View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3237_low_76 (Length: 326)
Name: NF3237_low_76
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3237_low_76 |
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Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 17327786 - 17328083
Alignment:
| Q |
17 |
accttgaaccaaggatttttagggcccttaagcataacaagaagaataacaaagttatgagtaaaagtcaaaaccccttcagcaatagcacctgtatgca |
116 |
Q |
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| T |
17327786 |
accttcaaccaaggatttttaggacccttaagcataacaagaagaataacaaagttatgagtaaaagtcaaaaccccttcagcaatagcacctgtatgca |
17327885 |
T |
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| Q |
117 |
aatcaaccttcaaagaaggacctttcaccatgtctttgtattctgttggtataacttgaaggatggatttgatgccaattgctccacctattgcttgagc |
216 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
17327886 |
aatcaaccttcaaagatggacctttcaccatgtctttgtattctgttggtataacttgaaggatggatttgatgccaatagctccacctattgcttgagc |
17327985 |
T |
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| Q |
217 |
aggaaaccttatggcaaaagatagaagagatgaatctggtcttagtcctaatgtatagaaggaaattgtggatgaagggttgaaactagcaccaccta |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |
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| T |
17327986 |
aggaaaccttatggcaaaagatagaagagatgaatctggtcttagtcctaatgtgtagaaggaaattgtggatgaagggttaaaactagcaccaccta |
17328083 |
T |
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