View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3241_low_1 (Length: 606)

Name: NF3241_low_1
Description: NF3241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3241_low_1
NF3241_low_1
[»] chr3 (48 HSPs)
chr3 (1-502)||(35753773-35754274)
chr3 (405-495)||(35865752-35865842)
chr3 (435-495)||(35848111-35848171)
chr3 (1-48)||(12123421-12123468)
chr3 (3-49)||(9028187-9028233)
chr3 (1-46)||(40410711-40410756)
chr3 (1-57)||(4846938-4846994)
chr3 (3-55)||(12123080-12123132)
chr3 (2-46)||(35580292-35580336)
chr3 (2-42)||(41997822-41997862)
chr3 (1-47)||(7743107-7743154)
chr3 (1-51)||(31514204-31514254)
chr3 (4-46)||(33812723-33812765)
chr3 (1-43)||(34521599-34521641)
chr3 (1-47)||(41208399-41208445)
chr3 (1-42)||(8846418-8846459)
chr3 (1-42)||(28688332-28688373)
chr3 (422-487)||(35774317-35774382)
chr3 (1-42)||(45871700-45871741)
chr3 (1-42)||(54107672-54107713)
chr3 (1-49)||(34521262-34521310)
chr3 (2-46)||(34629981-34630025)
chr3 (2-42)||(44069126-44069166)
chr3 (3-42)||(27940275-27940314)
chr3 (1-40)||(35753408-35753447)
chr3 (4-42)||(8846079-8846117)
chr3 (1-47)||(14353044-14353090)
chr3 (1-47)||(26332665-26332710)
chr3 (1-47)||(40969596-40969642)
chr3 (1-47)||(41208742-41208788)
chr3 (1-47)||(43899416-43899462)
chr3 (1-42)||(7274656-7274697)
chr3 (1-42)||(7937646-7937687)
chr3 (1-34)||(14353389-14353422)
chr3 (2-51)||(19124515-19124563)
chr3 (1-42)||(26332322-26332363)
chr3 (1-42)||(31513866-31513907)
chr3 (1-34)||(44069465-44069498)
chr3 (1-42)||(45171409-45171450)
chr3 (1-42)||(52609704-52609745)
chr3 (4-44)||(2829408-2829448)
chr3 (3-47)||(15862519-15862563)
chr3 (3-47)||(41998158-41998202)
chr3 (2-42)||(43527026-43527066)
chr3 (2-34)||(45872032-45872064)
chr3 (12-48)||(50394377-50394413)
chr3 (2-42)||(51170724-51170764)
chr3 (1-45)||(54081284-54081328)
[»] scaffold1335 (1 HSPs)
scaffold1335 (435-495)||(92-152)
[»] chr8 (28 HSPs)
chr8 (3-51)||(39912263-39912311)
chr8 (3-48)||(6843492-6843537)
chr8 (2-49)||(37393473-37393520)
chr8 (1-47)||(24456994-24457040)
chr8 (4-54)||(30872774-30872824)
chr8 (4-42)||(31230958-31230996)
chr8 (1-46)||(758343-758388)
chr8 (1-42)||(24456737-24456778)
chr8 (1-54)||(35223765-35223818)
chr8 (1-42)||(37393819-37393860)
chr8 (1-42)||(40040165-40040206)
chr8 (1-45)||(26736125-26736169)
chr8 (3-42)||(31230616-31230655)
chr8 (3-42)||(39240033-39240072)
chr8 (2-45)||(39240362-39240405)
chr8 (4-42)||(119120-119158)
chr8 (1-35)||(5417155-5417189)
chr8 (8-46)||(8654285-8654323)
chr8 (4-42)||(16645893-16645931)
chr8 (1-47)||(23244857-23244903)
chr8 (2-48)||(35224110-35224156)
chr8 (4-42)||(44678320-44678358)
chr8 (1-34)||(1826133-1826166)
chr8 (1-34)||(1860578-1860611)
chr8 (2-47)||(29027311-29027356)
chr8 (2-34)||(3869292-3869324)
chr8 (2-42)||(11639378-11639418)
chr8 (4-40)||(14920416-14920452)
[»] chr4 (41 HSPs)
chr4 (1-49)||(32385153-32385201)
chr4 (2-46)||(24504283-24504327)
chr4 (2-46)||(46621270-46621314)
chr4 (3-42)||(11242808-11242847)
chr4 (3-42)||(48209951-48209990)
chr4 (1-42)||(18862783-18862824)
chr4 (1-42)||(21217850-21217891)
chr4 (1-42)||(33626206-33626247)
chr4 (1-42)||(44710406-44710447)
chr4 (1-42)||(54136094-54136135)
chr4 (1-45)||(25218084-25218128)
chr4 (1-41)||(33625868-33625908)
chr4 (1-41)||(33882291-33882331)
chr4 (1-45)||(45911579-45911623)
chr4 (1-44)||(1205379-1205422)
chr4 (3-42)||(9010849-9010888)
chr4 (3-42)||(46200487-46200526)
chr4 (4-47)||(46620925-46620968)
chr4 (4-42)||(10014468-10014506)
chr4 (4-42)||(10017818-10017856)
chr4 (4-42)||(10021609-10021647)
chr4 (1-47)||(25058831-25058877)
chr4 (1-43)||(29970195-29970237)
chr4 (1-47)||(38866396-38866442)
chr4 (1-47)||(52914950-52914996)
chr4 (1-42)||(1205719-1205760)
chr4 (3-48)||(9010502-9010547)
chr4 (1-42)||(21218189-21218230)
chr4 (1-34)||(29864517-29864550)
chr4 (1-34)||(32384664-32384697)
chr4 (1-34)||(34958843-34958876)
chr4 (1-46)||(34959173-34959218)
chr4 (1-46)||(37515795-37515840)
chr4 (1-42)||(44428516-44428557)
chr4 (1-42)||(45683120-45683161)
chr4 (1-34)||(46535534-46535567)
chr4 (1-45)||(1157203-1157247)
chr4 (1-45)||(1157548-1157592)
chr4 (1-45)||(2738880-2738924)
chr4 (2-42)||(29970516-29970555)
chr4 (1-45)||(38866742-38866786)
[»] chr7 (19 HSPs)
chr7 (2-48)||(10625103-10625149)
chr7 (4-47)||(8769280-8769323)
chr7 (1-47)||(35085737-35085783)
chr7 (1-42)||(31715963-31716004)
chr7 (4-57)||(43726587-43726640)
chr7 (3-42)||(10625428-10625467)
chr7 (4-47)||(32706730-32706773)
chr7 (2-45)||(39118010-39118053)
chr7 (3-42)||(47250890-47250929)
chr7 (1-47)||(23437150-23437196)
chr7 (2-48)||(37144106-37144152)
chr7 (1-42)||(8769624-8769665)
chr7 (1-42)||(18731022-18731063)
chr7 (2-47)||(23472591-23472636)
chr7 (1-42)||(23472898-23472939)
chr7 (1-42)||(35086082-35086123)
chr7 (1-46)||(43140697-43140742)
chr7 (1-42)||(44486274-44486315)
chr7 (1-34)||(48704150-48704183)
[»] chr1 (44 HSPs)
chr1 (2-48)||(25088358-25088404)
chr1 (1-46)||(29256831-29256876)
chr1 (1-42)||(50921433-50921474)
chr1 (1-49)||(16268031-16268079)
chr1 (1-45)||(30293354-30293398)
chr1 (3-47)||(37199265-37199309)
chr1 (1-47)||(9881550-9881596)
chr1 (3-49)||(19986466-19986512)
chr1 (1-47)||(23281352-23281398)
chr1 (1-47)||(25088014-25088060)
chr1 (1-47)||(30293011-30293057)
chr1 (1-47)||(33753223-33753269)
chr1 (1-46)||(2125544-2125589)
chr1 (3-48)||(34029065-34029110)
chr1 (1-42)||(51691877-51691918)
chr1 (1-42)||(52412601-52412642)
chr1 (3-47)||(14118528-14118572)
chr1 (3-47)||(34028719-34028763)
chr1 (3-47)||(45305753-45305797)
chr1 (1-45)||(50118347-50118391)
chr1 (2-46)||(50574860-50574904)
chr1 (1-44)||(10654371-10654414)
chr1 (3-42)||(24590569-24590608)
chr1 (4-47)||(28112719-28112762)
chr1 (3-42)||(34279585-34279624)
chr1 (3-42)||(50921063-50921102)
chr1 (3-42)||(52412942-52412981)
chr1 (11-49)||(30611216-30611254)
chr1 (1-42)||(10923365-10923406)
chr1 (2-47)||(13944509-13944554)
chr1 (1-42)||(16267718-16267759)
chr1 (1-42)||(18793694-18793735)
chr1 (1-46)||(19885981-19886026)
chr1 (1-42)||(28970422-28970463)
chr1 (1-42)||(31125939-31125980)
chr1 (10-55)||(32563949-32563994)
chr1 (1-42)||(35986235-35986276)
chr1 (1-34)||(51810480-51810513)
chr1 (6-42)||(11395007-11395043)
chr1 (2-42)||(14776078-14776118)
chr1 (2-42)||(22584695-22584735)
chr1 (1-45)||(24655586-24655630)
chr1 (3-47)||(36077269-36077313)
chr1 (2-42)||(51692213-51692253)
[»] chr6 (18 HSPs)
chr6 (1-46)||(24604874-24604919)
chr6 (1-56)||(3338466-3338521)
chr6 (2-40)||(24605216-24605254)
chr6 (4-46)||(33971927-33971969)
chr6 (4-45)||(13156179-13156220)
chr6 (4-45)||(13161035-13161076)
chr6 (1-40)||(1158593-1158632)
chr6 (1-35)||(1158931-1158965)
chr6 (4-46)||(33544821-33544863)
chr6 (1-42)||(3288933-3288974)
chr6 (1-34)||(9173912-9173945)
chr6 (1-46)||(25551678-25551723)
chr6 (1-46)||(31029523-31029568)
chr6 (1-42)||(35132604-35132645)
chr6 (2-42)||(11525108-11525148)
chr6 (2-42)||(13155842-13155882)
chr6 (2-42)||(13160698-13160738)
chr6 (3-47)||(33545166-33545210)
[»] chr2 (43 HSPs)
chr2 (3-48)||(32933588-32933633)
chr2 (2-45)||(4121106-4121149)
chr2 (2-49)||(16655949-16655996)
chr2 (1-48)||(27132508-27132555)
chr2 (3-42)||(37744452-37744491)
chr2 (1-48)||(43183925-43183972)
chr2 (1-47)||(44610860-44610906)
chr2 (1-42)||(4104162-4104203)
chr2 (1-42)||(12303788-12303829)
chr2 (1-42)||(16736104-16736145)
chr2 (1-42)||(18565345-18565386)
chr2 (1-42)||(31450669-31450710)
chr2 (1-42)||(43183586-43183627)
chr2 (4-48)||(17856534-17856578)
chr2 (1-41)||(28631278-28631318)
chr2 (1-49)||(39150167-39150215)
chr2 (2-42)||(40694198-40694238)
chr2 (3-46)||(34484234-34484277)
chr2 (3-42)||(41377698-41377737)
chr2 (1-35)||(12304127-12304161)
chr2 (1-35)||(16260881-16260915)
chr2 (1-47)||(34820621-34820667)
chr2 (1-34)||(4104501-4104534)
chr2 (1-42)||(4120767-4120808)
chr2 (1-42)||(5961672-5961713)
chr2 (1-34)||(16261212-16261245)
chr2 (1-34)||(20908853-20908886)
chr2 (1-42)||(28202863-28202904)
chr2 (1-42)||(28203202-28203243)
chr2 (1-46)||(28631616-28631661)
chr2 (1-42)||(32933933-32933974)
chr2 (1-46)||(34820278-34820323)
chr2 (1-42)||(37412596-37412637)
chr2 (1-46)||(37744730-37744775)
chr2 (3-48)||(39454448-39454493)
chr2 (1-34)||(39912638-39912671)
chr2 (12-48)||(5720139-5720175)
chr2 (1-49)||(12304496-12304544)
chr2 (1-49)||(18565062-18565110)
chr2 (2-42)||(20297413-20297453)
chr2 (6-42)||(27132857-27132893)
chr2 (2-42)||(27476710-27476750)
chr2 (2-42)||(31451009-31451049)
[»] chr5 (31 HSPs)
chr5 (1-49)||(7399073-7399121)
chr5 (1-45)||(15476266-15476310)
chr5 (1-52)||(35263487-35263538)
chr5 (1-42)||(8418526-8418567)
chr5 (1-46)||(19205285-19205330)
chr5 (3-48)||(19615419-19615464)
chr5 (1-42)||(29023940-29023981)
chr5 (2-47)||(40589397-40589442)
chr5 (2-47)||(40590000-40590045)
chr5 (1-49)||(12593452-12593500)
chr5 (2-46)||(15670494-15670538)
chr5 (3-47)||(19204942-19204986)
chr5 (2-46)||(31909273-31909317)
chr5 (4-47)||(12593801-12593844)
chr5 (2-49)||(33699271-33699318)
chr5 (1-48)||(36752243-36752290)
chr5 (1-51)||(5088470-5088520)
chr5 (1-34)||(5087818-5087851)
chr5 (1-34)||(10656105-10656138)
