View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3253_high_4 (Length: 543)

Name: NF3253_high_4
Description: NF3253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3253_high_4
NF3253_high_4
[»] chr5 (12 HSPs)
chr5 (15-517)||(1725126-1725625)
chr5 (100-457)||(1739535-1739898)
chr5 (103-431)||(1744904-1745235)
chr5 (290-526)||(1724850-1725086)
chr5 (381-519)||(1724719-1724857)
chr5 (85-159)||(1715374-1715448)
chr5 (291-379)||(1763747-1763835)
chr5 (360-519)||(1739308-1739467)
chr5 (143-330)||(1760728-1760914)
chr5 (370-459)||(1744705-1744800)
chr5 (461-509)||(1760559-1760607)
chr5 (132-172)||(1763953-1763993)
[»] chr3 (5 HSPs)
chr3 (299-423)||(3167617-3167741)
chr3 (245-409)||(3156496-3156660)
chr3 (299-416)||(3138818-3138935)
chr3 (299-517)||(2023090-2023308)
chr3 (461-515)||(3138974-3139025)
[»] chr8 (2 HSPs)
chr8 (299-448)||(23852457-23852609)
chr8 (322-364)||(23856930-23856972)
[»] chr7 (3 HSPs)
chr7 (263-415)||(7490787-7490933)
chr7 (344-415)||(7484108-7484179)
chr7 (370-421)||(9011749-9011800)


Alignment Details
Target: chr5 (Bit Score: 439; Significance: 0; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 15 - 517
Target Start/End: Complemental strand, 1725625 - 1725126
Alignment:
Q  15 cagagagtatcaatatcgatcaatttaaaatagcagttatatagagagtatcaagtnnnnnnnnnnnnntatactaagacttaagttcaactagagagta 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||| |||||||||    
T  1725625 cagagagtatcaatatcgatcaatttaaaatagcagttatatagagagtatcaagtaaaaaaaaaa---tatactaagacttaagttcaaatagagagta 1725529  T
Q  115 tcaatcaaatcagcagcaacattgacatgaaaacaaaatataaaaactaaatttaaagtcttagtgacaaatcaagcccacatgaatcataattggagga 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1725528 tcaatcaaatcagcagcaacattgacatgaaaacaaaatataaaaactaaatttaaagtcttagtgacaaatcaagcccacatgaatcataattggagga 1725429  T
Q  215 ttcttcttcggctttgaacttcgacatatcaatatcatccttggtggtagtagcatccacaatatttttattgtttatgattgcgtttgaacttgtagca 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1725428 ttcttcttcagctttgaacttcgacatatcaatatcatccttggtggtagtagcatccacaatatttttattttttatgattgcgtttgaacttgtagca 1725329  T
Q  315 acatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccaccaccaatacctagaattc 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1725328 acatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccaccaccaatacctagaattc 1725229  T
Q  415 cagccccattataactactctccatatttctcaaactaacaagaggaagagaagggtttaacatctcttgcaaacccaaagtaccattactatacccaaa 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  1725228 cagccccattataactactctccatatttctcaaactaacaagaggaagagaagggtttaacatctcttgcaaacacaaagcaccattactatacccaaa 1725129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 100 - 457
Target Start/End: Complemental strand, 1739898 - 1739535
Alignment:
Q  100 ttcaactagagagtatcaatcaaatcagcagcaacattgacatgaaaacaaaatataaaaactaaatttaaagtcttagtgacaaatcaagcccacatga 199  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| || ||||| |||||||||||| | ||    
T  1739898 ttcaactagagagtagcaatcaaatcaacagcaacattgacatgaaaacaaaatataaaaattgaatttaaagcctaagtgataaatcaagcccagacga 1739799  T
Q  200 atcataattggaggattcttcttcggctttgaacttcgacatatcaatatcatccttggtggtagtagcatccacaatatttttattgtttatgattgcg 299  Q
    |||||||||||||||||||||||| |  || ||||| |||| |||||||| ||||||||| ||||||  |||| || |||||||||||||||||||||      
T  1739798 atcataattggaggattcttcttccgagttaaacttagacagatcaatattatccttggtagtagtatgatcctcactatttttattgtttatgattgta 1739699  T
Q  300 tttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccaccac 399  Q
     |||||||||||||||||| | |||||||||||||  |||| | |||||||||||| || | ||| ||  ||||||||||||| |||| |||| ||||||    
T  1739698 cttgaacttgtagcaacatttgtagaagaatctccagattttataatagcaccaatcttgtcattcgtaccatcttcaatcctcgaagcagttgcaccac 1739599  T
Q  400 caatacctagaattccagccccattataa------ctactctccatatttctcaaactaacaag 457  Q
    |||  |||||||||||||||||| ||| |      |||| ||||||||||||||||||||||||    
