagaaaattgtcaaaaagttgttagaaaatg 12708111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 18541042 - 18541101
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||| ||||| ||||||||||||||||||||| ||| ||||||    
T  18541042 gagaataagaagataatgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatg 18541101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 21728225 - 21728284
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || || ||||||||| ||||||||||||||||||||| ||| ||||||    
T  21728225 gagaataagaagataatatgagtatgagagagaaagttgtcaaaaagttgttagaaaatg 21728284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 49596315 - 49596256
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||| || | ||||||||    
T  49596315 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaaatg 49596256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 49699743 - 49699802
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||||||||||||||||| | | |||||||||| ||||| |||| ||||||||    
T  49699743 gagaaaaagaacatcatgtgagtataagaaagaaagttgttaaaaaattatcataaaatg 49699802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 21441701 - 21441648
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatgtcatttctct 75  Q
    |||||||||||| ||||||||||||||||||||| |||  |||| ||||||||||    
T  21441701 atgtgagtatgagagagaaagttgtcaaaaagttgtta-gaaatatcatttctct 21441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 44672022 - 44672080
Alignment:
Q  7 agaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||| ||||| || |||||||||||| ||||||| ||||||||||||| ||| ||||||    
T  44672022 agaataagaagataatgtgagtatgagagagaaaattgtcaaaaagttgttaaaaaatg 44672080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 44950418 - 44950460
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||||||||||||||||||||||| ||||||||    
T  44950418 aagaatataatgtgagtatgaaagagaaagttgttaaaaagtt 44950460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 5975611 - 5975570
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    ||||| || |||||||||||| ||||||||||||||||||||    
T  5975611 aagaatataatgtgagtatgagagagaaagttgtcaaaaagt 5975570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 11812467 - 11812422
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||||||||||||||||||| | | ||||||||||||||    
T  11812467 gagaaaaagaacatcatgtgagtatgagaaataaagttgtcaaaaa 11812422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 12713606 - 12713565
Alignment:
Q  24 tgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||    
T  12713606 tgagtatgaaagagaaaattgtcaaaaagttgttagaaaatg 12713565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 19651490 - 19651453
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagtt 43  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  19651490 gagaataagaacatcatgtgagtatgagagagaaagtt 19651453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 27352704 - 27352651
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || |||||||||||| ||||||||||||| ||||||||| | ||||||    
T  27352704 aagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatg 27352651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 27810253 - 27810286
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  27810253 atgtgagtatgagagagaaagttgtcaaaaagtt 27810286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30196794 - 30196749
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||    
T  30196794 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaa 30196749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 30631843 - 30631884
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| || ||||||||| |||||||||||||||||||||||    
T  30631843 aacataatatgagtatgagagagaaagttgtcaaaaagttat 30631884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 33422225 - 33422258
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  33422225 atgtgagtatgagagagaaagttgtcaaaaagtt 33422258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 39010879 - 39010846
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  39010879 atgtgagtatgagagagaaagttgtcaaaaagtt 39010846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 43755687 - 43755728
Alignment:
Q  24 tgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||| |||||||||| |||| ||||||||    
T  43755687 tgagtatgaaagagaaaattgtcaaaaaattatcataaaatg 43755728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 50141941 - 50141974
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  50141941 atgtgagtatgagagagaaagttgtcaaaaagtt 50141974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 52417596 - 52417563
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  52417596 atgtgagtatgagagagaaagttgtcaaaaagtt 52417563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3606085 - 3606133
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || || ||||||||| |||||||||||||||||||||    
T  3606085 gagaataagaatataatatgagtatgatagagaaagttgtcaaaaagtt 3606133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 5959468 - 5959420
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| |||||  |||||||||||||| ||||||||||||| |||||||    
T  5959468 gagaataagaatctcatgtgagtatgagagagaaagttgtccaaaagtt 5959420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 8464504 - 8464552
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| ||||||| |||||||||||||    
T  8464504 gagaataagaatataatgtgagtatgagagagaaaattgtcaaaaagtt 8464552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14247738 - 14247694
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||||||  ||||||||||| |||||||||||||||||| ||||    
T  14247738 aagaacatagtgtgagtatgagagagaaagttgtcaaaaaattat 14247694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 24158730 - 24158682
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| |||||||| |||||||||||||||| ||||||||  |||||||    
T  24158730 gagaataagaacataatgtgagtatgaaagataaagttgtataaaagtt 24158682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 39815426 - 39815378
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| ||||||||||||| |||||||    
T  39815426 gagaataagaatataatgtgagtatgagagagaaagttgtccaaaagtt 39815378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 45272166 - 45272198
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    |||||||||||| ||||||||||||||||||||    