chr5 (1-42)||(10656436-10656477)
chr5 (2-47)||(15267240-15267284)
chr5 (2-47)||(21750808-21750853)
chr5 (1-34)||(26289031-26289064)
chr5 (4-41)||(39706396-39706433)
chr5 (1-34)||(42710692-42710725)
chr5 (1-45)||(5460288-5460332)
chr5 (2-42)||(9693261-9693301)
chr5 (3-47)||(18514286-18514330)
chr5 (1-33)||(31656370-31656402)
chr5 (6-42)||(40589057-40589093)
chr5 (6-42)||(40589660-40589696)
[»] scaffold0809 (2 HSPs)
scaffold0809 (1-47)||(4660-4706)
scaffold0809 (3-46)||(4337-4380)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-42)||(11829-11870)
[»] scaffold0045 (2 HSPs)
scaffold0045 (2-42)||(66082-66122)
scaffold0045 (2-42)||(73414-73454)
[»] scaffold0051 (1 HSPs)
scaffold0051 (4-42)||(40697-40735)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-42)||(11642-11683)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-45)||(13883-13927)


Alignment Details
Target: chr3 (Bit Score: 486; Significance: 0; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 1 - 502
Target Start/End: Original strand, 35753773 - 35754274
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattatataataaattttaagattaatgtatcatattttatttggttatcaaacg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35753773 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattatataataaattttaagattaatgtatcatattttatttggtcatcaaacg 35753872  T
Q  101 ttaaattgagacatagcatgatacagtttgtttttccttgagaaataagtacaatacaaataccaacaaaatattacacttccaaatcaatcaaatgagt 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35753873 ttaaattgagacatagcatgatacaatttgtttttccttgagaaataagtacaatacaaataccaacaaaatattacacttccaaatcaatcaaacgagt 35753972  T
Q  201 tgtgcaacaaagaacataatcaaagataaataaagcagcattagttacaattgcctatgtgattacatgaaccaaccattgtaacattatgagaaaatga 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35753973 tgtgcaacaaagaacataatcaaagataaataaagcagcattagttacaattgcctatgtgattacatgaaccaaccattgtaacattatgagaaaatga 35754072  T
Q  301 agacaccctctccatacactaatgcaagatagccaacatgagaatgattgcagctggaataagaaatacttaaacacagtaataaaacaagataaatttc 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35754073 agacaccctctccatacactaatgcaagatagccaacatgagaatgattgcagctgaaataagaaatacttaaacacagtaataaaacaagataaatttc 35754172  T
Q  401 atattagaccaataataataagactcaaaaagcattgtgacgaagaacctctgtaattaacttatggaaattagtgtatgatgatcctccaaaatcatta 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35754173 atattagaccaataataataagactcaaaaagcattgtgacgaagaacctctgtaattaacttatggaaattagtgtatgatgatcctccaaaatcatta 35754272  T
Q  501 gc 502  Q
    ||    
T  35754273 gc 35754274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 495
Target Start/End: Original strand, 35865752 - 35865842
Alignment:
Q  405 tagaccaataataataagactcaaaaagcattgtgacgaagaacctctgtaattaacttatggaaattagtgtatgatgatcctccaaaat 495  Q
    |||||| || ||||||  ||||||| |||||||||| |||||| |||| ||||||| |||| ||||||| |||||||||||||||| ||||    
T  35865752 tagaccgattataatataactcaaatagcattgtgatgaagaagctctttaattaaattatagaaattaatgtatgatgatcctcccaaat 35865842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 35848111 - 35848171
Alignment:
Q  435 ttgtgacgaagaacctctgtaattaacttatggaaattagtgtatgatgatcctccaaaat 495  Q
    |||||| ||||||||||| | |||||||||||||||||| |||||||||||||||| ||||    
T  35848111 ttgtgatgaagaacctctttgattaacttatggaaattattgtatgatgatcctcccaaat 35848171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12123421 - 12123468
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  12123421 gcgatactacctaaatagttaagggaccaaaaatgaaatttaacctat 12123468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 9028233 - 9028187
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  9028233 gatactacctaaatagttaagggaccaaaaatgtaatttagcctatt 9028187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40410756 - 40410711
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  40410756 gcgatactacctaaatagttaagggaccaaaaatgcaatttaacct 40410711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4846938 - 4846994
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattatataata 57  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||| || |||||    
T  4846938 gcgatactacctaaatagttaagggaccaaaaatgcaatttagcctataatctaata 4846994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 12123132 - 12123080
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctattatataa 55  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||| |||||    
T  12123132 gatactacctaaatagttaagggaccaaaaatgcaatttagcctattttataa 12123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 35580292 - 35580336
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  35580292 cgatactacctaaatagttaagggaccaaaaatgcaatttaacct 35580336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 41997862 - 41997822
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  41997862 cgatactacctaaatagttaagggaccaaaaatgtaattta 41997822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7743107 - 7743154
Alignment:
Q  1 gcgatactacctaaatagttaaggtacc-aaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  7743107 gcgatactacctaaatagttaagggaccaaaaaatgtaatttaaccta 7743154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31514204 - 31514254
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattat 51  Q
    |||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  31514204 gcgatactacctaaatagttaagggactaaaaatgcaatttagcctattat 31514254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 33812765 - 33812723
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  33812765 atactacctaaatagttaagggaccaaaaatgaaatttaacct 33812723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34521599 - 34521641
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaa 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  34521599 gcgatactacctaaatagttaagggaccaaaaatgcaatttaa 34521641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41208445 - 41208399
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||||    
T  41208445 gcgatactacttaaatagttaagggaccaaaaatgcaatttaaccta 41208399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8846418 - 8846459
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  8846418 gcgatactacctaaatagttaagggaccaaaaatgcaattta 8846459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28688332 - 28688373
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  28688332 gcgatactacctaaatagttaagggacaaaaaatgtaattta 28688373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 487
Target Start/End: Original strand, 35774317 - 35774382
Alignment:
Q  422 gactcaaaaagcattgtgacgaagaacctctgtaattaacttatggaaattagtgtatgatgatcc 487  Q
    |||||||| ||| || ||| ||||||||||| | |||||||| ||||||||| |||||||||||||    
T  35774317 gactcaaatagctttatgatgaagaacctctttgattaacttctggaaattattgtatgatgatcc 35774382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45871741 - 45871700
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  45871741 gcgatactacctaaatagttaagggaccaaaaatgcaattta 45871700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 54107713 - 54107672
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  54107713 gcgatactacctaaatagttaagggaccaaaaatgcaattta 54107672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34521310 - 34521262
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    ||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  34521310 gcgatactacctaaataattaagggaccaaaaatgcaatttagcctatt 34521262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 34630025 - 34629981
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||    
T  34630025 cgatactacttaaatagttaagggaccaaaaatataatttaacct 34629981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 44069166 - 44069126
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  44069166 cgatactacctaaatagttaagggaccaaaaatgcaattta 44069126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 27940314 - 27940275
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  27940314 gatactacctaaatagttaagggaccaaaaatgaaattta 27940275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 35753447 - 35753408
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatt 40  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  35753447 gcgatactacctaaatagttaagggaccaaaaatgcaatt 35753408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 8846117 - 8846079
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  8846117 atactacctaaatagttaagggaccaaaaatgcaattta 8846079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14353090 - 14353044
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||| |||||| | |||||||| |||||||||||    
T  14353090 gcgatactacctaaataattaagggatcaaaaatgcaatttaaccta 14353044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26332665 - 26332710
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  26332665 gcgatactacctaaatagttaagg-accaaaaatgcaatttagccta 26332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40969596 - 40969642
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  40969596 gcgatactaattaaatagttaagggaccaaaaatataatttaaccta 40969642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41208742 - 41208788
