View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3248_low_21 (Length: 274)
Name: NF3248_low_21
Description: NF3248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3248_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 43099523 - 43099270
Alignment:
| Q |
1 |
ccaaccaacacatagcaagaccatgttacgagtacaattcgaagttctcgattattttgtggataacagggtatcttttggtattactgatggaagagtt |
100 |
Q |
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| T |
43099523 |
ccaaccaacacatagcaagaccatgttacgagtacaattcgaagttctcgattattttgtggataacagtgtatctttcggtattactgatggaagagtt |
43099424 |
T |
|
| Q |
101 |
cgtggatttgtgcaatttggggtggtggtgaatactttgattaagatggatgggttgtttcatccgagtgaatatcacttgaaggttacatgcaaacctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
43099423 |
cgtggatttgtgcaatttggggtggtggtgaatactttgattaagatggatgggttgtttcatccgagtgaatatcgcttgaaggttacatgcaaacctt |
43099324 |
T |
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| Q |
201 |
tgaactttggaattccatcgtccaacattaacaacgttacttgggaattattgg |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43099323 |
tgaactttggaattccatcgtccaacattaacaacgttacttgggaattattgg |
43099270 |
T |
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