View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3253_low_42 (Length: 213)

Name: NF3253_low_42
Description: NF3253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3253_low_42
NF3253_low_42
[»] chr2 (15 HSPs)
chr2 (1-197)||(32080489-32080685)
chr2 (1-153)||(17973822-17973974)
chr2 (1-153)||(30652386-30652538)
chr2 (1-153)||(9183889-9184041)
chr2 (1-161)||(13290152-13290313)
chr2 (1-139)||(24536489-24536627)
chr2 (23-163)||(27441784-27441924)
chr2 (1-154)||(15445763-15445917)
chr2 (1-153)||(25483241-25483394)
chr2 (1-153)||(25490847-25491000)
chr2 (9-139)||(3175326-3175457)
chr2 (36-139)||(44629989-44630092)
chr2 (96-127)||(42727757-42727788)
chr2 (96-127)||(44758909-44758940)
chr2 (9-54)||(27567131-27567176)
[»] chr8 (13 HSPs)
chr8 (1-153)||(4241477-4241629)
chr8 (1-153)||(17021737-17021884)
chr8 (1-153)||(17552174-17552321)
chr8 (99-161)||(4540984-4541047)
chr8 (9-160)||(8329783-8329935)
chr8 (9-57)||(21960025-21960073)
chr8 (90-125)||(28860276-28860311)
chr8 (9-59)||(19431254-19431304)
chr8 (9-59)||(19567403-19567453)
chr8 (96-127)||(21648391-21648422)
chr8 (96-127)||(32011453-32011484)
chr8 (9-55)||(7005244-7005290)
chr8 (70-136)||(19950939-19951005)
[»] chr6 (13 HSPs)
chr6 (1-153)||(16834633-16834785)
chr6 (9-161)||(2881041-2881195)
chr6 (9-117)||(2861790-2861899)
chr6 (68-154)||(5496360-5496447)
chr6 (10-136)||(12797251-12797376)
chr6 (13-139)||(22693930-22694055)
chr6 (90-153)||(19992968-19993032)
chr6 (9-59)||(17289129-17289179)
chr6 (9-59)||(19479357-19479407)
chr6 (9-59)||(10486316-10486366)
chr6 (96-127)||(22702555-22702586)
chr6 (96-127)||(29514605-29514636)
chr6 (90-138)||(19479275-19479323)
[»] chr5 (12 HSPs)
chr5 (1-153)||(558241-558393)
chr5 (1-153)||(41998187-41998339)
chr5 (1-153)||(36940661-36940813)
chr5 (1-153)||(39519857-39520009)
chr5 (1-153)||(26668750-26668901)
chr5 (1-153)||(26940347-26940498)
chr5 (1-153)||(36425110-36425261)
chr5 (1-125)||(17549961-17550086)
chr5 (97-161)||(41318897-41318962)
chr5 (96-127)||(17505830-17505861)
chr5 (96-127)||(24775667-24775698)
chr5 (96-127)||(42020739-42020770)
[»] chr4 (18 HSPs)
chr4 (1-153)||(37263035-37263187)
chr4 (1-139)||(19103462-19103599)
chr4 (1-153)||(12875809-12875961)
chr4 (9-139)||(7899359-7899489)
chr4 (37-139)||(33467568-33467670)
chr4 (1-153)||(8028803-8028954)
chr4 (1-153)||(13060936-13061088)
chr4 (1-103)||(19907792-19907893)
chr4 (2-59)||(16949491-16949548)
chr4 (10-139)||(17681577-17681705)
chr4 (96-127)||(8984594-8984625)
chr4 (96-127)||(13696265-13696296)
chr4 (96-127)||(21304142-21304173)
chr4 (96-127)||(39999996-40000027)
chr4 (96-127)||(54344130-54344161)
chr4 (96-127)||(54992349-54992380)
chr4 (13-51)||(24491317-24491355)
chr4 (99-139)||(24491226-24491266)
[»] chr3 (10 HSPs)
chr3 (1-153)||(3674111-3674263)
chr3 (1-153)||(8884715-8884867)
chr3 (1-153)||(23664593-23664745)
chr3 (1-153)||(18468684-18468836)
chr3 (1-127)||(12970281-12970406)
chr3 (99-161)||(16452890-16452953)
chr3 (96-127)||(3481256-3481287)
chr3 (96-127)||(15767328-15767359)
chr3 (96-127)||(17359073-17359104)
chr3 (96-127)||(20094923-20094954)
[»] chr1 (8 HSPs)
chr1 (1-153)||(10136797-10136949)
chr1 (1-153)||(25845228-25845380)
chr1 (1-133)||(11807690-11807821)
chr1 (1-139)||(16037101-16037238)
chr1 (12-131)||(27306885-27307004)
chr1 (96-162)||(5725837-5725904)
chr1 (96-127)||(27712198-27712229)
chr1 (96-127)||(37408725-37408756)
[»] chr7 (14 HSPs)
chr7 (1-153)||(12802752-12802905)
chr7 (9-153)||(10391574-10391718)
chr7 (1-122)||(14784017-14784139)
chr7 (1-125)||(15234047-15234172)
chr7 (1-137)||(1044808-1044945)
chr7 (36-139)||(2596255-2596357)
chr7 (89-153)||(15975340-15975405)
chr7 (11-80)||(15976232-15976301)
chr7 (96-127)||(17496608-17496639)
chr7 (96-127)||(17556575-17556606)
chr7 (96-127)||(33238930-33238961)
chr7 (96-127)||(47994727-47994758)
chr7 (98-138)||(7018152-7018192)
chr7 (98-138)||(7033510-7033550)
[»] scaffold0070 (2 HSPs)
scaffold0070 (9-139)||(59966-60096)
scaffold0070 (9-139)||(64168-64298)
[»] scaffold0061 (1 HSPs)
scaffold0061 (9-139)||(48362-48492)
[»] scaffold0017 (1 HSPs)
scaffold0017 (9-139)||(150141-150271)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-139)||(21295-21432)
[»] scaffold0060 (1 HSPs)
scaffold0060 (9-139)||(51317-51447)
[»] scaffold0015 (1 HSPs)
scaffold0015 (9-57)||(212775-212823)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-112)||(6693-6804)
[»] scaffold0011 (1 HSPs)
scaffold0011 (9-139)||(2764-2896)
[»] scaffold0166 (1 HSPs)
scaffold0166 (96-127)||(18050-18081)
[»] scaffold0014 (1 HSPs)
scaffold0014 (96-127)||(27300-27331)
[»] scaffold0067 (1 HSPs)
scaffold0067 (9-59)||(32831-32881)


Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 32080685 - 32080489
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  32080685 agaaataggttcaatgggcaataacaagtcatgatgtgatagaacatgctatgataaaattagagaagcatgattcttgcagccacaagaggatgagata 32080586  T
Q  101 atagaaactcttaatgagatctatactatatgtggagtgagtacctagctacaaaagtactttgaactagtgttgtgtgaaatttgatggaaattgg 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32080585 atagaaactcttaatgagatctatactatatgtggagtgagtacctagctacaaaagtactttgaactagtgttgtgtgaaatttgaaggaaattgg 32080489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17973822 - 17973974
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  17973822 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 17973920  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17973921 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 17973974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 30652538 - 30652386
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  30652538 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 30652440  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  30652439 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 30652386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 9183889 - 9184041
