View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3237_low_87 (Length: 289)

Name: NF3237_low_87
Description: NF3237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3237_low_87
NF3237_low_87
[»] chr1 (50 HSPs)
chr1 (94-213)||(45969669-45969785)
chr1 (10-87)||(50754729-50754806)
chr1 (10-86)||(28739389-28739465)
chr1 (10-86)||(28045325-28045400)
chr1 (10-68)||(9379842-9379900)
chr1 (10-68)||(9884865-9884923)
chr1 (10-64)||(15928150-15928204)
chr1 (39-95)||(10449445-10449501)
chr1 (10-68)||(6539635-6539693)
chr1 (39-93)||(44801751-44801805)
chr1 (56-94)||(28045449-28045487)
chr1 (39-93)||(44938794-44938848)
chr1 (56-93)||(50754854-50754891)
chr1 (229-289)||(51942309-51942368)
chr1 (25-84)||(44291056-44291115)
chr1 (229-286)||(6702590-6702647)
chr1 (31-68)||(4579192-4579229)
chr1 (56-93)||(9379948-9379985)
chr1 (229-286)||(10664794-10664850)
chr1 (39-76)||(28810065-28810102)
chr1 (64-97)||(34026748-34026781)
chr1 (229-289)||(42490406-42490466)
chr1 (229-289)||(48638546-48638606)
chr1 (229-289)||(50746725-50746785)
chr1 (56-96)||(44381905-44381945)
chr1 (58-93)||(15928073-15928108)
chr1 (39-86)||(28928785-28928832)
chr1 (12-47)||(41526193-41526228)
chr1 (58-96)||(9884973-9885011)
chr1 (229-286)||(14349658-14349715)
chr1 (229-286)||(18467197-18467254)
chr1 (229-286)||(18534015-18534072)
chr1 (231-288)||(23233967-23234024)
chr1 (56-94)||(28739303-28739341)
chr1 (229-286)||(32594265-32594322)
chr1 (12-92)||(45215163-45215244)
chr1 (229-285)||(2556570-2556626)
chr1 (256-289)||(3311548-3311581)
chr1 (229-289)||(3767969-3768030)
chr1 (12-65)||(10449526-10449579)
chr1 (229-289)||(21265670-21265730)
chr1 (229-289)||(33033140-33033200)
chr1 (229-289)||(33207219-33207279)
chr1 (229-289)||(35605619-35605679)
chr1 (229-289)||(37662553-37662613)
chr1 (229-289)||(44732647-44732707)
chr1 (12-65)||(44938872-44938925)
chr1 (41-93)||(593824-593876)
chr1 (231-286)||(30360428-30360483)
chr1 (253-289)||(32711168-32711204)
[»] chr7 (39 HSPs)
chr7 (10-86)||(17272705-17272781)
chr7 (13-86)||(7211866-7211939)
chr7 (10-78)||(7211974-7212042)
chr7 (12-86)||(25099327-25099401)
chr7 (21-81)||(29681776-29681836)
chr7 (10-86)||(46282874-46282951)
chr7 (39-86)||(32315713-32315760)
chr7 (56-93)||(29681903-29681940)
chr7 (56-91)||(17272829-17272864)
chr7 (25-84)||(32315790-32315849)
chr7 (229-286)||(15106690-15106747)
chr7 (229-286)||(31769511-31769568)
chr7 (229-286)||(47641059-47641116)
chr7 (229-289)||(3392481-3392541)
chr7 (13-86)||(4911698-4911771)
chr7 (233-289)||(9497984-9498040)
chr7 (229-289)||(9712194-9712254)
chr7 (229-289)||(10244885-10244945)
chr7 (229-289)||(24188484-24188544)
chr7 (25-65)||(6980948-6980988)
chr7 (255-287)||(35135623-35135655)
chr7 (25-65)||(42494799-42494839)
chr7 (229-286)||(2681110-2681167)
chr7 (229-286)||(12640588-12640645)
chr7 (229-278)||(30004556-30004605)
chr7 (229-286)||(30388506-30388563)
chr7 (229-286)||(35950142-35950199)
chr7 (229-286)||(36391903-36391960)
chr7 (229-289)||(1563735-1563795)
chr7 (229-289)||(9877263-9877323)
chr7 (233-289)||(16200577-16200633)
chr7 (229-285)||(21066900-21066956)
chr7 (229-289)||(23102554-23102614)
chr7 (39-96)||(29053399-29053456)
chr7 (229-281)||(41084053-41084105)
chr7 (12-65)||(43500011-43500064)
chr7 (229-280)||(12772129-12772180)
chr7 (41-89)||(29407496-29407544)
chr7 (219-278)||(42548035-42548094)
[»] chr3 (51 HSPs)
chr3 (10-86)||(11512393-11512469)
chr3 (10-84)||(31342015-31342089)
chr3 (10-86)||(22893975-22894051)
chr3 (10-64)||(20286932-20286986)
chr3 (39-94)||(48342785-48342840)
chr3 (229-286)||(7938295-7938352)
chr3 (56-95)||(22893889-22893928)
chr3 (39-86)||(29081704-29081751)
chr3 (229-286)||(13638244-13638301)
chr3 (218-286)||(4200584-4200652)
chr3 (43-92)||(32385358-32385407)
chr3 (11-78)||(20496553-20496619)
chr3 (56-94)||(11512517-11512555)
chr3 (43-93)||(31342116-31342165)
chr3 (12-74)||(36738279-36738341)
chr3 (45-94)||(36738372-36738421)
chr3 (12-86)||(48342214-48342296)
chr3 (229-289)||(48739740-48739800)
chr3 (229-289)||(52309106-52309166)
chr3 (229-289)||(53163608-53163668)
chr3 (229-289)||(54021331-54021390)
chr3 (43-94)||(20287013-20287063)
chr3 (23-66)||(29081625-29081668)
chr3 (39-86)||(33689261-33689308)
chr3 (229-287)||(48546187-48546245)
chr3 (229-286)||(19999881-19999938)
chr3 (40-86)||(20496489-20496535)
chr3 (229-286)||(22501930-22501987)
chr3 (229-286)||(28689671-28689728)
chr3 (229-286)||(47098746-47098803)
chr3 (56-86)||(49159509-49159539)
chr3 (231-288)||(51772905-51772962)
chr3 (229-286)||(53347289-53347346)
chr3 (24-65)||(16205736-16205777)
chr3 (229-289)||(17602672-17602732)
chr3 (56-93)||(25790904-25790941)
chr3 (231-276)||(29825120-29825164)
chr3 (229-289)||(30779563-30779623)
chr3 (229-289)||(34102607-34102667)
chr3 (229-289)||(34898763-34898823)
chr3 (229-289)||(39719949-39720009)
chr3 (229-289)||(41936403-41936463)
chr3 (12-65)||(48342865-48342918)
chr3 (229-289)||(53432733-53432793)
chr3 (229-289)||(4236976-4237035)
chr3 (57-89)||(5633181-5633213)
chr3 (231-278)||(8762087-8762134)
chr3 (229-280)||(11820018-11820069)
chr3 (28-68)||(17546997-17547037)
chr3 (218-289)||(29098695-29098766)
chr3 (229-288)||(34847557-34847616)
[»] chr6 (32 HSPs)
chr6 (12-86)||(2543821-2543895)
chr6 (13-93)||(369498-369578)
chr6 (12-86)||(11448063-11448137)
chr6 (39-93)||(16193834-16193888)
chr6 (41-93)||(28581731-28581783)
chr6 (25-81)||(2980786-2980842)
chr6 (56-95)||(2543733-2543772)
chr6 (229-286)||(7072092-7072149)
chr6 (229-286)||(19892275-19892332)
chr6 (232-289)||(33646851-33646909)
chr6 (25-66)||(178660-178701)
chr6 (229-289)||(1969010-1969070)
chr6 (229-289)||(3294778-3294838)
chr6 (56-93)||(11448187-11448224)
chr6 (229-288)||(22997350-22997409)
chr6 (229-288)||(23790992-23791051)
chr6 (39-86)||(10521855-10521902)
chr6 (229-264)||(31803617-31803652)
chr6 (229-286)||(6210068-6210125)
chr6 (229-286)||(10483535-10483592)
chr6 (229-286)||(31935113-31935170)
chr6 (229-286)||(34432796-34432853)
chr6 (15-80)||(35049750-35049816)
chr6 (229-280)||(3196633-3196686)
chr6 (229-289)||(7177309-7177369)
chr6 (12-65)||(16193757-16193810)
chr6 (229-289)||(26669683-26669743)
chr6 (229-289)||(30704974-30705034)
chr6 (10-66)||(1879187-1879243)
chr6 (57-93)||(5150619-5150655)
chr6 (229-280)||(8857104-8857155)
chr6 (253-289)||(11049687-11049723)
[»] chr2 (37 HSPs)
chr2 (10-86)||(7755342-7755418)
chr2 (10-68)||(39819087-39819145)
chr2 (21-84)||(15562212-15562275)
chr2 (10-68)||(12918557-12918615)
chr2 (17-86)||(13421772-13421841)
chr2 (12-92)||(34563326-34563406)
chr2 (229-286)||(30392831-30392888)
chr2 (56-93)||(12918663-12918700)
chr2 (56-93)||(39819193-39819230)
chr2 (229-286)||(40363070-40363127)
chr2 (229-289)||(5398103-5398163)
chr2 (229-289)||(2806498-2806557)
chr2 (44-96)||(5095746-5095798)
chr2 (58-94)||(7755459-7755495)
chr2 (39-95)||(15011365-15011421)
chr2 (25-65)||(18182591-18182631)
chr2 (16-68)||(30610238-30610290)
chr2 (228-286)||(38387676-38387734)
chr2 (229-286)||(1500975-1501032)
chr2 (229-286)||(3438962-3439019)
chr2 (229-286)||(8250300-8250357)
chr2 (56-93)||(12918498-12918536)
chr2 (229-286)||(19612729-19612786)
chr2 (229-286)||(22653643-22653700)
chr2 (229-286)||(29449462-29449519)
chr2 (39-68)||(5095818-5095847)
chr2 (57-86)||(5913522-5913551)
chr2 (229-289)||(11050753-11050813)
chr2 (233-286)||(27913469-27913521)
chr2 (230-286)||(29772277-29772333)
chr2 (229-289)||(33228929-33228989)
chr2 (229-289)||(44187714-44187775)
chr2 (229-280)||(4183190-4183241)
chr2 (39-95)||(6217309-6217365)
chr2 (229-280)||(8742829-8742880)
chr2 (229-288)||(30390366-30390425)
chr2 (218-286)||(33563209-33563276)
[»] chr5 (34 HSPs)
chr5 (12-86)||(9177923-9177997)
chr5 (12-84)||(23219360-23219432)
chr5 (10-64)||(1839999-1840053)
chr5 (10-86)||(5215645-5215722)
chr5 (16-68)||(29385367-29385419)
chr5 (39-94)||(12605660-12605715)
chr5 (11-93)||(896268-896350)
chr5 (23-77)||(42772054-42772108)
chr5 (10-68)||(19417469-19417527)
chr5 (35-84)||(25879406-25879455)
chr5 (12-68)||(7137665-7137721)
chr5 (12-63)||(36568733-36568785)
chr5 (49-93)||(41287997-41288041)
chr5 (56-93)||(5215560-5215597)
chr5 (229-289)||(8241064-8241124)
chr5 (229-289)||(12891571-12891631)
chr5 (229-280)||(31074132-31074183)
chr5 (218-289)||(41930108-41930179)
chr5 (229-276)||(6414082-6414128)
chr5 (10-73)||(31848177-31848239)
chr5 (229-287)||(9125677-9125734)
chr5 (229-286)||(11897262-11897319)
chr5 (229-286)||(25729439-25729496)
chr5 (56-86)||(29385416-29385446)
chr5 (229-286)||(36888394-36888451)
chr5 (233-282)||(16210934-16210982)
chr5 (67-96)||(27696263-27696292)
chr5 (231-286)||(2328608-2328663)
chr5 (218-277)||(4153550-4153609)
chr5 (229-285)||(5900306-5900361)
chr5 (13-65)||(12605582-12605634)
chr5 (39-79)||(22097488-22097528)
chr5 (233-288)||(26912851-26912906)
chr5 (253-288)||(32252944-32252980)
[»] chr4 (49 HSPs)
chr4 (10-68)||(31846867-31846925)
chr4 (10-66)||(6607471-6607527)
chr4 (35-89)||(53261093-53261147)
chr4 (16-84)||(54223561-54223629)
chr4 (12-67)||(31012152-31012207)
chr4 (26-79)||(38324924-38324977)
chr4 (39-83)||(30023650-30023694)
chr4 (15-66)||(6608375-6608426)
chr4 (12-86)||(11392307-11392379)
chr4 (229-289)||(40051636-40051696)
chr4 (11-68)||(43063542-43063599)
chr4 (229-286)||(13161761-13161818)
chr4 (39-93)||(36273062-36273116)
chr4 (218-276)||(44195634-44195691)
chr4 (25-66)||(9712943-9712984)
chr4 (229-289)||(13578461-13578521)
chr4 (233-289)||(23778821-23778877)
chr4 (229-289)||(42381109-42381169)
chr4 (229-289)||(54215775-54215835)
chr4 (43-95)||(6607393-6607444)
chr4 (229-288)||(17815422-17815481)
chr4 (25-65)||(22435379-22435419)
chr4 (229-283)||(3764010-3764064)
chr4 (58-93)||(31012259-31012294)
chr4 (58-93)||(31846782-31846817)
chr4 (15-78)||(41306689-41306752)
chr4 (229-280)||(52798292-52798342)
chr4 (218-289)||(56479223-56479293)
chr4 (229-286)||(4958555-4958612)
chr4 (229-286)||(10417220-10417277)
chr4 (40-86)||(30023489-30023535)
chr4 (56-86)||(31846922-31846952)
chr4 (43-89)||(33380606-33380652)
chr4 (229-286)||(47890709-47890766)
chr4 (229-286)||(48569175-48569232)
chr4 (229-289)||(1439632-1439692)
chr4 (229-289)||(8965108-8965168)
chr4 (229-289)||(21935491-21935551)
chr4 (229-289)||(30057236-30057296)
chr4 (58-91)||(32008369-32008402)
chr4 (229-289)||(32339338-32339398)
chr4 (229-289)||(34353793-34353853)
chr4 (233-286)||(42073177-42073229)
chr4 (229-289)||(43905724-43905784)
chr4 (229-289)||(49901496-49901556)
chr4 (20-64)||(2254564-2254608)
chr4 (231-286)||(25235796-25235851)
chr4 (233-280)||(33530811-33530858)
chr4 (58-86)||(54613030-54613058)
[»] chr8 (44 HSPs)
chr8 (10-66)||(43465112-43465168)
chr8 (35-80)||(45051339-45051384)
chr8 (45-89)||(33763461-33763505)
chr8 (229-286)||(44673647-44673704)
chr8 (56-93)||(1605045-1605082)
chr8 (237-289)||(2294095-2294147)
chr8 (229-289)||(24790320-24790380)
chr8 (229-289)||(26192712-26192772)
chr8 (12-65)||(31470771-31470824)
chr8 (229-280)||(9187228-9187279)
chr8 (229-280)||(14582445-14582495)
chr8 (229-286)||(1632439-1632496)
chr8 (39-93)||(4531848-4531902)
chr8 (229-286)||(7765657-7765714)
chr8 (15-65)||(7931605-7931655)
chr8 (229-286)||(12548061-12548118)
chr8 (229-286)||(16449139-16449196)
chr8 (56-94)||(16687511-16687549)
chr8 (229-286)||(26022261-26022318)
chr8 (15-65)||(33763539-33763589)
chr8 (229-286)||(34472311-34472368)
chr8 (229-286)||(36540301-36540358)
chr8 (229-286)||(38219567-38219624)
chr8 (229-286)||(38955193-38955250)
chr8 (229-286)||(42880962-42881019)
chr8 (56-94)||(43465219-43465257)
chr8 (229-278)||(43656050-43656099)
chr8 (229-286)||(3189950-3190005)
chr8 (229-289)||(7453366-7453426)
chr8 (229-289)||(8034408-8034468)
chr8 (229-289)||(8698576-8698636)
chr8 (230-286)||(8953868-8953924)
chr8 (229-289)||(10083177-10083237)
chr8 (229-289)||(22274607-22274667)
chr8 (229-289)||(27077093-27077153)
chr8 (39-68)||(31470849-31470878)
chr8 (229-286)||(32719607-32719663)
chr8 (229-289)||(34894383-34894443)
chr8 (229-289)||(38745274-38745335)
chr8 (229-289)||(39362279-39362339)
chr8 (229-286)||(40249212-40249268)
chr8 (229-289)||(44444558-44444618)
chr8 (229-289)||(17467289-17467348)
chr8 (261-289)||(25824898-25824926)
[»] scaffold1315 (1 HSPs)
scaffold1315 (39-86)||(1819-1866)
[»] scaffold1293 (1 HSPs)
scaffold1293 (39-86)||(205-252)
[»] scaffold0275 (1 HSPs)
scaffold0275 (229-280)||(8835-8885)
[»] scaffold0445 (1 HSPs)
scaffold0445 (229-286)||(4013-4070)
[»] scaffold0343 (2 HSPs)
scaffold0343 (12-65)||(12285-12338)
scaffold0343 (57-93)||(12226-12262)
[»] scaffold0110 (1 HSPs)
scaffold0110 (39-92)||(26500-26553)
[»] scaffold0330 (1 HSPs)
scaffold0330 (218-281)||(6771-6834)
[»] scaffold0121 (1 HSPs)
scaffold0121 (229-286)||(46540-46597)
[»] scaffold0001 (1 HSPs)
scaffold0001 (10-68)||(507740-507798)
[»] scaffold0119 (1 HSPs)
scaffold0119 (229-289)||(1050-1110)
[»] scaffold0088 (1 HSPs)