T  1739598 caaatcctagaattccagccccactattactattgctaccctccatatttctcaaactaacaag 1739535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 103 - 431
Target Start/End: Complemental strand, 1745235 - 1744904
Alignment:
Q  103 aactagagagtatcaatcaaatcagcagcaacattgacatgaaaacaaaatataaaaactaaatttaaagtcttagtgacaaatcaagcccacatgaatc 202  Q
    |||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||| || ||||| |||||||||||| | |||||    
T  1745235 aactagagagtagcaatcaaattaacagcaacattgccatgaaaacaaaatataaaaactgaatttaaagcctaagtgataaatcaagcccagacgaatc 1745136  T
Q  203 ataattggaggattcttcttcggctttgaacttcgacatatcaatatcatcct---tggtggtagtagcatccacaatatttttattgtttatgattgcg 299  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||||||   |||| ||||||| ||||||| ||||||||||||||||||||| |    
T  1745135 ataattggaggattcttcttctgcgttgaacttcgacaaatcaatatcatccttgctggtagtagtaggatccacactatttttattgtttatgattgtg 1745036  T
Q  300 tttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccaccac 399  Q
     |||||||||| ||||||| | |||||||||||||  |||||  |||||||||||| || |||||  |  |||||||||||||||||| |||| ||||||    
T  1745035 cttgaacttgtggcaacatttgtagaagaatctccaaatttagtaatagcaccaatcttgttattcataccatcttcaatccttgaagcagttgcaccac 1744936  T
Q  400 caatacctagaattccagccccattataacta 431  Q
    |||  |||| |||||||| |||| ||| ||||    
T  1744935 caaatcctaaaattccagtcccactattacta 1744904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 290 - 526
Target Start/End: Complemental strand, 1725086 - 1724850
Alignment:
Q  290 tatgattgcgtttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagta 389  Q
    |||||||| ||||||||||| |||||||| |||  |||||||||| || || | |||  ||| |||||| |||||| ||  ||||||||||||||||| |    
T  1725086 tatgattgagtttgaacttgaagcaacatttttgaaagaatctccgcactttagaatgccacaaattttgttatttttgctatcttcaatccttgaagca 1724987  T
Q  390 gttccaccaccaatacctagaattccagccccatta------taactactctccatatttctcaaactaacaagaggaagagaagggtttaacatctctt 483  Q
    ||||||||||||||||||||||  ||| | ||| ||      | ||||| |||||||||| |||||||||||| ||      ||||||||||||||||||    
T  1724986 gttccaccaccaatacctagaaccccaactccactagtactattactaccctccatatttttcaaactaacaaaag------aagggtttaacatctctt 1724893  T
Q  484 gcaaacccaaagtaccattactatacccaaaagggcttgaagt 526  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1724892 gcaaacccaaagtaccattactatacccaaaagggcttgaagt 1724850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 381 - 519
Target Start/End: Complemental strand, 1724857 - 1724719
Alignment:
Q  381 cttgaagtagttccaccaccaatacctagaattccagcccca------ttataactactctccatatttctcaaactaacaagaggaagagaagggttta 474  Q
    |||||||||||||||||||||||||||||||| ||| | |||      |||| ||||| ||||||||||||||||||||||||||      |||||||||    
T  1724857 cttgaagtagttccaccaccaatacctagaatcccaactccactattattattactaccctccatatttctcaaactaacaagag------aagggttta 1724764  T
Q  475 acatctcttgcaaacccaaagtaccattactatacccaaaagggc 519  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  1724763 acatctcttgcaaacccaaagcaccattattatacccaaaagggc 1724719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 1715374 - 1715448
Alignment:
Q  85 atactaagacttaagttcaactagagagtatcaatcaaatcagcagcaacattgacatgaaaacaaaatataaaa 159  Q
    |||| ||||| ||||||| ||||||||||| ||||||||| | ||  |||||||||||| |||||||||||||||    
T  1715374 ataccaagacataagttccactagagagtaacaatcaaattaacaataacattgacatggaaacaaaatataaaa 1715448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 1763835 - 1763747
Alignment:
Q  291 atgattgcgtttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaat 379  Q
    ||||||| ||| |||||||||||||| | |   |||||||||||| ||||||||| | ||||||| |||||||||||||| ||| ||||    
T  1763835 atgattgagttagaacttgtagcaacgtttgaggaagaatctcccaatttaaaaaaaacaccaatattattatttgtgtcttctccaat 1763747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 519
Target Start/End: Complemental strand, 1739467 - 1739308
Alignment:
