View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3252_high_39 (Length: 232)
Name: NF3252_high_39
Description: NF3252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3252_high_39 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 45984504 - 45984724
Alignment:
| Q |
1 |
atataaacaatgttggtcggccttcctaacaaacaacaaatgcatgatcagaatcaaatagtttttcattcacaatgaattttgatccttttaaatggag |
100 |
Q |
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| T |
45984504 |
atataaacaatgttggtcggccttcctaacaaacaacaaatgcatgatcagaatcaaatagtttttcattcacaatgaattttgatccttttaaatggag |
45984603 |
T |
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| Q |
101 |
actatatcattggatttgtctttaggtttgggctaattagggtatgggggagtgtgaatgtgatggaagtctgattctgttcctagcggcagcggcgtgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
45984604 |
actatatcattggatttgtctttaggtttgggctaattagggtatgggggagtgtgaatgtgagggaagtctgattctgttcctagcggcagcggcgtgt |
45984703 |
T |
|
| Q |
201 |
ggaacaaacataggcacatac |
221 |
Q |
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||||||||||||||||||||| |
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| T |
45984704 |
ggaacaaacataggcacatac |
45984724 |
T |
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