scaffold0088 (229-289)||(10822-10882)
[»] scaffold0460 (1 HSPs)
scaffold0460 (229-288)||(13200-13259)


Alignment Details
Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 45969785 - 45969669
Alignment:
Q  94 cttcaggatgttctcgggacaatacttgtcgctagatatagcacctctcttttgacattaaatacagaattagttttgttacaaacaacttaattgtata 193  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  45969785 cttcaggatgttctcgggacaatacttgtcgctagata---cacctctcttttgacattaagtacagaatgagttttgttacaaacaacttaattgtata 45969689  T
Q  194 cattaaaataggtaccggta 213  Q
     ||||||||||||| |||||    
T  45969688 tattaaaataggtatcggta 45969669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 50754806 - 50754729
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagta 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50754806 tcttgtaaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcaccaaagta 50754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 28739389 - 28739465
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28739389 tcttgtaaaagaaaaagaaaaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 28739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 28045400 - 28045325
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  28045400 tcttgttaaagaaaaagaagaaagccacttgtgacattatggttggccaat-tcaccaaccacaatgtcacccaagt 28045325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 9379900 - 9379842
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9379900 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatatcaccaa 9379842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 9884923 - 9884865
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9884923 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttgaccaatgtcaccaa 9884865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 15928150 - 15928204
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtca 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15928150 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtca 15928204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 10449501 - 10449445
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccct 95  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10449501 tgtgacattgtggttggtcaatgtcaccaaccacaatgtcacccaagtattatccct 10449445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 6539635 - 6539693
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  6539635 tcttgtgaaagaaaaagaagaaagtcacatgtgacattgtggttgaccaatgtcaccaa 6539693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 44801805 - 44801751
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  44801805 tgtgacattgtggttggccaatgtcatcaaccacaatatcacctaagtattatcc 44801751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 28045449 - 28045487
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28045449 ccaatgtcaccaaccacaatgtcacccaagtattatccc 28045487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 44938848 - 44938794
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||    
T  44938848 tgtgacattctggttggtcaatgtcactaaccacaatgtcacccaagtgttatcc 44938794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 50754854 - 50754891
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50754854 ccaatgtcaccaaccacaatgtcacccaagtattatcc 50754891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 51942309 - 51942368
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||  |||||||||||||||||||| ||||||||    
T  51942309 tcagttggtagggatattgcatatt-atatacagggtcggggttcgaaccccggacacccc 51942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 44291115 - 44291056
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaa 84  Q
    ||||||||| || |||||| ||||||||||| || |||||||||||||| ||||||||||    
T  44291115 agaagaaagtcatatgtgatattgtggttggtcagtgtcaccaaccacattgtcacccaa 44291056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 6702590 - 6702647
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  6702590 tcagttggtagggatattgcatatt-atatgcaggagtcggggttcgaaccccagacac 6702647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 4579229 - 4579192
Alignment:
Q  31 aagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  4579229 aagccacttgtgacattgtggttggccaatgtcaccaa 4579192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 9379948 - 9379985
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9379948 ccaatgtcaccaaccacaatgtcacccaaatattatcc 9379985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 10664850 - 10664794
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| || ||||||||||||||||| |||||    
T  10664850 tcagttggtagggatattgcatatt-atatgcagagtcggggttcgaaccccggacac 10664794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 28810065 - 28810102
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatg 76  Q
    |||||||||||||||| |||||||||||||||||||||    
T  28810065 tgtgacattgtggttgaccaatgtcaccaaccacaatg 28810102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 34026781 - 34026748
Alignment:
Q  64 accaaccacaatgtcacccaagtattatcccttc 97  Q
    ||||||||||||||||||||||||||||||||||    
T  34026781 accaaccacaatgtcacccaagtattatcccttc 34026748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 42490466 - 42490406
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||| |||| |||||||||||||||| ||||||||    
T  42490466 tcagttggtagggatattgcatatt-atatgcaggggtcggggttcgaaccccggacacccc 42490406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 48638546 - 48638606
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| ||| |||||||| |||| | |||||||||||||||||||||||    
T  48638546 tcagttggtagggatattgcat-tttatatgcaggggctggggttcgaaccccagacacccc 48638606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 50746725 - 50746785
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtag-ggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||| ||||| |||||||||| ||||||| |||||||||| ||||||||    
T  50746725 tcagttggtagggatatcacata-ttatatgtagaggtcgggattcgaaccccggacacccc 50746785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 44381945 - 44381905
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccctt 96  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  44381945 ccaatatcaccaaccacaatgtcacccaaatattatccctt 44381905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 15928108 - 15928073
Alignment:
Q  58 aatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15928108 aatgtcaccaatcacaatgtcacccaagtattatcc 15928073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 28928832 - 28928785
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||| ||||||||||||||||| | | |||||||||||||    
T  28928832 tgtgacattgtgattggccaatgtcaccaaactctatgtcacccaagt 28928785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 41526228 - 41526193
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacatt 47  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41526228 ttgtgaaagaaaaagaagaaagcaacatgtgacatt 41526193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 9884973 - 9885011
Alignment:
Q  58 aatgtcaccaaccacaatgtcacccaagtattatccctt 96  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  9884973 aatgtcaccaaccacaatatcacccaagtatcatccctt 9885011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 14349658 - 14349715
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    ||||||||||| |||||| |||||| |||||||||| |||||||||||||||| |||||    
T  14349658 tcagttggtagagatattgcatatt-atatgtagggatcggggttcgaaccccggacac 14349715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 18467254 - 18467197
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  18467254 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 18467197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 18534015 - 18534072
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    ||||||||||| |||||| |||||| ||||||||| ||||||||||||||||| |||||    
T  18534015 tcagttggtagagatattgcatatt-atatgtaggagtcggggttcgaaccccggacac 18534072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 23233967 - 23234024
Alignment:
Q  231 agttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacaccc 288  Q
    |||||| ||||||||| |||||| ||||| |||| ||||||||||||||||||||||||    
T  23233967 agttggcagggatattgcatatt-atatgcaggggtcggggttcgaaccccagacaccc 23234024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 28739341 - 28739303
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  28739341 ccaatatcaccaaccacaatatcacccaagtattatccc 28739303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 32594265 - 32594322
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  32594265 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 32594322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 45215244 - 45215163
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagcca---catgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatc 92  Q
    |||||||||| |||||||||| |||   | |||||||||||||||| |||||||  | ||||||||| |||||||||| |||||    
T  45215244 ttgtgaaagagaaagaagaaatccatcacttgtgacattgtggttgaccaatgt--cgaaccacaatatcacccaagtgttatc 45215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 2556570 - 2556626
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagaca 285  Q
    |||||||||||||||||| |||| ||||||| |||| | |||||||||||||||||||    
T  2556570 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagaca 2556626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 3311548 - 3311581
Alignment:
Q  256 tatgtagggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||||||||||| ||||||||    
T  3311548 tatgtagggtcggggttcgaaccccggacacccc 3311581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 3768030 - 3767969
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||||||||| | |||| ||||||||||  || ||||||||    
T  3768030 tcagttggtagggatattgcatatttatatgcaggggttggggttcgaattccggacacccc 3767969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 10449526 - 10449579
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    |||||||||| |||||||||||  |  |||||||||||||||| ||||||||||    
T  10449526 ttgtgaaagagaaagaagaaagatatttgtgacattgtggttgaccaatgtcac 10449579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 21265670 - 21265730
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  21265670 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 21265730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 33033140 - 33033200
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| ||||  |||||||||||||| |||||||||    
T  33033140 tcagttggtagggatattgcata-ttatatgcagggaccggggttcgaaccctagacacccc 33033200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 33207219 - 33207279
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  33207219 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 33207279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 35605679 - 35605619
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | |||||||||||||||||| | |||||||    
T  35605679 tcagttggtagggatattgcata-ttatatgcaggggtcggggttcgaaccctaaacacccc 35605619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 37662613 - 37662553
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | |||||||||| |||||||| ||||||||    
T  37662613 tcagttggtagggatattgcata-ttatatgcaggggtcggggtacgaaccccggacacccc 37662553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 44732647 - 44732707
Alignment:
Q  229 tcagttggtagggatattacatatttatatg-tagggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| |||||||  |||| ||||||||||||||| ||||||||    
T  44732647 tcagttggtagggatattgcata-ttatatgcaagggccggggttcgaaccccggacacccc 44732707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 44938872 - 44938925
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    |||||||||| ||||||||||||||| |||  |||||||||||  |||||||||    
T  44938872 ttgtgaaagagaaagaagaaagccacttgtaccattgtggttgttcaatgtcac 44938925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 593824 - 593876
Alignment:
Q  41 tgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||  ||||| | |||||| | |||||||||||||||||||||    
T  593824 tgacattgtggttaaccaatattaccaactataatgtcacccaagtattatcc 593876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 30360428 - 30360483
Alignment:
Q  231 agttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    ||||||||| |||||| ||| ||||||||||||| |||||||||||||||| |||||    
T  30360428 agttggtagagatattgcat-tttatatgtaggggtcggggttcgaaccccggacac 30360483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 32711204 - 32711168
Alignment:
Q  253 ttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  32711204 ttatatgcagggccggggttcgaaccccagacacccc 32711168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 9e-36; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 17272781 - 17272705
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17272781 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 17272705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 7211939 - 7211866
