View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3237_low_65 (Length: 350)
Name: NF3237_low_65
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3237_low_65 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 4957481 - 4957159
Alignment:
| Q |
18 |
taaagcatttcatcatttcattaaattttggtcttcactttcaaaaggaaacttagaatgttcttctctttcattaccattacacaaaagggaaatcatt |
117 |
Q |
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| T |
4957481 |
taaagcatttcatcatttcattaaattttggtcttcactttcaaaaggaaacttagaatgttcttttctttcattaccattacacaaaagggaaatcatt |
4957382 |
T |
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| Q |
118 |
caagatccaaaaaaccttaaacaaagcaccttagaacaattatggaattatccaccaaaatcattagaatctactacctctacaaatgatcatgctgctt |
217 |
Q |
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| T |
4957381 |
caagatccaaaaaaccttaaacaaagcatcttagaacaactatggaatcatccaccaaaatcattagaatctactacctctacaaatgaccatgctgctt |
4957282 |
T |
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| Q |
218 |
ctagaaacaacatggttcgttatagatttaatttgacacgtcaccaagttgaaaatttaaagaaatgggtttttacaaaatgtcaaaatattggtcttga |
317 |
Q |
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| T |
4957281 |
ctagaaacaacattgttcgttatagatttaatttaacacgtcaccaagttgaaaatttgaagaaatgggttgttacaaaatgtcaaaatattggtcttga |
4957182 |
T |
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| Q |
318 |
aacatttcatttgtcaacctttg |
340 |
Q |
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| T |
4957181 |
aacatttcatttgtcaacctttg |
4957159 |
T |
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