View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3256_high_7 (Length: 335)
Name: NF3256_high_7
Description: NF3256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3256_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 1263986 - 1263745
Alignment:
| Q |
1 |
tgaagaagatagagatgaaggcttacggcaagaatagaatgatacaagttgtgagctacatctctgaaatccattatcctcttctcttctacatacaagt |
100 |
Q |
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| T |
1263986 |
tgaagaagatagagatgaaggcttacggcaagaatagaatgatacaagttgtgagctacatctctgaaatccattatcctcttctcttctacatacaagt |
1263887 |
T |
|
| Q |
101 |
atgaaaacaaaatcaaaagataggaacaataaagtgaagatttatagaacaagaataatgaaaacaagcagcattaagtagaaagatcaaaagggaaatt |
200 |
Q |
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| T |
1263886 |
atgaaaacaaaatcaaaagataggaacaataaagtgaagatttatagaacaagaataatgaaaacaagcagcattaagtagaaagatcaaaagggaaatt |
1263787 |
T |
|
| Q |
201 |
gaatcaaacaggttatgtgcaacaacactaatagaattagat |
242 |
Q |
| |
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||||||||||||||||||||||||| |||||||||||||||| |
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| T |
1263786 |
gaatcaaacaggttatgtgcaacaatactaatagaattagat |
1263745 |
T |
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