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   || ||||||||||  ||  |||  ||||| |||||    
T  9183889 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaaacatgattcctgtagtgacagaaggatgagata 9183987  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9183988 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 9184041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 13290152 - 13290313
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| ||||||| | ||||||| |||||||  |||||||||||||||||||||||| |||| ||||||||||||| || | ||| |||||| |||||    
T  13290152 agaaataggttcaattgataataactagtcatgaagtgatagaacatgctatgataaaactagataagcatgattcctgcaacgacaggaggatgagata 13290251  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctacaaaagtact 161  Q
    |||| ||||||||||||| || ||||| |||||||||| |||||| ||||| ||| ||||||    
T  13290252 ataggaactcttaatgaggtcgatactttatgtggagtggagtacatagctgcaagagtact 13290313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 24536489 - 24536627
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaa-gcatgattcctacagccacaagaggataagat 99  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||||||||| |||| |  |||| |||||| |||| |||| | | |||||| ||||    
T  24536489 agaaataggttcaatgggtaataacaagtcatgat-tgatagaacatgctatgagaaaaattaagaaagcatgaatcctgcagcgataggaggatgagat 24536587  T
Q  100 aatagaaactcttaatgagatctatactatatgtggagtg 139  Q
    |||||||| ||||||||||||||||||| ||||| |||||    
T  24536588 aatagaaaatcttaatgagatctatactctatgttgagtg 24536627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 27441784 - 27441924
Alignment:
Q  23 aacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaactcttaatgagatct 122  Q
    ||||||| || | ||||| || |||| |||| ||||| |||| ||| |||||| ||| ||| ||||||||||||||||||||||| |||||||||||| |    
T  27441784 aacaagtaattgagtgatggagcatgatatggtaaaactagaaaagaatgatttctaaagcaacaagaggataagataatagaaattcttaatgagatat 27441883  T
Q  123 atactatatgtggagtgagtacctagctacaaaagtacttt 163  Q
    ||||| |||||||| ||||||| ||||||||| | ||||||    
T  27441884 atactttatgtggattgagtacttagctacaagattacttt 27441924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 15445763 - 15445917
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||| ||| ||||||| ||||| || |||||| ||| |||||||||| || ||||||||||||| |  | | |||||||||| |||||    
T  15445763 agaaataggttcaatgagtattaacaagccatggagtaatagaatatgttatgataaaactaaagaagcatgattcatgaatcaacaagaggatgagata 15445862  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctacaa 154  Q
    ||  |||||||||||| |||||||| | |||||||||| |||||| |||||||||    
T  15445863 attaaaactcttaatgtgatctataatctatgtggagtggagtacatagctacaa 15445917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 25483241 - 25483394
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa--ttagagaagcatgattcctacagccacaagaggataaga 98  Q
    ||||||| |||||||||||||||||||||||||  |||||| |||||||||||| ||||  | ||| ||||||||||||| |||  |||  | | | |||    
T  25483241 agaaataggttcaatgggtaataacaagtcatga-gtgatacaacatgctatgaaaaaaagtaaga-aagcatgattcctgcagtgacagaaagttgaga 25483338  T
Q  99 taatagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  25483339 taatagaaactcttaatgagatctatactctacgtggagtggagtacatagctaca 25483394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 25490847 - 25491000
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa--ttagagaagcatgattcctacagccacaagaggataaga 98  Q
    ||||||| |||||||||||||||||||||||||  |||||| |||||||||||| ||||  | ||| ||||||||||||| |||  |||  | | | |||    
T  25490847 agaaataggttcaatgggtaataacaagtcatga-gtgatacaacatgctatgaaaaaaagtaaga-aagcatgattcctgcagtgacagaatgttgaga 25490944  T
Q  99 taatagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||    
T  25490945 taatagaaactcttaatgagatctatactctacgtggagtggagtacatagctaca 25491000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 3175326 - 3175457
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaac 108  Q
    ||||||||||||||| ||||||||  ||||||||| ||||||||||||||| ||||||||||| ||||||||| | |||  |||||  ||||||||| |     
T  3175326 gttcaatgggtaatatcaagtcata-tgtgatagaccatgctatgataaaactagagaagcataattcctacaacgacagaaggatgcgataatagacat 3175424  T
Q  109 tcttaatgag--atctatactatatgtggagtg 139  Q
    ||||||||||  || |||||| |||||||||||    
T  3175425 tcttaatgagatatatatactctatgtggagtg 3175457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 44629989 - 44630092
Alignment:
Q  36 gtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaactcttaatgagatctatactatatgtgg 135  Q
    ||||||||||||||||||| |||| ||   |||||||| |||| ||||   | |||| | |||||||||||||||||||||||||||||||| |||||||    
T  44629989 gtgatagaacatgctatgagaaaagtaagaaagcatgaatcctgcagcgttatgaggttgagataatagaaactcttaatgagatctatactctatgtgg 44630088  T
Q  136 agtg 139  Q
    ||||    
T  44630089 agtg 44630092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 42727757 - 42727788
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  42727757 agataatagaaactcttaatgagatctatact 42727788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 44758909 - 44758940
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  44758909 agataatagaaactcttaatgagatctatact 44758940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 27567176 - 27567131
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatga 54  Q
    ||||||||||||||||| |||||||  |||||||||||| ||||||    
T  27567176 gttcaatgggtaataaccagtcatgaagtgatagaacattctatga 27567131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4241477 - 4241629
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  4241477 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 4241575  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  4241576 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 4241629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17021884 - 17021737
