View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3237_low_154 (Length: 204)
Name: NF3237_low_154
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3237_low_154 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 8900667 - 8900526
Alignment:
| Q |
50 |
ggacggtgtatttagatgggaaatgtttctaccaagaaaaaatgttactgttcttcttgttgaatctgatcgtgctactcggaggttaattacttcactt |
149 |
Q |
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| T |
8900667 |
ggacggtgtatttagatgggaaatgtttctaccaagaaaaaatgttactgttcttcttgttgaatctgatcgtgctactcggaggttaattacttcactt |
8900568 |
T |
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| Q |
150 |
ctcaataattgtcattacaaaggtaagtttatttttcttcat |
191 |
Q |
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| T |
8900567 |
ctaaataattgccattacaaaggtaagtttatttttcttcat |
8900526 |
T |
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