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| || ||||||| |||||| ||||    
T  41208742 gcgatactacctaaatagttaagggactaaaaatgcaatttagccta 41208788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43899416 - 43899462
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  43899416 gcgatattacctaaatagttaaggaaccaaaaatgcaatttagccta 43899462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7274697 - 7274656
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||| |||||| |||||||||| ||||||    
T  7274697 gcgatactacctaaatatttaagggaccaaaaatgcaattta 7274656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7937687 - 7937646
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||  |||||||||| ||||||    
T  7937687 gcgatactacctaaatagttaagcaaccaaaaatgcaattta 7937646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14353389 - 14353422
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  14353389 gcgatactacctaaatagttaagggaccaaaaat 14353422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 19124515 - 19124563
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattat 51  Q
    ||||||||||||||||||||||| ||||||||| ||||||| | ||||||    
T  19124515 cgatactacctaaatagttaagg-accaaaaatataatttagcttattat 19124563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26332363 - 26332322
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| || |||||||||| ||||||    
T  26332363 gcgatactacctaaatagttaggggaccaaaaatgcaattta 26332322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31513907 - 31513866
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  31513907 gcgatactacctaaatagttaatggaccaaaaatgcaattta 31513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44069465 - 44069498
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  44069465 gcgatactacctaaatagttaagggaccaaaaat 44069498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 45171409 - 45171450
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| || ||||||| ||||||    
T  45171409 gcgatactacctaaatagttaagggactaaaaatgcaattta 45171450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52609704 - 52609745
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||| ||||||||||||||||| |||||||||| ||||||    
T  52609704 gcgatagtacctaaatagttaagggaccaaaaatggaattta 52609745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 2829448 - 2829408
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaac 44  Q
    ||||||||||||||||||||| |||||||||  ||||||||    
T  2829448 atactacctaaatagttaagggaccaaaaatacaatttaac 2829408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 15862519 - 15862563
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| || ||||||| |||||| ||||    
T  15862519 gatactacctaaatagttaagggacaaaaaatgcaatttagccta 15862563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 41998158 - 41998202
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| |||||||||  |||||| ||||    
T  41998158 gatactacctaaatagttaagggaccaaaaatacaatttagccta 41998202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 43527066 - 43527026
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  43527066 cgatactacctaaatagttaagggatcaaaaatgcaattta 43527026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 45872032 - 45872064
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaat 34  Q
    ||||||||||||||||||||||| |||||||||    
T  45872032 cgatactacctaaatagttaagggaccaaaaat 45872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 50394377 - 50394413
Alignment:
Q  12 taaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  50394377 taaatagttaagggaccaaaaaggtaatttaacctat 50394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 51170724 - 51170764
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  51170724 cgatactacctaaatagttaagggatcaaaaatgcaattta 51170764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 54081328 - 54081284
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||| ||||||||||||||| |||||||||  |||||||||    
T  54081328 gcgatactgcctaaatagttaagggaccaaaaatacaatttaacc 54081284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1335 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold1335
Description:

Target: scaffold1335; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 152 - 92
Alignment:
Q  435 ttgtgacgaagaacctctgtaattaacttatggaaattagtgtatgatgatcctccaaaat 495  Q
    |||||| ||||||||||| | |||||||||||||||||| |||||||||||||||| ||||    
T  152 ttgtgatgaagaacctctttgattaacttatggaaattattgtatgatgatcctcccaaat 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 39912263 - 39912311
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctattat 51  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  39912263 gatactacctaaatagttaagggaccaaaaatgtaatttaaccttttat 39912311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 6843537 - 6843492
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||    
T  6843537 gatactacctaaatagttaagggaccaaaaatgcaatttaacctat 6843492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 37393520 - 37393473
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||    
T  37393520 cgatactacctaaatagttaagggaccaaaaatacaatttaacctatt 37393473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24456994 - 24457040
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  24456994 gcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 24457040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 30872824 - 30872774
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacctattatata 54  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||| |||||    
T  30872824 atactacctaaatagttaagggaccaaaaatgcaatttagcctataatata 30872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 31230958 - 31230996
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  31230958 atactacctaaatagttaagggaccaaaaatgtaattta 31230996  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 758388 - 758343
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  758388 gcgatactacctaaatagttaaggggccaaaaatgcaatttaacct 758343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24456778 - 24456737
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  24456778 gcgatactacctaaatagttaagggaccaaaaatgcaattta 24456737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35223818 - 35223765
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattatata 54  Q
    ||||||||||||||||||| |||| |||||||||| |||||| ||||| |||||    
T  35223818 gcgatactacctaaatagtaaagggaccaaaaatgcaatttagcctataatata 35223765  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37393819 - 37393860
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  37393819 gcgatactacctaaatagttaagggaccaaaaatgcaattta 37393860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40040206 - 40040165
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  40040206 gcgatactacctaaatagttaagggaccaaaaatgcaattta 40040165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26736169 - 26736125
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||||||||||  |||||||||| |||||||||    
T  26736169 gcgatactacctaaatagttaagagaccaaaaatgcaatttaacc 26736125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 31230655 - 31230616
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  31230655 gatactacctaaatagttaagggaccaaaaatgtagttta 31230616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 39240072 - 39240033
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  39240072 gatactacctaaatagttaagggaccaaaaatgcaattta 39240033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 39240362 - 39240405
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||| |||||| |||||||||| |||||||||    
T  39240362 cgatactacctaaataattaagggaccaaaaatgcaatttaacc 39240405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 119158 - 119120
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  119158 atactacctaaatagttaagggaccaaaaatgcaattta 119120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5417155 - 5417189
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatg 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  5417155 gcgatactacctaaatagttaagggaccaaaaatg 5417189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 8654285 - 8654323
Alignment:
Q  8 tacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  8654285 tacctaaatagttaagggaccaaaaatgcaatttaacct 8654323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 16645893 - 16645931
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  16645893 atactacctaaatagttaagggaccaaaaatgcaattta 16645931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23244857 - 23244903
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||| |||||||||||||| |||||||||| ||| |||||||    
T  23244857 gcgatactatctaaatagttaagggaccaaaaatgcaatctaaccta 23244903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 35224110 - 35224156
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||| |||||||||||||| |||||||||| |||||| |||||    