T  45272166 atgtgagtatgagagagaaagttgtcaaaaagt 45272198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 49621428 - 49621384
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| ||||||||||||| |||| |||||| ||||||    
T  49621428 atgtgagtatgagagagaaagttgtctaaaaattattacaaaatg 49621384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 50017432 - 50017472
Alignment:
Q  24 tgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||||||| ||||||||||||||||||||| | |||||||    
T  50017432 tgagtatgagagagaaagttgtcaaaaagttgtaataaaat 50017472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 51466834 - 51466790
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||| |||||||||||||| |||| || |||||    
T  51466834 atgtgagtatgaaagaaaaagttgtcaaaaaattatcattaaatg 51466790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 237395 - 237436
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  237395 aagaacatcatgtgagtatgagagagaaagttgtcaaaaagt 237436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 23633314 - 23633370
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||||||| |||||    
T  23633314 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttataataaa 23633370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 25924864 - 25924903
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25924864 aacatcatgtgagtatgagagagaaagttgtcaaaaagtt 25924903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 19789082 - 19789126
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||    
T  19789082 atgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatg 19789126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 21506416 - 21506368
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||||||    
T  21506416 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagtt 21506368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 28965843 - 28965879
Alignment:
Q  18 atcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28965843 atcatgtgagtatgagagagaaagttgtcaaaaagtt 28965879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 8778864 - 8778922
Alignment:
Q  7 agaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||| ||||| || |||||||||||  ||||||||||||||||||||| ||| ||||||    
T  8778864 agaataagaagataatgtgagtatgtgagagaaagttgtcaaaaagttgttaaaaaatg 8778922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 9200173 - 9200143
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  9200173 atgtgagtatgaaagagaaagttgtcaaaaa 9200143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 14094985 - 14094943
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || |||||||||||| |||||||||||||||||||||    
T  14094985 aagaatataatgtgagtatgagagagaaagttgtcaaaaagtt 14094943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 8395407 - 8395374
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  8395407 atgtgagtatgagagagaaagttgtcaaaaagtt 8395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 16337928 - 16337973
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||    
T  16337928 atgtgagtatgagagagaaagttgttacaaaagttattataaaatg 16337973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 16743263 - 16743316
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || |||||||||||| ||||||||||||| |||| |||||| ||||||    
T  16743263 aagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatg 16743316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 17835692 - 17835635
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaa 63  Q
    ||||| ||||| |||  |||||||||| ||||||||||||||||||||| ||| ||||    
T  17835692 gagaataagaatatctcgtgagtatgagagagaaagttgtcaaaaagttgttagaaaa 17835635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 29383622 - 29383589
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  29383622 atgtgagtatgagagagaaagttgtcaaaaagtt 29383589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 34570600 - 34570645
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||    
T  34570600 atgtgagtatgagagagaaagttgtcacaaaagttattacaaaatg 34570645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 7693395 - 7693339
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||| ||||| || |||||||||||| |||||||||||| ||||| |||| |||||    
T  7693395 gagaataagaatataatgtgagtatgagagagaaagttgttaaaaaattataataaa 7693339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 11635691 - 11635639
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    |||||||| || |||||||||||||||||||| | ||||| |||| |||||||    
T  11635691 aagaacataatttgagtatgaaagagaaagttattaaaaaattatcataaaat 11635639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 14803364 - 14803412
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| |||||||||||||||||| |||||| ||||||||    
T  14803364 gagaataaaaacataatgtgagtatgaaagagagagttgttaaaaagtt 14803412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 29173055 - 29173011
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||| |||||||| | |||||||||| ||||||||    
T  29173055 atgtgagtatgaaaaagaaagttattaaaaagttatcataaaatg 29173011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 29376706 - 29376754
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| ||||||||| ||||| |||||||||||| ||||||||    
T  29376706 gagaataagaagatcatgtgactatgatagagaaagttgttaaaaagtt 29376754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 17055 - 17007
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||    
T  17055 gagaataataacatcatgtgagtatgagagagaaagttgtcaaaaagtt 17007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 5924884 - 5924832
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||||||||||||||||||| ||||||||||||  |||| ||||||||||||    
T  5924884 aagaacatcatgtgagtatgagagagaaagttgtacaaaaattattataaaat 5924832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 10344398 - 10344346
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    |||| |||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  10344398 aagagcatcatgtgagtatgagagagaaagttgtccaaaaattattataaaat 10344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 1332471 - 1332518
Alignment:
Q  18 atcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||||    
T  1332471 atcatgtgaatatgaaagagaaagttgtcaaaaaattgttataaaatg 1332518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 6105436 - 6105475