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||     |||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  17021884 agaaataggttcaatgggtaataacaagtcatga-gtga-----catgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 17021791  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17021790 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 17021737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17552321 - 17552174
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||     |||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  17552321 agaaataggttcaatgggtaataacaagtcatga-gtga-----catgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 17552228  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17552227 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 17552174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 4540984 - 4541047
Alignment:
Q  99 taatagaaactcttaatgagatctatactatatgtggagt-gagtacctagctacaaaagtact 161  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||    
T  4540984 taatataaactcttaatgagatctatactctatgtggagtggagtacctagctacaagagtact 4541047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 8329783 - 8329935
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaa-gcatgattcctacagccacaagaggataagataatagaaa 107  Q
    |||||||||||||||||||||||||  ||| || ||||| |||||||||  ||  |||| ||||||| ||| |||| | |  ||||| || |||||||||    
T  8329783 gttcaatgggtaataacaagtcatgaagtggtaaaacatactatgataaggtttaagaaagcatgat-cctgcagcgaaagaaggatgaggtaatagaaa 8329881  T
Q  108 ctcttaatgagatctatactatatgtggagt-gagtacctagctacaaaagtac 160  Q
    ||||||||||| |||||||| ||||| |||| | |||||||| ||||| |||||    
T  8329882 ctcttaatgaggtctatactctatgttgagtggggtacctagttacaagagtac 8329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 21960073 - 21960025
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa 57  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  21960073 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgataa 21960025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 28860311 - 28860276
Alignment:
Q  90 aggataagataatagaaactcttaatgagatctata 125  Q
    ||||||||||||||||||||||||||||||||||||    
T  28860311 aggataagataatagaaactcttaatgagatctata 28860276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 19431304 - 19431254
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa 59  Q
    |||||||||||||||||||||||||  |||||||||||| |||||| ||||    
T  19431304 gttcaatgggtaataacaagtcatgaagtgatagaacatactatgagaaaa 19431254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 19567453 - 19567403
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa 59  Q
    |||||||||||||||||||||||||  |||||||||||| |||||| ||||    
T  19567453 gttcaatgggtaataacaagtcatgaagtgatagaacatactatgagaaaa 19567403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 21648391 - 21648422
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  21648391 agataatagaaactcttaatgagatctatact 21648422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 32011484 - 32011453
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  32011484 agataatagaaactcttaatgagatctatact 32011453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 7005290 - 7005244
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgat 55  Q
    |||||||| ||||||||||||||||| |||||| |||||| ||||||    
T  7005290 gttcaatgagtaataacaagtcatggagtgataaaacatgttatgat 7005244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 19951005 - 19950939
Alignment:
Q  70 atgattcctacagccacaagaggataagataatagaaactcttaatgagatctatactatatgtgga 136  Q
    |||||||||  ||| | |||||| | || ||||| ||||||||||||||||||||||| ||||||||    
T  19951005 atgattcctgaagcgataagaggttgagttaatataaactcttaatgagatctatactctatgtgga 19950939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 16834633 - 16834785
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  16834633 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 16834731  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  16834732 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 16834785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 2881041 - 2881195
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaat-tagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||  ||||||||  ||||| | |||||| |||||| |||||    
T  2881041 gttcaatgggtaataacaagtcatgttgtgatagaacatgctatgataaaatctagaaaagtctgattcctgtagccaaatgaggatgagataagagaaa 2881140  T
Q  108 ctcttaatgagatctatactatatgtggagtg-agtacctagctacaaaagtact 161  Q
    |||| ||||| |||  ||| ||||||||| || |||||  |||||||| ||||||    
T  2881141 ctctaaatgatatcattaccatatgtggattgtagtacaaagctacaagagtact 2881195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 2861790 - 2861899
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaat-tagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||  | ||||||  ||||| | |||||| |||||| |||||    
T  2861790 gttcaatgggtaataacaagtcatgttgtgatagaacatgctatgacaaaatctagaaaagtcttattcctgtagccaaatgaggatgagataagagaaa 2861889  T
Q  108 ctcttaatga 117  Q
    |||| |||||    
T  2861890 ctctaaatga 2861899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 154
Target Start/End: Complemental strand, 5496447 - 5496360
Alignment:
Q  68 gcatgattcctacagccacaagaggataagataatagaaactcttaatgagatctatactatatgtggagt-gagtacctagctacaa 154  Q
    |||||||||||  ||| | |||||| | ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  5496447 gcatgattcctgaagcaataagaggttgagataatagaaactcttaatgagatatatactctatgtggagtggagtacctagctacaa 5496360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 12797251 - 12797376
Alignment:
Q  10 ttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaact 109  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||   |||| |||||| | |||    | |||||| |||||||||||| |    