T  35224110 cgatactaactaaatagttaagggaccaaaaatgcaatttagcctat 35224156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 44678358 - 44678320
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  44678358 atactacctaaatagttaagggaccaaaaatgcaattta 44678320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1826133 - 1826166
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  1826133 gcgatactacctaaatagttaagggaccaaaaat 1826166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1860578 - 1860611
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  1860578 gcgatactacctaaatagttaagggaccaaaaat 1860611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 29027311 - 29027356
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||||  ||||||||| ||||||| ||||    
T  29027311 cgatactacctaaatagttaagagaccaaaaatataatttagccta 29027356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 3869292 - 3869324
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaat 34  Q
    ||||||||||||||||||||||| |||||||||    
T  3869292 cgatactacctaaatagttaagggaccaaaaat 3869324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 11639378 - 11639418
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| || ||||||| ||||||    
T  11639378 cgatactacctaaatagttaagggacgaaaaatgcaattta 11639418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 14920452 - 14920416
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatt 40  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  14920452 atactacctaaatagttaaggaaccaaaaatgcaatt 14920416  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32385153 - 32385201
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  32385153 gcgatactacctaaatagttaagggaccaaaaatgcaatttaacctatt 32385201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 24504283 - 24504327
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  24504283 cgatattacctaaatagttaagggaccaaaaatgtaatttaacct 24504327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 46621270 - 46621314
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  46621270 cgatactacctaaatagttaagggaccaaaaatgcaatttaacct 46621314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 11242808 - 11242847
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  11242808 gatactacctaaatagttaagggaccaaaaatgtaattta 11242847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 48209990 - 48209951
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  48209990 gatactacctaaatagttaagggaccaaaaatgtaattta 48209951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18862783 - 18862824
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  18862783 gcgatactacctaaatagttaagggaccaaaaatgcaattta 18862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21217891 - 21217850
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  21217891 gcgatactacctaaatagttaagggaccaaaaatgcaattta 21217850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33626206 - 33626247
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  33626206 gcgatactacctaaatagttaagggaccaaaaatgaaattta 33626247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44710447 - 44710406
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  44710447 gcgatactacctaaatagttaagggaccaaaaatgcaattta 44710406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 54136135 - 54136094
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  54136135 gcgatactacctaaatagttaagggaccaaaaatgcaattta 54136094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25218128 - 25218084
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||    
T  25218128 gcgatattacctaaatagttaagggaccaaaaatgaaatttaacc 25218084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33625908 - 33625868
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  33625908 gcgatactacctaaatagttaagggaccaaaaatgcaattt 33625868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33882291 - 33882331
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  33882291 gcgatactacctaaatagttaagggaccaaaaatgcaattt 33882331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45911623 - 45911579
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||||||||| | |||||||||| |||||||||    
T  45911623 gcgatactacctaaatagttaatgaaccaaaaatgcaatttaacc 45911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1205422 - 1205379
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaac 44  Q
    |||||||||||||||||||||||| ||||||| || ||||||||    
T  1205422 gcgatactacctaaatagttaagggaccaaaagtgcaatttaac 1205379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 9010849 - 9010888
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  9010849 gatactacctaaatagttaagggaccaaaaatataattta 9010888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 46200526 - 46200487
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  46200526 gatactacctaaatagttaagggaccaaaaatgcaattta 46200487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 46620968 - 46620925
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||    
T  46620968 atactacctaaatagttaagggaccaaaaatgcaatttgaccta 46620925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 10014506 - 10014468
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  10014506 atactacctaaatagttaagggaccaaaaatgcaattta 10014468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 10017856 - 10017818
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  10017856 atactacctaaatagttaagggaccaaaaatgcaattta 10017818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 10021647 - 10021609
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  10021647 atactacctaaatagttaagggaccaaaaatgcaattta 10021609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25058877 - 25058831
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||  || ||||||| |||||||||||    
T  25058877 gcgatactacctaaatagttaagagacaaaaaatgcaatttaaccta 25058831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29970237 - 29970195
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaa 43  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  29970237 gcgatactacctaaatagttatgggaccaaaaatgcaatttaa 29970195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38866442 - 38866396
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||  |||||| ||||    
T  38866442 gcgatactacctaaatagttaagggaccaaaaatacaatttagccta 38866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52914996 - 52914950
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||  |||||| ||||    
T  52914996 gcgatactacctaaatagttaagggaccaaaaatacaatttagccta 52914950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1205719 - 1205760
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||| ||||||||||||||| |||||||||| ||||||    
T  1205719 gcgatactgcctaaatagttaagggaccaaaaatgcaattta 1205760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 9010547 - 9010502
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||||| |||||| |||||||||| |||||| |||||    
T  9010547 gatactacctaaataattaagggaccaaaaatgcaatttagcctat 9010502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21218189 - 21218230
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| | |||||||| ||||||    
T  21218189 gcgatactacctaaatagttaagggatcaaaaatgcaattta 21218230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29864517 - 29864550
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  29864517 gcgatactacctaaatagttaagggaccaaaaat 29864550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32384697 - 32384664
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  32384697 gcgatactacctaaatagttaagggaccaaaaat 32384664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34958876 - 34958843
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  34958876 gcgatactacctaaatagttaagggaccaaaaat 34958843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34959173 - 34959218
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||| ||||||||||||||||| ||||||| || ||||||||||    
T  34959173 gcgataatacctaaatagttaagggaccaaaattgcaatttaacct 34959218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37515795 - 37515840
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||    
T  37515795 gcgatactacctaaatagttaagggactaaaaataaaatttaacct 37515840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44428557 - 44428516
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||| ||||||||||||||||||| |||||||| ||||||    
T  44428557 gcgataatacctaaatagttaaggtatcaaaaatgcaattta 44428516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45683161 - 45683120
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  45683161 gcgatactacctaaatagttaagagatcaaaaatgtaattta 45683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46535567 - 46535534
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  46535567 gcgatactacctaaatagttaagggaccaaaaat 46535534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1157247 - 1157203
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||| ||| ||||||||||||| |||||||||| |||||||||    
T  1157247 gcgatattacttaaatagttaagggaccaaaaatgcaatttaacc 1157203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1157548 - 1157592
