View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3257_high_16 (Length: 250)
Name: NF3257_high_16
Description: NF3257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3257_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 14794968 - 14794731
Alignment:
| Q |
9 |
agcagagattactattatgatggctaagacaacaaatactgacccaaatgatccattggatgaatggtggtcaggttcaggtggtgcatattggtatgtg |
108 |
Q |
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| T |
14794968 |
agcagagattactattatgatggctaagacaacaaatactgacccaaatgatccattggatgaatggtggtcaggttcaggtggtgcatattggtatgtg |
14794869 |
T |
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| Q |
109 |
acagtggttggatagacttgaactggttgctgttgttgttgctgctgcattggttgttcttgtaaagacatcttaggtaataggaaaattttgtttgtga |
208 |
Q |
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| T |
14794868 |
acagtggttggatagacttgaactggttgctgctgttgttgttgctgcattggttgttcttgtaaagacatcttaggtaatagg-aaattttgtttgtga |
14794770 |
T |
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| Q |
209 |
ggggaataaggagaattatttggtatttgaggttgaagtt |
248 |
Q |
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| T |
14794769 |
-gggaataaggagaattgtttggtatttgaggttgaagtt |
14794731 |
T |
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