T  12797251 ttcaatgggtaataacaagtcacga-gtgatagaacatgctatgataaaattaagaaagcttgattcttgcagtgttaggaggatgagataatagaaatt 12797349  T
Q  110 cttaatgagatctatactatatgtgga 136  Q
    |||||| |||| |||||| ||||||||    
T  12797350 cttaatcagatgtatactctatgtgga 12797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 22693930 - 22694055
Alignment:
Q  13 aatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaactctt 112  Q
    ||||||||| || ||||||||  || ||||||| |||||||| |||||||   |||||| | || | |||| ||| || ||| |||||||||||||||||    
T  22693930 aatgggtaagaaaaagtcatga-gtaatagaacgtgctatgagaaaattaagaaagcataaatcttgcagcgacaggatgatgagataatagaaactctt 22694028  T
Q  113 aatgagatctatactatatgtggagtg 139  Q
    ||||||||||||||| |||||||||||    
T  22694029 aatgagatctatactctatgtggagtg 22694055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 19992968 - 19993032
Alignment:
Q  90 aggataagataatagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  19992968 aggatgagataatagaaactcttaatgagatctatactatatgttgagtggagtacatagctaca 19993032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 17289129 - 17289179
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa 59  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  17289129 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgagaaaa 17289179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 19479407 - 19479357
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa 59  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  19479407 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgagaaaa 19479357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 10486366 - 10486316
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa 59  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  10486366 gttcaatgggtaataacaaatcatgaagtgatagaacatgctatgagaaaa 10486316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 22702555 - 22702586
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  22702555 agataatagaaactcttaatgagatctatact 22702586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 29514605 - 29514636
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  29514605 agataatagaaactcttaatgagatctatact 29514636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 19479323 - 19479275
Alignment:
Q  90 aggataagataatagaaactcttaatgagatctatactatatgtggagt 138  Q
    ||||| || |||||| |||||||||||||||||||||| ||||| ||||    
T  19479323 aggatgagttaatagcaactcttaatgagatctatactctatgttgagt 19479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 7e-39; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 558393 - 558241
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  558393 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 558295  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  558294 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 558241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 41998339 - 41998187
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  41998339 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 41998241  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  41998240 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 41998187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 36940661 - 36940813
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| ||||||||||| |||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  36940661 agaaataggttcaatgggtgataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 36940759  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  36940760 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 36940813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 39520009 - 39519857
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   |||||||||||||  ||  |||  ||||| |||||    
T  39520009 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaaataagaaagcatgattcctggagtgacagaaggatgagata 39519911  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  39519910 atagaaactcttaatgagatctctactctatgtggagtggagtacctagctaca 39519857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 26668901 - 26668750
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||| ||   ||||||||||||| |||   ||  ||||| |||||    
T  26668901 agaaataggttcaatgggtaataacaagtcat-gagtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtggcagaaggatgagata 26668803  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  26668802 atagaaactcttaatgaga-ctatactctatgtggagtggagtacctagctaca 26668750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 26940498 - 26940347
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||| ||   ||||||||||||| |||   ||  ||||| |||||    
T  26940498 agaaataggttcaatgggtaataacaagtcat-gagtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtggcagaaggatgagata 26940400  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  26940399 atagaaactcttaatgaga-ctatactctatgtggagtggagtacctagctaca 26940347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 36425261 - 36425110
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||| ||||||||||  |||| ||||||||| |||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  36425261 agaaataggttcaatgggtaatgacaagtcatga-gtgaaagaacatgc-atgagaaaagtaagaaagcatgattcctgcagtgacataaggatgagata 36425164  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  36425163 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 36425110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17549961 - 17550086
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgata-gaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagat 99  Q
    |||||||  ||||||||||||||| ||||||||   ||||| |||||||||| ||||||| |||||||||||||||| |  ||  ||| || || |||||    
T  17549961 agaaatagattcaatgggtaataataagtcatgagatgataagaacatgctacgataaaactagagaagcatgattcttgaagtaacatgaagaaaagat 17550060  T
Q  100 aatagaaactcttaatgagatctata 125  Q