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||||||||||| || ||||||  |||||||||    
T  1157548 gcgatactacctaaatagttaagggactaaaaatacaatttaacc 1157592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2738924 - 2738880
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||| ||||||||||||| | |||||||| |||||||||    
T  2738924 gcgatactacttaaatagttaagggatcaaaaatgcaatttaacc 2738880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 29970516 - 29970555
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  29970516 cgatactacctaaatagttaagg-accaaaaatgcaattta 29970555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38866742 - 38866786
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||||||||||| | |||||||  |||||||||    
T  38866742 gcgatactacctaaatagttaaggaatcaaaaatacaatttaacc 38866786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 10625149 - 10625103
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  10625149 cgatactacctaaatagttaagggaccaaaaatgtaatttagcctat 10625103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 8769323 - 8769280
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  8769323 atactacctaaatagttaagggaccaaaaatgcaatttaaccta 8769280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35085783 - 35085737
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  35085783 gcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 35085737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31715963 - 31716004
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  31715963 gcgatactacctaaatagttaagggaccaaaaatgcaattta 31716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 43726587 - 43726640
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacctattatataata 57  Q
    |||| |||||||||||||||| |||||||||| |||||| |||||||| |||||    
T  43726587 ataccacctaaatagttaagggaccaaaaatgcaatttagcctattatttaata 43726640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 10625428 - 10625467
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  10625428 gatactacctaaatagttaagggaccaaaaatgcaattta 10625467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 32706773 - 32706730
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||    
T  32706773 atactacctaaatagttaagggaccaaaaatgcaatttagccta 32706730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 39118053 - 39118010
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    ||||||||||||||||||||||| |||||||||  |||||||||    
T  39118053 cgatactacctaaatagttaagggaccaaaaatacaatttaacc 39118010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 47250890 - 47250929
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  47250890 gatactacctaaatagttaagggaccaaaaatgcaattta 47250929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23437196 - 23437150
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| | |||||||| |||||| ||||    
T  23437196 gcgatactacctaaatagttaaggaatcaaaaatgcaatttagccta 23437150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 37144106 - 37144152
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||  ||||||||||||| |||||||||| ||||||||||||    
T  37144106 cgatactaattaaatagttaagggaccaaaaatgcaatttaacctat 37144152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8769624 - 8769665
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| || ||||||| ||||||    
T  8769624 gcgatactacctaaatagttaagggactaaaaatgcaattta 8769665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18731063 - 18731022
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||| |||||||||||||| |||||||||| ||||||    
T  18731063 gcgatactatctaaatagttaagggaccaaaaatgcaattta 18731022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 23472636 - 23472591
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||||    
T  23472636 cgatactacctaaatagttaagggaccaaaaatacaatttagccta 23472591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23472898 - 23472939
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||| ||||||||||||||||||| |||||||||| ||||||    
T  23472898 gcgaaactacctaaatagttaagggaccaaaaatgcaattta 23472939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35086082 - 35086123
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  35086082 gcgatactacctaaatagttaaaggaccaaaaatgcaattta 35086123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43140742 - 43140697
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||| |||||||||||||| || ||||||| ||||||||||    
T  43140742 gcgatactatctaaatagttaagggactaaaaatgcaatttaacct 43140697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44486274 - 44486315
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  44486274 gcgatactacctaaatagttaaaggaccaaaaatgcaattta 44486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48704150 - 48704183
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  48704150 gcgatactacctaaatagttaagggaccaaaaat 48704183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 25088358 - 25088404
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  25088358 cgatactacctaaatagttaagggaccaaaaatataatttaacctat 25088404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29256876 - 29256831
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  29256876 gcgatactacctaaatagttaagggaccaaaaatataatttaacct 29256831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50921433 - 50921474
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  50921433 gcgatactacctaaatagttaagggaccaaaaatgtaattta 50921474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16268031 - 16268079
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  16268031 gcgatactacctaaatagttaagggaccaaaaatgcaatttagcctatt 16268079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30293354 - 30293398
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  30293354 gcgatactacctaaatagttaagggaccaaaaatgcaatttaacc 30293398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 37199265 - 37199309
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  37199265 gatactacctaaatagttaaggaaccaaaaatgcaatttaaccta 37199309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9881596 - 9881550
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  9881596 gcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 9881550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 19986466 - 19986512
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||    
T  19986466 gatactacctaaatagttaagggaccaaaaatgcaatttatcctatt 19986512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23281352 - 23281398
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  23281352 gcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 23281398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25088060 - 25088014
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  25088060 gcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 25088014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30293057 - 30293011
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||    
T  30293057 gcgatactacctaaatagttaatggaccaaaaatgcaatttaaccta 30293011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33753269 - 33753223
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  33753269 gcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 33753223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2125544 - 2125589
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||    
T  2125544 gcgatactacctaaataattaagggaccaaaaatgtaatttgacct 2125589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 34029065 - 34029110
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||    
T  34029065 gatactacctaaatagttaagggaccaaaaatgcaatttagcctat 34029110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51691918 - 51691877
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  51691918 gcgatactacctaaatagttaagggaccaaaaatgcaattta 51691877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 52412642 - 52412601
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  52412642 gcgatactacctaaatagttaagggaccaaaaatgtatttta 52412601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 14118572 - 14118528
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||    
T  14118572 gatactacctaaatagttaagggaccaaaaatgcaatttagccta 14118528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 34028763 - 34028719
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||    
T  34028763 gatactacctaaatagttaagggaccaaaaatgcaatttagccta 34028719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 45305753 - 45305797
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||    
T  45305753 gatactacctaaatagttaagggaccaaaaatgcaatttagccta 45305797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50118391 - 50118347
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||||||||||| |||||||||  |||||||||    
T  50118391 gcgatactacctaaatagttaagggaccaaaaatacaatttaacc 50118347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 50574860 - 50574904
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||    
