View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3248_low_32 (Length: 238)
Name: NF3248_low_32
Description: NF3248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3248_low_32 |
 |  |
|
| [»] chr5 (14 HSPs) |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 37412501 - 37412618
Alignment:
| Q |
121 |
accttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggtgaaattccttattccatagg |
220 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37412501 |
accttattgtaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggtgaaattccttattccatagg |
37412600 |
T |
 |
| Q |
221 |
tcagttgaagtctctcaa |
238 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
37412601 |
tcagttgaagtctctcaa |
37412618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 37697842 - 37697612
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| | |||||| |||||||||||| || |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37697842 |
agaatttgtcatcctctttggtttctcttagtctacgaaacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagatt |
37697743 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||| |||| | |||||| ||| ||||||||| || ||||||||||||||||||||||||||| || ||||||| ||| |||||||||| |
|
|
| T |
37697742 |
ggatttgtcatttaatcaaaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttagacctctcttacactgctttctcaggt |
37697643 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagt |
231 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |
|
|
| T |
37697642 |
gaaattccttattccataggtcaattgaagt |
37697612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37824950 - 37824716
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| | |||||| |||||||||||| || |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37824950 |
agaatttgtcatcctctttggtttctcttagtctacgaaacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagatt |
37824851 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||| |||| | |||||| ||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| || ||| |||||| |
|
|
| T |
37824850 |
ggatttgtcatttaatcataaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggacctctcttcctctgctttttcaggt |
37824751 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37824750 |
gaaattccttattccataggtcaattgaagtctct |
37824716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37534155 - 37533921
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| | ||| |||||||||||||| |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37534155 |
agaatttgtcatcctctttggtttctcttagtctatcagaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagatt |
37534056 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
||||||||||||||||| |||||| ||| ||||||||| || ||||||||||||||||||||||||||||| |||||||| || ||| |||||| |
|
|
| T |
37534055 |
ggatttgtcatctaatgataaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggt |
37533956 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37533955 |
gaaattccttattccataggtcaattgaagtctct |
37533921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37640927 - 37640693
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37640927 |
agaatttgtcatcctctttggtttctcttagtctacgaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagatt |
37640828 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||| |||| | |||||| ||| ||||||||| || |||||||||||||||||||||||||||| | ||| |||| || |||||||||| |
|
|
| T |
37640827 |
ggatttgtcatttaatcaaaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttgaacctccgtttatctgctttctcaggt |
37640728 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37640727 |
gaaattccttattccataggtcaattgaagtctct |
37640693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37712679 - 37712445
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| | ||||| |||||||||||| || |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37712679 |
agaatttgtcatcctctttggtttctcttagtctacgagacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagatt |
37712580 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||| |||| | |||||| ||| ||||||||| || ||||||||||||||||||||||||||||| ||||||| || ||| |||||| |
|
|
| T |
37712579 |
ggatttgtcatttaatcaaaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctcttcctctgctttttcaggt |
37712480 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37712479 |
gaaattccttattccataggtcaattgaagtctct |
37712445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 37436761 - 37436528
Alignment:
| Q |
2 |
gaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaacta |
101 |
Q |
| |
|
|||||||||||| ||| |||| ||||||||||||| |||| |||||||||||||| |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37436761 |
gaatttgtcatcttctttggtttctcttagtctagcatccactcagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattg |
37436662 |
T |
 |
| Q |
102 |
gatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggtg |
201 |
Q |
| |
|
|||||||||| |||| | |||||| ||| ||||||||| || |||||||||||||||||||||||||||| | ||| |||| || ||||||||||| |
|
|
| T |
37436661 |
gatttgtcatttaatcaaaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttgaacctccgtttatctgctttctcaggtg |
37436562 |
T |
 |
| Q |
202 |
aaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |
|
|
| T |
37436561 |
aaattccttattccataggtcaattgaagtctct |
37436528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 37595379 - 37595149
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||| | |||||| | |||||||||||||| |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37595379 |
agaatttttcatcctctttggtttctcttcttctacgaaacactgggttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagatt |
37595280 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||| |||||| |||||| ||| ||||||||| || ||||| |||||||||||||||||||||| | ||| |||| || ||| |||||| |
|
|
| T |
37595279 |
ggatttgtcatttaatgataaccttagtggtcaacttccaaagtccaacttgagcactcctctaaggtacttgaacctccgtttatctgctttttcaggt |
37595180 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagt |
231 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |
|
|
| T |
37595179 |
gaaattccttattccataggtcaattgaagt |
37595149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37412419 - 37412504
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacct |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37412419 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacattccctctttacct |
