View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3238_low_50 (Length: 217)
Name: NF3238_low_50
Description: NF3238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3238_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 14956724 - 14956911
Alignment:
| Q |
14 |
cagagatgacgtttaatgctatgatgagaatgatatcgggaaaacggtattatggagatgacggagatgtgtcagatgttgaagaagctaaacaatttag |
113 |
Q |
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| T |
14956724 |
cagagatgacgtttaatgctatgatgagaatgatatcgggaaaacggtattatggagatgacggagatgtgtcagatgttgaagaagctaaacaatttag |
14956823 |
T |
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| Q |
114 |
ggagataataagtgagatgatgtctttgttaggtgctaataataagggtgattttttgcctttgttaaggttgtttgatcttgataat |
201 |
Q |
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| T |
14956824 |
ggagataataagtgagatgatgtctttgttaggtgctaataataagggtgattttttgcctttgttaaggttgtttgatcttgataat |
14956911 |
T |
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