T  50574860 cgatactacctaaatagttaagggaccaaaaatgcaatctaacct 50574904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10654371 - 10654414
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaac 44  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  10654371 gcgatactacctaaatagttaagggaccaaaaatgcaaattaac 10654414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 24590569 - 24590608
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  24590569 gatactacctaaatagttaagggaccaaaaatataattta 24590608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 28112762 - 28112719
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||    
T  28112762 atactacctaaatagttaagggaccaaaaatgcaatttagccta 28112719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 34279585 - 34279624
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  34279585 gatactacctaaatagttaagggaccaaaaatgcaattta 34279624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 50921102 - 50921063
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  50921102 gatactacctaaatagttaagggaccaaaaatgcaattta 50921063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 52412942 - 52412981
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  52412942 gataccacctaaatagttaagggaccaaaaatgtaattta 52412981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 30611254 - 30611216
Alignment:
Q  11 ctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  30611254 ctaaatagttaagggaccaaaaatgcaatttaacctatt 30611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10923406 - 10923365
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||| |||||| ||||||||| |||||||    
T  10923406 gcgatactacctaaataattaagggaccaaaaatataattta 10923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 13944554 - 13944509
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||| |||||||||||| | |||||||||| |||||||||||    
T  13944554 cgatactagctaaatagttaaaggaccaaaaatgcaatttaaccta 13944509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16267759 - 16267718
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||| ||||||||||||||||| |||||||||| ||||||    
T  16267759 gcgatattacctaaatagttaagggaccaaaaatgcaattta 16267718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18793735 - 18793694
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||| |||||| |||||||||| ||||||    
T  18793735 gcgatactacctaaataattaagggaccaaaaatgaaattta 18793694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19886026 - 19885981
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||  |||||||||||| |||||||||| ||||||||||    
T  19886026 gcgatactacaaaaatagttaagggaccaaaaatgcaatttaacct 19885981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28970463 - 28970422
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  28970463 gcgatactacctaaatagttaaaggaccaaaaatgcaattta 28970422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31125980 - 31125939
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| | |||||||| ||||||    
T  31125980 gcgatactacctaaatagttaagggatcaaaaatgcaattta 31125939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 32563994 - 32563949
Alignment:
Q  10 cctaaatagttaaggtaccaaaaatgtaatttaacctattatataa 55  Q
    ||||||||||||||| |||||||||| |||||| ||| ||||||||    
T  32563994 cctaaatagttaagggaccaaaaatgcaatttagccttttatataa 32563949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35986276 - 35986235
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| | |||||||| ||||||    
T  35986276 gcgatactacctaaatagttaagggaacaaaaatgcaattta 35986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 51810480 - 51810513
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  51810480 gcgatactacctaaatagttaagggaccaaaaat 51810513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 11395007 - 11395043
Alignment:
Q  6 actacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  11395007 actacctaaatagttaagggaccaaaaatgcaattta 11395043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 14776078 - 14776118
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||  |||||||||| ||||||    
T  14776078 cgatactacctaaatagttaagtgaccaaaaatgcaattta 14776118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 22584695 - 22584735
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||| ||||||||| ||||||||| |||||||    
T  22584695 cgatactacctaattagttaagggaccaaaaatataattta 22584735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24655630 - 24655586
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||    
T  24655630 gcgatactacctaaatacttaagggaccaaatatgcaatttaacc 24655586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 36077313 - 36077269
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||| |||||| |||||||||| |||||| ||||    
T  36077313 gatactacctaaataattaagggaccaaaaatgcaatttagccta 36077269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 51692213 - 51692253
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||| ||||||||||||||||| |||||||||| ||||||    
T  51692213 cgatattacctaaatagttaagggaccaaaaatgcaattta 51692253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24604919 - 24604874
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  24604919 gcgatactacctaaatagttaagggaccaaaaatgcaatttaacct 24604874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3338521 - 3338466
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattatataat 56  Q
    |||||||||||||||||||||||| || ||||||| |||||| ||||| |||||||    
T  3338521 gcgatactacctaaatagttaagggacaaaaaatgcaatttagcctataatataat 3338466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 24605216 - 24605254
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatt 40  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  24605216 cgatactacctaaatagttaagggaccaaaaatgtaatt 24605254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 33971969 - 33971927
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  33971969 atactacctaaatagttaagggaccaaaaatgcaatttaacct 33971927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 13156179 - 13156220
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  13156179 atactacctaaatagttaagggacaaaaaatgtaatttaacc 13156220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 13161035 - 13161076
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  13161035 atactacctaaatagttaagggacaaaaaatgtaatttaacc 13161076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1158632 - 1158593
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatt 40  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  1158632 gcgatactacctaaatagttaaaggaccaaaaatgtaatt 1158593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 1158931 - 1158965
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatg 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  1158931 gcgatactacttaaatagttaaggtaccaaaaatg 1158965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 33544863 - 33544821
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||    
T  33544863 atactacttaaatagttaagggaccaaaaatgcaatttaacct 33544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3288974 - 3288933
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||| ||||| ||||||    
T  3288974 gcgatactacctaaatagttaagggaccataaatgcaattta 3288933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9173945 - 9173912
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  9173945 gcgatactacctaaatagttaagggaccaaaaat 9173912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25551678 - 25551723
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||| ||||||||||||| |||||||||  ||||||||||    
T  25551678 gcgatactacttaaatagttaagggaccaaaaatacaatttaacct 25551723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31029568 - 31029523
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||| |||||| | |||||||| ||||||||||    
T  31029568 gcgatactacctaaataattaagggatcaaaaatgcaatttaacct 31029523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35132645 - 35132604
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  35132645 gcgatactacctaaatagttaatggaccaaaaatgcaattta 35132604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 11525108 - 11525148
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||| ||||||| |||||||||| ||||||    
T  11525108 cgatactacctaaattgttaagggaccaaaaatgcaattta 11525148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 13155882 - 13155842
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||  ||||||||| |||||||    
T  13155882 cgatactacctaaatagttaagagaccaaaaatataattta 13155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 13160738 - 13160698
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||  ||||||||| |||||||    
T  13160738 cgatactacctaaatagttaagagaccaaaaatataattta 13160698  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 33545166 - 33545210
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||| | ||||||||| ||||||| ||||    
T  33545166 gatactacctaaatagttaatgcaccaaaaatataatttagccta 33545210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 32933633 - 32933588