Alignment:
Q  13 tgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7211939 tgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 7211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 7211974 - 7212042
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtc 78  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  7211974 tcttgtgaaagaaaaagaagaaagtcacatgtgacattgtggttggccaatgtctcccaccacaatgtc 7212042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 25099327 - 25099401
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  25099327 ttgtgaaagaaaaagaagaaagacacttgtgacattgtggttgaccaaagtcaccaaccacaatttcactcaagt 25099401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 29681836 - 29681776
Alignment:
Q  21 aaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacc 81  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29681836 aaaaaaaaaaaagccacatgtgacgttgtggttggccaatgtcaccaaccacaatgtcacc 29681776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 46282951 - 46282874
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaag-ccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||| ||||||||||  |||| ||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  46282951 tcttgtgaaagagaaagaagaaaaaccacttgtgatattgtggttggccaatgtcaccaactacaatgtcactcaagt 46282874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 32315760 - 32315713
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  32315760 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacgcaagt 32315713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 29681903 - 29681940
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29681903 ccaatgtcaccaaccacaatgtcacccaagtattatcc 29681940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 91
Target Start/End: Original strand, 17272829 - 17272864
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattat 91  Q
    ||||||||||||||||||||||||||||||||||||    
T  17272829 ccaatgtcaccaaccacaatgtcacccaagtattat 17272864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 32315790 - 32315849
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaa 84  Q
    ||||||||||||| | ||||||||| |||| |||||||||||||||||||| | ||||||    
T  32315790 agaagaaagccacttctgacattgtagttgaccaatgtcaccaaccacaatttgacccaa 32315849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 15106747 - 15106690
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  15106747 tcagttggtagggatattgcatatt-atatgcaggagtcggggttcgaaccccagacac 15106690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 31769568 - 31769511
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  31769568 tcagttggtagggatattgcatatt-atatgcaggagtcggggttcgaaccccagacac 31769511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 47641059 - 47641116
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| |||||||||||| | ||||||||||||||||||||    
T  47641059 tcagttggtagggatattgcata-ttatatgtaggggctggggttcgaaccccagacac 47641116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 3392481 - 3392541
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    ||||||| || ||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  3392481 tcagttgatatggatattgcatatt-atatgtaggggtcggggttcgaaccccagacacccc 3392541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 4911698 - 4911771
Alignment:
Q  13 tgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||||||| ||||||||||  ||| ||||||||| | |||| ||||| ||||| | |||||||||||||||||    
T  4911698 tgtgaaagagaaagaagaaattcacctgtgacattatagttgaccaatatcaccgatcacaatgtcacccaagt 4911771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 9497984 - 9498040
Alignment:
Q  233 ttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||| ||||||||    
T  9497984 ttggtagggatattgcatatt-atatgtaggggtcggggttcgaaccccggacacccc 9498040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 9712254 - 9712194
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||| |||| |||||||||||||||| ||||||||    
T  9712254 tcagttggtagggatattgcatatt-atatgcaggggtcggggttcgaaccccggacacccc 9712194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 10244945 - 10244885
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||||||| ||||||||    
T  10244945 tcagttggtagggatattgcata-ttatatgtaggagccggggttcgaaccccggacacccc 10244885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 24188484 - 24188544
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||| | |||||| ||||| |||| |||||||||||||||||||||||||    
T  24188484 tcagttggtagggatactgcatatt-atatgcaggggtcggggttcgaaccccagacacccc 24188544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 6980948 - 6980988
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  6980948 agaagaaagccacttgtaacattgtggttggccaatgtcac 6980988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 35135655 - 35135623
Alignment:
Q  255 atatgtagggtcggggttcgaaccccagacacc 287  Q
    |||||||||||||||||||||||||||||||||    
T  35135655 atatgtagggtcggggttcgaaccccagacacc 35135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 42494839 - 42494799
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  42494839 agaagaaagccacttgtgacattgtggtttgccaatgtcac 42494799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 2681110 - 2681167
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  2681110 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 2681167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 12640645 - 12640588
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| ||| | |||||||||||||||||||||    
T  12640645 tcagttggtagggatattgcatatt-atatgcaggagccggggttcgaaccccagacac 12640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 30004605 - 30004556
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaacc 278  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  30004605 tcagttggtagggatattacata-ttatatataggggtcggggttcgaacc 30004556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 30388563 - 30388506
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| |||| | ||||||||||||||||||||    
T  30388563 tcagttggtagggatattgcatatt-atatgcaggggccggggttcgaaccccagacac 30388506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 35950142 - 35950199
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  35950142 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 35950199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 36391960 - 36391903
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  36391960 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 36391903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 1563795 - 1563735
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  1563795 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 1563735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 9877323 - 9877263
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  9877323 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 9877263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 16200577 - 16200633
Alignment:
Q  233 ttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||| ||||| |||||| ||||| |||| |||||||||||||||||||||||||    
T  16200577 ttggtaggaatattgcatatt-atatgcaggggtcggggttcgaaccccagacacccc 16200633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 21066900 - 21066956
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagaca 285  Q
    |||||||||||||||||| |||| ||||||||| ||| ||||||||||||||| ||||    
T  21066900 tcagttggtagggatattgcata-ttatatgtaggggccggggttcgaaccccggaca 21066956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 23102614 - 23102554
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  23102614 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 23102554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 29053399 - 29053456
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccctt 96  Q
    |||| ||||||| ||||||||||||||| | | | |||||||||||||||| ||||||    
T  29053399 tgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtattttccctt 29053456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 41084053 - 41084105
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaacccca 281  Q
    |||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  41084053 tcagttggtagggatattgcata-ttatatgcaggggtcggggttcgaacccca 41084105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 43500064 - 43500011
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    |||||||||||||||||||| | || ||||||||||||| ||| ||||| ||||    
T  43500064 ttgtgaaagaaaaagaagaatgtcatatgtgacattgtgattgaccaatatcac 43500011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 12772129 - 12772180
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaacccc 280  Q
    |||||||||||||||||| |||| ||||||| ||| |||||||||||||||||    
T  12772129 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaacccc 12772180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 29407544 - 29407496
Alignment:
Q  41 tgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtatt 89  Q
    ||||||||| |||||||||| ||||| || ||||| |||||||||||||    
T  29407544 tgacattgtagttggccaatatcaccgacgacaatatcacccaagtatt 29407496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 42548094 - 42548035
Alignment:
Q  219 tgaacttcagtcagttggtagggatattacatatttatatgtagggtc-ggggttcgaacc 278  Q
    ||||||| | |||||||||||| ||||||||| ||||||||||||| | ||||||||||||    
T  42548094 tgaacttaactcagttggtaggaatattacat-tttatatgtaggggctggggttcgaacc 42548035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 11512469 - 11512393
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11512469 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 11512393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 31342089 - 31342015
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaa 84  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31342089 tcttgtgaaagaaaaagaagaaagctacatgtgacattgtggttggccaatgtcaccaaccacaatgtcatccaa 31342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 22893975 - 22894051
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22893975 tcttgttaaagaaaaagaagaaagtcacttgtgacattgtggttggtcaatgtcaccaaccacaatgtcacccaagt 22894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 20286986 - 20286932
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtca 64  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20286986 tcttgtaaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtca 20286932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 48342840 - 48342785
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  48342840 tgtgacattgtggttgaccaatgtcgccaaccataatgtcacccaagtattatccc 48342785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 7938352 - 7938295
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  7938352 tcagttggtagggatattacat-tttatatgtaggggtcggggttcgaaccccagacac 7938295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 22893928 - 22893889
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccct 95  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22893928 ccaatgtcaccaaccacaatgtcacccaagtattatccct 22893889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 29081704 - 29081751
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  29081704 tgtgacattgtggttgaccaatgtcaccaaccacaatatcacccaagt 29081751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 13638301 - 13638244
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  13638301 tcagttggtagggatattacata-ttatatgtaggggctggggttcgaaccccagacac 13638244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 4200652 - 4200584
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||| | |||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||    
T  4200652 gtgaacttaactcagttggtagggatattgcatatt-atatgcaggggtcggggttcgaaccccagacac 4200584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 32385407 - 32385358
Alignment:
Q  43 acattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatc 92  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  32385407 acattgtggttgaccaatgtcaccaatcacaatgtcacccaaatattatc 32385358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 20496553 - 20496619
Alignment:
Q  11 cttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtc 78  Q
    ||||||||||| | ||||||||| ||| ||||||||||||||| | ||||||||||||||||| ||||    
T  20496553 cttgtgaaagagagagaagaaagtcacgtgtgacattgtggtt-gacaatgtcaccaaccacattgtc 20496619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 11512517 - 11512555
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11512517 ccaatgtcaccaaccataatgtcacccaagtattatccc 11512555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 31342116 - 31342165
Alignment:
Q  43 acattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  31342116 acattgtggttggt-aatgtcaccaaccacaatgtcacccaaatattatcc 31342165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 36738341 - 36738279
