View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3241_high_9 (Length: 252)
Name: NF3241_high_9
Description: NF3241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3241_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14003867 - 14003624
Alignment:
| Q |
1 |
tgcgttttgcatacaatgttaatagtggttgacgccaacttcagcattttctccacatctacgatcacttacagtcaaattgaacctacacaagttaaag |
100 |
Q |
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||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14003867 |
tgcgttttgcatacaatgttaatggtggctgacgccaacttcagcattttctccacatctacgatcacttacagtcaaattgaacctacacaagttaaag |
14003768 |
T |
|
| Q |
101 |
aaatgatttgtaacaatatgagattaaaattgaagcatatggaccctctgttctctttgacaattggccatgtccgaatgaaactacaaagttagttaaa |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
14003767 |
aaatgatttgtaacaatatgagaataaaattgaagcatatggaccctctgttctctttgacaattgaccatgtccgaatgaaactacaaagttagttaaa |
14003668 |
T |
|
| Q |
201 |
attaaattgttagatttgaaatgtcttggtgggttttctgtgct |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14003667 |
attaaattgttagatttgaaatgtcttggtgggttttctgtgct |
14003624 |
T |
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