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||    
T  32933633 gatactacctaaatagttaagggaccaaaaatgcaatttaacctat 32933588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 4121106 - 4121149
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  4121106 cgatactacctaaatagttaagggaccaaaaatgcaatttaacc 4121149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 16655949 - 16655996
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||    
T  16655949 cgatactacctaaatagttaagggaccaaaaatacaatttaacctatt 16655996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27132555 - 27132508
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||    
T  27132555 gcgatactacctaaatagttaagggaccaaaaatacaatttaacctat 27132508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 37744491 - 37744452
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  37744491 gatactacctaaatagttaagggaccaaaaatgtaattta 37744452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43183925 - 43183972
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  43183925 gcgatactacctaaataattaagggaccaaaaatgcaatttaacctat 43183972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44610906 - 44610860
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||    
T  44610906 gcgatattacctaaatagttaagggaccaaaaatgcaatttaaccta 44610860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4104203 - 4104162
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  4104203 gcgatactacctaaatagttaagggaccaaaaatgcaattta 4104162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12303829 - 12303788
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  12303829 gcgatactacctaaatagttaagggaccaaaaatgcaattta 12303788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16736145 - 16736104
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  16736145 gcgatactacctaaatagttaagggaccaaaaatgcaattta 16736104  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18565345 - 18565386
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  18565345 gcgatactacctaaatagttaagggaccaaaaatgcaattta 18565386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31450710 - 31450669
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  31450710 gcgatactacctaaatagttaagggaccaaaaatgcaattta 31450669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43183627 - 43183586
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  43183627 gcgatactacctaaatagttaagggactaaaaatgtaattta 43183586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 17856534 - 17856578
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||    
T  17856534 atactacctaaatagttaagggaccaaaaatgcaatttagcctat 17856578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28631318 - 28631278
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattt 41  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  28631318 gcgatgctacctaaatagttaagggaccaaaaatgtaattt 28631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39150167 - 39150215
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||||||||| | |||||||||| |||||| ||||||    
T  39150167 gcgatactacctaaatagttaaaggaccaaaaatgcaatttagcctatt 39150215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 40694238 - 40694198
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  40694238 cgatactacctaaatagttaagggaccaaaaatataattta 40694198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 34484277 - 34484234
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||||||||||||| | |||||||||| ||||||||||    
T  34484277 gatactacctaaatagttaaaggaccaaaaatgcaatttaacct 34484234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 41377698 - 41377737
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  41377698 gatactacctaaatagttaagggaccaaaaatgcaattta 41377737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 12304127 - 12304161
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatg 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  12304127 gcgatactacctaaatagttaagggaccaaaaatg 12304161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 16260915 - 16260881
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatg 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  16260915 gcgatactacctaaatagttaagggaccaaaaatg 16260881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34820621 - 34820667
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||    
T  34820621 gcgagactacctaaatagttaagggaccaaaaatacaatttaaccta 34820667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4104501 - 4104534
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  4104501 gcgatactacctaaatagttaagggaccaaaaat 4104534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4120808 - 4120767
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| || ||||||| ||||||    
T  4120808 gcgatactacctaaatagttaagggacaaaaaatgcaattta 4120767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5961713 - 5961672
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||||  ||||||||| ||||||    
T  5961713 gcgatactacctaaatagttaaggggccaaaaatgcaattta 5961672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16261212 - 16261245
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  16261212 gcgatactacctaaatagttaagggaccaaaaat 16261245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20908853 - 20908886
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  20908853 gcgatactacctaaatagttaagggaccaaaaat 20908886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28202904 - 28202863
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||| ||||||||||||||||| |||||||||| ||||||    
T  28202904 gcgatattacctaaatagttaagggaccaaaaatgcaattta 28202863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28203202 - 28203243
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||| |||||||||||||||| |||||||||| ||||||    
T  28203202 gcgatacgacctaaatagttaagggaccaaaaatgcaattta 28203243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28631616 - 28631661
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||| |||||||||||| |||||||||  ||||||||||    
T  28631616 gcgatactacccaaatagttaagggaccaaaaatacaatttaacct 28631661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32933933 - 32933974
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||| ||||||||||||||||| |||||||||| ||||||    
T  32933933 gcgatattacctaaatagttaagggaccaaaaatgcaattta 32933974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34820323 - 34820278
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  34820323 gcgatactacttaaatagttaagggaccaaaaatgcaatttgacct 34820278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37412637 - 37412596
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||| |||||||||||||| |||||||||| ||||||    
T  37412637 gcgatactaactaaatagttaagggaccaaaaatgcaattta 37412596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37744730 - 37744775
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||| |||||||||||||| | |||||||| ||||||||||    
T  37744730 gcgatactatctaaatagttaaggaatcaaaaatgcaatttaacct 37744775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 39454493 - 39454448
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||| ||||||||||||| |||||||||| |||||| |||||    
T  39454493 gatactacttaaatagttaagggaccaaaaatgcaatttagcctat 39454448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39912671 - 39912638
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  39912671 gcgatactacctaaatagttaagggaccaaaaat 39912638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 5720175 - 5720139
Alignment:
Q  12 taaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  5720175 taaatagttaagggaccaaaaatgcaatttaacctat 5720139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12304496 - 12304544
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||| ||||||| || ||||||| |||||| ||||||    
T  12304496 gcgatactacctaaattgttaagggacaaaaaatgcaatttagcctatt 12304544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18565110 - 18565062
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||| ||||||||||||||  |||||||||| |||||| ||||||    
T  18565110 gcgatactgcctaaatagttaagagaccaaaaatgcaatttagcctatt 18565062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 20297453 - 20297413
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||| ||||||||||| |||||||||| ||||||    
T  20297453 cgatactacctgaatagttaagggaccaaaaatgaaattta 20297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 27132857 - 27132893
Alignment:
Q  6 actacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  27132857 actacctaaatagttaagggaccaaaaatgcaattta 27132893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 27476710 - 27476750
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||  |||||||||| ||||||    
T  27476710 cgatactacctaaatagttaagagaccaaaaatgcaattta 27476750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 31451009 - 31451049
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  31451009 cgatactacctaaatagttaagggatcaaaaatgcaattta 31451049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7399121 - 7399073