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaa 74  Q
    |||||||| | ||||||||||| ||| ||||| |||||||||| ||||| |||||||||||||    
T  36738341 ttgtgaaaaagaaagaagaaagacacttgtgatattgtggttgaccaatatcaccaaccacaa 36738279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 36738372 - 36738421
Alignment:
Q  45 attgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    ||||| |||| ||||||||||||||||||||||||||||| |||| ||||    
T  36738372 attgtagttgaccaatgtcaccaaccacaatgtcacccaaatattttccc 36738421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 48342296 - 48342214
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggc--------caatgtcaccaaccacaatgtcacccaagt 86  Q
    |||| ||||| || |||||||| |||||||| |||||||||||||        ||||||||||||||||||||||||||||||    
T  48342296 ttgtaaaagagaatgaagaaagacacatgtggcattgtggttggctaatgtcacaatgtcaccaaccacaatgtcacccaagt 48342214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 48739800 - 48739740
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| ||| |||||||| |||| | |||||||||||||||||||||||    
T  48739800 tcagttggtagggatattgcat-tttatatgcaggggctggggttcgaaccccagacacccc 48739740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 52309166 - 52309106
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| | ||||| ||| ||||||||||||||||||||||||||    
T  52309166 tcagttggtagggatattgcatact-atatgcaggagtcggggttcgaaccccagacacccc 52309106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 53163608 - 53163668
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||||| ||| ||||||||||||||| ||||||||    
T  53163608 tcagttggtagggatattgcata-ttatatgtaggggccggggttcgaaccccggacacccc 53163668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 54021390 - 54021331
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    |||||||||| ||||||| |||||| ||||| |||| ||| ||||||||||||||||||||    
T  54021390 tcagttggtatggatattgcatatt-atatgcagggccggagttcgaaccccagacacccc 54021331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 20287013 - 20287063
Alignment:
Q  43 acattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||| ||||    
T  20287013 acattgtggttggt-aatgtcaccaaccacaatgtcacccaaatattttccc 20287063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 29081668 - 29081625
Alignment:
Q  23 aaagaagaaagccacatgtgacattgtggttggccaatgtcacc 66  Q
    |||||||||||| || ||||||||||||||||| ||||||||||    
T  29081668 aaagaagaaagctacttgtgacattgtggttggtcaatgtcacc 29081625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 33689261 - 33689308
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||| ||||||||||||||| | | |||||||||||||||    
T  33689261 tgtgacattgtgattggccaatgtcacccaactcaatgtcacccaagt 33689308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 48546187 - 48546245
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacc 287  Q
    ||||||||||| |||||| |||||| |||||||||| |||||||||||||||| ||||||    
T  48546187 tcagttggtagtgatattgcatatt-atatgtagggatcggggttcgaaccccggacacc 48546245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 19999881 - 19999938
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  19999881 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 19999938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 20496535 - 20496489
Alignment:
Q  40 gtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||||||||| |||| |||||||||| |||||||||||||| ||||    
T  20496535 gtgacattgtgattggtcaatgtcaccgaccacaatgtcaccaaagt 20496489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 22501987 - 22501930
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  22501987 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 22501930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 28689728 - 28689671
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  28689728 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 28689671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 47098746 - 47098803
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| | ||| |||||||||||||||||||||    
T  47098746 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccagacac 47098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 49159509 - 49159539
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||||||||||||    
T  49159509 ccaatgtcaccaaccacaatgtcacccaagt 49159539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 51772905 - 51772962
Alignment:
Q  231 agttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacaccc 288  Q
    |||||||||||||||| |||||| ||||| |||| |||||||||||||| |||||||||    
T  51772905 agttggtagggatattgcatatt-atatgcaggggtcggggttcgaacctcagacaccc 51772962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 53347346 - 53347289
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  53347346 tcagttggtagggatattgcata-ttatatgcagggactggggttcgaaccccagacac 53347289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 16205777 - 16205736
Alignment:
Q  24 aagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    |||||||||||||| ||||||||||||||||  |||||||||    
T  16205777 aagaagaaagccacttgtgacattgtggttgatcaatgtcac 16205736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 17602732 - 17602672
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||||| ||| || |||||||||||| ||||||||    
T  17602732 tcagttggtagggatattgcata-ttatatgtaggggccgaggttcgaaccccggacacccc 17602672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 25790904 - 25790941
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  25790904 ccaatgtcaccaaccataatgtcacccaaatattatcc 25790941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 29825120 - 29825164
Alignment:
Q  231 agttggtagggatattacatatttatatgtagggtcggggttcgaa 276  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  29825120 agttggtagggatattacata-ttatatgtagggttgaggttcgaa 29825164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 30779623 - 30779563
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||||||||||||||||||  ||||||||    
T  30779623 tcagttggtagggatattgcata-ttatatgcaggggtcggggttcgaaccctggacacccc 30779563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 34102667 - 34102607
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  34102667 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 34102607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 34898823 - 34898763
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcgg-ggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||| |||| | | |||||||||||||||||||||    
T  34898823 tcagttggtagggatattgcatatt-atatgcaggggctgaggttcgaaccccagacacccc 34898763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 39719949 - 39720009
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  39719949 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 39720009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 41936463 - 41936403
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  41936463 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 41936403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 48342865 - 48342918
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    |||| ||||| || |||||||| ||||||||||||||| |||||| ||||||||    
T  48342865 ttgtaaaagagaatgaagaaagacacatgtgacattgtcgttggctaatgtcac 48342918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 53432793 - 53432733
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  53432793 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 53432733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 4237035 - 4236976
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||| ||| |||| || |||| |||| ||||||||||||||| ||||||||    
T  4237035 tcagttggtagggacattgcataatt-tatgcaggggcggggttcgaaccccggacacccc 4236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 5633181 - 5633213
Alignment:
Q  57 caatgtcaccaaccacaatgtcacccaagtatt 89  Q
    |||| ||||||||||||||||||||||||||||    
T  5633181 caatatcaccaaccacaatgtcacccaagtatt 5633213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 8762134 - 8762087
Alignment:
Q  231 agttggtagggatattacatatttatatgtagg-gtcggggttcgaacc 278  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  8762134 agttggtagggatattacata-ttatatgcaggtgtcggggttcgaacc 8762087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 11820018 - 11820069
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaacccc 280  Q
    |||||||||||||||||| |||  ||||||||||| |||||||||||||||||    
T  11820018 tcagttggtagggatattgcat-gttatatgtaggagtcggggttcgaacccc 11820069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 17547037 - 17546997
Alignment:
Q  28 agaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||| ||||||||| |||||||||||| |||||||    
T  17547037 agaaagccacttgtgacattatggttggccaatatcaccaa 17546997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 29098695 - 29098766
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||| | ||||||||||| ||||||  ||||| ||||| |||| |||||||||||||||| ||||||||    
T  29098695 gtgaacttaactcagttggtagagatattgtatatt-atatgcaggggtcggggttcgaaccccggacacccc 29098766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 34847557 - 34847616
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacaccc 288  Q
    |||||||||||||||||| |||| ||||||| | |||||||||||||||| || |||||||    
T  34847557 tcagttggtagggatattgcata-ttatatgcaggggtcggggttcgaactccggacaccc 34847616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 2543821 - 2543895
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2543821 ttgtgaaagaaaaaaaaaaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 2543895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 369498 - 369578
Alignment:
Q  13 tgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  369498 tgtgaaagagaaagaagaaagacacttgtgacattgtggttggtcaatgtcaccaaccacaatgtcactcaagtattatcc 369578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 11448137 - 11448063
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||||||||||||||| ||||| |||| | |||||||||||||||||| | |||||||||||||||||||||||    
T  11448137 ttgtgaaagaaaaagaaaaaagctacatataacattgtggttggccaatattaccaaccacaatgtcacccaagt 11448063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 16193834 - 16193888
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16193834 tgtgacattgtggttgaccaatgtcaccaaccacaatgtcacccaagtattatcc 16193888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 28581783 - 28581731
Alignment:
Q  41 tgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28581783 tgacattgtggttggccaatgtcaccaaccacaatgtcagccaagtattatcc 28581731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 2980786 - 2980842
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacc 81  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||    
T  2980786 agaagaaagccacttgtgacattatggttgaccaatttcaccaaccacaatgtcacc 2980842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 2543772 - 2543733
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccct 95  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2543772 ccaatgtcaccaaccacaatgtcacccaagtattatccct 2543733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 7072092 - 7072149
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  7072092 tcagttggtagggatattacata-ttatatgcaggagtcggggttcgaaccccggacac 7072149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 19892332 - 19892275
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||| |||||    
T  19892332 tcagttggtagggatattgcatatt-atatgtaggggtcggggttcgaaccccggacac 19892275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 33646851 - 33646909
Alignment:
Q  232 gttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||| | ||||||||    
T  33646851 gttggtagggatattgcatatttatatgcaggggtcggggttcgaacctcggacacccc 33646909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 178701 - 178660
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcacc 66  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  178701 agaagaaagccacatgtgacattgtggttgatcaatgtcacc 178660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 1969010 - 1969070
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||||||||| ||||||| | ||| ||||||||||||||| ||||||||    
T  1969010 tcagttggtagggatattacata-ttatatgcaggggccggggttcgaaccccggacacccc 1969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 3294778 - 3294838
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||| |||| |||||||||||||||| ||||||||    
T  3294778 tcagttggtagggatattgcatatt-atatgcaggggtcggggttcgaaccccggacacccc 3294838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 11448187 - 11448224
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11448187 ccaatatcaccaaccacaatgtcacccaagtattatcc 11448224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 22997350 - 22997409
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacaccc 288  Q
