View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3259_high_1 (Length: 491)

Name: NF3259_high_1
Description: NF3259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3259_high_1
NF3259_high_1
[»] chr4 (96 HSPs)
chr4 (23-314)||(86775-87066)
chr4 (43-218)||(35787789-35787963)
chr4 (45-217)||(6616161-6616333)
chr4 (46-218)||(47668546-47668718)
chr4 (45-216)||(39592240-39592411)
chr4 (46-199)||(11114948-11115101)
chr4 (45-218)||(11094520-11094691)
chr4 (46-217)||(43894100-43894271)
chr4 (45-170)||(33377361-33377486)
chr4 (46-199)||(17319037-17319190)
chr4 (45-174)||(33376212-33376341)
chr4 (45-218)||(29663637-29663809)
chr4 (44-168)||(37560298-37560422)
chr4 (44-174)||(15446663-15446793)
chr4 (45-199)||(15786946-15787100)
chr4 (44-174)||(46796019-46796149)
chr4 (41-218)||(56000277-56000454)
chr4 (45-175)||(11113736-11113866)
chr4 (49-215)||(30682979-30683145)
chr4 (116-218)||(38418966-38419068)
chr4 (43-168)||(10403416-10403540)
chr4 (69-170)||(26788540-26788641)
chr4 (65-194)||(34438420-34438549)
chr4 (45-170)||(37558992-37559117)
chr4 (46-218)||(38370277-38370450)
chr4 (47-158)||(27408759-27408870)
chr4 (46-173)||(34439654-34439781)
chr4 (100-218)||(44302769-44302887)
chr4 (430-483)||(87181-87234)
chr4 (46-111)||(35789646-35789711)
chr4 (45-170)||(44128331-44128456)
chr4 (46-174)||(28103479-28103607)
chr4 (43-111)||(39590933-39591001)
chr4 (50-194)||(41401677-41401820)
chr4 (43-174)||(15787495-15787626)
chr4 (46-164)||(27410686-27410802)
chr4 (252-314)||(41401561-41401623)
chr4 (44-174)||(44304972-44305102)
chr4 (46-148)||(52658906-52659008)
chr4 (49-170)||(1273430-1273550)
chr4 (77-170)||(5688634-5688727)
chr4 (46-110)||(29686251-29686315)
chr4 (45-218)||(29687927-29688096)
chr4 (68-199)||(38555244-38555375)
chr4 (116-218)||(6140309-6140411)
chr4 (48-170)||(55953849-55953971)
chr4 (49-218)||(26393076-26393245)
chr4 (45-174)||(53400179-53400308)
chr4 (45-149)||(40143648-40143752)
chr4 (50-174)||(40146616-40146740)
chr4 (439-483)||(41401365-41401409)
chr4 (46-170)||(44126591-44126717)
chr4 (356-398)||(87107-87149)
chr4 (48-193)||(3533582-3533728)
chr4 (48-158)||(10403277-10403386)
chr4 (45-167)||(21104310-21104432)
chr4 (356-398)||(41401470-41401512)
chr4 (69-199)||(48207685-48207815)
chr4 (47-140)||(30682716-30682809)
chr4 (45-174)||(31711086-31711215)
chr4 (45-174)||(48206154-48206283)
chr4 (92-168)||(5687216-5687292)
chr4 (69-196)||(52660185-52660312)
chr4 (68-218)||(43419324-43419474)
chr4 (68-174)||(52981143-52981249)
chr4 (45-107)||(54374012-54374074)
chr4 (46-111)||(96737-96802)
chr4 (153-218)||(2293474-2293539)
chr4 (43-128)||(12396913-12396998)
chr4 (101-218)||(44159135-44159252)
chr4 (44-172)||(29833365-29833493)
chr4 (46-174)||(56001261-56001389)
chr4 (45-172)||(30672060-30672186)
chr4 (151-218)||(36604790-36604857)
chr4 (43-106)||(38371866-38371929)
chr4 (44-170)||(3217606-3217732)
chr4 (42-128)||(23752007-23752093)
chr4 (46-172)||(29834427-29834553)
chr4 (47-132)||(26376325-26376410)
chr4 (43-132)||(28189332-28189421)
chr4 (69-170)||(38417571-38417672)
chr4 (46-107)||(54372741-54372802)
chr4 (46-126)||(15445431-15445511)
chr4 (45-105)||(49923858-49923918)
chr4 (122-218)||(50530574-50530670)
chr4 (49-148)||(28370660-28370759)
chr4 (44-107)||(37642601-37642664)
chr4 (136-218)||(28102161-28102243)
chr4 (114-196)||(31712477-31712559)
chr4 (50-128)||(46794839-46794917)
chr4 (68-177)||(306594-306703)
chr4 (43-132)||(23202232-23202321)
chr4 (43-136)||(30441601-30441694)
chr4 (253-314)||(38370499-38370560)
chr4 (49-174)||(38553927-38554052)
chr4 (69-174)||(47667197-47667301)
[»] scaffold0045 (4 HSPs)
scaffold0045 (51-218)||(77128-77297)
scaffold0045 (252-314)||(77019-77081)
scaffold0045 (356-398)||(76935-76977)
scaffold0045 (437-483)||(76827-76871)
[»] chr8 (86 HSPs)
chr8 (46-218)||(39546626-39546798)
chr8 (48-218)||(117045-117215)
chr8 (45-218)||(36756058-36756231)
chr8 (68-218)||(13366999-13367149)
chr8 (47-213)||(37276197-37276363)
chr8 (45-218)||(36070172-36070345)
chr8 (45-199)||(16363780-16363934)
chr8 (69-218)||(7486095-7486244)
chr8 (45-218)||(44606133-44606306)
chr8 (47-174)||(36940026-36940153)
chr8 (46-218)||(35943902-35944075)
chr8 (46-218)||(10052099-10052271)
chr8 (49-218)||(19913490-19913659)
chr8 (45-170)||(43275744-43275869)
chr8 (46-170)||(41867913-41868037)
chr8 (45-168)||(31623900-31624023)
chr8 (46-164)||(38591010-38591128)
chr8 (136-218)||(44103245-44103327)
chr8 (45-174)||(29739636-29739765)
chr8 (43-174)||(24068322-24068453)
chr8 (45-168)||(31625383-31625505)
chr8 (45-171)||(36071374-36071500)
chr8 (120-218)||(36938750-36938848)
chr8 (41-218)||(24069395-24069572)
chr8 (46-218)||(21961818-21961990)
chr8 (45-218)||(21670058-21670231)
chr8 (69-174)||(37274905-37275010)
chr8 (49-218)||(37324637-37324806)
chr8 (45-170)||(41866888-41867013)
chr8 (45-176)||(37979-38110)
chr8 (68-218)||(12281729-12281878)
chr8 (43-128)||(10053783-10053868)
chr8 (68-216)||(2421244-2421392)
chr8 (43-155)||(38589813-38589924)
chr8 (116-216)||(41522639-41522739)
chr8 (51-214)||(39325787-39325950)
chr8 (45-218)||(13513414-13513587)
chr8 (45-218)||(13602947-13603120)
chr8 (43-188)||(37472395-37472540)
chr8 (114-218)||(13363527-13363631)
chr8 (46-134)||(37323343-37323431)
chr8 (46-177)||(29738286-29738417)
chr8 (43-158)||(43277930-43278045)
chr8 (45-132)||(43386737-43386824)
chr8 (152-218)||(21267233-21267299)
chr8 (45-177)||(39193-39325)
chr8 (46-158)||(35945446-35945558)
chr8 (43-170)||(1570203-1570330)
chr8 (49-168)||(4807364-4807483)
chr8 (68-199)||(8095363-8095494)
chr8 (45-216)||(39515193-39515364)
chr8 (68-170)||(3237435-3237536)
chr8 (46-199)||(20308600-20308753)
chr8 (46-199)||(21095233-21095386)
chr8 (69-170)||(27750618-27750719)
chr8 (45-174)||(45385787-45385916)
chr8 (45-145)||(36734566-36734666)
chr8 (45-172)||(19914901-19915028)
chr8 (65-196)||(39220693-39220824)
chr8 (49-127)||(21267162-21267240)
chr8 (60-174)||(39516490-39516604)
chr8 (50-147)||(14820192-14820289)
chr8 (46-127)||(37474076-37474157)
chr8 (44-132)||(15988997-15989085)
chr8 (46-128)||(6844612-6844694)
chr8 (48-110)||(7487444-7487506)
chr8 (120-218)||(8395064-8395162)
chr8 (113-199)||(31871457-31871543)
chr8 (45-107)||(42307490-42307552)
chr8 (45-110)||(3237697-3237762)
chr8 (46-111)||(39544925-39544990)
chr8 (44-132)||(40102214-40102302)
chr8 (45-96)||(8395018-8395069)
chr8 (44-107)||(11081092-11081155)
chr8 (44-127)||(16346092-16346175)
chr8 (45-132)||(39349474-39349561)
chr8 (46-132)||(3271155-3271241)
chr8 (46-132)||(21551917-21552003)
chr8 (46-132)||(21552963-21553049)
chr8 (46-124)||(38790296-38790374)
chr8 (43-132)||(3271890-3271979)
chr8 (45-166)||(8096546-8096667)
chr8 (43-132)||(15989136-15989225)
chr8 (43-132)||(30864490-30864579)
chr8 (43-132)||(40102380-40102469)
chr8 (253-293)||(36938895-36938935)
[»] chr2 (71 HSPs)
chr2 (44-216)||(29424563-29424735)
chr2 (46-218)||(23177668-23177841)
chr2 (46-218)||(23588925-23589098)
chr2 (46-218)||(12852881-12853053)
chr2 (43-218)||(7036958-7037133)
chr2 (47-174)||(23178875-23179002)
chr2 (47-174)||(23590132-23590259)
chr2 (68-218)||(14509226-14509376)
chr2 (48-218)||(28109818-28109988)
chr2 (43-217)||(37868990-37869164)
chr2 (48-196)||(35799509-35799657)
chr2 (116-218)||(7983644-7983746)
chr2 (45-218)||(4829459-4829632)
chr2 (45-174)||(6706920-6707049)
chr2 (68-217)||(10367256-10367405)
chr2 (151-218)||(14714592-14714659)
chr2 (45-217)||(12959655-12959827)
chr2 (46-170)||(42028955-42029079)
chr2 (46-170)||(2581798-2581922)
chr2 (152-218)||(26205114-26205180)
chr2 (73-174)||(21012073-21012174)
chr2 (46-139)||(37867751-37867844)
chr2 (45-170)||(42027187-42027312)
chr2 (45-132)||(7038367-7038454)
chr2 (46-141)||(12854130-12854225)
chr2 (44-174)||(12958410-12958539)
chr2 (48-130)||(41795989-41796071)
chr2 (116-197)||(7490165-7490246)
chr2 (49-174)||(10368378-10368503)
chr2 (45-198)||(32614379-32614532)
chr2 (45-174)||(42246585-42246714)
chr2 (46-170)||(34039258-34039382)
chr2 (162-218)||(45047453-45047509)
chr2 (151-218)||(4512206-4512273)
chr2 (68-174)||(1624969-1625074)
chr2 (116-218)||(3532259-3532361)
chr2 (47-172)||(2305536-2305661)
chr2 (69-174)||(11386642-11386747)
chr2 (45-218)||(25570819-25570992)
chr2 (101-218)||(41296403-41296520)
chr2 (114-174)||(40174757-40174817)
chr2 (43-110)||(11575512-11575579)
chr2 (151-214)||(21010451-21010514)
chr2 (46-132)||(42368343-42368428)
chr2 (69-174)||(6209058-6209162)
chr2 (49-170)||(15650439-15650560)
chr2 (101-218)||(15850608-15850725)
chr2 (154-218)||(3528214-3528278)
chr2 (45-129)||(14482129-14482213)
chr2 (46-177)||(2306651-2306781)
chr2 (45-172)||(3665218-3665345)
chr2 (44-134)||(2583579-2583669)
chr2 (46-127)||(42596555-42596636)
chr2 (44-132)||(27264608-27264696)
chr2 (46-199)||(42249750-42249909)
chr2 (45-128)||(3254850-3254933)
chr2 (47-126)||(3255919-3255997)
chr2 (48-111)||(4701543-4701606)
chr2 (116-191)||(8537077-8537152)
chr2 (45-172)||(41312494-41312621)
chr2 (68-126)||(4630125-4630183)
chr2 (45-111)||(33837811-33837877)
chr2 (43-128)||(3666307-3666391)
chr2 (43-128)||(5564051-5564136)
chr2 (46-111)||(14573864-14573929)
chr2 (43-132)||(17858619-17858708)
chr2 (101-174)||(35801038-35801111)
chr2 (45-174)||(41295099-41295228)
chr2 (44-132)||(15816701-15816789)
chr2 (44-132)||(27262706-27262794)
chr2 (44-132)||(43015532-43015620)
[»] scaffold1974 (1 HSPs)
scaffold1974 (45-218)||(577-750)
[»] scaffold1878 (1 HSPs)
scaffold1878 (45-218)||(524-697)
[»] scaffold0290 (2 HSPs)
scaffold0290 (45-218)||(9427-9600)
scaffold0290 (43-174)||(8371-8502)
[»] chr1 (84 HSPs)
chr1 (46-218)||(21276989-21277161)
chr1 (46-218)||(52742925-52743097)
chr1 (49-218)||(9633773-9633942)
chr1 (48-218)||(26056096-26056266)
chr1 (46-218)||(44977216-44977388)
chr1 (46-218)||(49141445-49141617)
chr1 (45-174)||(47560133-47560262)
chr1 (43-174)||(13641249-13641380)
chr1 (44-170)||(25787161-25787287)
chr1 (44-189)||(14071181-14071326)
chr1 (45-170)||(25785962-25786087)
chr1 (46-170)||(47411445-47411569)
chr1 (43-218)||(23082075-23082250)
chr1 (68-194)||(36509828-36509954)
chr1 (45-170)||(16218475-16218600)
chr1 (45-218)||(30551538-30551711)
chr1 (45-169)||(3979311-3979435)
chr1 (43-174)||(49139793-49139924)
chr1 (51-189)||(13930653-13930791)
chr1 (45-174)||(26054892-26055020)
chr1 (45-170)||(47136684-47136809)
chr1 (101-218)||(51726793-51726910)
chr1 (118-218)||(14764296-14764396)
chr1 (43-218)||(22766769-22766945)
chr1 (43-218)||(50678358-50678530)
chr1 (63-218)||(14169631-14169786)
chr1 (53-168)||(48467263-48467377)
chr1 (44-218)||(51218915-51219089)
chr1 (45-194)||(13642530-13642679)
chr1 (46-210)||(37624527-37624691)
chr1 (45-168)||(3978038-3978161)
chr1 (48-147)||(13929292-13929391)
chr1 (47-170)||(47410980-47411103)
chr1 (114-216)||(27689346-27689448)
chr1 (101-194)||(19466178-19466271)
chr1 (49-174)||(50679814-50679939)
chr1 (45-173)||(36511325-36511453)
chr1 (116-218)||(8092663-8092765)
chr1 (44-177)||(22167772-22167905)
chr1 (43-111)||(44979427-44979495)
chr1 (44-172)||(48935105-48935233)
chr1 (43-107)||(49618423-49618487)
chr1 (45-172)||(14390252-14390379)
chr1 (46-177)||(35683050-35683181)
chr1 (84-174)||(9592271-9592361)
chr1 (70-172)||(19464619-19464721)
chr1 (44-132)||(2971691-2971780)
chr1 (46-111)||(33793774-33793839)
chr1 (43-168)||(52181304-52181429)
chr1 (45-172)||(2237973-2238100)
chr1 (46-129)||(34653430-34653513)
chr1 (43-174)||(52741480-52741611)
chr1 (45-107)||(49619879-49619941)
chr1 (44-177)||(2236806-2236939)
chr1 (46-107)||(38451547-38451608)
chr1 (46-170)||(16217435-16217559)
chr1 (68-199)||(2972976-2973107)
chr1 (69-176)||(14765085-14765192)
chr1 (45-128)||(48974445-48974528)
chr1 (253-300)||(49141346-49141393)
chr1 (41-111)||(1061508-1061578)
chr1 (46-128)||(48934236-48934318)
chr1 (45-134)||(20953282-20953371)
chr1 (43-132)||(25866707-25866796)
chr1 (46-107)||(38451768-38451829)
chr1 (116-177)||(40811260-40811321)
chr1 (46-107)||(52439345-52439406)
chr1 (116-196)||(40109426-40109506)
chr1 (45-128)||(14312769-14312852)
chr1 (71-174)||(42248298-42248401)
chr1 (45-132)||(51760033-51760120)
chr1 (46-128)||(1061323-1061405)
chr1 (42-148)||(25035349-25035455)
chr1 (42-148)||(25040562-25040668)
chr1 (42-148)||(38458077-38458183)
chr1 (46-132)||(52370978-52371064)
chr1 (47-132)||(4387989-4388074)
chr1 (116-197)||(24517584-24517665)
chr1 (43-172)||(35684198-35684326)
chr1 (49-110)||(40135394-40135455)
chr1 (43-132)||(47512119-47512208)
chr1 (45-77)||(7485452-7485484)
chr1 (45-145)||(29001144-29001244)
chr1 (43-199)||(45570311-45570466)
[»] chr6 (32 HSPs)
chr6 (47-218)||(18139436-18139607)
chr6 (47-218)||(33801966-33802137)
chr6 (44-199)||(31738356-31738511)
chr6 (43-174)||(22299896-22300027)
chr6 (46-170)||(8412313-8412437)
chr6 (49-174)||(27438788-27438913)
chr6 (47-196)||(27440146-27440295)
chr6 (45-174)||(33807683-33807812)
chr6 (45-199)||(9927600-9927753)
chr6 (46-218)||(293589-293762)
chr6 (48-168)||(8411083-8411203)
chr6 (44-158)||(5311272-5311386)
chr6 (45-194)||(22298598-22298747)
chr6 (45-174)||(31740265-31740394)
chr6 (118-218)||(14328723-14328823)
chr6 (118-218)||(14421733-14421833)
chr6 (46-148)||(34084153-34084253)
chr6 (160-217)||(13507121-13507178)
chr6 (45-177)||(8447215-8447347)
chr6 (45-177)||(8456019-8456151)
chr6 (43-132)||(21749837-21749926)
chr6 (44-172)||(2138632-2138760)
chr6 (44-132)||(12202327-12202415)
chr6 (46-128)||(19367712-19367794)
chr6 (46-172)||(19368513-19368639)
chr6 (68-110)||(34083075-34083117)
chr6 (145-218)||(2130877-2130950)
chr6 (46-126)||(683581-683661)
chr6 (46-126)||(13173032-13173112)
chr6 (45-81)||(15435686-15435722)
chr6 (48-128)||(28225421-28225501)
chr6 (171-199)||(30231601-30231629)
[»] chr3 (92 HSPs)
chr3 (43-218)||(19621997-19622172)
chr3 (46-218)||(17350051-17350223)
chr3 (49-218)||(39133015-39133184)
chr3 (45-218)||(8371214-8371387)
chr3 (41-218)||(25583104-25583280)
chr3 (47-218)||(53808314-53808485)
chr3 (69-218)||(11219448-11219597)
chr3 (43-218)||(47765431-47765605)
chr3 (45-196)||(51400209-51400360)
chr3 (43-170)||(51825618-51825745)
chr3 (46-218)||(26798855-26799027)
chr3 (46-168)||(47808105-47808227)
chr3 (41-168)||(41386120-41386247)
chr3 (43-170)||(41387430-41387557)
chr3 (46-169)||(54653964-54654087)
chr3 (45-218)||(32979082-32979255)
chr3 (46-174)||(7820385-7820513)
chr3 (46-174)||(32980445-32980573)
chr3 (46-170)||(42632701-42632825)
chr3 (43-170)||(42633883-42634010)
chr3 (46-168)||(10987652-10987774)
chr3 (45-174)||(47855331-47855460)
chr3 (46-147)||(51401371-51401472)
chr3 (43-174)||(11220651-11220782)
chr3 (44-174)||(8372609-8372739)
chr3 (45-218)||(34902943-34903115)
chr3 (45-174)||(53809486-53809615)
chr3 (43-174)||(25585826-25585957)
chr3 (48-218)||(12062333-12062503)
chr3 (116-218)||(23559884-23559986)
chr3 (44-158)||(54752609-54752723)
chr3 (46-167)||(49122002-49122123)
chr3 (46-174)||(17345306-17345433)
chr3 (46-174)||(29536709-29536837)
chr3 (91-170)||(2124069-2124148)
chr3 (47-170)||(36626727-36626850)
chr3 (43-170)||(47806810-47806936)
chr3 (53-167)||(43101896-43102010)
chr3 (70-167)||(19253002-19253099)
chr3 (43-172)||(32973131-32973260)
chr3 (45-174)||(49334330-49334459)
chr3 (41-218)||(7483474-7483653)
chr3 (46-177)||(32974213-32974344)
chr3 (44-170)||(43103293-43103419)
chr3 (45-107)||(48338177-48338239)
chr3 (43-177)||(53047889-53048023)
chr3 (68-217)||(35174332-35174481)
chr3 (45-174)||(48252927-48253056)
chr3 (43-172)||(53049032-53049161)
chr3 (46-177)||(48035314-48035445)
chr3 (252-314)||(19622219-19622281)
chr3 (45-111)||(19622975-19623041)
chr3 (116-218)||(21127990-21128092)
chr3 (68-174)||(43345336-43345442)
chr3 (74-155)||(10986675-10986756)
chr3 (47-156)||(13077962-13078071)
chr3 (69-174)||(47766944-47767048)
chr3 (43-132)||(51213612-51213701)
chr3 (43-127)||(19579212-19579296)
chr3 (118-174)||(29537135-29537191)
chr3 (44-128)||(39288478-39288562)
chr3 (356-398)||(19622329-19622371)
chr3 (165-207)||(24753462-24753504)
chr3 (151-214)||(31638218-31638283)
chr3 (48-94)||(51824123-51824169)
chr3 (43-132)||(12105351-12105440)
chr3 (43-132)||(23886108-23886197)
chr3 (46-111)||(24753547-24753611)
chr3 (43-132)||(46987317-46987406)
chr3 (46-107)||(48336342-48336403)
chr3 (68-172)||(39287487-39287591)
chr3 (45-177)||(52292588-52292720)
chr3 (43-127)||(53342708-53342792)