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  7399121 gcgatactacctaaatagttaagggaccaaaaatgcaatttagcctatt 7399073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15476310 - 15476266
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  15476310 gcgatactacctaaatagttaagggaccaaaaatataatttaacc 15476266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35263538 - 35263487
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattata 52  Q
    |||||||||||||||||||||||| |||||||||| |||||| |||| ||||    
T  35263538 gcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaatata 35263487  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8418526 - 8418567
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  8418526 gcgatactacctaaatagttaagggaccaaaaatgcaattta 8418567  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19205285 - 19205330
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||    
T  19205285 gcgatactacctaaatagttaagggatcaaaaatgcaatttaacct 19205330  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 19615464 - 19615419
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||    
T  19615464 gatactacctaaatagtcaagggaccaaaaatgcaatttaacctat 19615419  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29023981 - 29023940
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  29023981 gcgatactacctaaatagttaagggaccaaaaatgcaattta 29023940  T

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Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 40589397 - 40589442
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||    
T  40589397 cgatactacctaaatagttaaggaaccaaaaatgcaatttagccta 40589442  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 40590000 - 40590045
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||    
T  40590000 cgatactacctaaatagttaaggaaccaaaaatgcaatttagccta 40590045  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12593500 - 12593452
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    |||||||||||||||||||||||| | |||||||| |||||| ||||||    
T  12593500 gcgatactacctaaatagttaagggatcaaaaatgcaatttagcctatt 12593452  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 15670494 - 15670538
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||    
T  15670494 cgatactacctaaatagttaagggaccaaaaatacaatttaacct 15670538  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 19204986 - 19204942
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||    
T  19204986 gatactacctaaatagttaagggaccaaaaatgcaatttagccta 19204942  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 31909273 - 31909317
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||    
T  31909273 cgatactacctaaacagttaagggaccaaaaatgcaatttaacct 31909317  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 12593801 - 12593844
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||| | || |||||||||||||||||||    
T  12593801 atactacctaaatagttaaaggactaaaaatgtaatttaaccta 12593844  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 33699318 - 33699271
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaacctatt 49  Q
    ||||||||||||||||||||||| |||| ||||| |||||| ||||||    
T  33699318 cgatactacctaaatagttaagggaccataaatgcaatttagcctatt 33699271  T

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Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36752243 - 36752290
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctat 48  Q
    |||||||||| ||||||||||||| |||||||||| |||||| |||||    
T  36752243 gcgatactacataaatagttaagggaccaaaaatgcaatttagcctat 36752290  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5088470 - 5088520
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattat 51  Q
    |||||||||||||||||||||||  |||||||||  |||||| ||||||||    
T  5088470 gcgatactacctaaatagttaagagaccaaaaatacaatttagcctattat 5088520  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5087851 - 5087818
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  5087851 gcgatactacctaaatagttaagggaccaaaaat 5087818  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10656138 - 10656105
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  10656138 gcgatactacctaaatagttaagggaccaaaaat 10656105  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10656436 - 10656477
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| | |||||||| ||||||    
T  10656436 gcgatactacctaaatagttaagggatcaaaaatgcaattta 10656477  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 15267284 - 15267240
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||    
T  15267284 cgatactacctaa-tagttaagggaccaaaaatgcaatttaaccta 15267240  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 21750853 - 21750808
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    ||||||||||||||||||||||| |||||||| | |||||| ||||    
T  21750853 cgatactacctaaatagttaagggaccaaaaaggcaatttagccta 21750808  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26289064 - 26289031
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  26289064 gcgatactacctaaatagttaagggaccaaaaat 26289031  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 39706396 - 39706433
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  39706396 atactacctaaatagttaagggaccaaaaatgcaattt 39706433  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42710692 - 42710725
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  42710692 gcgatactacctaaatagttaagggaccaaaaat 42710725  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5460288 - 5460332
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    ||||||||| |||||||||||||| |||||||||  |||||||||    
T  5460288 gcgatactatctaaatagttaagggaccaaaaatacaatttaacc 5460332  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 9693261 - 9693301
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||| ||||||| |||||||||| ||||||    
T  9693261 cgatactacctaaatcgttaagggaccaaaaatgcaattta 9693301  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 18514330 - 18514286
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||| ||||||||||||||| |||||||||| |||||| ||||    
T  18514330 gatacttcctaaatagttaagggaccaaaaatgcaatttagccta 18514286  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31656402 - 31656370
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  31656402 gcgatactacctaaatagttaagggaccaaaaa 31656370  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 40589093 - 40589057
Alignment:
Q  6 actacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  40589093 actacctaaatagttaagggaccaaaaatgcaattta 40589057  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 40589696 - 40589660
Alignment:
Q  6 actacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  40589696 actacctaaatagttaagggaccaaaaatgcaattta 40589660  T

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Target: scaffold0809 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4660 - 4706
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 47  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||    
T  4660 gcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 4706  T

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Target: scaffold0809; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 4380 - 4337
Alignment:
Q  3 gatactacctaaatagttaaggtaccaaaaatgtaatttaacct 46  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||    
T  4380 gatagtacctaaatagttaagggaccaaaaatgcaatttaacct 4337  T

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Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11829 - 11870
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  11829 gcgatactacctaaatagttaagggaccaaaaatgcaattta 11870  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 66082 - 66122
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  66082 cgatactacctaaatagttaagcgaccaaaaatgtaattta 66122  T

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Target: scaffold0045; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 73414 - 73454
Alignment:
Q  2 cgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  73414 cgatactacctaaatagttaagcgaccaaaaatgtaattta 73454  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 40697 - 40735
Alignment:
Q  4 atactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  40697 atactacctaaatagttaagggaccaaaaatgcaattta 40735  T

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Target: scaffold0444 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11683 - 11642
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaattta 42  Q
    |||||| ||||||||||||||||||| |||||||| ||||||    
T  11683 gcgataatacctaaatagttaaggtatcaaaaatgcaattta 11642  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13883 - 13927
Alignment:
Q  1 gcgatactacctaaatagttaaggtaccaaaaatgtaatttaacc 45  Q
    ||||||||||||||||||||| || |||||||||  |||||||||    
T  13883 gcgatactacctaaatagttaggggaccaaaaatacaatttaacc 13927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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