    ||||||||||||||||||  ||||| |||||||||| |||||||||||||||| |||||||    
T  22997350 tcagttggtagggatattgaatatt-atatgtaggggtcggggttcgaaccccggacaccc 22997409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 23791051 - 23790992
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacaccc 288  Q
    ||||||||||||||||||  ||||| |||||||||| |||||||||||||||| |||||||    
T  23791051 tcagttggtagggatattgaatatt-atatgtaggggtcggggttcgaaccccggacaccc 23790992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 10521902 - 10521855
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||| ||||||||||||||||| | | |||||||||||||    
T  10521902 tgtgacattgtgattggccaatgtcaccaaactctatgtcacccaagt 10521855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 264
Target Start/End: Complemental strand, 31803652 - 31803617
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg 264  Q
    |||||||||||||||||| |||||||||||||||||    
T  31803652 tcagttggtagggatattgcatatttatatgtaggg 31803617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 6210068 - 6210125
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  6210068 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 6210125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 10483592 - 10483535
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| ||| |||||||| |||| |||||||||||||||| |||||    
T  10483592 tcagttggtagggatattgcat-tttatatgcaggggtcggggttcgaaccccggacac 10483535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 31935113 - 31935170
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| ||| |||||||| |||| |||||||||||||||| |||||    
T  31935113 tcagttggtagggatattgcat-tttatatgcaggggtcggggttcgaaccccggacac 31935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 34432853 - 34432796
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtag-ggtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| || ||| ||||||||||||||||||||    
T  34432853 tcagttggtagggatattgcata-ttatatgcagaggttggggttcgaaccccagacac 34432796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 35049816 - 35049750
Alignment:
Q  15 tgaaagaaaaagaagaaa-gccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcac 80  Q
    |||||||||||||||||| ||||| ||| | ||||||||||| |||  ||||||||| |||||||||    
T  35049816 tgaaagaaaaagaagaaaagccacttgtaatattgtggttggtcaacatcaccaaccgcaatgtcac 35049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 3196633 - 3196686
Alignment:
Q  229 tcagttggtagggatattacatatt-tatatgtagg-gtcggggttcgaacccc 280  Q
    ||||||||||||||||||||||||| |||||| ||| || ||||||||||||||    
T  3196633 tcagttggtagggatattacatattatatatgcaggagttggggttcgaacccc 3196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 7177309 - 7177369
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||||  || |||||||| |||| | |||||||||||||||||||||||    
T  7177309 tcagttggtagggatattgtat-tttatatgcaggggctggggttcgaaccccagacacccc 7177369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 16193810 - 16193757
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||| || ||||||||||| ||| |||||||||||| ||||||||| ||||    
T  16193810 ttgtgaaggagaaagaagaaagacacttgtgacattgtgattggccaatatcac 16193757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 26669743 - 26669683
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||||||||| ||  |||| |||||||||||| | |||||||||||||||||||||||    
T  26669743 tcagttggtagggacatg-cataattatatgtaggggctggggttcgaaccccagacacccc 26669683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 30704974 - 30705034
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| ||| || |||||||||| | |||||||||||||| ||||||||    
T  30704974 tcagttggtagggatattgcatgtt-atatgtaggggccggggttcgaaccccggacacccc 30705034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 1879243 - 1879187
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcacc 66  Q
    |||||||||| | | ||||||||| ||| | |||||||||||||| |||||||||||    
T  1879243 tcttgtgaaaaatagagaagaaagtcacttatgacattgtggttgaccaatgtcacc 1879187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 5150655 - 5150619
Alignment:
Q  57 caatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||| |||||||||||| |||||||||||    
T  5150655 caatgtcaccaagcacaatgtcaccaaagtattatcc 5150619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 8857104 - 8857155
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaacccc 280  Q
    ||||||||||||||||||||||| ||||||| | ||| |||||||||||||||    
T  8857104 tcagttggtagggatattacata-ttatatgcaggggccggggttcgaacccc 8857155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 11049723 - 11049687
Alignment:
Q  253 ttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||| |||||||||||||||| |||||||    
T  11049723 ttatatgtagggacggggttcgaaccccaaacacccc 11049687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 7755418 - 7755342
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7755418 tcttgttaaagaaaaagaaaaaagccacttgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 7755342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 39819145 - 39819087
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39819145 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 39819087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 15562275 - 15562212
Alignment:
Q  21 aaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaa 84  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15562275 aaaaagaagaaagtcacatgtgacattgtggttggccaatgtcatcaaccacaatgtcacccaa 15562212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 12918615 - 12918557
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12918615 tcttatgaaagaaaaagaaaaaagccacatgtgacattgtggttggccaatgtcaccaa 12918557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 13421772 - 13421841
Alignment:
Q  17 aaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||||||| ||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||    
T  13421772 aaagaaaaaaaagaaagtcacatgtaacgttgtggttggtcaatgtcaccaaccacaatgtcacccaagt 13421841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 34563326 - 34563406
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatc 92  Q
    ||||||||||||| ||||||||  || ||||||||||  ||||| |||||||||||||||| |||||||| ||||||||||    
T  34563326 ttgtgaaagaaaatgaagaaagatacttgtgacattgaagttggtcaatgtcaccaaccacgatgtcaccaaagtattatc 34563406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 30392888 - 30392831
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  30392888 tcagttggtagggatattgcatatt-atatgtaggagtcggggttcgaaccccagacac 30392831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 12918663 - 12918700
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12918663 ccaatgtcaccaaccacaatgtcacccaagtattatcc 12918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 39819193 - 39819230
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39819193 ccaatgtcaccaaccacaatgtcacccaagtattatcc 39819230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 40363127 - 40363070
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||| |||||    
T  40363127 tcagttggtagggatattgcatatt-atatgtaggggtcggggttcgaacccccgacac 40363070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 5398163 - 5398103
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||||||| |||||||| || | | |||||||||||||||||||||||    
T  5398163 tcagttggtagggatattacat-tttatatgcagaggctggggttcgaaccccagacacccc 5398103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 2806557 - 2806498
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||||  ||||| ||||||||||   ||||||||||||||||||||||    
T  2806557 tcagttggtagggatattgtatatt-atatgtaggggtcgggttcgaaccccagacacccc 2806498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 5095798 - 5095746
Alignment:
Q  44 cattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccctt 96  Q
    ||||||||||| | |||||||||||||||||| ||||||||||  ||||||||    
T  5095798 cattgtggttgtctaatgtcaccaaccacaatatcacccaagtgctatccctt 5095746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 7755459 - 7755495
Alignment:
Q  58 aatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    ||||||||||||||||||||||||||| |||||||||    
T  7755459 aatgtcaccaaccacaatgtcacccaaatattatccc 7755495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 15011365 - 15011421
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccct 95  Q
    |||||||||||| ||||||||||||||  | | | ||||||||||||||||||||||    
T  15011365 tgtgacattgtgattggccaatgtcactcaactctatgtcacccaagtattatccct 15011421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 18182591 - 18182631
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  18182591 agaagaaagccacttgtgacattgtggtttgccaatgtcac 18182631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 30610238 - 30610290
Alignment:
Q  16 gaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||| | |||| |||| ||||||||||||| ||||||||||||||||||||    
T  30610238 gaaagagacagaaaaaagtcacatgtgacattatggttggccaatgtcaccaa 30610290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 38387676 - 38387734
Alignment:
Q  228 gtcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    ||||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  38387676 gtcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 38387734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 1500975 - 1501032
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  1500975 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 1501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 3438962 - 3439019
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  3438962 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 3439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 8250357 - 8250300
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| |||| | ||||||||||||||||||||    
T  8250357 tcagttggtagggatattgcatatt-atatgcaggggccggggttcgaaccccagacac 8250300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 12918536 - 12918498
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcaccc-aagtattatcc 93  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  12918536 ccaatgtcaccaaccacaatgtcacccaaagtattatcc 12918498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 19612729 - 19612786
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||||||| |  ||||||||||||||||||||    
T  19612729 tcagttggtagggatattgcata-ttatatgtaggagctggggttcgaaccccagacac 19612786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 22653700 - 22653643
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  22653700 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 22653643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 29449462 - 29449519
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    ||||||||||||||||| |||| |||||||| |||| | ||||||||||||||||||||    
T  29449462 tcagttggtagggatatcacat-tttatatgcaggggccggggttcgaaccccagacac 29449519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 68
Target Start/End: Original strand, 5095818 - 5095847
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaa 68  Q
    ||||||||||||||||||||||||||||||    
T  5095818 tgtgacattgtggttggccaatgtcaccaa 5095847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 5913551 - 5913522
Alignment:
Q  57 caatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||||||||||||||||||||||||||||    
T  5913551 caatgtcaccaaccacaatgtcacccaagt 5913522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 11050813 - 11050753
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||||||||| ||||||| |||| | ||||||||||| || ||||||||    
T  11050813 tcagttggtagggatattacata-ttatatgcaggggctggggttcgaactccggacacccc 11050753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 27913521 - 27913469
Alignment:
Q  233 ttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacac 286  Q
    |||||||||||||| |||||| ||||| ||||| ||||||||||||| ||||||    
T  27913521 ttggtagggatattgcatatt-atatgcagggttggggttcgaaccctagacac 27913469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 29772333 - 29772277
Alignment:
Q  230 cagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    ||||||||||||||||| |||||| |||||| ||| | ||||||||||||||||||||    
T  29772333 cagttggtagggatattgcatatt-atatgtcggggctggggttcgaaccccagacac 29772277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 33228989 - 33228929
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  33228989 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 33228929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 44187714 - 44187775
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||| ||||||| | |||  ||||||| |||| |||||||||||||||||||||||||    
T  44187714 tcagttggcagggataatgcattattatatgcaggggtcggggttcgaaccccagacacccc 44187775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 4183190 - 4183241
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaacccc 280  Q