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6105436 aacatcatgtgagtatgagagagaaagttgtcaaaaagtt 6105475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 9550398 - 9550457
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||||    
T  9550398 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatg 9550457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 29910204 - 29910259
Alignment:
Q  7 agaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    |||| ||||| || ||||||||||||||||||||||||||||||| |||| |||||    
T  29910204 agaataagaatataatgtgagtatgaaagagaaagttgtcaaaaaattataataaa 29910259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 35595284 - 35595245
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35595284 aagaacatcatgtgagtatgagagagaaagttgtcaaaaa 35595245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 39021434 - 39021493
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||| |||||||||||||||||| ||||||||||||||||| | ||||||    
T  39021434 gagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaagttatcacaaaatg 39021493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 14228787 - 14228737
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| ||||||||||||||||||||| ||||||||||||  |||||||||    
T  14228787 gagaataagaacatcatgtgagtatgagagagaaagttgtacaaaagttat 14228737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 37873105 - 37873155
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||| ||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  37873105 aacaacatatgagtatgacagagaaagttgtcaaaaagttatcataaaatg 37873155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 28623115 - 28623152
Alignment:
Q  19 tcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||| |||||||||||||||||||||||||||||||||    
T  28623115 tcatatgagtatgaaagagaaagttgtcaaaaagttat 28623152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 34970287 - 34970230
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaa 63  Q
    ||||| ||||| ||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  34970287 gagaataagaatatcttgtgagtatgagagagaaagttgtcaaaaagttgttacaaaa 34970230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 14531695 - 14531643
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||||||||| | ||||||||||||||||||||  ||||||||| |||||||    
T  14531695 aagaacatcatcttagtatgaaagagaaagttgtacaaaagttatcataaaat 14531643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 20473844 - 20473800
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||||||| || ||||||||||    
T  20473844 atgtgagtatgatagagaaagttgtcaaaaaattgttataaaatg 20473800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 29509334 - 29509298
Alignment:
Q  18 atcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||||||| |||||||||||||||||||||    
T  29509334 atcatgtgagtatgagagagaaagttgtcaaaaagtt 29509298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 43587721 - 43587673
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || |||||||||||||||||| ||||||| |||||||||||||    
T  43587721 gagaataacaacatcatgtgagtatgagagagaaaattgtcaaaaagtt 43587673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 6162028 - 6161969
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||| |||||||||||||||||| ||||||||||| ||| | ||||||||    
T  6162028 gagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatg 6161969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 9048307 - 9048366
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||| |||||||||||| ||||||| ||||||||||||| ||| ||||||    
T  9048307 gagaataaaaacataatgtgagtatgagagagaaaattgtcaaaaagttgttagaaaatg 9048366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 12659131 - 12659084
Alignment:
Q  7 agaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||| ||||| || |||||||||||| |||||||||||||||||||||    
T  12659131 agaacaagaatataatgtgagtatgagagagaaagttgtcaaaaagtt 12659084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 27630977 - 27630918
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||| || | ||||||||    
T  27630977 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtcataaaatg 27630918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 42012598 - 42012637
Alignment:
Q  23 gtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  42012598 gtgagtatgagagagaaagttgtcaaaaagttatcataaa 42012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 3756963 - 3756933
Alignment:
Q  24 tgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||||||||||||||||    
T  3756963 tgagtatgaaagagaaagttgtcaaaaagtt 3756933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 11114669 - 11114711
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttatt 57  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||    
T  11114669 aacataatgtgaatatgagagagaaagttgtcaaaaagttatt 11114711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 23754715 - 23754757
Alignment:
Q  24 tgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  23754715 tgagtatgaaagagaaagttgtcacaaaagttattaaaaaatg 23754757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 42716400 - 42716350
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||| ||||    
T  42716400 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaaattat 42716350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 5642396 - 5642429
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  5642396 atgtgagtatgagagagaaagttgtcaaaaagtt 5642429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 5644337 - 5644370
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  5644337 atgtgagtatgagagagaaagttgtcaaaaagtt 5644370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 11155898 - 11155939
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  11155898 atgtgagtatgagagagaaaattgtcaaaaagttataataaa 11155939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 11879496 - 11879529
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  11879496 atgtgagtatgagagagaaagttgtcaaaaagtt 11879529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 11896912 - 11896945
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  11896912 atgtgagtatgagagagaaagttgtcaaaaagtt 11896945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 14548820 - 14548873
