View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3237_low_149 (Length: 215)
Name: NF3237_low_149
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3237_low_149 |
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Alignment Details
Target: chr6 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 1922649 - 1922820
Alignment:
| Q |
25 |
cccgccaatataaaaatatcgcaaacatgtcattgtatttataaaatggccatatctgaataagaaaatggccaccttctttccaccacattcaaattga |
124 |
Q |
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| T |
1922649 |
cccgccaatataaaaatatcgcaaacatgtcattgtatttataaaatggccatatctgaataagaaaatggcgaccttcttcccaccacattcaaattga |
1922748 |
T |
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| Q |
125 |
aagagacgaaacttctaagtcctcacccttgcgtttataaatactctgaagtttttctctaaatgacacacac |
197 |
Q |
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|||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
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| T |
1922749 |
aagagacg-aacttctaagtcctcacccttgagtttataaatactctaaagtttttctctaaatgacacacac |
1922820 |
T |
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