    |||||||||||||||||| |||| ||||||| ||| |||||||||||||||||    
T  4183190 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaacccc 4183241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 6217309 - 6217365
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccct 95  Q
    |||| ||||||| ||||||||||||||| | | | |||||||||||||||| |||||    
T  6217309 tgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtattttccct 6217365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 8742880 - 8742829
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaacccc 280  Q
    ||||||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  8742880 tcagttggtagagatattacata-ttatatgtaggggctggggttcgaacccc 8742829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 30390425 - 30390366
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacaccc 288  Q
    |||||||||||||||||| |||| ||||||| ||| | ||||||||||||||| |||||||    
T  30390425 tcagttggtagggatattgcata-ttatatgcaggagccggggttcgaaccccggacaccc 30390366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 33563276 - 33563209
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacac 286  Q
    |||||||| | ||||||||||||||||||  || |||||||| ||||   |||||||||||||||||||    
T  33563276 gtgaacttaactcagttggtagggatattgtat-tttatatgcaggggtcgggttcgaaccccagacac 33563209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 9177923 - 9177997
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  9177923 ttgtgaaagaaaaagaagaaagtcacatgtgatattgtggttggccaatatcaccaaccacaatgtcatccaagt 9177997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 23219360 - 23219432
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaa 84  Q
    |||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||||||||||||||    
T  23219360 ttgtgaaagaaaaagaagaaagtcatatatgacattgtggttggccaaggtcaccaaccacaatgtcacccaa 23219432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 1840053 - 1839999
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtca 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1840053 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtca 1839999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 5215645 - 5215722
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaa-gccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  5215645 tcttgtgaaagaaaaataagaaaagccacatgtgatattgtggttgaccaatgtcatcaaccacaatgtcacccaagt 5215722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 29385367 - 29385419
Alignment:
Q  16 gaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29385367 gaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 29385419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 12605660 - 12605715
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  12605660 tgtgacattgtggttgaccaatgtcaccaaccacaatgtcacttaagtattatccc 12605715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 896350 - 896268
Alignment:
Q  11 cttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||| ||||| |||||||||| || | ||||||||||||||||  |||| |||||||||||||| |||||||||| ||||||    
T  896350 cttgtaaaagagaaagaagaaaaccgcctgtgacattgtggttgatcaatatcaccaaccacaatctcacccaagtgttatcc 896268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 42772054 - 42772108
Alignment:
Q  23 aaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgt 77  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  42772054 aaagaagaaagacacttgtgacattgtggttggtcaatgtcaccaaccacaatgt 42772108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 19417527 - 19417469
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||||||||  ||||||| ||||||||||||||| |||| |||||||||||||    
T  19417527 tcttgtgaaagaaaagaaagaaagtcacatgtgacattgtagttgaccaatgtcaccaa 19417469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 25879406 - 25879455
Alignment:
Q  35 cacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaa 84  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  25879406 cacatgtgacattgtggttggctaatatcaccaaccacaatgtcatccaa 25879455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 7137721 - 7137665
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||| || |||||||| ||| ||||||||||||||||| ||||||||||||    
T  7137721 ttgtgaaagagaatgaagaaagtcacttgtgacattgtggttggtcaatgtcaccaa 7137665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 36568785 - 36568733
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgaca-ttgtggttggccaatgtc 63  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  36568785 ttgtgaaagaaaaggaagaaagccacatgtgacatttgtggttgaccaatgtc 36568733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 41287997 - 41288041
Alignment:
Q  49 tggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||    
T  41287997 tggttggccaatatcaccaaccacaatgtcacccaaatattatcc 41288041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 5215597 - 5215560
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  5215597 ccaatgttaccaaccacaatgtcacccaagtattatcc 5215560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 8241064 - 8241124
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||| | ||||||||||||||||||| ||||||||    
T  8241064 tcagttggtagggatattgcatatt-atatgcaagggtcggggttcgaaccccggacacccc 8241124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 12891571 - 12891631
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||||| ||| ||||||||||||||| ||||||||    
T  12891571 tcagttggtagggatattgcata-ttatatgtaggggccggggttcgaaccccggacacccc 12891631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 31074183 - 31074132
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaacccc 280  Q
    |||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  31074183 tcagttggtagggatattacat-tttatatgtaggagccggggttcgaacccc 31074132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 41930108 - 41930179
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||| | ||||||| |||||||||| ||| |||||||| |||| | |||||||||||||||||||||||    
T  41930108 gtgaacttaactcagttgatagggatattgcat-tttatatgcaggggctggggttcgaaccccagacacccc 41930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 6414082 - 6414128
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaa 276  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  6414082 tcagttggtagggatattgcata-ttatatgcagggtcggggttcgaa 6414128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 31848239 - 31848177
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccaca 73  Q
    |||||||||||| | |||||||| |||| |||||| |||||||||| |||| ||||||||||||    
T  31848239 tcttgtgaaagagagagaagaaa-ccacttgtgaccttgtggttggtcaatatcaccaaccaca 31848177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 9125677 - 9125734
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacacc 287  Q
    ||||||||||| |||||| |||||| ||||| |||| ||||||||||||||| ||||||    
T  9125677 tcagttggtagcgatattgcatatt-atatgcagggccggggttcgaaccccggacacc 9125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 11897262 - 11897319
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  11897262 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 11897319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 25729496 - 25729439
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||||||||||||  ||| |||||||| |||| ||||||||||||||||||||||    
T  25729496 tcagttggtagggatatcgcat-tttatatgcaggggtcggggttcgaaccccagacac 25729439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 29385416 - 29385446
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||||||||||||    
T  29385416 ccaatgtcaccaaccacaatgtcacccaagt 29385446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 36888451 - 36888394
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  36888451 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 36888394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 16210982 - 16210934
Alignment:
Q  233 ttggtagggatattacatatttatatgtagggtcggggttcgaaccccag 282  Q
    |||||||||| |||||||| | |||||||||||| |||||||||||||||    
T  16210982 ttggtagggacattacataat-atatgtagggtcagggttcgaaccccag 16210934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 27696292 - 27696263
Alignment:
Q  67 aaccacaatgtcacccaagtattatccctt 96  Q
    ||||||||||||||||||||||||||||||    
T  27696292 aaccacaatgtcacccaagtattatccctt 27696263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 2328608 - 2328663
Alignment:
Q  231 agttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||| |||||| ||||| ||| | |||||||||||||||||||||    
T  2328608 agttggtagggatattgcatatt-atatgcaggagccggggttcgaaccccagacac 2328663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 277
Target Start/End: Original strand, 4153550 - 4153609
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgta-gggtcggggttcgaac 277  Q
    |||||||| | |||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  4153550 gtgaacttaactcagttggtagggatattgcat-tttatatgtatgggttggggttcgaac 4153609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 5900306 - 5900361
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagaca 285  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||| ||||    
T  5900306 tcagttggtagggatattgcata-ttatatgcaggggccgggttcgaaccccggaca 5900361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 12605634 - 12605582
Alignment:
Q  13 tgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||||  ||||||||||| ||||||||||||| ||||||  |||||||||    
T  12605634 tgtgaaagtgaaagaagaaagacacatgtgacattatggttgatcaatgtcac 12605582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 22097488 - 22097528
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtca 79  Q
    ||||||||||| |||| |||||||||||||| |||||||||    
T  22097488 tgtgacattgtagttgaccaatgtcaccaactacaatgtca 22097528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 26912851 - 26912906
Alignment:
Q  233 ttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacaccc 288  Q
    |||||||||||||| |||||| |||||||||| | ||||||||||||||| ||||||    
T  26912851 ttggtagggatattgcatatt-atatgtaggggccggggttcgaaccccaaacaccc 26912906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 288
Target Start/End: Complemental strand, 32252980 - 32252944
Alignment:
Q  253 ttatatgtaggg-tcggggttcgaaccccagacaccc 288  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32252980 ttatatgtaggggtcggggttcgaaccccagacaccc 32252944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 31846867 - 31846925
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31846867 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatatcaccaa 31846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 6607471 - 6607527
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcacc 66  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  6607471 tcttgtgaaagaaaaagaagaaagccacatgtgacattatggttggtcaatgtcacc 6607527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 53261147 - 53261093
Alignment:
Q  35 cacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtatt 89  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  53261147 cacatgtgacattgtggttggtcaatgtcaccaaccacaatgtcacctaagtatt 53261093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 54223629 - 54223561
Alignment:
Q  16 gaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaa 84  Q
    |||||| ||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  54223629 gaaagagaaagaagaaagacatttgtgacattgtggttggtcaatgtcaccaaccacaatgtcatccaa 54223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 31012207 - 31012152
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcacca 67  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  31012207 ttgtgaaagaaaaagaaaaaagtcacatgtgacattgtggttggtcaatgtcacca 31012152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 38324924 - 38324977
Alignment:
Q  26 gaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtca 79  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  38324924 gaagaaagccacatgtgatattatggttggccaatatcaccaaccacaatgtca 38324977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 30023650 - 30023694
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcaccca 83  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  30023650 tgtgacattgtggttggtcaatgtcaccaaccacaatgtcaccca 30023694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 6608426 - 6608375
Alignment:
Q  15 tgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcacc 66  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  6608426 tgaaagaaaaagaaggaagccacgtgtgacattatggttggccaatgtcacc 6608375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 11392379 - 11392307
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||| | |||||||||||   |||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  11392379 ttgtgaaagagagagaagaaagcct--tgtgacattgtggtaggccaatttcatcaaccacaatgtcacccaagt 11392307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 40051636 - 40051696
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||||    