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || |||||||||||| ||||||||||||| |||| |||||| ||||||    
T  14548820 aagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatg 14548873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 16808655 - 16808602
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || |||||||||||| | ||||||||||||||||||| ||| ||||||    
T  16808655 aagaagataatgtgagtatgagatagaaagttgtcaaaaagttgttagaaaatg 16808602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 30608708 - 30608757
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| |||||| |||||||||||||||| |||||||||| ||| |||||    
T  30608708 aacataatgtgaatatgaaagagaaagttatcaaaaagttgttaaaaaat 30608757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 33100474 - 33100519
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||    
T  33100474 atgtgagtatgagagagaaagttgtcacaaaagttgttataaaatg 33100519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 37210055 - 37210088
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  37210055 atgtgagtatgagagagaaagttgtcaaaaagtt 37210088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 40465021 - 40464980
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    |||||||||||| |||||||||||||||||| |||| |||||    
T  40465021 atgtgagtatgagagagaaagttgtcaaaaatttatcataaa 40464980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 43285968 - 43286013
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||    
T  43285968 atgtgagtatgagagagaaagttgtcacaaaagttattagaaaatg 43286013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 43602425 - 43602462
Alignment:
Q  17 catcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  43602425 catcatgtgagtctgaaagagcaagttgtcaaaaagtt 43602462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 43873682 - 43873727
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| || ||||| |||||||||||||||||| ||||||||||||    
T  43873682 gagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaa 43873727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 45101461 - 45101428
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  45101461 atgtgagtatgagagagaaagttgtcaaaaagtt 45101428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 324100 - 324132
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    |||||||||||| ||||||||||||||||||||    
T  324100 atgtgagtatgacagagaaagttgtcaaaaagt 324132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 24946082 - 24946034
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| |||||||||||| ||||||||||||||| |||||    
T  24946082 gagaataaaaacataatgtgagtatgagagagaaagttgtcaagaagtt 24946034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 27836244 - 27836212
Alignment:
Q  22 tgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||| ||||||||||||||||    
T  27836244 tgtgagtatgaaagagtaagttgtcaaaaagtt 27836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 35819002 - 35818958
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||||||| || ||| ||||||    
T  35819002 atgtgagtatgagagagaaagttgtcaaaaaattgttagaaaatg 35818958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 37562132 - 37562180
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| |||||| |||||||| ||||||||||||| |||||||    
T  37562132 gagaataagaatatcatgcgagtatgagagagaaagttgtctaaaagtt 37562180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 43403910 - 43403866
Alignment:
Q  7 agaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||| |||||||| |||| ||||||||||||| ||||||||||||    
T  43403910 agaataagaacataatgtaagtatgaaagagagagttgtcaaaaa 43403866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 6851650 - 6851698
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||    
T  6851650 gagaataacaacatcatgtgagtatgagagagaaagttgtcaaaaagtt 6851698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 36795804 - 36795752
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| || ||||||||||||||||||||||||||||||| |||| |||||||    
T  36795804 aagaatataatgtgagtatgaaagagaaagttgtcaaaaaattataataaaat 36795752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 31635807 - 31635860
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||||    
T  31635807 aagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatg 31635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 33857297 - 33857252
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  33857297 gagaataagaatatcatgtgagtatgagagagaaagttgtcaaaaa 33857252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 41868360 - 41868417
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaa 63  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| ||||    
T  41868360 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttaaaaaa 41868417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 42678626 - 42678581
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  42678626 gagaaaaagaacatcatgtgagtatgagagagaaagttgccaaaaa 42678581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 7497997 - 7498041
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||    
T  7497997 atgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatg 7498041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 35965654 - 35965610
Alignment:
Q  7 agaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||| ||||| || |||||||||||||||||||||||||||||||    
T  35965654 agaataagaatataatgtgagtatgaaagagaaagttgtcaaaaa 35965610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 42665803 - 42665851
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||||||    
T  42665803 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagtt 42665851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 4263861 - 4263900
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  4263861 aagaatataatgtgagtatgaaagagaaagttgtcaaaaa 4263900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 4723646 - 4723587
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||| |||||||||||| |||||||| ||| ||||||    
T  4723646 gagaataagaagataatgtgagtatgagagagaaagttgtaaaaaagttgttaaaaaatg 4723587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 27540086 - 27540047
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  27540086 aacatcatgtgagtatgagagaaaaagttgtcaaaaagtt 27540047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 23045155 - 23045121