    ||||| ||||||||||||||||||||    
T  17550061 aataggaactcttaatgagatctata 17550086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 41318897 - 41318962
Alignment:
Q  97 gataatagaaactcttaatgagatctatactatatgtggagtg-agtacctagctacaaaagtact 161  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||    
T  41318897 gataatagaaactcttaatgagatctatactctatgtggagtgtagtatctagctacaagagtact 41318962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 17505861 - 17505830
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  17505861 agataatagaaactcttaatgagatctatact 17505830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 24775667 - 24775698
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  24775667 agataatagaaactcttaatgagatctatact 24775698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 42020770 - 42020739
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  42020770 agataatagaaactcttaatgagatctatact 42020739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 37263035 - 37263187
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  37263035 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 37263133  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  37263134 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 37263187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 19103599 - 19103462
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   |||||||| || | |||| | | |||| | |||||    
T  19103599 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgaatcatgcagcgatatgaggttgagata 19103501  T
Q  101 atagaaactcttaatgagatctatactatatgtggagtg 139  Q
    ||||||||||||||||||||||||| | |||| ||||||    
T  19103500 atagaaactcttaatgagatctatattctatgcggagtg 19103462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12875961 - 12875809
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||| | |   ||||||||||||| ||||   | |||||| | |||    
T  12875961 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgacaaagtaaagaaagcatgattcctccagcgttaggaggatgaaata 12875863  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
     || ||||||||||||||||||||||| ||| |||||| |||||| ||||||||    
T  12875862 gtaaaaactcttaatgagatctatactctatatggagtggagtacatagctaca 12875809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 7899359 - 7899489
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa-aattagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||   |||||||| |||| |||  | |  ||||| || |||||||||    
T  7899359 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgataaggattaagaaagcatga-tcctgcagtgaaagaaggatgaggtaatagaaa 7899457  T
Q  108 ctcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||| ||||||||| ||||| |||||    
T  7899458 ctcttaatgaaatctatactctatgttgagtg 7899489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 33467568 - 33467670
Alignment:
Q  37 tgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaactcttaatgagatctatactatatgtgga 136  Q
    |||||||||||||||||| |||| ||   ||||||||||||| |||  | |  ||||| |||||||||||||||||||||||||||||||| ||||| ||    
T  33467568 tgatagaacatgctatgacaaaagtaagaaagcatgattcctgcagtgatagaaggatgagataatagaaactcttaatgagatctatactctatgttga 33467667  T
Q  137 gtg 139  Q
    |||    
T  33467668 gtg 33467670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 8028803 - 8028954
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| ||||||||||||||||||||| |||  ||||| ||||||||||||| |||||||   |||||||| |||| |||| | |  ||||| |||||    
T  8028803 agaaataggttcaatgggtaataacaagt-atga-gtgattgaacatgctatgagaaaattaagaaagcatgaatcctgcagcgatagaaggatgagata 8028900  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||| || |||||||||||| |||| || ||||| |||| |||||| ||||||||    
T  8028901 atataatctcttaatgagacctatcctctatgttgagtggagtacatagctaca 8028954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 13061088 - 13060936
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||| ||||||||||||||||||    ||||||||||||||||||| || | ||   || |||||||||| | |  | |  ||||| |||||    
T  13061088 agaaataggttcgatgggtaataacaagtcacaa-gtgatagaacatgctatgacaagagtaagaaaccatgattcctgcggtgatagaaggatgagata 13060990  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||    
T  13060989 atagaaactcttaatgagatctatactctatgttgagtggagtacatagctaca 13060936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19907893 - 19907792
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||||||||||||| |||||||||||||| | |||| |||||||||||||| |||||||   |||||||| |||| |||| ||| || ||| |||||    
T  19907893 agaaatatgttcaatggataataacaagtcat-gagtgagagaacatgctatgagaaaattaataaagcatgaatcctgcagcgacatgaagatgagata 19907795  T
Q  101 ata 103  Q
    |||    
T  19907794 ata 19907792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 16949548 - 16949491
Alignment:
Q  2 gaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa 59  Q
    |||||| ||||| |||||||||||||||||||  |||||||||||| |||| ||||||    
T  16949548 gaaataggttcattgggtaataacaagtcatgaagtgatagaacattctattataaaa 16949491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 17681577 - 17681705
Alignment:
Q  10 ttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaact 109  Q
    |||||||| |||||||| ||||||  ||||||||| |||||||||||| | |||||||||| ||  ||| |||  | |  | ||| |||||||| ||| |    
T  17681577 ttcaatggataataacatgtcatgaggtgatagaatatgctatgataagactagagaagcacga-ccctgcagtgaaagaatgatgagataatataaatt 17681675  T
Q  110 cttaatgagatctatactatatgtggagtg 139  Q
     ||||||||||||||||| ||||| |||||    
T  17681676 gttaatgagatctatactttatgttgagtg 17681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 8984594 - 8984625
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  8984594 agataatagaaactcttaatgagatctatact 8984625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 13696296 - 13696265
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  13696296 agataatagaaactcttaatgagatctatact 13696265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 21304142 - 21304173