T  40051636 tcagttggtagggatattgcatatt-atatgtaggggtaggggttcgaaccccagacacccc 40051696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 43063599 - 43063542
Alignment:
Q  11 cttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||||||  || ||||||||| |||||||||||||||||| |||||||||||    
T  43063599 cttgtgaaagaaagtgatgaaagccacttgtgacattgtggttggctaatgtcaccaa 43063542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 13161761 - 13161818
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    ||||||||| |||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  13161761 tcagttggttgggatattacatattt-tatgcaggggtcggggttcgaaccccagacac 13161818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 36273062 - 36273116
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||| ||||||||||| |||| ||||| ||||||||||||||||||| ||||||    
T  36273062 tgtgatattgtggttggtcaatatcaccgaccacaatgtcacccaagtgttatcc 36273116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 44195691 - 44195634
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgtagggtcggggttcgaa 276  Q
    |||||||| | |||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  44195691 gtgaacttaattcagttggtagggatattgcat-tttatatgcagggtcggggttcgaa 44195634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 9712943 - 9712984
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcacc 66  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  9712943 agaagaaagccacttgtgacattgtggttggtcaatgtcacc 9712984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 13578521 - 13578461
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||| |||| |||||||||||||||| ||||||||    
T  13578521 tcagttggtagggatattgcatatt-atatgcaggggtcggggttcgaaccccggacacccc 13578461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 23778877 - 23778821
Alignment:
Q  233 ttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||||||| ||||| |||| | |||||||||||||||||||||||    
T  23778877 ttggtagggatattacatatt-atatgcaggggttggggttcgaaccccagacacccc 23778821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 42381169 - 42381109
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||||| ||||||||||    
T  42381169 tcagttggtagggatattgcatgtt-atatgtaggggtcggggttcgaacctcagacacccc 42381109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 54215775 - 54215835
Alignment:
Q  229 tcagttggtagggatat-tacatatttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||  ||||| |||||||||||||  |||||||||||||||||||||||    
T  54215775 tcagttggtagggataaatacat-tttatatgtaggggtggggttcgaaccccagacacccc 54215835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 6607444 - 6607393
Alignment:
Q  43 acattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatccct 95  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||| |||||    
T  6607444 acattgtggttggt-aatgtcaccaaccacaatgtcacctaagtattgtccct 6607393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 17815481 - 17815422
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacaccc 288  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||| ||| |||||||    
T  17815481 tcagttggtagggatattacata-ttatatgcaggggtcggggttcgaatccctgacaccc 17815422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 22435419 - 22435379
Alignment:
Q  25 agaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  22435419 agaagaaagccacttgtgacattgtggtttgccaatgtcac 22435379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 3764064 - 3764010
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccaga 283  Q
    ||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||    
T  3764064 tcagttggtagggatattacata-ttatatgcaggggctggggttcgaaccccaga 3764010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 31012259 - 31012294
Alignment:
Q  58 aatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||||||||||||| |||||||||||    
T  31012259 aatgtcaccaaccacaatgtcacctaagtattatcc 31012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 31846817 - 31846782
Alignment:
Q  58 aatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||| |||||||||||||||||||||    
T  31846817 aatgtcaccaaccataatgtcacccaagtattatcc 31846782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 41306689 - 41306752
Alignment:
Q  15 tgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaaccacaatgtc 78  Q
    ||||||||| ||||||||  ||  ||||||||| ||||||| |||| |||||||||||||||||    
T  41306689 tgaaagaaagagaagaaatacatttgtgacattatggttggtcaatatcaccaaccacaatgtc 41306752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 52798292 - 52798342
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaacccc 280  Q
    |||||||||||||||||| |||| ||||||| || |||||||||||||||||    
T  52798292 tcagttggtagggatattgcata-ttatatgcagagtcggggttcgaacccc 52798342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 56479293 - 56479223
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    |||||||| | |||||||||||||||||| |||| ||||||| ||||   ||||||||||||| ||||||||    
T  56479293 gtgaacttaactcagttggtagggatattgcata-ttatatgcaggggtcgggttcgaaccccggacacccc 56479223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 4958612 - 4958555
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  4958612 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 4958555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 10417277 - 10417220
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||| |||||    
T  10417277 tcagttggtagggatattacata-ttatatgcaggagtcagggttcgaaccccggacac 10417220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 30023535 - 30023489
Alignment:
Q  40 gtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||| |||||| |||||||||||||||||||| ||||| ||||    
T  30023535 gtgacattatggttgaccaatgtcaccaaccacaatatcacctaagt 30023489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 31846922 - 31846952
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||||||||||||    
T  31846922 ccaatgtcaccaaccacaatgtcacccaagt 31846952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 33380652 - 33380606
Alignment:
Q  43 acattgtggttggccaatgtcaccaaccacaatgtcacccaagtatt 89  Q
    |||||||||||| ||||| |||||||||||||||||| | |||||||    
T  33380652 acattgtggttgaccaatatcaccaaccacaatgtcatctaagtatt 33380606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 47890709 - 47890766
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    ||||||||||| |||||| |||||| ||||| |||| ||||||||||||||||||||||    
T  47890709 tcagttggtagagatattgcatatt-atatgcaggggtcggggttcgaaccccagacac 47890766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 48569232 - 48569175
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  48569232 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 48569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 1439632 - 1439692
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||| ||| ||| |||||| ||||| | ||||||||||||||||||||||||||||    
T  1439632 tcagttggtatggacattgcatatt-atatgcaagggtcggggttcgaaccccagacacccc 1439692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 8965108 - 8965168
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  8965108 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 8965168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 21935491 - 21935551
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  21935491 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 21935551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 30057236 - 30057296
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | |||||||||||| |||||| ||||||||    
T  30057236 tcagttggtagggatattgcata-ttatatgcaggggtcggggttcaaaccccggacacccc 30057296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 32008369 - 32008402
Alignment:
Q  58 aatgtcaccaaccacaatgtcacccaagtattat 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  32008369 aatgtcaccaaccacaatgtcacccaagtgttat 32008402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 32339338 - 32339398
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    ||||||| |||||||||| |||||| ||||| | |||||||||||| |||||||||||||||    
T  32339338 tcagttgttagggatattgcatatt-atatgcaagggtcggggttcaaaccccagacacccc 32339398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 34353793 - 34353853
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtag-ggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| || |||| ||||||||||||| ||||||||    
T  34353793 tcagttggtagggatattgcata-ttatatgcagaggtcagggttcgaaccccggacacccc 34353853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 42073177 - 42073229
Alignment:
Q  233 ttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacac 286  Q
    ||||||| |||||| ||| ||||||||||||||| ||||||||||||| |||||    
T  42073177 ttggtagagatattgcat-tttatatgtagggtccgggttcgaaccccggacac 42073229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 43905724 - 43905784
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| ||| || ||||| |||| |||||||||||||||| ||||||||    
T  43905724 tcagttggtagggatattgcatgtt-atatgcagggatcggggttcgaaccccggacacccc 43905784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 49901496 - 49901556
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  49901496 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 49901556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2254608 - 2254564
Alignment:
Q  20 gaaaaagaagaaagccacatgtgacattgtggttggccaatgtca 64  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||    
T  2254608 gaaaaaaaaaaaagtcacatgtgacattgtggttggtcaatgtca 2254564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 25235851 - 25235796
Alignment:
Q  231 agttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||| |||||| ||||| |||| | ||||||||||||||||||||    
T  25235851 agttggtagggatattgcatatt-atatgcaggggctggggttcgaaccccagacac 25235796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 33530811 - 33530858
Alignment:
Q  233 ttggtagggatattacatatttatatgtaggg-tcggggttcgaacccc 280  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  33530811 ttggtagggatattgcata-ttatatgtagggatcggggttcgaacccc 33530858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 54613058 - 54613030
Alignment:
Q  58 aatgtcaccaaccacaatgtcacccaagt 86  Q
    |||||||||||||||||||||||||||||    
T  54613058 aatgtcaccaaccacaatgtcacccaagt 54613030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 43465168 - 43465112
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcacc 66  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  43465168 tcttgtgaaaaaaaaagaagaaagccacatgtgatattgtggttggccaatgtcacc 43465112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 45051339 - 45051384
Alignment:
Q  35 cacatgtgacattgtggttggccaatgtcaccaaccacaatgtcac 80  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  45051339 cacatgtgacattgtggtcggccaatgtcaccaaccacaatgtcac 45051384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 33763505 - 33763461
Alignment:
Q  45 attgtggttggccaatgtcaccaaccacaatgtcacccaagtatt 89  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
T  33763505 attgtggttgaccaatgtcaccaaccacaatgtcacccaattatt 33763461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 44673704 - 44673647
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  44673704 tcagttggtagggatatcacat-tttatatgcaggggtcggggttcgaaccccagacac 44673647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 1605045 - 1605082
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1605045 ccaatgtcaccaactacaatgtcacccaagtattatcc 1605082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 2294147 - 2294095
Alignment:
Q  237 tagggatattacatatttatatgtaggg-tcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  2294147 tagggatattacatatt-atatgcaggggtcggggttcgaaccccagacacccc 2294095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 24790380 - 24790320
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||||||  ||||||||    
T  24790380 tcagttggtagggatattacata-ttatatgtaggggttggggttcgaaccctggacacccc 24790320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 26192772 - 26192712
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtag-ggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||| ||||| || |||||||||||||||||| ||||||||    
T  26192772 tcagttggtagggatattgcatatt-atatgcagaggtcggggttcgaaccccggacacccc 26192712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 31470824 - 31470771
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    |||||||||||||||||||| |  || ||||||||||||||||| |||||||||    
T  31470824 ttgtgaaagaaaaagaagaatgatacttgtgacattgtggttggtcaatgtcac 31470771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 9187279 - 9187228
Alignment:
Q  229 tcagttggtagggatattacatatttatatg-tagggtcggggttcgaacccc 280  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  9187279 tcagttggtagggatattacat-tttatatgctggggtcggggttcgaacccc 9187228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 14582495 - 14582445