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtta 55  Q
    |||||||||||| ||||||||||||||||||||||    
T  23045155 atgtgagtatgagagagaaagttgtcaaaaagtta 23045121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 36383536 - 36383494
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||||||||||||| ||||||||||||  |||||||    
T  36383536 aagaacatcatgtgagtatgagagagaaagttgtacaaaagtt 36383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 42141591 - 42141633
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||| |||||||||||||||| ||||||||||||| |||||||    
T  42141591 aagagcatcatgtgagtatgagagagaaagttgtccaaaagtt 42141633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 7086130 - 7086163
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  7086130 atgtgagtatgagagagaaagttgtcaaaaagtt 7086163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 12175328 - 12175369
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||||||| ||||||||| ||| |||||||||||||||||||    
T  12175328 aacatcatatgagtatgagagataaagttgtcaaaaagttat 12175369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 14797656 - 14797689
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  14797656 atgtgagtatgagagagaaagttgtcaaaaagtt 14797689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 29449277 - 29449232
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||    
T  29449277 atgtgagtatgagagagaaagttgtcataaaagttgttataaaatg 29449232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 36816416 - 36816465
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| |||||| ||||||||||| |||||||||||| |||| |||||||    
T  36816416 aacataatgtgaatatgaaagagagagttgtcaaaaaattatcataaaat 36816465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 42532744 - 42532789
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||    
T  42532744 atgtgagtatgagaaagaaagttgtcacaaaagttattataaaatg 42532789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 44484653 - 44484686
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgt 45  Q
    ||||||||||||||||||||| ||||||||||||    
T  44484653 aagaacatcatgtgagtatgagagagaaagttgt 44484686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 45372547 - 45372498
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    |||||||||||||||| | ||||||| |||| ||||||||||| ||||||    
T  45372547 aacatcatgtgagtataagagagaaaattgttaaaaagttattgtaaaat 45372498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 6639478 - 6639522
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||    
T  6639478 atgtgagtatgagagagaaagttgttaaaaagttgttagaaaatg 6639522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 6884984 - 6884940
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||| |||||||||||||||| ||||||||||||  |||||||||    
T  6884984 aagaccatcatgtgagtatgagagagaaagttgtataaaagttat 6884940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 8352909 - 8352857
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| || |||||||||||| ||||||| ||||| ||||||||||| |||||    
T  8352909 aagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaat 8352857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 9202522 - 9202566
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||| |||||||||||||||||||||||| || | ||||||||    
T  9202522 atgtgaatatgaaagagaaagttgtcaaaaaattgtcataaaatg 9202566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 11728112 - 11728160
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| |||||||||||||||||||||||||  |||||||    
T  11728112 gagaataaaaacataatgtgagtatgaaagagaaagttgtacaaaagtt 11728160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 13104563 - 13104511
Alignment:
Q  2 gagtgagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||| ||||  || |||| ||||||| |||||||||||||||||||||    
T  13104563 gagtgagaataagaggataatgtaagtatgagagagaaagttgtcaaaaagtt 13104511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18619388 - 18619436
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || ||||||||| || |||||||||||||||||||||    
T  18619388 gagaataagaatataatgtgagtacgagagagaaagttgtcaaaaagtt 18619436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 23344995 - 23345039
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||||    
T  23344995 atgtgaatatgagagagaaggttgtcaaaaagttgttataaaatg 23345039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 23358576 - 23358628
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| || |||||||||||| ||||||||||||| ||||||| ||| |||||    
T  23358576 aagaatataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaat 23358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 30339875 - 30339919
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||| | ||||||||||||||||||| | ||||||    
T  30339875 atgtgagtatgaaatataaagttgtcaaaaagttatcaaaaaatg 30339919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 30996793 - 30996761
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    |||||||||||| ||||||||||||||||||||    
T  30996793 atgtgagtatgagagagaaagttgtcaaaaagt 30996761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 36763521 - 36763565
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| || |||||||||||||||||||||||||  |||||||||    
T  36763521 aagaatataatgtgagtatgaaagagaaagttgtataaaagttat 36763565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 40496415 - 40496383
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    |||||||||||| ||||||||||||||||||||    
T  40496415 atgtgagtatgagagagaaagttgtcaaaaagt 40496383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 42081102 - 42081070
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagt 53  Q
    |||||||||||| ||||||||||||||||||||    
T  42081102 atgtgagtatgagagagaaagttgtcaaaaagt 42081070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 42554856 - 42554808
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||| ||||||||    
T  42554856 gagaataagaatataatgtgagtatgagagagaaagttgtaaaaaagtt 42554808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 4395 - 4336
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||| | ||||||||||||||||||||| ||||||||    
T  4395 gagaataagaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatg 4336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 41717530 - 41717471