Q  360 ttatttgtgtcatcttcaatccttgaagtagttccaccaccaatacctagaattccagcccc------attataactactctccatatttctcaaactaa 453  Q
    ||||||||  |||||||||||||||||||||||  ||||||||  |||||||||||  ||||      | ||| |||||||||||| |||||||||| ||    
T  1739467 ttatttgtaccatcttcaatccttgaagtagttgaaccaccaaatcctagaattcccaccccacggttactattactactctccatgtttctcaaaccaa 1739368  T
Q  454 caagaggaagagaagggtttaacatctcttgcaaacccaaagtaccattactatacccaaaagggc 519  Q
    |      ||||||||| ||||| || |||| ||||  ||||  ||||||||||||| |||||||||    
T  1739367 c------aagagaaggatttaatatatctttcaaatgcaaatcaccattactatactcaaaagggc 1739308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 330
Target Start/End: Complemental strand, 1760914 - 1760728
Alignment:
Q  143 gaaaacaaaatataaaaactaaatttaaagtcttagtgacaaatcaagcccacatgaatcataattggaggattcttcttcggctttgaacttcgacata 242  Q
    ||||||||||||||||| || |||||||||  | ||||| ||||||||| || | || ||  |||||||||||||||||||    |||||||| ||   |    
T  1760914 gaaaacaaaatataaaa-ctgaatttaaagcttaagtgataaatcaagcgcataagattccgaattggaggattcttcttcaaagttgaactttgattga 1760816  T
Q  243 tcaatatcatccttggtggtagtagcatccacaatatttttattgtttatgattgcgtttgaacttgtagcaacatgtttagaagaat 330  Q
    | ||||||||| | |||   ||||  |  |||| |||||||||||| |||||||| ||||||||||||| ||| || | |||||||||    
T  1760815 tgaatatcatcttcggtataagtaagagacacattatttttattgtgtatgattgagtttgaacttgtatcaatatttgtagaagaat 1760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 1744800 - 1744705
Alignment:
Q  370 catcttcaatccttgaagtagttccaccaccaatacctagaattccagcccc------attataactactctccatatttctcaaactaacaagag 459  Q
    |||||||||||||||||||| || |||||||||  |||||||||||  ||||      | ||| |||||||||||| ||||||||||||| |||||    
T  1744800 catcttcaatccttgaagtaattgcaccaccaaatcctagaattcctaccccacgattactattactactctccatgtttctcaaactaataagag 1744705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 509
Target Start/End: Complemental strand, 1760607 - 1760559
Alignment:
Q  461 aagagaagggtttaacatctcttgcaaacccaaagtaccattactatac 509  Q
    ||||||||||||||| ||||||| ||||| ||||  |||||||||||||    
T  1760607 aagagaagggtttaatatctctttcaaactcaaaacaccattactatac 1760559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 1763993 - 1763953
Alignment:
Q  132 aacattgacatgaaaacaaaatataaaaactaaatttaaag 172  Q
    ||||| |||||| |||||||||||||||||| |||||||||    
T  1763993 aacatcgacatggaaacaaaatataaaaactgaatttaaag 1763953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 299 - 423
Target Start/End: Complemental strand, 3167741 - 3167617
Alignment:
Q  299 gtttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccacca 398  Q
    |||||||||||||||||||| | |||||||||||||  |||| | ||||||||||||||||||||||||  ||||||| |||||||||||| || |||||    
T  3167741 gtttgaacttgtagcaacatttgtagaagaatctcctaattttagaatagcaccaattttattatttgtaccatcttctatccttgaagtacttgcacca 3167642  T
Q  399 ccaatacctagaattccagccccat 423  Q
    |||||||| ||||||||| ||||||    
T  3167641 ccaataccaagaattccaaccccat 3167617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 409
Target Start/End: Original strand, 3156496 - 3156660
Alignment:
Q  245 aatatcatccttggtggtagtagcatccacaatatttttattgtttatgattgcgtttgaacttgtagcaacatgtttagaagaatctccccatttaaaa 344  Q
    ||||||||| ||||| | ||||| | |||||||| |||  || | |||| ||| ||||||||||| |||||||| | |||||||||||||  |||| | |    
T  3156496 aatatcatctttggtagaagtaggagccacaataatttgcttttctatgtttgagtttgaacttgcagcaacatttgtagaagaatctcctaattttaga 3156595  T
Q  345 atagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccaccaccaatacctag 409  Q
    |||||||| ||||||||||||||  |||||||||||||||||||| || ||||||||||| ||||    
T  3156596 atagcacctattttattatttgtaccatcttcaatccttgaagtacttgcaccaccaatagctag 3156660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 299 - 416
Target Start/End: Original strand, 3138818 - 3138935
Alignment:
Q  299 gtttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccacca 398  Q
    ||||||| |||||||||| | | |||||||||||||| |||  |||||||||||||||||||||| |||  ||| ||| ||| ||||||||||| |||||    