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  21304142 agataatagaaactcttaatgagatctatact 21304173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 40000027 - 39999996
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  40000027 agataatagaaactcttaatgagatctatact 39999996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 54344161 - 54344130
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  54344161 agataatagaaactcttaatgagatctatact 54344130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 54992380 - 54992349
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  54992380 agataatagaaactcttaatgagatctatact 54992349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 24491355 - 24491317
Alignment:
Q  13 aatgggtaataacaagtcatggtgtgatagaacatgcta 51  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  24491355 aatgggtaataacaagtcatgaagtgatagaacatgcta 24491317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 24491266 - 24491226
Alignment:
Q  99 taatagaaactcttaatgagatctatactatatgtggagtg 139  Q
    ||||||||||||||||| ||||||||||| ||||| |||||    
T  24491266 taatagaaactcttaattagatctatactctatgttgagtg 24491226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 3674263 - 3674111
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  3674263 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 3674165  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  3674164 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 3674111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8884867 - 8884715
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||| ||||| |||||    
T  8884867 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacaaaaggatgagata 8884769  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  8884768 atagaaactcttaatgagatctatactctacgtggagtggagtacctagctaca 8884715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 23664593 - 23664745
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  23664593 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 23664691  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  23664692 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 23664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 18468836 - 18468684
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  18468836 agaaataggttcaatgggtaataacaagtcatga-gtgctagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 18468738  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18468737 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 18468684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12970281 - 12970406
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  |||||| |||||||||||| |||||||   |||||||| || | |||| ||| ||||||||||||    
T  12970281 agaaataggttcaatgggtaataacaagtcatga-gtgataaaacatgctatgagaaaattaagaaagcatgaatcatgcagcgacatgaggataagata 12970379  T
Q  101 atagaaactcttaatgagatctatact 127  Q
    |||||||||||||||||||||||||||    
T  12970380 atagaaactcttaatgagatctatact 12970406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 16452890 - 16452953
Alignment:
Q  99 taatagaaactcttaatgagatctatactatatgtggagt-gagtacctagctacaaaagtact 161  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||    
T  16452890 taatataaactcttaatgagatctatactctatgtggagtggagtacctagctacaagagtact 16452953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 3481256 - 3481287
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  3481256 agataatagaaactcttaatgagatctatact 3481287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 15767328 - 15767359
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  15767328 agataatagaaactcttaatgagatctatact 15767359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 17359104 - 17359073
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  17359104 agataatagaaactcttaatgagatctatact 17359073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 20094923 - 20094954
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  20094923 agataatagaaactcttaatgagatctatact 20094954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 7e-39; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 10136949 - 10136797
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  10136949 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 10136851  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  10136850 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 10136797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 25845380 - 25845228
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||| ||   ||||||||||||| |||  |||  ||||| |||||    
T  25845380 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgagaaaagtaagaaagcatgattcctgcagtgacagaaggatgagata 25845282  T
Q  101 atagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  25845281 atagaaactcttaatgagatctatactctatgtggagtggagtacctagctaca 25845228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 11807821 - 11807690
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    |||||||||||   |||||||||||||||||    |||||| ||||||||||||||||| ||   ||||||| ||||||| |  |||  ||||| |||||    
T  11807821 agaaatatgttatgtgggtaataacaagtcacaa-gtgataaaacatgctatgataaaaataagaaagcatggttcctactgtgacagaaggatgagata 11807723  T
Q  101 atagaaactcttaatgagatctatactatatgt 133  Q
    ||||||||| ||||||||||||||||| |||||    
T  11807722 atagaaacttttaatgagatctatactttatgt 11807690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 16037238 - 16037101
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| ||||||| |||||||||||||||| | |||| |||||||||||||| |||| ||   || ||||| |||| |||  | | |||| | ||||     
T  16037238 agaaataggttcaataggtaataacaagtcat-gagtgacagaacatgctatgagaaaagtaagaaatcatgaatcctgcagtgataggaggttgagatg 16037140  T