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||| |||||||||||||||||| ||||||||||||||| | ||||||||    
T  41717530 gagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaagttgtcataaaatg 41717471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 41877759 - 41877720
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  41877759 aacatcatgtgagtatgagagagaaagttgtcaaaaagtt 41877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 47988476 - 47988534
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| |||||    
T  47988476 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaat 47988534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 47997763 - 47997821
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| |||||    
T  47997763 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaat 47997821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 48007050 - 48007108
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||||| ||| |||||    
T  48007050 gagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaat 48007108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 11056928 - 11056989
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattata-aaatgtcatttctctaaaaaa 81  Q
    |||||| |||||||||||||||||||||||| || || || |||| ||||||||||||||||    
T  11056928 atgtgaatatgaaagagaaagttgtcaaaaaattgttgtacaaatatcatttctctaaaaaa 11056989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 35554121 - 35554174
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattata-aaatgtcatttct 73  Q
    |||||||||||| |||||||||||||||||||| |||||| |||| ||||||||    
T  35554121 atgtgagtatgagagagaaagttgtcaaaaagtgattatacaaatatcatttct 35554174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 622466 - 622510
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||    
T  622466 atgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatg 622510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 43333676 - 43333720
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||    
T  43333676 atgtgagtatgaaagagagagttgtcaaaaagttgtcataaaatg 43333720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 43900748 - 43900796
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||||||    
T  43900748 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagtt 43900796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 7949862 - 7949823
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  7949862 aacatcatgtgagtatgagaaagaaagttgtcaaaaagtt 7949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 41369677 - 41369618
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||| ||| |||||||||||||||||| |||||| ||||||    
T  41369677 gagaataagaagataatgtgagtttgagagagaaagttgtcaaaaaattattagaaaatg 41369618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 50876362 - 50876429
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattata-aaatgtcatttctctaaaaaa 81  Q
    ||||| || ||||||||| |||||||||||||||||| || || || |||| ||||||||||||||||    
T  50876362 aacataatatgagtatgatagagaaagttgtcaaaaaattgttgtacaaatatcatttctctaaaaaa 50876429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 51032615 - 51032674
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || |||||||||||| ||||||| ||||||||||||| ||| ||||||    
T  51032615 gagaataagaagataatgtgagtatgagagagaaaattgtcaaaaagttgttagaaaatg 51032674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 51672928 - 51672893
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||||||||||||| |||||||||||||||||||||    
T  51672928 atgtgagtatgaaaaagaaagttgtcaaaaagttat 51672893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 55467038 - 55466979
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||| ||||||||||| |||||| |||||||||||| || ||||||||||    
T  55467038 gagaataaaaacataatgtgagtatgtaagagatagttgtcaaaaaattcttataaaatg 55466979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 2935502 - 2935552
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| ||||| || |||||||||||||||||||||||||  |||||||||    
T  2935502 gagaataagaagataatgtgagtatgaaagagaaagttgtacaaaagttat 2935552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 22153944 - 22153898
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaag 52  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||||    
T  22153944 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaag 22153898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 27162469 - 27162519
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||||||||| ||||||||||||  ||||||| ||| ||||||    
T  27162469 aacatcatgtgagtatgagagagaaagttgttcaaaagttgttacaaaatg 27162519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 35756054 - 35756005
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| ||||||||    
T  35756054 aacattatgtgagtatgaaagagaaagttgttaaaaa-ttatcataaaatg 35756005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 52678574 - 52678620
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttatta 58  Q
    ||||| || |||||| |||||||||||||||||||||||| ||||||    
T  52678574 aagaatataatgtgaatatgaaagagaaagttgtcaaaaaattatta 52678620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 6126519 - 6126486
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  6126519 atgtgagtatgagagagaaagttgtcaaaaagtt 6126486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 26279949 - 26279916
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  26279949 atgtgagtatgagagagaaagttgtcaaaaagtt 26279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 37303080 - 37303113
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  37303080 atgtgagtatgagagagaaagttgtcaaaaagtt 37303113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 37303448 - 37303415
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  37303448 atgtgagtatgagagagaaagttgtcaaaaagtt 37303415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 44334807 - 44334840
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  44334807 atgtgagtatgagagagaaagttgtcaaaaagtt 44334840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 48649645 - 48649612
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  48649645 atgtgagtatgagagagaaagttgtcaaaaagtt 48649612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 50146551 - 50146486