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaacccc 280  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||||||||||||    
T  14582495 tcagttgttagggatattgcatatt-atatggagggtcggggttcgaacccc 14582445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 1632496 - 1632439
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||| |||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  1632496 tcagttggtaggaatattacata-ttatatgcaggagtcggggttcgaaccccggacac 1632439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 4531848 - 4531902
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||||||| |||| |||||||| ||||||||| | |||| ||||||    
T  4531848 tgtgacattgtggttggtcaatatcaccaactacaatgtcatctaagttttatcc 4531902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 7765657 - 7765714
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||| |||||||||||| ||||||| ||| | |||||||||||||||||||||    
T  7765657 tcagttggtatggatattacata-ttatatgcaggagccggggttcgaaccccagacac 7765714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 7931605 - 7931655
Alignment:
Q  15 tgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||| ||||||||||| ||  ||||||||||||||| |||||||||||    
T  7931605 tgaaagagaaagaagaaagacatttgtgacattgtggtttgccaatgtcac 7931655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 12548061 - 12548118
Alignment:
Q  229 tcagttggtagggatattacatatttatatg-tagggtcggggttcgaaccccagacac 286  Q
    |||||||||||| |||||||||| ||||||| | |||||||||||||||||||| ||||    
T  12548061 tcagttggtaggaatattacata-ttatatgctggggtcggggttcgaaccccaaacac 12548118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 16449139 - 16449196
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| | |||| ||||||||||||||||||||    
T  16449139 tcagttggtagggatattgcata-ttatatgcaggggttggggttcgaaccccagacac 16449196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 16687549 - 16687511
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  16687549 ccaatatcaccaaccacaatgtcatccaagtattatccc 16687511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 26022261 - 26022318
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| | ||| |||||||||||||||||||||    
T  26022261 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccagacac 26022318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 33763539 - 33763589
Alignment:
Q  15 tgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    ||||||||||||||||||| ||| ||||| ||||| |||| ||||||||||    
T  33763539 tgaaagaaaaagaagaaaggcacttgtgatattgtagttgaccaatgtcac 33763589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 34472311 - 34472368
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| || ||||||||||||||||||||    
T  34472311 tcagttggtagggatattgcata-ttatatgcaggagttggggttcgaaccccagacac 34472368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 36540301 - 36540358
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtaggg-tcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| ||| |||||||| |||| ||||||||||||||||| ||||    
T  36540301 tcagttggtagggatattgcat-tttatatgcaggggtcggggttcgaaccccaaacac 36540358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 38219624 - 38219567
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  38219624 tcagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 38219567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 38955250 - 38955193
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacac 286  Q
    ||||||||||||||||||||||| ||||||| | ||| ||||||||||||||| |||||    
T  38955250 tcagttggtagggatattacata-ttatatgcaggggccggggttcgaaccccggacac 38955193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 42880962 - 42881019
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||||||| |||||    
T  42880962 tcagttggtagggatattgcata-ttatatgtaggagccggggttcgaaccccggacac 42881019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 43465219 - 43465257
Alignment:
Q  56 ccaatgtcaccaaccacaatgtcacccaagtattatccc 94  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  43465219 ccaatgtcaccaaccagaatgtcatccaagtattatccc 43465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 43656050 - 43656099
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaacc 278  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  43656050 tcagttggtagggatattgcata-ttatatgtaggggtcggggttcgaacc 43656099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 3190005 - 3189950
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| | |||||||||||||||||| |||||    
T  3190005 tcagttggtagggatattgcata-ttatatgca-ggtcggggttcgaaccccggacac 3189950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 7453366 - 7453426
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||| ||||||||||||| ||| ||||||||||||| | |||||||||||||| ||||||||    
T  7453366 tcagctggtagggatattgcat-tttatatgtaggggccggggttcgaaccccggacacccc 7453426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 8034468 - 8034408
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| |||||||||||| |||||||||||    
T  8034468 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaacaccagacacccc 8034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 8698636 - 8698576
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||||| |||| |||||||||| ||| ||||||||    
T  8698636 tcagttggtagggatattgcata-ttatatgtaggggttggggttcgaatcccggacacccc 8698576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 8953924 - 8953868
Alignment:
Q  230 cagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  8953924 cagttggtagggatattgcata-ttatatgcaggagtcggggttcgaaccccggacac 8953868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 10083177 - 10083237
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | |||||| |||||||||||| ||||||||    
T  10083177 tcagttggtagggatattgcata-ttatatgcaggggtcgaggttcgaaccccggacacccc 10083237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 22274667 - 22274607
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| ||| | ||||||||||||||| ||||||||    
T  22274667 tcagttggtagggatattgcata-ttatatgcaggagccggggttcgaaccccggacacccc 22274607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 27077153 - 27077093
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||||||||||||||| ||| ||||||||    
T  27077153 tcagttggtagggatattgcata-ttatatgcaggggtcggggttcgaatcccggacacccc 27077093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 68
Target Start/End: Original strand, 31470849 - 31470878
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaa 68  Q
    ||||||||||||||||||||||||||||||    
T  31470849 tgtgacattgtggttggccaatgtcaccaa 31470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 32719663 - 32719607
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| ||||| |||||||||| ||| |||||    
T  32719663 tcagttggtagggatattgcata-ttatatgcagggttggggttcgaatcccggacac 32719607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 34894383 - 34894443
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  34894383 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 34894443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 38745335 - 38745274
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||||||||||| | ||| | ||||||||||||  ||||||||    
T  38745335 tcagttggtagggatattgcatatttatatgcatgggccagggttcgaacccaggacacccc 38745274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 39362279 - 39362339
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtag-ggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| || ||| || ||||||||||||||||||||    
T  39362279 tcagttggtagggatattgcata-ttatatgcagaggttggagttcgaaccccagacacccc 39362339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 40249212 - 40249268
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacac 286  Q
    ||||| ||||||||||||||||| |||||||||||||| | ||| ||||||| |||||    
T  40249212 tcagtcggtagggatattacata-ttatatgtagggtctgagtttgaaccccggacac 40249268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 44444558 - 44444618
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| |||| | |||||||||||||| ||||||||    
T  44444558 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccggacacccc 44444618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 17467289 - 17467348
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaaccccagacacccc 289  Q
    ||||||||||||||||| ||||  ||||||| |||| | ||||||||||||| ||||||||    
T  17467289 tcagttggtagggatat-acattattatatgcaggggccgggttcgaaccccggacacccc 17467348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 25824926 - 25824898
Alignment:
Q  261 agggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||||||||||||||    
T  25824926 agggtcggggttcgaaccccagacacccc 25824898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1315 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 1866 - 1819
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  1866 tgtgatattgtggttgatcaatgtcaccaaccacaatgtcacccaagt 1819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1293 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 205 - 252
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagt 86  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  205 tgtgatattgtggttgatcaatgtcaccaaccacaatgtcacccaagt 252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 8835 - 8885
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtcggggttcgaacccc 280  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  8835 tcagttggtagggatattgcat-tttatatgcagggtcggggttcgaacccc 8885  T

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Target: scaffold0445 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 4070 - 4013
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagg-gtcggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  4070 tcagttggtagggatattgcatatt-atatgcaggagtcggggttcgaaccccagacac 4013  T

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Target: scaffold0343 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 12285 - 12338
Alignment:
Q  12 ttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcac 65  Q
    |||||||||| ||||||||| | ||| ||||||||||||||||| |||||||||    
T  12285 ttgtgaaagagaaagaagaaggacacttgtgacattgtggttggtcaatgtcac 12338  T

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Target: scaffold0343; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 12262 - 12226
Alignment:
Q  57 caatgtcaccaaccacaatgtcacccaagtattatcc 93  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12262 caatgtcaccaactacaatgtcacccaagtattatcc 12226  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 26553 - 26500
Alignment:
Q  39 tgtgacattgtggttggccaatgtcaccaaccacaatgtcacccaagtattatc 92  Q
    ||||| |||||| ||| |||||||||||||||||||||||||  ||||||||||    
T  26553 tgtgatattgtgtttgaccaatgtcaccaaccacaatgtcacataagtattatc 26500  T

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Target: scaffold0330 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 6771 - 6834
Alignment:
Q  218 gtgaacttcagtcagttggtagggatattacatatttatatgtagg-gtcggggttcgaacccca 281  Q
    |||||||| | |||||||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  6771 gtgaacttaactcagttggtagggatattgcata-ttatatgtaggagtcgaggttcgaacccca 6834  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 46540 - 46597
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacac 286  Q
    |||||||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||    
T  46540 tcagttggtagggatattgcata-ttatatgcaggggctggggttcgaaccccagacac 46597  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 507798 - 507740
Alignment:
Q  10 tcttgtgaaagaaaaagaagaaagccacatgtgacattgtggttggccaatgtcaccaa 68  Q
    |||||||||||| |||||||||| |||| ||| | |||||| |||| ||||||||||||    
T  507798 tcttgtgaaagagaaagaagaaatccacttgtaatattgtgattggtcaatgtcaccaa 507740  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 1050 - 1110
Alignment:
Q  229 tcagttggtagggatattacatatttatatgtagggtc-ggggttcgaaccccagacacccc 289  Q
    |||||||||||||| ||  |||| |||||||||||| | |||||||||||||||||||||||    
T  1050 tcagttggtagggacatg-cataattatatgtaggggctggggttcgaaccccagacacccc 1110  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 10882 - 10822
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacacccc 289  Q
    |||||||||||||||||| |||| ||||||| | ||| ||||||||||||||| ||||||||    
T  10882 tcagttggtagggatattgcata-ttatatgcaggggccggggttcgaaccccggacacccc 10822  T

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Target: scaffold0460 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 13259 - 13200
Alignment:
Q  229 tcagttggtagggatattacatatttatatgta-gggtcggggttcgaaccccagacaccc 288  Q
    |||||||||||||||||| |||| ||||||| | |||| |||||||||||||| |||||||    
T  13259 tcagttggtagggatattgcata-ttatatgcaggggttggggttcgaaccccggacaccc 13200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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