View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3253_low_44 (Length: 204)
Name: NF3253_low_44
Description: NF3253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3253_low_44 |
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Alignment Details
Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 32325678 - 32325801
Alignment:
| Q |
20 |
ttaaaaggggtaaaaggagaaagnnnnnnntatctatgatgtctcttcaccctctcttaccacaatataatacctattgacagtagtatatctcaactcc |
119 |
Q |
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| T |
32325678 |
ttaaaaggggtaaaaggagaaagaaaaaaatatctatgatgtctcttcaccctctcttaccgcaatataataccgattgacagcagtatatctcgactcc |
32325777 |
T |
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| Q |
120 |
ttgagaggttgccgagacatcaaa |
143 |
Q |
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|||||||||||||||||||||||| |
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| T |
32325778 |
ttgagaggttgccgagacatcaaa |
32325801 |
T |
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