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattata-aaatgtcatttctcta 76  Q
    ||||||||||||| ||||||| ||||||| |||||| ||| | |||||| |||| |||||||||||    
T  50146551 aagaacatcatgtaagtatgagagagaaaattgtcacaaaatgattatacaaatatcatttctcta 50146486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 8066419 - 8066387
Alignment:
Q  22 tgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||| |||||||||||||||||||||    
T  8066419 tgtgagtatgagagagaaagttgtcaaaaagtt 8066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 25542971 - 25543007
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  25542971 aacattatgtgagtatgatagagaaagttgtcaaaaa 25543007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 32008113 - 32008065
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || ||| |||||||| |||||||||||||||||||||    
T  32008113 gagaataagaatataatgcgagtatgagagagaaagttgtcaaaaagtt 32008065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 40159835 - 40159887
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| || |||||||| ||| ||||||||||||||||||||| ||| |||||    
T  40159835 aagaagataatgtgagtctgagagagaaagttgtcaaaaagttgttagaaaat 40159887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 47849737 - 47849693
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||| ||||||||||||||||||| |||| | ||||||    
T  47849737 atgtgagtatgtaagagaaagttgtcaaaaaattatcacaaaatg 47849693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 53102893 - 53102941
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| |||| |||||||||||||||| ||||||||||||  |||||||    
T  53102893 gagaataagaccatcatgtgagtatgagagagaaagttgtataaaagtt 53102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 60548 - 60490
Alignment:
Q  7 agaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||| || |||||| ||||||||| ||||||||||||||||| | ||||||||    
T  60548 agaagaagaatataatgtgaatatgaaagaaaaagttgtcaaaaagttgtaataaaatg 60490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000009; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 31329123 - 31329173
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||||||    
T  31329123 aagaatataatgtgagtatgatagagaaagttgtcaaaaagttgttataaa 31329173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 4088509 - 4088464
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  4088509 atgtgagtatgaaagagaaagttgtcacaaaagttgttataaaatg 4088464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 19271933 - 19271880
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||| ||| ||||||    
T  19271933 aagaacatcatgtgagtatgagagagaaagttgtctaaacgttgttacaaaatg 19271880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 22920489 - 22920542
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||||||| ||||||||||||| |||| || ||| ||||||    
T  22920489 aagaacatcatgtgagtatgagagagaaagttgtccaaaatttgttacaaaatg 22920542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 31708432 - 31708391
Alignment:
Q  24 tgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  31708432 tgagtatgagagagaaagttgtcaaaaagttgttataaaatg 31708391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 32425025 - 32424972
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| || ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  32425025 aagaagataatgtgagtatgaaagagaaagttgttaaaaaattattagaaaatg 32424972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 41192671 - 41192622
Alignment:
Q  2 gagtgagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||||| | || |||||||||||||||||| ||||||||||||||||||    
T  41192671 gagtgaggataacaacatcatgtgagtatgagagagaaagttgtcaaaaa 41192622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 21023378 - 21023330
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||||||||||||    
T  21023378 gagaataagaaaataatgtgagtatgagagagaaagttgtcaaaaagtt 21023330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 36572771 - 36572723
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| |||||||||||||||||| |||||||||||||||    
T  36572771 gagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaagtt 36572723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 12417697 - 12417658
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  12417697 aacatcatgtgagtatgaaagagaaagttgttcaaaagtt 12417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 31006130 - 31006091
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  31006130 aacatcatgtaagtatgagagagaaagttgtcaaaaagtt 31006091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 2456106 - 2456048
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| ||||| || |||||||||||| | |||||||||||||||| || |||||||||    
T  2456106 gagaataagaatataatgtgagtatgagatagaaagttgtcaaaaaattgttataaaat 2456048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 8897453 - 8897403
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| |||||||||||||||||| ||||||||||| ||| | ||||||||    
T  8897453 aacataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatg 8897403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 14914446 - 14914404
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  14914446 aagaacatcatgtgaatatgtaagagaaagttgtccaaaagtt 14914404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 26627404 - 26627362
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || |||||||||||||||||||||||||| |||||||    
T  26627404 aagaatataatgtgagtatgaaagagaaagttgtctaaaagtt 26627362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 189708 - 189753
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||    
T  189708 atgtgagtatgagagagaaagttgtcacaaaagttatcataaaatg 189753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 6046378 - 6046345
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  6046378 atgtgagtatgagagagaaagttgtcaaaaagtt 6046345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 6538941 - 6538900
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| |||||| |||||||||||||||||||||||| ||||    
T  6538941 aacataatgtgaatatgaaagagaaagttgtcaaaaaattat 6538900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 6940155 - 6940200
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||    
T  6940155 atgtgagtatgagagagaaagttgtcacaaaaattattataaaatg 6940200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 10649501 - 10649456