chr3 (45-132)||(30432647-30432734)
chr3 (44-111)||(33563942-33564009)
chr3 (41-128)||(48825802-48825889)
chr3 (45-132)||(51213445-51213532)
chr3 (49-172)||(52293518-52293641)
chr3 (45-128)||(55443589-55443672)
chr3 (46-132)||(12106542-12106628)
chr3 (46-128)||(19579333-19579415)
chr3 (46-132)||(23886861-23886947)
chr3 (45-79)||(26797313-26797347)
chr3 (44-122)||(40502260-40502338)
chr3 (45-126)||(2225065-2225146)
chr3 (43-132)||(13041939-13042028)
chr3 (43-132)||(13050016-13050105)
chr3 (43-132)||(19283726-19283815)
chr3 (253-314)||(25583327-25583388)
chr3 (43-132)||(30838505-30838594)
chr3 (129-174)||(47854565-47854610)
chr3 (45-128)||(383010-383094)
[»] chr7 (91 HSPs)
chr7 (50-197)||(4857200-4857347)
chr7 (44-217)||(38406011-38406184)
chr7 (56-218)||(14109020-14109180)
chr7 (56-218)||(14418977-14419137)
chr7 (46-168)||(40926518-40926640)
chr7 (44-170)||(22061792-22061918)
chr7 (45-211)||(40930412-40930578)
chr7 (46-218)||(46458662-46458834)
chr7 (43-174)||(13446651-13446782)
chr7 (44-199)||(33459511-33459666)
chr7 (46-168)||(22744741-22744863)
chr7 (48-194)||(43930316-43930462)
chr7 (48-170)||(19279609-19279731)
chr7 (45-149)||(1970807-1970911)
chr7 (46-166)||(25153653-25153773)
chr7 (49-218)||(25154885-25155054)
chr7 (45-170)||(43006379-43006504)
chr7 (43-168)||(46674933-46675058)
chr7 (47-154)||(4858357-4858464)
chr7 (46-169)||(19278348-19278471)
chr7 (43-170)||(22746317-22746444)
chr7 (49-194)||(41516317-41516462)
chr7 (116-218)||(4167516-4167618)
chr7 (68-174)||(14206690-14206796)
chr7 (68-174)||(14215380-14215486)
chr7 (46-155)||(36702772-36702881)
chr7 (46-174)||(14107827-14107955)
chr7 (46-174)||(14417784-14417912)
chr7 (45-168)||(36702949-36703073)
chr7 (152-218)||(24495000-24495066)
chr7 (101-199)||(27899182-27899280)
chr7 (44-138)||(28325066-28325159)
chr7 (116-190)||(35315199-35315273)
chr7 (45-218)||(18801209-18801382)
chr7 (69-174)||(24873590-24873695)
chr7 (45-174)||(43931859-43931988)
chr7 (45-174)||(43936133-43936262)
chr7 (46-170)||(22060458-22060582)
chr7 (44-199)||(131967-132122)
chr7 (43-170)||(7148055-7148181)
chr7 (48-139)||(18802417-18802508)
chr7 (43-158)||(46457062-46457177)
chr7 (68-218)||(19848783-19848933)
chr7 (68-174)||(45721759-45721865)
chr7 (43-172)||(33458302-33458430)
chr7 (101-218)||(35484259-35484376)
chr7 (43-168)||(41126231-41126356)
chr7 (45-174)||(44114649-44114777)
chr7 (83-218)||(26406157-26406292)
chr7 (43-170)||(48672772-48672899)
chr7 (68-154)||(43935202-43935288)
chr7 (45-170)||(7146775-7146898)
chr7 (45-170)||(43007646-43007771)
chr7 (73-170)||(46673512-46673608)
chr7 (44-132)||(41514991-41515077)
chr7 (43-174)||(7347213-7347344)
chr7 (45-132)||(17288255-17288341)
chr7 (45-172)||(30222640-30222767)
chr7 (46-196)||(24871986-24872135)
chr7 (43-149)||(25532138-25532243)
chr7 (43-177)||(34558291-34558425)
chr7 (46-128)||(38002553-38002635)
chr7 (68-174)||(47163170-47163276)
chr7 (43-172)||(30223971-30224100)
chr7 (49-166)||(48671076-48671192)
chr7 (44-132)||(10338348-10338436)
chr7 (42-158)||(38408283-38408399)
chr7 (45-96)||(4973507-4973558)
chr7 (101-196)||(13286965-13287060)
chr7 (77-168)||(35127836-35127927)
chr7 (45-127)||(41127211-41127293)
chr7 (46-128)||(41616619-41616701)
chr7 (69-199)||(45719633-45719763)
chr7 (60-145)||(17287083-17287168)
chr7 (46-107)||(29658673-29658734)
chr7 (47-172)||(41618494-41618619)
chr7 (46-174)||(28326383-28326510)
chr7 (48-96)||(35128233-35128281)
chr7 (44-172)||(36673831-36673959)
chr7 (70-174)||(48754015-48754119)
chr7 (45-128)||(1885280-1885363)
chr7 (44-127)||(33341291-33341374)
chr7 (46-177)||(34557392-34557523)
chr7 (45-132)||(40501490-40501577)
chr7 (45-132)||(47809484-47809571)
chr7 (46-132)||(43704603-43704689)
chr7 (356-397)||(25533108-25533149)
chr7 (253-290)||(26406339-26406376)
chr7 (43-132)||(32610676-32610765)
chr7 (43-128)||(35480200-35480284)
chr7 (43-107)||(29656981-29657045)
[»] scaffold0025 (1 HSPs)
scaffold0025 (48-218)||(56649-56819)
[»] chr5 (66 HSPs)
chr5 (43-218)||(19525237-19525412)
chr5 (45-218)||(5382936-5383109)
chr5 (46-159)||(18677971-18678084)
chr5 (45-218)||(21387631-21387804)
chr5 (44-168)||(1663180-1663304)
chr5 (46-158)||(19827149-19827261)
chr5 (43-174)||(12936095-12936226)
chr5 (44-174)||(5384339-5384469)
chr5 (65-199)||(40058032-40058166)
chr5 (84-194)||(42510147-42510257)
chr5 (48-157)||(27894033-27894142)
chr5 (43-170)||(10085842-10085969)
chr5 (46-207)||(7345350-7345511)
chr5 (49-218)||(18693696-18693865)
chr5 (114-218)||(2167464-2167567)
chr5 (49-199)||(223223-223374)
chr5 (43-174)||(12950253-12950384)
chr5 (48-174)||(1273086-1273212)
chr5 (44-168)||(26403300-26403424)
chr5 (43-167)||(42979440-42979564)
chr5 (48-218)||(12933748-12933918)
chr5 (68-174)||(15613522-15613628)
chr5 (49-174)||(22812380-22812505)
chr5 (69-214)||(38471307-38471452)
chr5 (44-172)||(15614955-15615083)
chr5 (46-174)||(19523978-19524105)
chr5 (43-110)||(41905167-41905234)
chr5 (45-111)||(6629725-6629791)
chr5 (116-218)||(7426706-7426808)
chr5 (41-177)||(4567964-4568100)
chr5 (46-218)||(12862867-12863039)
chr5 (43-174)||(224583-224714)
chr5 (120-199)||(22819485-22819564)
chr5 (68-174)||(15857611-15857717)
chr5 (44-109)||(328212-328277)
chr5 (48-194)||(5977046-5977194)
chr5 (47-168)||(8762399-8762520)
chr5 (43-172)||(15510258-15510387)
chr5 (46-218)||(12830887-12831059)
chr5 (45-177)||(19825868-19826000)
chr5 (45-109)||(24805285-24805349)
chr5 (118-197)||(32734198-32734277)
chr5 (47-174)||(40059321-40059448)
chr5 (48-218)||(12947909-12948079)
chr5 (49-174)||(18695640-18695765)
chr5 (46-174)||(42980702-42980830)
chr5 (43-174)||(5975748-5975879)
chr5 (45-132)||(6914847-6914934)
chr5 (49-168)||(15509193-15509312)
chr5 (45-107)||(30916178-30916240)
chr5 (77-174)||(38473548-38473645)
chr5 (44-124)||(1273383-1273463)
chr5 (45-128)||(5061022-5061105)
chr5 (49-132)||(12952769-12952852)
chr5 (44-107)||(14356426-14356488)
chr5 (45-132)||(32780117-32780204)
chr5 (62-173)||(42511660-42511771)
chr5 (46-128)||(19050744-19050826)
chr5 (46-172)||(20988685-20988811)
chr5 (116-158)||(22819558-22819600)
chr5 (43-132)||(12937917-12938006)
chr5 (68-197)||(26912308-26912437)
chr5 (48-132)||(2472465-2472549)
chr5 (69-177)||(22650618-22650726)
chr5 (118-170)||(32735476-32735528)
chr5 (43-107)||(33362627-33362691)
[»] scaffold0051 (2 HSPs)
scaffold0051 (48-218)||(39850-40020)
scaffold0051 (48-174)||(22125-22250)
[»] scaffold0084 (2 HSPs)
scaffold0084 (51-218)||(13153-13320)
scaffold0084 (40-174)||(11695-11829)
[»] scaffold0003 (2 HSPs)
scaffold0003 (47-196)||(47066-47215)
scaffold0003 (49-174)||(48449-48574)
[»] scaffold0178 (2 HSPs)
scaffold0178 (43-174)||(2258-2389)
scaffold0178 (46-199)||(1207-1359)
[»] scaffold0098 (1 HSPs)
scaffold0098 (120-218)||(40977-41075)
[»] scaffold0015 (1 HSPs)
scaffold0015 (46-218)||(207747-207919)
[»] scaffold2127 (1 HSPs)
scaffold2127 (45-170)||(512-637)
[»] scaffold0122 (1 HSPs)
scaffold0122 (44-218)||(15943-16112)
[»] scaffold0024 (1 HSPs)
scaffold0024 (45-174)||(72979-73108)
[»] scaffold0046 (2 HSPs)
scaffold0046 (44-174)||(24808-24938)
scaffold0046 (44-132)||(23399-23487)
[»] scaffold0007 (2 HSPs)
scaffold0007 (48-168)||(145868-145988)
scaffold0007 (43-132)||(28124-28213)
[»] scaffold0013 (2 HSPs)
scaffold0013 (45-158)||(96154-96267)
scaffold0013 (45-127)||(96855-96937)
[»] scaffold0369 (1 HSPs)
scaffold0369 (48-171)||(12907-13030)
[»] scaffold0177 (1 HSPs)
scaffold0177 (44-172)||(1748-1876)
[»] scaffold0155 (1 HSPs)
scaffold0155 (44-126)||(5162-5244)
[»] scaffold0034 (1 HSPs)
scaffold0034 (44-94)||(98042-98092)
[»] scaffold0839 (1 HSPs)
scaffold0839 (43-132)||(17-106)
[»] scaffold0316 (1 HSPs)
scaffold0316 (43-83)||(11855-11895)
[»] scaffold0038 (1 HSPs)
scaffold0038 (48-128)||(25919-25999)


Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 23 - 314
Target Start/End: Original strand, 86775 - 87066
Alignment:
Q  23 gaagcaaactccaaattgagaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaattt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  86775 gaagcaaactccaaattgagaaaggcttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaattt 86874  T
Q  123 ggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccttta 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  86875 ggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccttta 86974  T
Q  223 aacatttttaactatttgactannnnnnncaaaaagagaaccgttggatcatataagtatgttgtatcttacgataaactatcaacgcctaa 314  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  86975 aacatttttaactatttgactatttttttcaaaaagagaaccgttggatcatttaagtctgttgtatcttacgataaactatcaacgcctaa 87066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 35787789 - 35787963
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||| ||||| |||| ||||| |||||||||||| |||||||||||||| | |||||||||||   ||||||||||||||||||||| ||||| |    
T  35787789 aaaggctta-tacattatttggtctcataacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtc 35787887  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  35787888 gtttaccgttttggtcctctccgttagtttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtccacc 35787963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 6616333 - 6616161
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||  |||||||||||||| ||||||||||||||  | |||| |||||||| || |||||||| |||    
T  6616333 aggcttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgt 6616234  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    ||| |||||||||| ||||| |||||||||||||||||||||| ||||||||| ||| |||||| | ||||||    
T  6616233 ttattgttttggtcctctcctttagtttttaacatcaaatgtcaaaggtgaacaatgattaaagatagtccac 6616161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 47668718 - 47668546
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| |||  ||||||||||||  |||||||||||||| ||||||||||||||  | |||| |||||||| || ||  |||||||||    
T  47668718 ggcttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtt 47668619  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    || |||||||||| |||| |||||||||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  47668618 tattgttttggtcctctctgttagtttttaacatcaaatatctaaggtaaaccatggttaaagatggtccacc 47668546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 39592411 - 39592240
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||||||| ||| |||||||||||||  ||||||||||| || ||||||||||||||  | |||| |||||||  ||  | ||||| |||    
T  39592411 aggcttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgt 39592312  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcca 216  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  39592311 ttactgttttggttctctccgttaatttttaacatcaaatgtctaaggtgagccatgtttaaaggtggtcca 39592240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 11115101 - 11114948
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| || ||||||||||||||||| | ||||| ||||    
T  11115101 ggcttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgtt 11115002  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||  |||||| | |||||||||||||||||| | ||||||||||| |||||||    
T  11115001 taccattttggacctctccgttagtttttaaccttaaatgtctaagctgaacca 11114948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 11094520 - 11094691
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||| ||| | |||  |||| |||||||| ||||| ||||||||  |||||||||||||  | | |||||||||| |||||| |||||||||    
T  11094520 aggcttaatacaccatctggtcctttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgt 11094619  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||||| ||||    
T  11094620 ttactgttttggtcctcttcgttagtttttaacatcaaatgtctaaggt--accatgtttaaatgtggttcacc 11094691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 43894100 - 43894271
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||| |||||| |||||||||||||   | ||||||||||| ||||| |||| | | |||    
T  43894100 ggcttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctgtt 43894199  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
      || |||||||| | |||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  43894200 acctcttttggtcatatccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccac 43894271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 33377486 - 33377361
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| ||||||||||||||  |||||| |||||| ||||||||||||||  | ||||||||||||||||||| |||||||||    
T  33377486 aggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgt 33377387  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||||| |||||||| |||||||||||    
T  33377386 ttactattttggtcctctccgttagt 33377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 17319037 - 17319190
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||    ||||||||||||||||| | || ||| |||| |  | |||||||||||  |||||||||||| |||||||| ||||| ||||    
T  17319037 ggcttaatacatcacccggtctcttaacttattttaatttctcagtttgatctcttaactataaagtgtttcaatttggttccataaatcttctggcgtt 17319136  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  17319137 tactattttggtcttcaccgttagtttttaaccttaaatgtctaaggtgaacca 17319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 33376212 - 33376341
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| ||| || |||||| |||||||  | ||||||||||||||||||| ||||| |||    
T  33376212 aggcttaatacatcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgt 33376311  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| |||| ||| ||||||||| |||||    
T  33376312 ttactattttagtcctctccgttaattttt 33376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 29663637 - 29663809
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| |||| || ||||| |||||||| ||||||| |||| | |||||||||||||   | ||||||||||||||||| | |||||||||    
T  29663637 aggcttaatacatcctttaatcccttaatttatttttggttttcattttgat-ccctaactataaattgtctcaatttggtcccataactcttctgccgt 29663735  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  ||||| |||| ||||||   ||||||||| |||||||||||||||||||   ||| ||||||||||||    
T  29663736 ttaccattttgatcttttccgtttaattttaacattaaatgtctaaggtgaaccaacattataggtggtccacc 29663809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 37560422 - 37560298
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||||||||| ||  | ||    
T  37560422 aaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacg 37560323  T
Q  144 tttactgttttggtcttctccgtta 168  Q
    |||||| | |||||| |||||||||    
T  37560322 tttactatcttggtcctctccgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 15446793 - 15446663
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  ||| ||| |||||||||||||| | ||||| ||||||   |||| |||||||  ||||||||||||||||||||| |||| |||    
T  15446793 aaggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccg 15446694  T
Q  144 tttactgttttggtcttctccgttagttttt 174  Q
    |||||| |||||||| |||||||||||||||    
T  15446693 tttactattttggtcctctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 15786946 - 15787100
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| |||  ||||||||||||| ||||||| |||| | |||||||||||||   | ||||||||||||||||| | |||||||||    
T  15786946 aggcttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctgccgt 15787045  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||   || || || ||||||||| |||||||| | |||||||||||||| ||||    
T  15787046 ttatcattatgatcctctccgttaatttttaaccttaaatgtctaaggtgcacca 15787100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 46796149 - 46796019
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||| ||| ||| |||||||||||||| ||||| | |||||| ||||||||||||||  | ||||||||||||||||| | |||  |||    
T  46796149 aaggcttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccg 46796050  T
Q  144 tttactgttttggtcttctccgttagttttt 174  Q
    |||||| || ||||| |||||||||||||||    
T  46796049 tttactattgtggtcctctccgttagttttt 46796019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 218
Target Start/End: Original strand, 56000277 - 56000454
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctg 140  Q
    |||||||||||||||||  |||  || ||||||||||||||  |||||| |||| | ||||||||||||||  | ||||||| |||| |||| | |||||    
T  56000277 agaaaggcttaatacatgctttgatcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctg 56000376  T
Q  141 ccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||  |||||||||| ||| | |||||||||||  |||||||||||||| ||||   ||| ||||||||||||    