Q  101 atagaaactcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||| | |||||| |||||||||||    
T  16037139 atagaaactcttaatgaggtatatactctatgtggagtg 16037101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 27306885 - 27307004
Alignment:
Q  12 caatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaactct 111  Q
    |||||| |||||||||||||||   |||||||| |||||||||||||| ||||||||||||| |||| |||    |  | | | ||| ||||||||||||    
T  27306885 caatggataataacaagtcatgaaatgatagaatatgctatgataaaactagagaagcatgactcctgcagtggaagcatggtgagaaaatagaaactct 27306984  T
Q  112 taatgagatctatactatat 131  Q
    ||||||||| |||| |||||    
T  27306985 taatgagatttatagtatat 27307004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 5725904 - 5725837
Alignment:
Q  96 agataatagaaactcttaatgagatctatactatatgtggagtg-agtacctagctacaaaagtactt 162  Q
    ||||||||||||||||||||||||||||||||   | ||||||| ||||| ||||||||| |||||||    
T  5725904 agataatagaaactcttaatgagatctatactccttatggagtgaagtacatagctacaagagtactt 5725837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 27712229 - 27712198
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  27712229 agataatagaaactcttaatgagatctatact 27712198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 37408725 - 37408756
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  37408725 agataatagaaactcttaatgagatctatact 37408756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 1e-27; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12802905 - 12802752
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaa-gcatgattcctacagccacaagaggataagat 99  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||  |||| |  |||| ||| || |||| |||| ||| |||||| ||||    
T  12802905 agaaataggttcaatgggtaataacaagtcatga-gtgatagaacatgctatgccaaaaattaagaaagcacgaatcctgcagcgacatgaggatgagat 12802807  T
Q  100 aatagaaactcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    ||||||||||||| |||||||||||||| ||||| |||| |||||| ||||||||    
T  12802806 aatagaaactcttcatgagatctatactctatgttgagtggagtacatagctaca 12802752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 10391574 - 10391718
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaac 108  Q
    |||||||||||||||||||||||   | ||||||||||| ||||||||||| ||   |||||||||||||||||  |||  ||||| |||||||||||||    
T  10391574 gttcaatgggtaataacaagtcacaat-tgatagaacatactatgataaaagtaagaaagcatgattcctacagtgacagaaggatgagataatagaaac 10391672  T
Q  109 tcttaatgagatctatactatatgtggagt-gagtacctagctaca 153  Q
    | |||||||||| |||||| ||||| |||| |||||| ||||||||    
T  10391673 ttttaatgagatatatactctatgttgagtggagtacatagctaca 10391718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 14784139 - 14784017
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgata-gaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagat 99  Q
    |||||||  ||||||||||||||| ||||||||   ||||| |||||||||| ||||||| ||||||||||||||||||  ||  ||| || || |||||    
T  14784139 agaaatagattcaatgggtaataataagtcatgagatgataagaacatgctacgataaaactagagaagcatgattcctgaagtaacatgaagaaaagat 14784040  T
Q  100 aatagaaactcttaatgagatct 122  Q
    |||||||||||||||||||||||    
T  14784039 aatagaaactcttaatgagatct 14784017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 15234172 - 15234047
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgata-gaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagat 99  Q
    |||||||  ||||||||||||||| ||||||||   ||||| |||||||||| ||||||| |||||||||||||||| |  ||  ||| || || |||||    
T  15234172 agaaatagattcaatgggtaataataagtcatgagatgataagaacatgctacgataaaactagagaagcatgattcatgaagtaacatgaagaaaagat 15234073  T
Q  100 aatagaaactcttaatgagatctata 125  Q
    ||||| ||||||||||||||||||||    
T  15234072 aataggaactcttaatgagatctata 15234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1044945 - 1044808
Alignment:
Q  1 agaaatatgttcaatgggtaata--acaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataaga 98  Q
    ||||||| ||||||||| |||||  ||||||||||   ||||||||||||||||||||| | || | |||||||||||||| ||| |||  ||| | |||    
T  1044945 agaaataggttcaatggataatataacaagtcatgaa-tgatagaacatgctatgataacactatataagcatgattcctaaagcaacacaaggttgaga 1044847  T
Q  99 taatagaaactcttaatgagatctatactatatgtggag 137  Q
    | ||| || |||||||||||||||||||| ||| |||||    
T  1044846 tgataaaatctcttaatgagatctatactctatatggag 1044808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 2596357 - 2596255
Alignment:
Q  36 gtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagataatagaaactcttaatgagatctatactatatgtgg 135  Q
    |||||| |||||||||||| |||| ||   ||||||||||||| || | | |  ||||| | |||||||||||||||||||||||||||||| ||||| |    
T  2596357 gtgatacaacatgctatgacaaaagtaagaaagcatgattcctgca-ctatagaaggatgaaataatagaaactcttaatgagatctatactctatgttg 2596259  T
Q  136 agtg 139  Q
    ||||    
T  2596258 agtg 2596255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 15975405 - 15975340
Alignment:
Q  89 gaggataagataatagaaactcttaatgagatctatactatatgtggagtg-agtacctagctaca 153  Q
    |||||| |||||||||||||||||||| |||| |||||| ||| ||||||| ||||| ||||||||    
T  15975405 gaggatgagataatagaaactcttaataagatatatactctatttggagtgaagtacatagctaca 15975340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 15976301 - 15976232
Alignment:
Q  11 tcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctac 80  Q
    |||||| ||||||| || |||||  ||||||||||||  |||||||||| ||||||||||| ||||||||    
T  15976301 tcaatgagtaataaaaaatcatgaagtgatagaacataatatgataaaactagagaagcatcattcctac 15976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 17496639 - 17496608
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  17496639 agataatagaaactcttaatgagatctatact 17496608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 17556575 - 17556606
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  17556575 agataatagaaactcttaatgagatctatact 17556606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 33238961 - 33238930
