View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3237_low_146 (Length: 218)
Name: NF3237_low_146
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3237_low_146 |
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Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 3932647 - 3932463
Alignment:
| Q |
21 |
cacaatgccatggattttgaacatagctcaactcgactaacaaactactgtcaggtcggatacaatatacaatgccaatggttcccggtaccacatttcc |
120 |
Q |
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| T |
3932647 |
cacaatgccatggattttgaacatagctcaactcgactaacaaactactgtcaggtcggatacaatatacaatgccaatggttcctggtaccacatttcc |
3932548 |
T |
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| Q |
121 |
taatccatgctttgaagttgtaagggttggacgaacacgaacccaatctccaaccttgaactcctcaacccgttccatctctgct |
205 |
Q |
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| T |
3932547 |
taatccatgctttgaagttgtaagggttggacgaacacgaacccaatctccaaccttgaactcctcaacccgttccatctctgct |
3932463 |
T |
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