T  56000377 ccgtttaccattttggtcttttccatcagtttttaacactaaatgtctaaggtggaccaacattataggtggtccacc 56000454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 11113736 - 11113866
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||  ||||||| ||| || || |||||||||||  | ||||||||||| ||||| | |||||||||    
T  11113736 aggcttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgt 11113835  T
Q  145 ttactgttttggtcttctccgttagttttta 175  Q
    ||||  |||||||| | ||||||||||||||    
T  11113836 ttaccattttggtcatttccgttagttttta 11113866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 30683145 - 30682979
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||  ||| ||| ||||| ||||||||  |||||| |||||| || |||||||||||  | ||||||||||||||||||| ||| |||||| |     
T  30683145 ttaatacatgctttggtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaat 30683046  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    | ||||||||||||||||||||||||||||  |||| | |||| ||||| |  |||| |||||||||    
T  30683045 tcttttggtcttctccgttagtttttaacaataaatatttaagatgaactaactttataggtggtcc 30682979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 38419068 - 38418966
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    ||||||||||| ||||| | ||||||||||||||||||| ||| |||||||||||||||||||| ||| || |||| |||||||| |||| |||||||||    
T  38419068 tcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgttagtttttaacattaaacgtttaagatgaaccatatttataggtggtcc 38418969  T
Q  216 acc 218  Q
    |||    
T  38418968 acc 38418966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 10403540 - 10403416
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||  | ||||||||||| ||||||| ||| | |    
T  10403540 aaaggcttaatacatcatttagtctcttaacttatttttggttttcactttgatt-tctaactataaagtgtatcaatttggtctcataaatcttcagtc 10403442  T
Q  143 gtttactgttttggtcttctccgtta 168  Q
    ||||| | ||| |||| |||| ||||    
T  10403441 gtttattatttcggtcctctcggtta 10403416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 26788540 - 26788641
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    |||||||||||||||||||||||||||| |  ||| ||||||  || ||||||| ||||||||||| |||||||||||||| |||||||| |||||||||    
T  26788540 ttaacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T
Q  169 gt 170  Q
    ||    
T  26788640 gt 26788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 65 - 194
Target Start/End: Original strand, 34438420 - 34438549
Alignment:
Q  65 tctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctcc 164  Q
    ||||||||||||||||   || ||| ||| || || |||||||||||  | ||||||||||||||||||| |||||||||||||| |||||||  ||||     
T  34438420 tctcttaacttattttattttctcagtttagtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctct 34438519  T
Q  165 gttagtttttaacatcaaatgtctaaggtg 194  Q
    ||||||||||||| ||||||||||| ||||    
T  34438520 gttagtttttaacctcaaatgtctatggtg 34438549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 37558992 - 37559117
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||  |||||||||||||| ||||||| |||||| |||||||||||||   | ||||||||||||||||||  ||   ||||    
T  37558992 aggcttaatacatcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgt 37559091  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||||| |||||||| |||||||||||    
T  37559092 ttactattttggtcatctccgttagt 37559117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 38370277 - 38370450
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||| ||| ||| ||||||||||||||  |||||| ||||||   ||||| ||||||  | ||||||||||| ||||| | ||||| ||||    
T  38370277 ggcttaatacatcgtttggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtt 38370376  T
Q  146 tactgttttggtcttctccgttagtttttaa-catcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||  |||||||| ||||||||||||||||| | | ||||| |||||||||||||  |||  ||||||||||||    
T  38370377 taccattttggtcatctccgttagtttttaaccttaaaatgactaaggtgaaccaactttgtaggtggtccacc 38370450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 27408759 - 27408870
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| ||||||||||||| |||||||| ||||||   ||||||||||||  | ||||||||||||||||||| |||| ||||||    
T  27408759 gcttaatacatcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgttt 27408858  T
Q  147 actgttttggtc 158  Q
    ||  ||||||||    
T  27408859 accattttggtc 27408870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 34439781 - 34439654
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||  | |||| |||||||||||||   || ||| | |||| || ||||||||||   ||||||||||||||||||||| ||||||||||    
T  34439781 ggcttaatacatccctcagtcccttaacttattttattttctcagtgtggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccgtt 34439682  T
Q  146 tactgttttggtcttctccgttagtttt 173  Q
    |||| |||||||| ||||||||||||||    
T  34439681 tactattttggtcatctccgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 44302769 - 44302887
Alignment:
Q  100 ctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||||||||||  | |||||||| |||||||||| ||||||| ||  || |||||||| |||||||||||||||||||| ||| | ||||||||||| |    
T  44302769 ctaactataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcctctccgttagtttttaacattaaaagactaaggtgaacta 44302868  T
Q  200 tgtttaaaggtggtccacc 218  Q
    | |||||||||||| ||||    
T  44302869 tatttaaaggtggttcacc 44302887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 483
Target Start/End: Original strand, 87181 - 87234
Alignment:
Q  430 tctcatcaacaacacataaaactctctaccatatatttcacttcccttcatctc 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  87181 tctcatcaacaacacataaaactctctaccatatatttcacttcccttcatctc 87234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 35789711 - 35789646
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  35789711 ggcttaatacatcatttagtctcttaacttatttttggttttcactttggtcccgtaactataaag 35789646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 44128456 - 44128331
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| ||| |||  |||||||||||||  |||||| |||||| ||||||||||||||  | ||||||| ||||  ||||| || ||||||    
T  44128456 aggcttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgt 44128357  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||||| |||||||| |||||||||||    
T  44128356 ttactattttggtcctctccgttagt 44128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 28103607 - 28103479
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||| ||||||||| ||| |||||||||||||| | ||||| |||||| || |||||||||||  | |||||||||||||||||   ||||||||||    
T  28103607 ggcttaacacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtt 28103508  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    |||  |||||||| | |||||| ||||||    
T  28103507 taccattttggtcctttccgtttgttttt 28103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 39590933 - 39591001
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||||    
T  39590933 aaaggcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaag 39591001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 41401820 - 41401677
Alignment:
Q  50 taatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttact 149  Q
    |||| ||| ||||||||  |||||||| |||| ||||| |||||||| || | ||||||||  ||||||||| |||| |||||||||| |  |||||||     
T  41401820 taattcataatttagtcctttaacttacttttggtttttactttggtcccttgactataaaatatttcaatt-ggtctcataaatattttttcgtttacc 41401722  T
Q  150 gttttggtcttctccgttagtttttaacatcaaatgtctaaggtg 194  Q
    |||||| || ||||| ||| |||||||||||||||||||||||||    
T  41401721 gttttgatcctctccattaatttttaacatcaaatgtctaaggtg 41401677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 15787626 - 15787495
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||| |||||||  |  ||||| |||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||||||| | || ||||    
T  15787626 aaaggcttaatatatcatttttttccttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgcc 15787527  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||  |||||||| ||||| ||| |||||    
T  15787526 gtttaccattttggtcctctccattaattttt 15787495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 27410802 - 27410686
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||   |||||||||||||||  | |||||||||| |||||||| |||| |||||    
T  27410802 ggcttaatacatcatttggtctcttaacttaattttagttttcaattt-aatccctaactataaagtgtctcaatttggt-ccataaatcttcttccgtt 27410705  T
Q  146 tactgttttggtcttctcc 164  Q
    |||  |||||||| |||||    
T  27410704 taccattttggtcctctcc 27410686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 41401623 - 41401561
Alignment:
Q  252 caaaaagagaaccgttggatcatataagtatgttgtatcttacgataaactatcaacgcctaa 314  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  41401623 caaaaagagaaccgtttgatcatataagtatgttgtatcttacgatgaactatcaacacctaa 41401561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 44305102 - 44304972
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||| |||||||  |   ||||||||||||| ||||||| |||||| ||||||||| ||||  | |||||||||||| |||||| ||| || |    
T  44305102 aaggcttaatatatcatttgattcattaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctg 44305003  T
Q  144 tttactgttttggtcttctccgttagttttt 174  Q
    |||||| |||||||| ||||||||| |||||    
T  44305002 tttactattttggtcatctccgttaattttt 44304972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 52658906 - 52659008
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| ||||||||||||||  ||||||||||||| |||||||||||||   |||||||||||| | |||||| ||||||||||    
T  52658906 ggcttaatacatgttttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtt 52659005  T
Q  146 tac 148  Q
    |||    
T  52659006 tac 52659008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 1273550 - 1273430
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||| ||||||| ||| |||||||||||||| ||||| | |||||| ||||||||||||||  | ||||||||||||||||| | || || ||||| |    
T  1273550 ttaatatatcatttggtcccttaacttatttttggttttaa-tttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgc 1273452  T
Q  149 tgttttggtcttctccgttagt 170  Q
    | |||||||| |||||||||||    
T  1273451 tattttggtcctctccgttagt 1273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 5688727 - 5688634
Alignment:
Q  77 tttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagt 170  Q
    ||||||||||||| |||||| ||||||||||||||  | |||||||||| |||||||| || || |||||||| |||||||| |||||||||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgttagt 5688634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 29686251 - 29686315
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaa 110  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||    
T  29686251 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaa 29686315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 218
Target Start/End: Complemental strand, 29688096 - 29687927
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||| |||| ||| |||||||||||||| |||||||||||||| |||||    |||||  | | ||  |  |||| ||  | || || |||    
T  29688096 aggcttaatacattatttggtcccttaacttatttttggttttcactttggtccccta----taaagtgtcttaaactcatcccttatgtcttttgtcgt 29688001  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  || |||||||| ||||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  29688000 tacctcttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtccacc 29687927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 38555375 - 38555244
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  | | ||||||||| || || | |||  |||||||||    ||||| | ||||||    
T  38555375 cttaacttatttttagtttttactttggtcccctaactataaagtgtattaatttggtcacagaagtcttcctccgtttactaacgtggtcatttccgtt 38555276  T
Q  168 agtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||||||||  | |||||||||||||||||||    
T  38555275 agtttttaatcttaaatgtctaaggtgaacca 38555244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 6140411 - 6140309
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    |||||||||| |||||| | ||||| |||||||| |||||||| | |||||||||||||||| | |||| ||||||||||||||  |||| |||| ||||    
T  6140411 tcaatttggttccataactcttctgtcgtttactattttggtcatttccgttagtttttaaccttaaatatctaaggtgaaccaactttataggtagtcc 6140312  T
Q  216 acc 218  Q
    |||    
T  6140311 acc 6140309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 55953971 - 55953849
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||| |||||||  || ||||||||||||||  |||||| |||||| || ||||||||||   | ||||||||||||| ||||| || |||||||||    
T  55953971 cttaatatatcatttgatcccttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgttta 55953872  T
Q  148 ctgttttggtcttctccgttagt 170  Q
    || |||||||| || ||||||||    
T  55953871 ctattttggtcctccccgttagt 55953849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 26393245 - 26393076
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    ||||||||| |||| ||| ||||||||||||||  |||| | |||| | |  |||||||||||  | ||||||||||||||||| | ||||| |||||||    
T  26393245 ttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcgtttac 26393146  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      |||||| |   |||||  ||||||||||  |||||||||||||||||||   ||| ||||||||||||    
T  26393145 cattttggacacttccgtctgtttttaacactaaatgtctaaggtgaaccaacattataggtggtccacc 26393076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 53400179 - 53400308
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| | | |||||||||||||||| ||||| |||||| || |||||||||||  | |||||||||||| |||||| || || |||    
T  53400179 aggcttaatacatgctttggccccttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgt 53400278  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||  |||| ||| |||||||||| ||||    
T  53400279 ttaccattttagtcctctccgttagatttt 53400308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 40143648 - 40143752
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||| ||| || ||||||||||||||  | |||||||| || ||||| | |||  ||||    
T  40143648 aggctcaatacattatttggtctcttaacttatttttagttttcattttagtcccctaactataaagtgtctcaatttgctctcataactcttcatccgt 40143747  T
Q  145 ttact 149  Q
    |||||    
T  40143748 ttact 40143752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 40146740 - 40146616
Alignment:
Q  50 taatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttact 149  Q
    ||||||||||||| ||| |||||| ||||||| ||||| | |||||| |  |||||||||||  | ||||||||||||||||| | |||| ||| |||||    
T  40146740 taatacatcatttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataagtcttcttccgattact 40146641  T
Q  150 gttttggtcttctccgttagttttt 174  Q
      | ||||| |||||||||||||||    
T  40146640 aatgtggtcatctccgttagttttt 40146616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 483
Target Start/End: Complemental strand, 41401409 - 41401365
Alignment:
Q  439 caacacataaaactctctaccatatatttcacttcccttcatctc 483  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  41401409 caacacataaaactctctaccatatatttcacttcccttcatctc 41401365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 44126591 - 44126717
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcattt--caatttggtcccataaatattctgccg 143  Q
    ||||||||||||  ||| ||| ||||||||||||||  |||||| ||||||   ||||||||||||  | |  |||||||||||| ||||| || |||||    
T  44126591 ggcttaatacattgtttggtcccttaacttatttttcattttcaatttggtcttctaactataaagagtctcacaatttggtcccttaaatcttatgccg 44126690  T
Q  144 tttactgttttggtcttctccgttagt 170  Q
    |||||| ||||||||||||| ||||||    
T  44126691 tttactattttggtcttctctgttagt 44126717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 87107 - 87149
Alignment:
Q  356 atcaacacattcatactccttagtcaattttcatataacccag 398  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  87107 atcaacacattcatactccttagtcaattttcatataacccag 87149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 3533728 - 3533582
Alignment:
Q  48 cttaatacatcatttagtctc-ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    ||||||||||  ||||||| | |||||||||||||| |||||| || | |  |||||||||||||  | |||||||||||| |||| | |||| | ||||    
T  3533728 cttaatacatgttttagtccccttaacttatttttaattttcatttcgatcacctaactataaagtgtctcaatttggtccgataactcttctactgttt 3533629  T
Q  147 actgttttggtcttctccgttagtttttaacatcaaatgtctaaggt 193  Q
    ||  |||||||| | ||||| |||||||||||  |||||||||||||    
T  3533628 accattttggtcctttccgtcagtttttaacactaaatgtctaaggt 3533582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 10403277 - 10403386
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||||  | | ||||||||| | ||||| ||  | ||||||    