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  33238961 agataatagaaactcttaatgagatctatact 33238930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 47994758 - 47994727
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  47994758 agataatagaaactcttaatgagatctatact 47994727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 7018152 - 7018192
Alignment:
Q  98 ataatagaaactcttaatgagatctatactatatgtggagt 138  Q
    ||||||| |||||||||||||||||||||| ||||| ||||    
T  7018152 ataatagcaactcttaatgagatctatactctatgttgagt 7018192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 7033510 - 7033550
Alignment:
Q  98 ataatagaaactcttaatgagatctatactatatgtggagt 138  Q
    ||||||| |||||||||||||||||||||| ||||| ||||    
T  7033510 ataatagcaactcttaatgagatctatactctatgttgagt 7033550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 60096 - 59966
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa-aattagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||   |||||||| |||| |||| | |  ||||| || |||||||||    
T  60096 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgataaggattaagaaagcatga-tcctgcagcgaaagaaggatgaggtaatagaaa 59998  T
Q  108 ctcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||||| ||||| |||||    
T  59997 ctcttaatgagatctatactctatgttgagtg 59966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 64298 - 64168
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa-aattagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||   |||||||| |||| |||| | |  ||||| || |||||||||    
T  64298 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgataaggattaagaaagcatga-tcctgcagcgaaagaaggatgaggtaatagaaa 64200  T
Q  108 ctcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||||| ||||| |||||    
T  64199 ctcttaatgagatctatactctatgttgagtg 64168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 48362 - 48492
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa-aattagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||   |||||||| |||| |||| | |  ||||| || |||||||||    
T  48362 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgataaggattaagaaagcatga-tcctgcagcgaaagaaggatgaggtaatagaaa 48460  T
Q  108 ctcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||||| ||||| |||||    
T  48461 ctcttaatgagatctatactctatgttgagtg 48492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 150271 - 150141
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa-aattagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||   |||||||| |||| |||| | |  ||||| || |||||||||    
T  150271 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgataaggattaagaaagcatga-tcctgcagcgaaagaaggatgaggtaatagaaa 150173  T
Q  108 ctcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||||| ||||| |||||    
T  150172 ctcttaatgagatctatactctatgttgagtg 150141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 21432 - 21295
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||| |||||| |||| ||   ||||||||||||| |||  | |  ||||  |||||    
T  21432 agaaataggttcaataggtaataacaagtcatga-gtgatagaacattctatgagaaaagtaagaaagcatgattcctgcagtgatagaaggaggagata 21334  T
Q  101 atagaaactcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  21333 atagaaactcttaatgagatttatactctatgtggagtg 21295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 51317 - 51447
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa-aattagagaagcatgattcctacagccacaagaggataagataatagaaa 107  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||  ||||   |||||||| |||| |||| | |  ||||| |  ||||| |||    
T  51317 gttcaatgggtaataacaagtcatgaagtgatagaacatgttatgataaggattaagaaagcatga-tcctgcagcgaaagaaggatgacgtaatataaa 51415  T
Q  108 ctcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||||| ||||| |||||    
T  51416 ctcttaatgagatctatactctatgttgagtg 51447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 212775 - 212823
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataa 57  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  212775 gttcaatgggtaataacaagtcatgaagtgatagaacatgctatgataa 212823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 6804 - 6693
Alignment:
Q  1 agaaatatgttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaattagagaagcatgattcctacagccacaagaggataagata 100  Q
    ||||||| |||||||||||||||| |||||| || |||||| || ||| ||||| ||||| |   |||||||| || | |||| ||| |||||| |||||    
T  6804 agaaataagttcaatgggtaataaaaagtcacggggtgataaaatatgttatgagaaaatgaagaaagcatgaatcatgcagcgacatgaggatgagata 6705  T
Q  101 atagaaactctt 112  Q
    ||||||||||||    
T  6704 atagaaactctt 6693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 2896 - 2764
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa--ttagag-aagcatgattcctacagccacaagaggataagataataga 105  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| ||||   || || |||||||| |||| |||  | |  ||||| || |||||||    
T  2896 gttcaatgggtaataacaagtcatgaagtgatagaacatgttatgagaaaaggatatagaaagcatga-tcctgcagtgagagaaggatgagttaataga 2798  T
Q  106 aactcttaatgagatctatactatatgtggagtg 139  Q
    |||||||||||||||||||||  ||||| |||||    
T  2797 aactcttaatgagatctatacactatgttgagtg 2764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 18050 - 18081
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  18050 agataatagaaactcttaatgagatctatact 18081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 27331 - 27300
Alignment:
Q  96 agataatagaaactcttaatgagatctatact 127  Q
    ||||||||||||||||||||||||||||||||    
T  27331 agataatagaaactcttaatgagatctatact 27300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 32831 - 32881
Alignment:
Q  9 gttcaatgggtaataacaagtcatggtgtgatagaacatgctatgataaaa 59  Q
    ||||||||| ||||||| |||||||  ||||||||||||||||||| ||||    
T  32831 gttcaatggataataactagtcatgaagtgatagaacatgctatgagaaaa 32881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University