37412504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 37399917 - 37400147
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| | ||| |||||||||||||| |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37399917 |
agaatttgtcatcctctttggtttctcttagtctatcagaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagatt |
37400016 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||| |||| | |||||| ||| ||||||||| || ||||||||||||||||||||||||||||| ||||||| || ||| |||||| |
|
|
| T |
37400017 |
ggatttgtcatttaatcaaaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctcttcctctgctttttcaggt |
37400116 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagt |
231 |
Q |
| |
|
|||||||| ||||||||||| || ||||||| |
|
|
| T |
37400117 |
gaaattccctattccataggccaattgaagt |
37400147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 37381440 - 37381674
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||| ||||||| | ||| | |||||||||||||| |||||||| | | ||||||||||||||| ||| ||| |
|
|
| T |
37381440 |
agaatttgtcatcctctttggtttctcttggtctaggagaaactgggttgcaaggaaatttgtcaagtgacatcctctctttacctaatctccaaacact |
37381539 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||| ||||||||| | | || | | ||||||| | | |||||||||||||||| | ||||||||||| |||||| || |||||||||| |
|
|
| T |
37381540 |
agatttatcatctaataaatatctgagcagtcaacttccgaaatccaactggagcactcctttgaggtacttggacctctctcgcacccctttctcaggt |
37381639 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |
|
|
| T |
37381640 |
gaaattccttattccataggccagttgaagtctct |
37381674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37703723 - 37703489
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||| | ||| |||||||||||||| |||||||| | | ||||||||||||||||||| | | |
|
|
| T |
37703723 |
agaatttgtcatcctctttggtttctcttagtctatcagaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagatt |
37703624 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||| ||| | |||||| ||| ||||||||| | |||||||||| |||||||||| |||||| | ||||||| || ||| |||||| |
|
|
| T |
37703623 |
ggatttgtcattcaattataaccttagtggtcaacttccaaaatccaactggagctctcctctaagatacttgaacctctcttcctctgctttttcaggt |
37703524 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37703523 |
gaaattccttattccataggtcaattgaagtctct |
37703489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 37429720 - 37429616
Alignment:
| Q |
77 |
ctctttacctaatcttcaagaactagatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggat |
176 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | |||||||||||||| ||| ||||||||| ||| ||||||||||||||| |||||||||||||| |
|
|
| T |
37429720 |
ctctttaccaaatcttcaagaactagatttgtcttttaatgaggaccttagtgggaaacttccactgtccaactggagcactcccctaaggtacttggac |
37429621 |
T |
 |
| Q |
177 |
ctctc |
181 |
Q |
| |
|
||||| |
|
|
| T |
37429620 |
ctctc |
37429616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 37392066 - 37392237
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||| ||||||||||| |||| |||||||| ||||| | | | | |||||||||||||| |||||| | | | ||||||||||||||||||| ||| |
|
|
| T |
37392066 |
agaatgtgtcatcctctttggtttctcttaggctaggagaaattgggttgcaaggaaatttgtcaagtgccatcctctctttacctaatcttcaaagact |
37392165 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttgga |
175 |
Q |
| |
|
|||||||||| ||| | || |||| || |||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
37392166 |
agatttgtca---aataatgaacttagcggtaaacttccaaaatcaaactggagcactcctctaaggtacttgga |
37392237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 24216845 - 24217075
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||| | |||||||||||| | |||||||| | | ||||||||| ||||||||| |||| |
|
|
| T |
24216845 |
agaatttgtcatcctctttggtttctcttagtctagcatccactggattgcaaggaaatatgtcaagtgacatcctctctttaccaaatcttcaaaaact |
24216944 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
|||||||||||| ||| | |||||| ||| ||| |||||| || ||||||||||||||| |||||||||||||| |||||||| || |||||||||| |
|
|
| T |
24216945 |
agatttgtcatcgaatcaagaccttcgtggtaaatttccaacgtccaactggagcactcccctaaggtacttggacctctctttctctggtttctcaggt |
24217044 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagt |
231 |
Q |
| |
|
|||||| | || || || ||||||||||||| |
|
|
| T |
24217045 |
gaaatttcatactctattggtcagttgaagt |
24217075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 16841983 - 16842215
Alignment:
| Q |
3 |
aatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaactag |
102 |
Q |
| |
|
||||||||||||||| |||| |||||| ||||| |||||| |||||||||||||||| ||||||| | | |||||| | ||||||||| ||||| |
|
|
| T |
16841983 |
aatttgtcatcctctttggtttctcttcatctagcaaacactggtttgcaaggaaatttgttaagtgacatactctctttgtcaaatcttcaaagactag |
16842082 |
T |
 |
| Q |
103 |
atttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggtga |
202 |
Q |
| |
|
|||||||| |||| | ||||||| ||| ||||||||| | |||||||||||||||||||||||||||| | |||||| ||| ||||||||| || |
|
|
| T |
16842083 |
atttgtcacataatcaagaccttagtggtcaacttccaaaatccaactggagcactcctctaaggtacttgtacctctctcatactgctttctcaggaga |
16842182 |
T |
 |
| Q |
203 |
aattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
||| | |||||||||||||| || |||||||| |
|
|
| T |
16842183 |
aatctcctattccataggtcaattaaagtctct |
16842215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 14554093 - 14553859
Alignment:
| Q |
1 |
agaatttgtcatcctctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacgttccctctttacctaatcttcaagaact |
100 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| ||||| | |||||||||||||| |||||||| | | |||||| || ||||||||| |||| |
|
|
| T |
14554093 |
agaatttgtcatcctctttggtttctcttagtctagcaaacaccgggttgcaaggaaatttgtcaagtgacatactctctttgccaaatcttcaaaaact |
14553994 |
T |
 |
| Q |
101 |
agatttgtcatctaatgaggaccttattggaaaacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggt |
200 |
Q |
| |
|
||||||| | |||||| | |||| ||| ||||||||| | ||||||||| |||||||||||||||||| | ||| || || |||||||||| |
|
|
| T |
14553993 |
agatttggtaggtaatgatggtcttagtggtcaacttccaaaatccaactggagtactcctctaaggtacttgtacctccattactctgctttctcaggt |
14553894 |
T |
 |
| Q |
201 |
gaaattccttattccataggtcagttgaagtctct |
235 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14553893 |
gaaattccttattccataggtcaattgaagtctct |
14553859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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