T  10403277 cttaatacatcatttagtccct-aacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgttta 10403375  T
Q  148 ctgttttggtc 158  Q
    || ||||||||    
T  10403376 ctattttggtc 10403386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 21104432 - 21104310
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||||||| ||  ||||| |||||||| ||||||| |||||| ||||||||||||||  | ||||||||||| ||||  | ||||| |||    
T  21104432 aggcttaatatatcatttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgt 21104333  T
Q  145 ttactgttttggtcttctccgtt 167  Q
    ||||  |||||||| | ||||||    
T  21104332 ttaccattttggtcctttccgtt 21104310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 41401512 - 41401470
Alignment:
Q  356 atcaacacattcatactccttagtcaattttcatataacccag 398  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41401512 atcaacacattcatactccttagtcaattttcatataacccag 41401470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 48207815 - 48207685
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| ||||||| ||||||  ||||| |||||||  | |||||||||||  |||| | |||| ||||||||  || |||||  ||| ||||    
T  48207815 ttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtcccctctgtta 48207716  T
Q  169 gtttttaacatcaaatgtctaaggtgaacca 199  Q
     |||||||| | |||||||||||||||||||    
T  48207715 ttttttaaccttaaatgtctaaggtgaacca 48207685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 30682716 - 30682809
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctg 140  Q
    ||||||||||| |||| ||| |||||||||||||||||||||| |||||| || |||||||||||  | | |||||||||  |||||| |||||    
T  30682716 gcttaatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttctg 30682809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 31711086 - 31711215
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| | ||||| |||||| |  |||||||||||  | ||||||||||| ||||| | || || |||    
T  31711086 aggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgt 31711185  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||  ||||| || | |||||| ||||||    
T  31711186 ttaccattttgatcctttccgtttgttttt 31711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 48206154 - 48206283
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  |||  ||| |||| |||||||| ||||| | ||||||||| ||| |||||||  |||||||||| ||| |||| | |||| ||||    
T  48206154 aggcttaatacatgttttgatcttttaatttatttttggtttttattttggttccttaattataaagtgtttcaatttgatcctataacttttctaccgt 48206253  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| |||||||| | | |||||||||||    
T  48206254 ttactattttggtcatttacgttagttttt 48206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 5687216 - 5687292
Alignment:
Q  92 ttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||| || |||||||||||  | ||||||||||||||||||| || ||||||||||| |||||||| |||||||||    
T  5687216 ttggtcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 52660312 - 52660185
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    |||| ||||||||  |||| | ||||||  ||||||||||||| || | |||| |||||||||||| |||||||||||||  ||||| || | || |||     
T  52660312 ttaatttattttttatttttattttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcatttctgttt 52660213  T
Q  169 gtttttaacatcaaatgtctaaggtgaa 196  Q
    ||||||||| | |||||||| |||||||    
T  52660212 gtttttaaccttaaatgtcttaggtgaa 52660185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 43419474 - 43419324
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   || ||| ||| || || |||||||||||  | ||||||||||||| ||| | ||||||||||  || |||||||||  | ||||    
T  43419474 cttaacttattttattttctcagtttcgtcccttaactataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtctatttcgtt 43419375  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||||   |||||| ||||||||||||   ||| ||||||||||||    
T  43419374 agtttttaaccataaatgtataaggtgaaccaacattataggtggtccacc 43419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 52981249 - 52981143
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||||||||||| |||||| ||| |||||| |||  ||||||  ||||||| ||  | |||||  |||||||||||||||| || | |||    
T  52981249 cttaacttatttttagttttcattttggtccccaaactatcaagtgtttcaaactggtcccttatgtcttctgttgtttactgttttggtcctcgcagtt 52981150  T
Q  168 agttttt 174  Q
    |||||||    
T  52981149 agttttt 52981143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 54374074 - 54374012
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||||||||||||||||  || ||||||||||||| |||||||| |||||| ||||||||||    
T  54374074 aggcttaatacatcatttgatcccttaacttattttcagttttcaatttggtcccctaactat 54374012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 96802 - 96737
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    ||||||||||||  ||| ||| |||||||||||||  |||||||||||||| ||||||||||||||    
T  96802 ggcttaatacattgtttggtcccttaacttattttatgttttcactttggtcccctaactataaag 96737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 2293539 - 2293474
Alignment:
Q  153 ttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||| ||||||||||||||||| ||||||||||| | ||||| ||| ||||||| |||||||||    
T  2293539 ttggtcctctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccacc 2293474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 12396998 - 12396913
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | |||||||||||||    
T  12396998 aaaggcttaatacatgttttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 12396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 44159135 - 44159252
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccat 200  Q
    ||||||| |||  |||||||||||| ||| || | |||||||||||| | |||||||| |||||||||||||||||    |||| ||||||||||| ||     
T  44159135 taactattaagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctccgttagtttttaatcctaaatatctaaggtgaaacaa 44159234  T
Q  201 gtttaaaggtggtccacc 218  Q
      ||| ||||||||||||    
T  44159235 tattataggtggtccacc 44159252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 29833365 - 29833493
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| |||||| ||||||   | ||||||||||||| || || || || ||    
T  29833365 aaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcg 29833464  T
Q  144 tttactgttttggtcttctccgttagttt 172  Q
    ||  || |||||||| |||||||||||||    
T  29833465 ttacctcttttggtcctctccgttagttt 29833493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 56001389 - 56001261
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| ||||||||||||||  |||||| |||||  ||||||||||||||  | |||||||||||| ||||   |||  |||||    
T  56001389 ggcttaatacatgctttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataagctttcctccgtt 56001290  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    ||||  | ||||| ||| |||||||||||    
T  56001289 tactaatgtggtcctcttcgttagttttt 56001261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 30672186 - 30672060
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| || ||||| |||||  | ||||||||||||| ||  | |||||||||    
T  30672186 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtcccttatgtcttctgccgt 30672087  T
Q  145 ttactgttttggtcttctccgttagttt 172  Q
    |  ||||||||||| ||| |||||||||    
T  30672086 tacctgttttggtcctct-cgttagttt 30672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 36604857 - 36604790
Alignment:
Q  151 ttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||||| || ||| |||| |||||    
T  36604857 ttttggtcctctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccacc 36604790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 38371929 - 38371866
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaacta 106  Q
    |||||||||||||||||||  |||||||||||||||||  ||||||| |||| | |||||||||    
T  38371929 aaaggcttaatacatcattcggtctcttaacttattttctgttttcagtttgatcccctaacta 38371866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 3217732 - 3217606
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  |||  || ||||||||||||||   |||||||||||| |  ||||| |||||  ||| |||||| || ||||||| |||||  |    
T  3217732 aaggcttaatacattctttgatcccttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgttg 3217633  T
Q  144 tttactgttttggtcttctccgttagt 170  Q
    |||||| |||||||| | |||||||||    
T  3217632 tttactattttggtcctatccgttagt 3217606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 23752007 - 23752093
Alignment:
Q  42 gaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||| |||||||||  ||| ||| |||||||||||||||| ||||| |||||| |||||||| ||||   | |||||||||||||    
T  23752007 gaaaggtttaatacatgttttggtcccttaacttatttttagatttcaatttggtcccctaactttaaattgtctcaatttggtccc 23752093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 29834553 - 29834427
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||| | |||||||||||| | || |||||||| |||| ||  | ||||||||||    
T  29834553 ggcttaatacatgctttggtcccttaacttattttcggatttcattttgatcccctaactataatgtatctcaatttgatcccttatgtcttctgccgtt 29834454  T
Q  146 tactgttttggtcttctccgttagttt 172  Q
      || |||||||| |||| ||||||||    
T  29834453 acctcttttggtcatctctgttagttt 29834427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 26376325 - 26376410
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||| ||  ||| ||| ||||| |||||||| ||||||| |||| | ||||||||||||| | | |||||||||||||||||    
T  26376325 gcttaatatatgctttggtcccttaaattatttttggttttcattttgatcccctaactataaaacgtctcaatttggtcccataa 26376410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 28189421 - 28189332
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| || |||||||||||   ||||| |||||| || ||||| |||| | |||||||||||||||||||    
T  28189421 aaaggcttaatacatgctttggtccctcaacttatttttgaatttcattttggtcccttaactttaaatcgtttcaatttggtcccataa 28189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 38417571 - 38417672
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||   || ||| |||||| || ||||||| |||  | ||||||||||||||||||| || || |||||||| ||| |||| |||||||||    
T  38417571 ttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgtta 38417670  T
Q  169 gt 170  Q
    ||    
T  38417671 gt 38417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 54372741 - 54372802
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||| |||||| | ||||||||    
T  54372741 ggcttaatacatcatttggtcccttaacttattttccgttttcaatttggtcctctaactat 54372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 15445431 - 15445511
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtc 126  Q
    ||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| |||||| |||||||  | |||||||||||    
T  15445431 ggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtc 15445511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 49923918 - 49923858
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaact 105  Q
    |||||||||| ||||||| ||| ||||||||||||| |||||||| |||||| || |||||    
T  49923918 aggcttaatatatcatttggtcccttaacttattttcagttttcaatttggtcccttaact 49923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 50530574 - 50530670
Alignment:
Q  122 tggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||||| | ||||  |||||||| |||||||| | || |||| |||||||| | ||| |||||||||||||||  |||| |||| |||||||    
T  50530574 tggtcccataactcttctatcgtttactattttggtcatttctgttaatttttaaccttaaaagtctaaggtgaaccaactttataggtagtccacc 50530670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 28370759 - 28370660
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||  ||| ||| |||||||||||||| | ||||| |||||| | |||||| ||||   | ||||||||||||| ||||||| || ||||||||    
T  28370759 ttaatacatgctttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtcccctaaatatacttccgtttac 28370660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 37642664 - 37642601
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||| |||| ||| |||||||||||||  ||||||| ||| || ||||||||||    
T  37642664 aaggcttaatacattatttggtcccttaacttattttctgttttcaatttagtcccctaactat 37642601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 28102161 - 28102243
Alignment:
Q  136 ttctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||||||||  |||||||| | ||||||  |||||||| | |||||||||||||||| ||  |||| ||||| ||||||    
T  28102161 ttctgccgtttaccattttggtcatttccgtttatttttaaccttaaatgtctaaggtgaatcaactttataggtgatccacc 28102243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 31712559 - 31712477
Alignment:
Q  114 tttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
    |||||||||| |||||||| | |||| ||||||||  |||||||| | ||||||  |||||||| | |||| |||||||||||    
T  31712559 tttcaatttgatcccataagtcttcttccgtttaccattttggtcatttccgtttatttttaaccttaaatatctaaggtgaa 31712477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 46794839 - 46794917
Alignment:
Q  50 taatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||  ||| ||| |||||||||||||| | ||||| |||||| |||||||| ||||   |||||||||||||||    
T  46794839 taatacatactttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggtccc 46794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 306594 - 306703
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||| | ||||| |||||| |||||||| ||||   ||||||||||||||| ||| ||| |  |||||  |  |||||||| ||||  ||    
T  306594 cttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggtcccctaagtatacatccgttacccattttggtcatctcgatt 306693  T
Q  168 agtttttaac 177  Q
    ||||||||||    
T  306694 agtttttaac 306703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 23202232 - 23202321
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||| ||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  23202232 aaaggcttaatacatgctttggtcccttaatttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 23202321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 30441601 - 30441694
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatat 136  Q
    |||||||||||||||  ||||||| ||||||||||||||   ||||| |||||| |||||| | ||||   | ||||||| ||||| |||||||    
T  30441601 aaaggcttaatacatgttttagtcccttaacttatttttgaatttcaatttggtcccctaaatttaaactgtctcaatttagtcccctaaatat 30441694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 38370499 - 38370560
Alignment:
Q  253 aaaaagagaaccgttggatcatataagtatgttgtatcttacgataaactatcaacgcctaa 314  Q
    ||||||||||| ||||||||||||| || ||||||||| |||| | ||| |||||| |||||    
T  38370499 aaaaagagaactgttggatcatatatgtctgttgtatcatacggtgaacaatcaacacctaa 38370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 38553927 - 38554052
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||| ||| ||||| |||||||  ||||| | ||||||   ||||||||||||  | ||||||||||| ||||| | |||  ||||||||    
T  38553927 ttaatacatcatttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtctcataagtcttcctccgtttac 38554026  T
Q  149 tgttttggtcttctccgttagttttt 174  Q
    |  | | ||| ||||| |||||||||    
T  38554027 taatgtagtcatctccattagttttt 38554052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 47667197 - 47667301
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| ||||| | |||||| | ||||||||||||  | ||||||||||| ||||| | |||  |||||||||  | ||||| ||| |||||    
T  47667197 ttaacttatttttggtttttattttggt-ctctaactataaagtgtctcaatttggtctcataagtcttcctccgtttactaatatggtcctctgcgtta 47667295  T
Q  169 gttttt 174  Q
    ||||||    
T  47667296 gttttt 47667301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 123; Significance: 5e-63; HSPs: 4)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 77297 - 77128
Alignment:
Q  51 aatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactg 150  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  77297 aatacatcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactg 77198  T
Q  151 ttttggtcttctccgttagtttttaacatcaaa--tgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||||||||||||| | ||| ||||||||  ||||||||||||||||| |||||||||||||||||    
T  77197 ttttggtcttctccgttaatgtttgacatcaaatgtgtctaaggtgaaccatatttaaaggtggtccacc 77128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 77081 - 77019
Alignment:
Q  252 caaaaagagaaccgttggatcatataagtatgttgtatcttacgataaactatcaacgcctaa 314  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  77081 caaaaatagaactgttggatcatataagtctgttgtatcttacgatgaactatcaacgcctaa 77019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 76977 - 76935
Alignment:
Q  356 atcaacacattcatactccttagtcaattttcatataacccag 398  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  76977 atcaacacattcatactccttaatcaattttcatataacccag 76935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 483