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||    
T  10649501 atgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatg 10649456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 16292255 - 16292296
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    |||| |||||||||||||||||||| |||||||||| |||||    
T  16292255 atgtaagtatgaaagagaaagttgttaaaaagttatcataaa 16292296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 19481187 - 19481232
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaatg 65  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||    
T  19481187 atgtgagtatgagagagaaagttgtcacaaaagttatcataaaatg 19481232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 32873155 - 32873188
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  32873155 atgtgagtatgatagagaaagttgtcaaaaagtt 32873188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 33910079 - 33910124
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| ||||| || |||||||||||| ||||||||||||||||||    
T  33910079 gagaataagaatataatgtgagtatgagagagaaagttgtcaaaaa 33910124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 34381077 - 34381044
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  34381077 atgtgagtatgagagagaaagttgtcaaaaagtt 34381044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 36548382 - 36548419
Alignment:
Q  17 catcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  36548382 catcatgtgagtatgagagagaaagttgtcagaaagtt 36548419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 40223791 - 40223824
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  40223791 atgtgagtatgagagagaaagttgtcaaaaagtt 40223824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 2117615 - 2117663
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| |||||||||||||| ||||||    
T  2117615 gagaataagaatataatgtgagtatgagagagaaagttgtcacaaagtt 2117663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 3031914 - 3031866
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||||||||||||||||  |||||||    
T  3031914 gagaataagaagataatgtgagtatgaaagagaaagttgtacaaaagtt 3031866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3770997 - 3771045
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| |||||||| |||||||||||| |||||  ||||||||||||||    
T  3770997 gagaataagaacataatgtgagtatgagagagagggttgtcaaaaagtt 3771045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 9581645 - 9581609
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttat 56  Q
    ||||||||||||||||||||||||||| |||||||||    
T  9581645 atgtgagtatgaaagagaaagttgtcacaaaagttat 9581609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 11880984 - 11881036
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaat 64  Q
    ||||| || |||||||||||| ||||||||||||| ||||||| ||| |||||    
T  11880984 aagaagataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaat 11881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 12779597 - 12779645
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| || ||||| |||||||||||| ||| |||||||||||||||||    
T  12779597 gagaataaaaacataatgtgagtatgagagataaagttgtcaaaaagtt 12779645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 16553575 - 16553539
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    |||||||||||||||||| |||||||||||| |||||    
T  16553575 aacatcatgtgagtatgagagagaaagttgtaaaaaa 16553539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 17625859 - 17625799
Alignment:
Q  2 gagtgagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||||||| ||||  || | |||||||||| |||||| |||||||||||||||| |||||    
T  17625859 gagtgagaataagagtataacgtgagtatgagagagaatgttgtcaaaaagttatcataaa 17625799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 27340949 - 27340893
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaa 62  Q
    ||||| ||||| || |||||||||||| ||||||| |||||||||| |||| |||||    
T  27340949 gagaataagaatataatgtgagtatgagagagaaaattgtcaaaaaattataataaa 27340893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 39054658 - 39054622
Alignment:
Q  15 aacatcatgtgagtatgaaagagaaagttgtcaaaaa 51  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  39054658 aacataatgtgagtgtgaaagagaaagttgtcaaaaa 39054622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 39840700 - 39840748
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    ||||| ||||| || |||||||||||| ||||||| |||||||||||||    
T  39840700 gagaataagaatataatgtgagtatgagagagaaatttgtcaaaaagtt 39840748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 40364634 - 40364590
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtca-aaaagttattataaaat 64  Q
    |||||||||||| |||||||||||||| ||||||| |||||||||    
T  40364634 atgtgagtatgagagagaaagttgtcataaaagttgttataaaat 40364590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 155986 - 155927
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||| ||||| || ||||||||| || ||||||||||||||||||||| | ||||||||    
T  155986 gagaataagaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaaatg 155927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 31297 - 31348
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| ||| ||||||    
T  31297 aagaacatcatgtgagtatg--agagaaagttgtccaaaagttgttacaaaatg 31348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 18675 - 18625
Alignment:
Q  6 gagaagaagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    ||||| |||| |||||||||||||||| ||||||||||||  |||||||||    
T  18675 gagaataagaccatcatgtgagtatgagagagaaagttgtacaaaagttat 18625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 6882 - 6849
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagtt 54  Q
    |||||||||||| |||||||||||||||||||||    
T  6882 atgtgagtatgagagagaaagttgtcaaaaagtt 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 249139 - 249183
Alignment:
Q  12 aagaacatcatgtgagtatgaaagagaaagttgtcaaaaagttat 56  Q
    |||| |||||||||||||||| ||||||||||||  |||||||||    
T  249139 aagaccatcatgtgagtatgagagagaaagttgtacaaaagttat 249183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 6492 - 6448
Alignment:
Q  21 atgtgagtatgaaagagaaagttgtcaaaaagttattataaaatg 65  Q
    |||||||||||| |||||| |||||||||||||| | ||||||||    
T  6492 atgtgagtatgagagagaatgttgtcaaaaagttgtcataaaatg 6448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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