T  3138818 gtttgaaattgtagcaacctttgtagaagaatctcccaattctaaaatagcaccaattttattatatgtaccatattcgatctttgaagtagttgcacca 3138917  T
Q  399 ccaatacctagaattcca 416  Q
    |||||||||||| |||||    
T  3138918 ccaatacctagatttcca 3138935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 299 - 517
Target Start/End: Complemental strand, 2023308 - 2023090
Alignment:
Q  299 gtttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccacca 398  Q
    |||||||||||| | ||||| | ||||||||||| |  | || | | ||| ||||||||||||||||    |||||||||||||| |||||||| || |     
T  2023308 gtttgaacttgttgtaacatttgtagaagaatcttcaaactttagattagtaccaattttattattttcaccatcttcaatccttaaagtagttgcatcc 2023209  T
Q  399 ccaatacctagaattccagccccattataactact------ctccatatttctcaaactaacaagaggaagagaagggtttaacatctcttgcaaaccca 492  Q
    ||  |||||||||||||| ||| |  || |||| |      ||||||||||||||||||||||||||      |||||||||| ||||||||||||||||    
T  2023208 ccggtacctagaattccaaccctagaattactattactgccctccatatttctcaaactaacaagag------aagggtttaatatctcttgcaaaccca 2023115  T
Q  493 aagtaccattactatacccaaaagg 517  Q
    ||  |||||||| ||||||||||||    
T  2023114 aaccaccattaccatacccaaaagg 2023090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 515
Target Start/End: Original strand, 3138974 - 3139025
Alignment:
Q  461 aagagaagggtttaacatctcttgcaaacccaaagtaccattactatacccaaaa 515  Q
    |||||||||||||||||||||||||||   ||||| || || |||||||||||||    
T  3138974 aagagaagggtttaacatctcttgcaa---caaagcactatgactatacccaaaa 3139025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 299 - 448
Target Start/End: Complemental strand, 23852609 - 23852457
Alignment:
Q  299 gtttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttat---tatttgtgtcatcttcaatccttgaagtagttcca 395  Q
    ||||||||||||||||| || | |||||||||||||| |||| |||||||||||||||||||   |||||||  ||||||| || |||||||||||| ||    
T  23852609 gtttgaacttgtagcaatatttgtagaagaatctcccaattttaaaatagcaccaattttattattatttgtaccatcttcgattcttgaagtagttgca 23852510  T
Q  396 ccaccaatacctagaattccagccccattataactactctccatatttctcaa 448  Q
    || |||||||||||  |||||  |||  ||| ||||| | |||||||||||||    
T  23852509 ccgccaatacctaggtttccaaaccctctattactaccccccatatttctcaa 23852457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 23856972 - 23856930
Alignment:
Q  322 tagaagaatctccccatttaaaaatagcaccaattttattatt 364  Q
    |||||||| ||||| |||| |||||||||||||||||||||||    
T  23856972 tagaagaaactcccaattttaaaatagcaccaattttattatt 23856930  T

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Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 415
Target Start/End: Original strand, 7490787 - 7490933
Alignment:
Q  263 agtagcatccacaatatttttattgtttatgattgcgtttgaacttgtagcaacatgtttagaagaatctccccatttaaaaatagcaccaattttatta 362  Q
    ||||||| |||||| |||||| |||||| || ||| | |||||||||||||||      |||||||||||||   ||| | |||||||||||||||||||    
T  7490787 agtagcagccacaacatttttcttgtttgtgtttgagcttgaacttgtagcaa------tagaagaatctccaagttttagaatagcaccaattttatta 7490880  T
Q  363 tttgtgtcatcttcaatccttgaagtagttccaccaccaatacctagaattcc 415  Q
    |||||  |||||||||| ||||||||| || | ||||||| ||||||| ||||    
T  7490881 tttgtaccatcttcaattcttgaagtacttgctccaccaaaacctagagttcc 7490933  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 415
Target Start/End: Original strand, 7484108 - 7484179
Alignment:
Q  344 aatagcaccaattttattatttgtgtcatcttcaatccttgaagtagttccaccaccaatacctagaattcc 415  Q
    ||||||||||||||||||||||||  |||||| ||| ||||||||| || | ||||||| ||||||| ||||    
T  7484108 aatagcaccaattttattatttgtaccatctttaattcttgaagtacttgctccaccaaaacctagagttcc 7484179  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 9011749 - 9011800
Alignment:
Q  370 catcttcaatccttgaagtagttccaccaccaatacctagaattccagcccc 421  Q
    ||||||||||| ||||| ||||| |||||||||  |||||||||||||||||    
T  9011749 catcttcaatctttgaactagttgcaccaccaaaccctagaattccagcccc 9011800  T

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