Target Start/End: Complemental strand, 76871 - 76827
Alignment:
Q  437 aacaacacataaaactctctaccatatatttcacttcccttcatctc 483  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  76871 aacaacacataaaactct--accatatatttcagttcccttcatctc 76827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 5e-57; HSPs: 86)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 39546798 - 39546626
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||| ||| ||  |||||||||||||  ||||||||||||||||||||||| |||||  | |||||||||||||||||||||| |||||||    
T  39546798 ggcttaatacatccttttgttccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtt 39546699  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  39546698 taccgttttggtcatctccgttagtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtccacc 39546626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 117045 - 117215
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||| |||  || |||||||||||||| ||||||| |||||| |||||| ||||||   |||||||||| |||||||||| ||||| ||||||    
T  117045 cttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgttta 117144  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  117145 ttgttttggtcctctccgttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccacc 117215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 36756058 - 36756231
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | |||||| || |||||||||||  ||||||| ||||| ||||||| || || |||    
T  36756058 aggcttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgt 36756157  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||    
T  36756158 ttactattttggtcatctccgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcacc 36756231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 13367149 - 13366999
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   ||||||||||||| || |||||||||||  ||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  13367149 cttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgtt 13367050  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||||| | |||||||||||||||||||  |||| ||||||||||||    
T  13367049 agtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccacc 13366999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 37276363 - 37276197
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| ||||| ||||||||  ||||||||||| | || |||||||||||  | ||||||||||||||||||| || ||||||||    
T  37276363 gcttaatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgttt 37276264  T
Q  147 actgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggt 213  Q
    | | | |||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  37276263 attatattggtcctctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggt 37276197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 36070172 - 36070345
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||  || ||||| |||||||| ||||||| |||||| ||||||||||||||  | |||||||| |||||||||| |||||||||    
T  36070172 aggcttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgt 36070271  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||||||| || |||||||| ||| || | |||||||||||||||||||  |||| ||||||||||||    
T  36070272 ttactattttggtcctccccgttagtctttgaccttaaatgtctaaggtgaaccaactttataggtggtccacc 36070345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 16363934 - 16363780
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| || |||| ||| |||||||||||||| |||||||||||||| | |||||||||||| || |||||||| ||||||||||  ||||| ||    
T  16363934 aggcttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgt 16363835  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||| |||||||| |||||||||||| ||||| | |||||||||||||||||||    
T  16363834 ttactattttggtcctctccgttagttattaactttaaatgtctaaggtgaacca 16363780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 69 - 218
Target Start/End: Original strand, 7486095 - 7486244
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    |||| |||||||| ||||||| |||| | || |||||||||||   |||||||||||||||||||| || ||| ||||||| |||||||| |||||||||    
T  7486095 ttaatttatttttggttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgtta 7486194  T
Q  169 gtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||    
T  7486195 gtttttaacatcaaatgtctaaagtgaaccatgtttaaatgttgtccacc 7486244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 44606133 - 44606306
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||    | || |||||||||| |||||||||||||| ||||||||||| ||  ||||||||||||||||||||| |||| | ||    
T  44606133 aggcttaatacatcatttttggttttcacttatttttggttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgt 44606232  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||| | ||||| || ||||| |||||||||||| | |||||||||||||||||||  |||| ||||||||||||    
T  44606233 ttattattttgatcctctccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccacc 44606306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 36940153 - 36940026
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||| | ||||||||||||||  ||||||||||||  ||||||| |||||||||||    
T  36940153 gcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgttt 36940054  T
Q  147 actgttttggtcttctccgttagttttt 174  Q
    ||| |||||||| ||||||||| |||||    
T  36940053 actattttggtcatctccgttaattttt 36940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 35943902 - 35944075
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatt-tcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||| ||| ||| |||||||||||||| ||||||| |||||| || ||| ||||||    | ||||||||||||||||||| || ||| ||    
T  35943902 ggcttaatacatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagt 35944001  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||||||| |||||||||||||||||| | |||||||||||||||||||  |||| ||||| ||||||    
T  35944002 ttactattttggtcatctccgttagtttttaactttaaatgtctaaggtgaaccaactttataggtgatccacc 35944075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 10052099 - 10052271
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||| ||||||| ||| ||||||||||| ||  ||||||||||||| |||||| |||||||  | |||| |||||||| ||  |  |||||||||    
T  10052099 ggcttaatatatcatttggtcccttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccgtt 10052198  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      || |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  10052199 acctcttttggtcatctcctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccacc 10052271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 19913490 - 19913659
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||| ||| ||| ||||||||||||||   ||||| |||||| | ||||||||||||  ||||||||||||||||||| | |||||| |||||     
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttat 19913589  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      |||||||| |||||||||||||||||| | |||| ||||||||||||||  |||| || |||||||||    
T  19913590 cattttggtcctctccgttagtttttaaccttaaatttctaaggtgaaccaactttatagatggtccacc 19913659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 43275744 - 43275869
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||  | ||||||| ||||||||| | || ||||||    
T  43275744 aggcttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgt 43275843  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||| | |||||||| || ||||||||    
T  43275844 ttattattttggtcctcaccgttagt 43275869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 41868037 - 41867913
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||| || |||||||    
T  41868037 ggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgtt 41867938  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |  | |||| ||| |||||||||||    
T  41867937 ttttattttagtcctctccgttagt 41867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 31623900 - 31624023
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  ||||||||||||||||||||| || || |||    
T  31623900 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgt 31623999  T
Q  145 ttactgttttggtcttctccgtta 168  Q
    ||| | |||| ||| |||||||||    
T  31624000 ttattattttagtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 38591128 - 38591010
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||| |||||| ||||||||||||||  | ||||||||||||||||||| || |||||||    
T  38591128 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtt 38591029  T
Q  146 tactgttttggtcttctcc 164  Q
    |||| |||||||| |||||    
T  38591028 tactattttggtcctctcc 38591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 44103327 - 44103245
Alignment:
Q  136 ttctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44103327 ttcttccgtttcctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 44103245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 29739765 - 29739636
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||| |||| | ||||||||||||||  | ||||||||||||||||||| |||| ||||    
T  29739765 aggcttaatacatcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgt 29739666  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||  |||||||| | |||||| ||||||    
T  29739665 ttaccattttggtcatgtccgtttgttttt 29739636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 24068322 - 24068453
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||||||| | |||  ||    
T  24068322 aaaggcttaatacatgctttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctcc 24068421  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    |||||||  ||||||| |||||||||||||||    
T  24068422 gtttactaatttggtcctctccgttagttttt 24068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 31625505 - 31625383
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||  || |||||||||||||| ||||||| |||||| |||||| |||||||  | ||||||||||||||||||| || ||||||    
T  31625505 aggcttaatacatcatttgatc-cttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgt 31625407  T
Q  145 ttactgttttggtcttctccgtta 168  Q
    ||||| |||||||| |||||||||    
T  31625406 ttactattttggtcctctccgtta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 36071500 - 36071374
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| |||||| || |||||||| || ||||||| |||||||||||| | |||| ||||    
T  36071500 aggcttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataactcttctaccgt 36071401  T
Q  145 ttactgttttggtcttctccgttagtt 171  Q
    |||   |||||||| |||| |||||||    
T  36071400 ttatcattttggtcatctctgttagtt 36071374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 36938750 - 36938848
Alignment:
Q  120 tttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||||| ||||    
T  36938750 tttggtctcataaatcttctgccgtttactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggttcacc 36938848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 24069572 - 24069395
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctg 140  Q
    ||||||||||||||  |  ||| ||| |||||||||||||| ||||||| |||| | || |||||||||||  | ||||||||||||||||| | |||||    
T  24069572 agaaaggcttaataatttctttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctg 24069473  T
Q  141 ccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||  |||||||| | |||||  ||||||||||  |||||||||||||| ||||   ||| ||||||||||||    
T  24069472 ccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaacattataggtggtccacc 24069395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 21961818 - 21961990
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| ||||| ||||||||   ||||| |||  |  ||||| || ||| | | |||| ||| |||| ||  | |||| |||||    
T  21961818 ggcttaatacatcatttggtcccttaatttatttttgactttcattttaatctcctaattaaaaaacgtctcaaattgatcccttatgtcttcttccgtt 21961917  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      || |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21961918 atctcttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccacc 21961990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 21670058 - 21670231
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||  || ||| ||||||||| || |  || ||| | |||| ||||||||| ||| | | |||| |||||||| ||  | |||| ||||    
T  21670058 aggcttaatacatccgttggtcccttaacttaattctttttctcagtatggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttccgt 21670157  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  || |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||||    
T  21670158 tacctcttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccacc 21670231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 37274905 - 37275010
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| | ||||| |||||| | ||||||||||||  | |||||||| |||||||||| |||||||||||||| |||||||| |||||||||    
T  37274905 ttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T
Q  169 gttttt 174  Q
    ||||||    
T  37275005 gttttt 37275010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 37324806 - 37324637
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    ||||||| ||||||| || |||||||||||||| ||||| | |||||| |||||||||||||   | ||||||||||| || |||| |||  || |||||    
T  37324806 ttaatacgtcatttaatcccttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttcgaccatttac 37324707  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | ||||| |  ||||||||| ||||| || | |||||||||||||||||||  |||| ||||||||||||    
T  37324706 tattttgtttctctccgttaatttttcactttaaatgtctaaggtgaaccaactttataggtggtccacc 37324637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 41866888 - 41867013
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||| ||||| ||| ||||||||||||||  ||||||||||| | || |||||||||||  ||||||||||||||||||||| ||  ||| |    
T  41866888 aggcttaatacaccatttggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccat 41866987  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||||| |||||||| |||| ||||||    
T  41866988 ttactattttggtcatctctgttagt 41867013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 176
Target Start/End: Original strand, 37979 - 38110
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| ||| ||| |||||||||||||| ||||| | ||| || ||||||||||||||  ||| ||||||||| ||||| | |||  ||||    
T  37979 aggcttaatacatcgtttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgt 38078  T
Q  145 ttactgttttggtcttctccgttagtttttaa 176  Q
    ||||| || ||||| |||||||||||||||||    
T  38079 ttactattgtggtcctctccgttagtttttaa 38110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 12281878 - 12281729
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    ||||| ||||||||  ||||||||||||| || ||||||||||   | ||||||| ||| | ||||| |||| | |||||| |||||| || ||||||||    
T  12281878 cttaatttatttttgattttcactttggtcccgtaactataaattgtctcaattttgtctcgtaaattttctac-gtttaccgttttgatcctctccgtt 12281780  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||||||||||| ||||| ||| |||||| || |||||||||||||    
T  12281779 agtttttaacatcaaatatctaatgtggaccatgattcaaggtggtccacc 12281729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 10053868 - 10053783
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||  | |||| ||||||||    
T  10053868 aaaggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtccc 10053783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 2421392 - 2421244
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    ||||||||||||| | || ||| ||| || || ||| ||| |||  |||||||||||||||| |||| |||||||||||| | |||||||| |||  |||    
T  2421392 cttaacttattttaatttatcagtttagtcccttaaatattaagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctctttgtt 2421293  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcca 216  Q
    |||||||||| | |||||||||||||||||||  |||| || |||||||    
T  2421292 agtttttaaccttaaatgtctaaggtgaaccaactttatagatggtcca 2421244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 38589813 - 38589924
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| | ||||||||||||    ||||||||||||||||||| || || |    
T  38589813 aaaggcttaatacatcatttggtcccttaacttattttt-gttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtc 38589911  T
Q  143 gtttactgttttg 155  Q
    ||||||| |||||    
T  38589912 gtttactattttg 38589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 41522739 - 41522639
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    |||||||||||| |||| | ||||||||||||||||||| ||| | ||||| | ||||||||||||||| | |||| ||||||||||||||| |||||||    
T  41522739 tcaatttggtcctataagtcttctgccgtttactgttttagtcctttccgtcaatttttaacatcaaatatttaagatgaaccatgtttaaaagtggtcc 41522640  T
Q  216 a 216  Q
    |    
T  41522639 a 41522639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 39325950 - 39325787
Alignment:
Q  51 aatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactg 150  Q
    |||| ||| ||| ||| |||||||||||||  ||| ||| ||| || ||||||||| ||| | ||| || |||||||| ||  | |||| |||||  ||     
T  39325950 aatatatcgtttggtcccttaacttattttctgttctcattttagtcccctaactaaaaaacgttttaaattggtcccttatgttttcttccgttacctc 39325851  T
Q  151 ttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtc 214  Q
    |||| ||| |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39325850 ttttagtcatctctgctagtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtc 39325787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 13513414 - 13513587
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| ||| ||| ||||||||| || |  || ||| | |||| ||||||||| ||| | | |||| |||||||| ||  | |||| | ||    
T  13513414 aggcttaatacatcctttggtcccttaacttaattctttttctcaatatggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttctgt 13513513  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  || |||||||| |||||||||| |||||||||||||||| |||| |||||||| |||||| ||||||||||    
T  13513514 tacctcttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccacc 13513587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 13602947 - 13603120
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| ||| ||| ||||||||| || |  || ||| | |||| ||||||||| ||| | | |||| |||||||| ||  | |||| | ||    
T  13602947 aggcttaatacatcctttggtcccttaacttaattctttttctcaatatggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttctgt 13603046  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  || |||||||| |||||||||| |||||||||||||||| |||| |||||||| |||||| ||||||||||    
T  13603047 tacctcttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccacc 13603120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 188
Target Start/End: Original strand, 37472395 - 37472540
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| |||  ||||||||||||| ||||| | |||||| | ||||||||||||  | ||||||||||||||||| | || || |    
T  37472395 aaaggcttaatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtc 37472494  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtct 188  Q
    ||||||  |||||||| | ||| ||  |||||||| | ||||||||    
T  37472495 gtttaccattttggtcctttccatttatttttaaccttaaatgtct 37472540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 13363631 - 13363527
Alignment:
Q  114 tttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggt 213  Q
    ||||||||||||||| ||  | |||||  |||  || |||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  13363631 tttcaatttggtcccttatgttttctgtggttacctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggt 13363532  T
Q  214 ccacc 218  Q
     ||||    
T  13363531 gcacc 13363527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 37323343 - 37323431
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaat 134  Q
    ||||||||||||||||| ||| ||||| |||||||| ||||||| ||||||||||||||||||||   | |||||||| ||||||||||    
T  37323343 ggcttaatacatcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaat 37323431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 29738286 - 29738417
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||| ||| ||| ||||||||||||||  |||||| ||||||    |||||||||||  | ||||||| ||| ||||| | ||||||||||    
T  29738286 ggcttaatacatcgtttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtt 29738385  T
Q  146 tactgttttggtcttctccgttagtttttaac 177  Q
    |||  |||||||| |||||||| |||||||||    
T  29738386 tacctttttggtcctctccgtttgtttttaac 29738417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 43278045 - 43277930
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||| |||||||  || ||||||||||||||  |||| | |||||| |||||||||||||   | ||||||||||||| ||||| || ||||    
T  43278045 aaaggcttaatatatcatttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgcc 43277946  T
Q  143 gtttactgttttggtc 158  Q
    ||||||| ||||||||    
T  43277945 gtttactattttggtc 43277930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 43386824 - 43386737
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||| | ||| |||||||||||||| ||||||| |||||| |||||||||||||   | |||||||||||||||||    
T  43386824 aggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataa 43386737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 21267233 - 21267299
Alignment:
Q  152 tttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| |||||| || |||||||||||||    
T  21267233 tttggtcctctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccacc 21267299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 39325 - 39193
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||||||| ||||||||||| |||| ||||| |||||| |||||||| ||||   ||||||||||||||| ||| ||| | | |||    
T  39325 aggcttaatacatactttagtcccttaacttattattagatttcaatttggtcccctaactttaaactgtttcaatttggtcccctaagtatacagtcgt 39226  T
Q  145 ttactgttttggtcttctccgttagtttttaac 177  Q
    |  |  |||||||| |||| |||||||||||||    
T  39225 tacccattttggtcctctcggttagtttttaac 39193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 35945558 - 35945446
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||| |||| ||| |||||||||||||| ||||||| ||| || || ||||||||||   | ||| |||||||||||| || |||||| |||    
T  35945558 ggcttaatacattatttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtt 35945459  T
Q  146 tactgttttggtc 158  Q
    |||| ||||||||    
T  35945458 tactattttggtc 35945446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 1570330 - 1570203
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| |||  |||||||||||||  |||||| ||||||  | |||||||||||  | |||||||||||   ||||| || ||||    
T  1570330 aaaggcttaatacattgtttggtcctttaacttatttttcattttcaatttggtctcataactataaagtgtctcaatttggtctattaaattttatgcc 1570231  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    ||||||| |||||||| |||||||||||    
T  1570230 gtttactattttggtcatctccgttagt 1570203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 4807364 - 4807483
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||  |||  |||||||||||||  |||| | |||||| |||||||||||| |  ||||||||||||||||||||| ||  ||||||||     
T  4807364 ttaatacatcattcggtcctttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatcttacgccgtttat 4807463  T
Q  149 tgttttggtcttctccgtta 168  Q
    | |||||||  |||||||||    
T  4807464 tattttggttctctccgtta 4807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 8095363 - 8095494
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   || ||| |||||| || ||||||| |||  | ||||||||||||||| | | || || |||||||| |||||||| | ||||||    
T  8095363 cttaacttattttattttctcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttccgtt 8095462  T
Q  168 agtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||||||||  | |||||||||||||||||||    
T  8095463 agtttttaatcttaaatgtctaaggtgaacca 8095494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 39515193 - 39515364
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||| |||  ||| ||| |||||||||||||| ||||||| |||| | |||| |||||||||  | ||||||||||| ||||| | || |||| |    
T  39515193 aggcttaatgcatgttttggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccat 39515292  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcca 216  Q
    ||||  |||||||| | |||||   |||||||||  |||||||||||||| ||||   ||| ||||||||||    
T  39515293 ttacctttttggtcatttccgtctatttttaacactaaatgtctaaggtggaccaacattataggtggtcca 39515364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 3237435 - 3237536
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||| | ||||| |||||| |||||||| ||||   | |||||||||||||||||||||||||||||||||  ||||| || | ||||||    
T  3237435 cttaacttatttttggatttca-tttggtcccctaactttaaactgtctcaatttggtcccataaatattctgccgtttacaattttgatcatttccgtt 3237533  T
Q  168 agt 170  Q
    |||    
T  3237534 agt 3237536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 20308600 - 20308753
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||  ||  ||||||||||||||||   || ||| ||| ||  | ||||||| |||  | ||||||||||| ||||| | ||||| ||||    
T  20308600 ggcttaatacatcccttgatctcttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtt 20308699  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||| |||||||| | ||| ||| |||||||| | |||||||||||||||||||    
T  20308700 tactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaacca 20308753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 21095233 - 21095386
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||  ||  ||||||||||||||||   || ||| ||| ||  | ||||||| |||  | ||||||||||| ||||| | ||||| ||||    
T  21095233 ggcttaatacatcccttgatctcttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtt 21095332  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||| |||||||| | ||| ||| |||||||| | |||||||||||||||||||    
T  21095333 tactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaacca 21095386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 27750719 - 27750618
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| ||||||| |||| | |  ||| ||||||| || ||||||||||||||||||| || |   ||||||| ||||||||||||||||||    
T  27750719 ttaacttatttttggttttcaatttgatccgttaattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgtta 27750620  T
Q  169 gt 170  Q
    ||    
T  27750619 gt 27750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 45385916 - 45385787
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| || ||| |||||||  |||||||||| ||| |||||| || || |||    
T  45385916 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgt 45385817  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||  |||| ||| |||||||||| ||||    
T  45385816 ttaccattttagtcctctccgttagatttt 45385787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 36734666 - 36734566
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||| |||||||||   || ||||||||||||||  |||||||||||||  ||| ||||||| |  | ||||||||||||||||||| |||||||||    
T  36734666 aggcttattacatcattggatcccttaacttatttttcattttcactttggtcgcctgactataatgtgtctcaatttggtcccataaattttctgccgt 36734567  T
Q  145 t 145  Q
    |    
T  36734566 t 36734566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 19915028 - 19914901
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| |||  ||||||||||||  ||||||| |||||| || |||||||||||  | ||||||||  ||||||||| |||| ||||    
T  19915028 aggcttaatacatggtttggtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgt 19914929  T
Q  145 ttactgttttggtcttctccgttagttt 172  Q
    ||||  |||||||| | |||||| ||||    
T  19914928 ttaccattttggtcatatccgtttgttt 19914901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 39220693 - 39220824
Alignment:
Q  65 tctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctcc 164  Q
    |||||||||||||||| | || ||| ||||||    ||||||| |||  |||||||||| | || ||| | |||||||||||||| |||| ||  ||||     
T  39220693 tctcttaacttattttaatttctcattttggtctattaactattaagtgtttcaatttgattccttaagtcttctgccgtttactattttcgttatctct 39220792  T
Q  165 gttagtttttaacatcaaatgtctaaggtgaa 196  Q
    ||||||||||||| | ||||||||||||||||    
T  39220793 gttagtttttaaccttaaatgtctaaggtgaa 39220824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 21267162 - 21267240
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    |||||||||  ||| ||| |||||||||||||| |||||||||||||| | ||||||||||||  | ||||||||||||    
T  21267162 ttaatacattgtttggtcgcttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatttggtcc 21267240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 39516604 - 39516490
Alignment:
Q  60 tttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtct 159  Q
    ||||||| ||||| |||||||||||||||| |||  | ||||||| ||||||| ||| ||||| ||||||||| | |||  |||||||||  | || ||     
T  39516604 tttagtcccttaaattatttttagttttcattttaatcccctaacaataaagcgttttaatttagtcccataagttttcctccgtttactaatgtgatcc 39516505  T
Q  160 tctccgttagttttt 174  Q
    |||||||||||||||    
T  39516504 tctccgttagttttt 39516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 14820192 - 14820289
Alignment:
Q  50 taatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    |||||||||| || ||| |||||||||||||| | ||| | |||||| ||||||||||||||  | ||||||| ||||||||||| || || ||||||    
T  14820192 taatacatcaattggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgttta 14820289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 37474157 - 37474076
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    |||||||||||||||||  || |||||||||||| | ||||||| |||||| || |||||||||||  | ||||||||||||    
T  37474157 ggcttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcc 37474076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 15988997 - 15989085
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||| |||||||||||||||  ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  15988997 aaggcttaatacatgctttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 15989085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 6844694 - 6844612
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||||||||||| ||||||  | |||||||||||||    
T  6844694 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtccc 6844612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 7487506 - 7487444
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaa 110  Q
    ||||||||||||||| |||  |||| |||||||| |||||||||||| | |||||||||||||    
T  7487506 cttaatacatcatttggtcctttaatttatttttcgttttcactttgatcccctaactataaa 7487444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 8395064 - 8395162
Alignment:
Q  120 tttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||||||| | |||| ||||||||  |||||||| |||||||||||||||||| | |||||  |||  |||||||  |||  ||||||||||||    
T  8395064 tttggtcccataattcttcttccgtttaccattttggtcctctccgttagtttttaaccttaaatggttaaaatgaaccaactttgtaggtggtccacc 8395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 31871457 - 31871543
Alignment:
Q  113 atttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||| ||||||||||||| ||| ||||| |||||| | |||||||| | || ||||||||||||| | ||| |||||||||| ||||    
T  31871457 attttaatttggtcccatgaatcttctgtcgtttattattttggtcctttctgttagtttttaaccttaaacgtctaaggtggacca 31871543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 42307490 - 42307552
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||||||   ||||||||||||||||  ||||||| |||||| ||||||||||    
T  42307490 aggcttaatacatcattcgatctcttaacttattttctgttttcaatttggtcccctaactat 42307552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 3237762 - 3237697
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaa 110  Q
    |||||||||||||||||| ||| |||||||||||||| | ||||| ||| || |||||||| ||||    
T  3237762 aggcttaatacatcatttggtcccttaacttatttttggatttcattttagtcccctaactttaaa 3237697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 39544925 - 39544990
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||| ||||  | |||||||||||    
T  39544925 ggcttaatacatcatttggtcccttaacttattttctgttttcactctggtcgcttaactataaag 39544990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 40102214 - 40102302
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| |  ||||| |||| ||| |||||||||||||||||    
T  40102214 aaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctttaactttaaaccatctcaatttggtcccataa 40102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 8395018 - 8395069
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggt 96  Q
    |||||||||| ||||||| |||||||||||||||||| ||||| | ||||||    
T  8395018 aggcttaatatatcatttggtctcttaacttatttttggtttttattttggt 8395069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 11081155 - 11081092
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||||||||  || |||||||||||||  ||||||| |||||| | ||||||||    
T  11081155 aaggcttaatacatcatttgatcccttaacttattttctgttttcaatttggtcctctaactat 11081092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 16346092 - 16346175
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    |||||||||||||||  | |||| ||||||||||||| | || ||| |||||| || ||||||| || | ||||||||||||||    
T  16346092 aaggcttaatacatctctcagtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcc 16346175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 39349561 - 39349474
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| ||| ||||||||||| |||||    
T  39349561 aggcttaatacatattttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccatctcaatttggtctcataa 39349474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 3271155 - 3271241
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  3271155 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataa 3271241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 21551917 - 21552003
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| ||||  || |||||||||||||||||    
T  21551917 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataa 21552003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 21552963 - 21553049
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| ||||  || |||||||||||||||||    
T  21552963 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataa 21553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 38790374 - 38790296
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttgg 124  Q
    |||||||||||||| ||  || |||||||||||||   |||||| ||||||||||||||||| || | | |||||||||    
T  38790374 ggcttaatacatcagttgatcccttaacttattttcgtttttcattttggttccctaactattaaacgtctcaatttgg 38790296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 3271890 - 3271979
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||| |||| ||| ||||||||||||||   ||||| |||| | || ||| | |||| | | |||||||||||||||||    
T  3271890 aaaggcttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataa 3271979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 8096667 - 8096546
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||   ||||| |||||||||||||   |||||| ||| ||  | ||||||| |||| | | ||||||||| ||||| | || | ||||    
T  8096667 aggcttaatacatcccctagtcccttaacttattttattttttcagtttagtctcttaactattaagcgtcttaatttggtctcataactcttttaccgt 8096568  T
Q  145 ttactgttttggtcttctccgt 166  Q
    ||||| |||||||| |||||||    
T  8096567 ttactattttggtcctctccgt 8096546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 15989136 - 15989225
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||| ||||||| || |||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  15989136 aaagacttaatatatgatttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 15989225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 30864579 - 30864490
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||| |||| ||| ||||||||||||||   ||||| |||| | || ||| | |||| | | |||||||||||||||||    
T  30864579 aaaggcttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataa 30864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 40102469 - 40102380
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||| |||| ||| |||| |||||||||   ||||| |||| | || ||||| |||| ||| ||||||| |||||||||    
T  40102469 aaaggcttaatacatgattttgtcccttagcttatttttgaatttcattttgatcccttaactttaaaccatctcaatttagtcccataa 40102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 36938895 - 36938935
Alignment:
Q  253 aaaaagagaaccgttggatcatataagtatgttgtatctta 293  Q
    |||| |||||||||||||||||||| || ||||||||||||    
T  36938895 aaaaggagaaccgttggatcatataggtctgttgtatctta 36938935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 7e-50; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 44 - 216
Target Start/End: Complemental strand, 29424735 - 29424563
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  ||| ||| |||||||||||||| ||||| || ||||| ||||||||||||||  ||||||||||||||| | ||||||||||||    
T  29424735 aaggcttaatacattgtttggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccg 29424636  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcca 216  Q
    |||| |||||||||| |||| |||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  29424635 tttattgttttggtcctctctgttagttactaacatcaaatgtctaagatgaaccatgtttaaaggtggtcca 29424563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 23177668 - 23177841
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccc-taactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||| ||| ||||| |||||||| ||||||| |||||| ||| |||||||||||  | ||||||||||||||||||| |||||||||    
T  23177668 ggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgt 23177767  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  |||||||| |||||||||||||||||||| |||  |||||| |||||||| ||||||| |||| ||||    
T  23177768 ttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcacc 23177841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 23588925 - 23589098
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccc-taactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||| ||| ||||| |||||||| ||||||| |||||| ||| |||||||||||  | ||||||||||||||||||| |||||||||    
T  23588925 ggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgt 23589024  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  |||||||| |||||||||||||||||||| |||  |||||| |||||||| ||||||| |||| ||||    
T  23589025 ttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcacc 23589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 12852881 - 12853053
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| ||||||||| |||| | ||||| |||||| ||||||||||||||  | ||||||||||||||||||| ||||  ||||    
T  12852881 ggcttaatacatgctttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtt 12852980  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||| |||||||| |||||||||| |||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  12852981 tactattttggtcatctccgttagattttaacatcaaaaatctaaggtgaaccatatttaaaggtggttcacc 12853053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 7036958 - 7037133
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| |||  ||||||||||||| | ||||||||| || || |||||||||||  ||||||||||||||||||| | |||||||    
T  7036958 aaaggcttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgcc 7037057  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||  |||||||| | ||||||  |||||||| | |||| ||||||||||| ||  |||| ||||| ||||||    
T  7037058 gtttaccattttggtcatttccgtttatttttaaccttaaatatctaaggtgaatcaactttataggtgatccacc 7037133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 23179002 - 23178875
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||   ||| || |||||||||||||| ||| | |||||    
T  23179002 gcttaatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgttt 23178903  T
Q  147 actgttttggtcttctccgttagttttt 174  Q
    | | |||||||| |||||||||||||||    
T  23178902 attattttggtcatctccgttagttttt 23178875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 23590259 - 23590132
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||   ||| || |||||||||||||| ||| | |||||    
T  23590259 gcttaatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgttt 23590160  T
Q  147 actgttttggtcttctccgttagttttt 174  Q
    | | |||||||| |||||||||||||||    
T  23590159 attattttggtcatctccgttagttttt 23590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 14509226 - 14509376
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   || |||||||||| || |||||||||||  ||| |||| |||||||||||| ||||| |||||||| |||||||| ||||||||    
T  14509226 cttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgtt 14509325  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | |||||||| | ||||||||||||| |||||  |||| ||||||||||||    
T  14509326 aatttttaaccttaaatgtctaaggtaaaccaactttataggtggtccacc 14509376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 28109988 - 28109818
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||| || |||| ||| |||||||||||||| ||||||| ||||||  | |||| |||||| || ||||||||||||||||| | |||||  |||||    
T  28109988 cttaatatatgatttggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgtagttta 28109889  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  |||||||| ||||||||| |||||||| | |||||||||||||||||||  |||  ||||||||||||    
T  28109888 ccattttggtcctctccgttattttttaaccttaaatgtctaaggtgaaccaactttgtaggtggtccacc 28109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 37869164 - 37868990
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||| ||  ||| ||| ||||||||||||||  |||||| |||||| || |||||||||||  | ||||||| ||| ||||| | ||||| |    
T  37869164 aaaggcttaatatattgtttggtcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtc 37869065  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    ||||||  ||||||||||||||||| ||||||||| | ||||||||||||||| |||  |||| |||||||||||    
T  37869064 gtttacctttttggtcttctccgtttgtttttaaccttaaatgtctaaggtgagccaactttataggtggtccac 37868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 35799509 - 35799657
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    |||||||||||||||  || |||||||||||||| ||||||| ||| || ||||||||||||||  | ||||||||||| ||||| | |||| |||||||    
T  35799509 cttaatacatcatttcatcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataacttttcttccgttta 35799608  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
    |   ||||||| |||||||||| ||||||| | ||||||||||||||||    
T  35799609 cctctttggtcctctccgttagcttttaaccttaaatgtctaaggtgaa 35799657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 7983746 - 7983644
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    |||||||||||| |||| | |||| |||||||||||||| ||| | | ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  7983746 tcaatttggtcctataagtcttctaccgtttactgttttagtccttttcgtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 7983647  T
Q  216 acc 218  Q
    |||    
T  7983646 acc 7983644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 4829459 - 4829632
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||  |  |||||||||||||| ||||||||||| || || ||||||||||   | |||||||| || ||||||| || || |||    
T  4829459 aggcttaatacatcatttgattccttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgt 4829558  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||||||| |||| |||||| |||||| | |||| |||||||| |||||  |||| ||||||||||||    
T  4829559 ttactattttggtcctctctgttagtgtttaaccttaaatatctaaggtaaaccaactttataggtggtccacc 4829632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 6706920 - 6707049
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| ||||||||||||||  | |||||||||| |||||||| |||| ||||    
T  6706920 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgt 6707019  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| ||||||||  ||||||||||||||    
T  6707020 ttactattttggtcccctccgttagttttt 6707049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 10367256 - 10367405
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    ||||||||||||||  |||||| ||||||| | |||||||||||  | ||||||| ||| ||||| | |||||||||||||  |||| ||| ||||||||    
T  10367256 cttaacttatttttgattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgtt 10367355  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
     ||||||||| | |||||||||||||||||||  |||| |||||||||||    
T  10367356 tgtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccac 10367405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 14714592 - 14714659
Alignment:
Q  151 ttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccacc 14714659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 12959827 - 12959655
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||| ||| ||  ||||||||||||||  |||| | |||||| || |||| ||||||  | ||||||| |||| |||||| |||||||||    
T  12959827 aggcttaatatatcgtttggttccttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgt 12959728  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    ||||  ||||| || |||||||| || |||||| | |||||||||||||||||||  |||| |||||||||||    
T  12959727 ttacctttttgatcctctccgtttgtctttaaccttaaatgtctaaggtgaaccaactttataggtggtccac 12959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 42029079 - 42028955
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||| ||||||| ||||||| ||||||   ||||||||||||  | || |||||||||||||| | ||||| || |    
T  42029079 ggcttaatacatcatttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtcgct 42028980  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |||| ||||||||||||||||||||    
T  42028979 tactattttggtcttctccgttagt 42028955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 2581798 - 2581922
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||| |||||||||||| |||   |||||||||||| ||||||| |||| | ||||||||||||||  | ||||||||||||||||||| ||  ||||||    
T  2581798 ggctaaatacatcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgtt 2581897  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |||| | |||||| |||||||||||    
T  2581898 tactatcttggtcctctccgttagt 2581922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 26205114 - 26205180
Alignment:
Q  152 tttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  26205114 tttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccacc 26205180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 21012174 - 21012073
Alignment:
Q  73 cttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagttt 172  Q
    ||||||||| ||||||| |||| | ||||||||||||||  |||||||||||||||  |||| ||| | |||||||| |||||||| |||||||||||||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttagttt 21012075  T
Q  173 tt 174  Q
    ||    
T  21012074 tt 21012073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 37867751 - 37867844
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattct 139  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||| |||| | ||||||||||||||  | |||||||||||||| |||| ||||    
T  37867751 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttct 37867844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 42027187 - 42027312
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| ||| ||| ||||||||||||||  |||||| |||||| | ||||||| |||   | ||||||||||||||||||| |||||| ||    
T  42027187 aggcttaatacatcgtttggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgt 42027286  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    |||||  ||||||| | |||||||||    
T  42027287 ttactactttggtcctttccgttagt 42027312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 7038454 - 7038367
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||||| ||| |||||||||||||| | ||||| |||||| || |||||||||||  | |||||||||||||||||    
T  7038454 aggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 12854225 - 12854130
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgc 141  Q
    ||||||||||||  ||| ||| |||||||||||||||| ||||| |||||| || |||||||||||  | ||||||||||||||||||| ||||||    
T  12854225 ggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgc 12854130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 174
Target Start/End: Original strand, 12958410 - 12958539
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||| ||||||| || ||||||||||||||| ||||| | |||| | ||||||||||||||  | ||||||||||||||||||| |||| ||     
T  12958410 aaggcttaatatatcatttggt-tcttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttcca 12958508  T
Q  144 tttactgttttggtcttctccgttagttttt 174  Q
    ||||   |||||||| | |||||| ||||||    
T  12958509 tttatcattttggtcatttccgtttgttttt 12958539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 41796071 - 41795989
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccat 130  Q
    ||||||||||||||||||| ||||||||||||||  |||||| |||| | ||||||||||||||  | |||||||||||||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccat 41795989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 7490246 - 7490165
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaac 197  Q
    ||||||||||||||||||| || |   ||||||| |||||||||| |||||||||||||||| | |||||||||||||||||    
T  7490246 tcaatttggtcccataaatcttttattgtttactattttggtcttatccgttagtttttaaccttaaatgtctaaggtgaac 7490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 10368503 - 10368378
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||| ||| ||||| ||||||||  |||||| |||| | ||||||||||||||  | |||||||| |||||||||| |||| |||||||     
T  10368503 ttaatacatcatttggtcccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgtttat 10368404  T
Q  149 tgttttggtcttctccgttagttttt 174  Q
      |||||||| | |||||| ||||||    
T  10368403 cattttggtcatgtccgtttgttttt 10368378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 32614379 - 32614532
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||||||| ||| |||| ||||||||   |||||| |||||| |||||||||| | |  ||||||||| || |||||| | || || |||    
T  32614379 aggcttaatatatcatttggtcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgt 32614478  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacc 198  Q
    ||||  |||| ||| |||||||| ||||||||| | | ||||||||||||||||    
T  32614479 ttaccattttagtcctctccgtttgtttttaaccttatatgtctaaggtgaacc 32614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 42246585 - 42246714
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||| ||||| ||||||| |||| | |||||| |||||||  |||||||||| |||||||| | || | ||||    
T  42246585 aggcttaatacatgctttggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgt 42246684  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| |||||||| | | |||||||||||    
T  42246685 ttactattttggtccttttcgttagttttt 42246714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 34039258 - 34039382
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||| |||||||||| |||||||||||||||  ||| || |||| ||| |||||||||||| || | ||||||||| ||||| | ||| | || |    
T  34039258 ggcttaatatatcatttagtttcttaacttattttttatttccattttgcttctctaactataaagtatcttaatttggtctcataattcttcggtcgct 34039357  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    | || |||||||||||||| |||||    
T  34039358 tgctattttggtcttctccattagt 34039382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 45047453 - 45047509
Alignment:
Q  162 tccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  45047453 tccgttaatttttaatatcaaatgtctaaggtgaaccatatttaaaggtggtccacc 45047509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 4512206 - 4512273
Alignment:
Q  151 ttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||||| || ||| ||||||||||    
T  4512206 ttttggtcctctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccacc 4512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 1625074 - 1624969
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||| | ||||| |||| | | ||||||||||||  | |||||||||||| |||||| || |||| |||||| |||||||||||||||||    
T  1625074 cttaacttatttttggatttcattttgat-ctctaactataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgtt 1624976  T
Q  168 agttttt 174  Q
    | |||||    
T  1624975 aattttt 1624969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 3532259 - 3532361
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    ||||||||||| ||||| | || || | |||||| |||| ||| |||| |||  |||||||||| |||||| ||||||||||||| ||||||||||||||    
T  3532259 tcaatttggtcacataagtcttttgtcatttactattttagtcatctctgttgatttttaacattaaatgtttaaggtgaaccatatttaaaggtggtcc 3532358  T
Q  216 acc 218  Q
    |||    
T  3532359 acc 3532361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 2305536 - 2305661
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||  |||  || |||||||||||||| | ||||| |||| | ||||||||||||||  | ||||||||||||| ||  | ||||||||||     
T  2305536 gcttaatacatgctttgatcccttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgtta 2305635  T
Q  147 actgttttggtcttctccgttagttt 172  Q
     || |||||||| |||||||||||||    
T  2305636 cctcttttggtcctctccgttagttt 2305661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 11386642 - 11386747
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||||||||| | |||||| || |||||||||||  |||||||||| |||||||||  |||| ||||||||  ||||||| || || |||     
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggttttatctgttt 11386741  T
Q  169 gttttt 174  Q
    ||||||    
T  11386742 gttttt 11386747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 218
Target Start/End: Complemental strand, 25570992 - 25570819
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| ||  ||| |||||||||||||   || ||| | | || || ||||||| |||  |||||||||| | |||||| | |||  || |    
T  25570992 aggcttaatacatccttcggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtttcaatttgattccataagtcttcctccat 25570893  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||| ||| | |||||||||||||||  | |||||||||||||||||||  |||| ||||||||||||    
T  25570892 ttactattttagtcctttccgttagtttttaaacttaaatgtctaaggtgaaccaactttataggtggtccacc 25570819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 41296520 - 41296403
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccat 200  Q
    |||||| ||| | ||||||||||||||| ||  | || || ||||  || |||||||| ||||||||||||||||||| ||||||||||| ||||| |||    
T  41296520 taactaaaaaacgtttcaatttggtcccttatgttttttgtcgttatctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaatcat 41296421  T
Q  201 gtttaaaggtggtccacc 218  Q
     || ||||||||| ||||    
T  41296420 attaaaaggtggtgcacc 41296403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 40174817 - 40174757
Alignment:
Q  114 tttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagttttt 174  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||| |||||||||||||||    
T  40174817 tttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttt 40174757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 11575579 - 11575512
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaa 110  Q
    |||||||||||||||||||| |||  ||||||||||||| ||||| | |||||| |||||||||||||    
T  11575579 aaaggcttaatacatcatttggtccattaacttatttttggttttaattttggtcccctaactataaa 11575512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 21010514 - 21010451
Alignment:
Q  151 ttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtc 214  Q
    |||||||| |||| ||||||| |||||||||||||||||| ||||||| | |||||||||||||    
T  21010514 ttttggtcctctctgttagttgttaacatcaaatgtctaatgtgaaccgtatttaaaggtggtc 21010451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 42368428 - 42368343
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||| |||| ||| |||||||||||||| | ||||| |||||| ||||||||||||||  | || ||||||||||||||    
T  42368428 ggcttaatacatgatttggtc-cttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 6209162 - 6209058
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| | ||||| ||||||   ||||||||||||  | | ||||||||||||||| | || || |||||||| |||||||||||| |||||    
T  6209162 ttaacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataattctt-tgtcgtttactattttggtcttcttcgtta 6209064  T
Q  169 gttttt 174  Q
    ||||||    
T  6209063 gttttt 6209058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 15650439 - 15650560
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||| |||  || ||||||||||||||  || | | |||||| ||||||||||||||  | ||||||||||  | ||||| || || |||||||    
T  15650439 ttaatacatcgtttgatcccttaacttatttttcattgttaatttggtcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtttac 15650538  T
Q  149 tgttttggtcttctccgttagt 170  Q
    | |||||||| |||||||||||    
T  15650539 tattttggtcatctccgttagt 15650560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 15850725 - 15850608
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccat 200  Q
    ||||||||||   ||||||||||||| ||||| | |||||| |||  || ||||||||  || ||||||||||||||   |||||||||||||||||||     
T  15850725 taactataaaatgtttcaatttggtctcataactcttctgctgttacctattttggtccacttcgttagtttttaaccctaaatgtctaaggtgaaccaa 15850626  T
Q  201 gtttaaaggtggtccacc 218  Q
      ||| ||||||||||||    
T  15850625 cattataggtggtccacc 15850608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 3528278 - 3528214
Alignment:
Q  154 tggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||||  ||||||||||| | |||| |||||||||||||||| |||||||||||| ||||    
T  3528278 tggtcttctctattagtttttaatagcaaaagtctaaggtgaaccatatttaaaggtggttcacc 3528214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 14482213 - 14482129
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccca 129  Q
    |||||||||||||  ||| ||| ||||||||||||||   ||||| ||||||||| ||||| |||||| | ||||||||||||||    
T  14482213 aggcttaatacatgctttggtcccttaacttatttttgaatttcattttggttccttaactttaaagcgtctcaatttggtccca 14482129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 2306781 - 2306651
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| |||||||| |||||  | ||||||||||||  ||  | ||||||||||    
T  2306781 ggcttaatacatgctttggtcccttaacttattttg-gatttcattttggtcccctaactgtaaagtgtctcaatttggtccattatgtcttctgccgtt 2306683  T
Q  146 tactgttttggtcttctccgttagtttttaac 177  Q
      || |||||||| ||||||||||||| ||||    
T  2306682 acctcttttggtcctctccgttagtttgtaac 2306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 3665218 - 3665345
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| | |||||||||||   ||||||||||||||| ||  | |||||||||    
T  3665218 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtcccttatgtcttctgccgt 3665317  T
Q  145 ttactgttttggtcttctccgttagttt 172  Q
    |  || ||||| || ||||| |||||||    
T  3665318 tacctcttttgatcatctccattagttt 3665345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 2583669 - 2583579
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaat 134  Q
    ||||||||||||||| ||| |||   |||||||||||| ||||| | ||| || ||||||||||||||  | ||||||||||| |||||||    
T  2583669 aaggcttaatacatcgtttggtcctctaacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaat 2583579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 42596555 - 42596636
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    ||||||||||||||||| ||| |||||||||||||   |||| | |||||| |||||||||| || | | ||||||||||||    
T  42596555 ggcttaatacatcatttggtcccttaacttattttcgttttttattttggtcccctaactattaaacgtctcaatttggtcc 42596636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 27264696 - 27264608
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||||||||||||||||||   ||||| |||||| || ||||| ||||   | |||||||||||||||||    
T  27264696 aaggcttaatacatgctttggtctcttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 27264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 42249909 - 42249750
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataa------agcatttcaatttggtcccataaatattct 139  Q
    ||||||||||||  ||| |||  ||||||||||||| ||||||| |||| | |||||| |||||      ||  | ||||||| |||| |||| | ||||    
T  42249909 ggcttaatacatgctttggtcctttaacttattttttgttttcattttgatcccctaattataattataaagtgtctcaatttagtcctataactcttct 42249810  T
Q  140 gccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
     ||||||||  || |||||| ||| |||| |||||||| | |||||||||||||||||||    
T  42249809 accgtttacaattgtggtctcctctgttattttttaaccttaaatgtctaaggtgaacca 42249750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 3254850 - 3254933
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||  ||| ||| |||||||||||||  | ||||| ||||||||||||| |||| ||  | |||||||||||||    
T  3254850 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtccc 3254933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 3255997 - 3255919
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtc 126  Q
    |||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  |||||||||||||    
T  3255997 gcttaatacatgcttt-gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtc 3255919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 4701606 - 4701543
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    ||||||| ||||||| ||| ||||| ||||||||  ||||||||||| | ||||||||||||||    
T  4701606 cttaatatatcatttggtcccttaatttatttttgattttcactttgatcccctaactataaag 4701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 8537077 - 8537152
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaag 191  Q
    |||| |||||||| ||  ||||||| ||||  || |||||||| |||||||||||||||||| | |||||||||||    
T  8537077 tcaaattggtcccttatgtattctgtcgttatctattttggtcatctccgttagtttttaaccttaaatgtctaag 8537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 41312494 - 41312621
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| |||  ||||||||||||  | ||||| |||| | | |||||||||||| || ||||||||||| | ||  | || ||||||    
T  41312494 aggcttaatacatgctttggtccattaacttattttcggatttcattttgttcctctaactataaagtatctcaatttggtctcttatgtcttatgccgt 41312593  T
Q  145 ttactgttttggtcttctccgttagttt 172  Q
    |  || |||||||| |||||||||||||    
T  41312594 tacctcttttggtcctctccgttagttt 41312621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 4630183 - 4630125
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtc 126  Q
    ||||||||||||| || ||||| |||||| ||||||||||||||  | |||||||||||    
T  4630183 cttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtc 4630125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 33837877 - 33837811
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    |||||||||||||  ||| ||| ||||||||||||| || ||| | |||||| ||||||||||||||    
T  33837877 aggcttaatacatgttttggtcccttaacttattttcagattttattttggtcccctaactataaag 33837811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 3666391 - 3666307
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||| || |||| ||| |||||||||||||  | ||||| |||||| || |||||||||||  | |||||||||||||    
T  3666391 aaaggcttaata-ataatttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtccc 3666307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 5564051 - 5564136
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||| |||||||  | |||||||||||||    
T  5564051 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccc 5564136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 14573929 - 14573864
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    ||||||||||||  ||| ||| |||||| ||||||| | ||||| |||||| ||||||||||||||    
T  14573929 ggcttaatacatgctttggtcccttaacatatttttggatttcattttggtcccctaactataaag 14573864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 17858708 - 17858619
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||| |||||||| |||| ||| ||||||||||||||   ||||| |||| | || ||||| |||| | | |||||||||||||||||    
T  17858708 aaaggcctaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 17858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 35801111 - 35801038
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagttttt 174  Q
    |||||||||||  ||||||||||||||| ||| | ||||||| |||||   ||||||| ||||||||| |||||    
T  35801111 taactataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaattttt 35801038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 41295099 - 41295228
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| |||  ||||||||||||| | ||||| ||| || |||||| || ||| | | |||| |||||||| || ||||||| ||||    
T  41295099 aggcttaatacatgctttggtcatttaacttatttttggatttcattttcgtcccctaattaaaaaacgtctcaaattggtcccttatatattctaccgt 41295198  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    |  || |||||||| || | ||||||||||    
T  41295199 tatctattttggtcatcgcagttagttttt 41295228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 15816789 - 15816701
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||||||||||||||||||   ||||| ||| || || ||||| ||||   | |||||||||||||||||    
T  15816789 aaggcttaatacatgttttggtctcttaacttatttttgaatttcattttcgtcccttaactttaaactgtctcaatttggtcccataa 15816701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 27262706 - 27262794
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||| || |||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  27262706 aaggcttaatacatgctttggtccctcaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 27262794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 43015532 - 43015620
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| ||||   | |||||||||||||||||    
T  43015532 aaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 43015620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 45 - 218
Target Start/End: Complemental strand, 750 - 577
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||| |||||||||| ||||||||||||||  | ||||||| ||||||||||| |||||||||    
T  750 aggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgt 651  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  |||||||| |||||||||||||||||||| |||  ||||||||||||||| ||||||| |||| ||||    
T  650 ttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcacc 577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 524 - 697
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||| |||||||||| ||||||||||||||  | ||||||| ||||||||||| |||||||||    
T  524 aggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgt 623  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  |||||||| |||||||||||||||||||| |||  ||||||||||||||| ||||||| |||| ||||    
T  624 ttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcacc 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 45 - 218
Target Start/End: Complemental strand, 9600 - 9427
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||| |||||||||| ||||||||||||||  | ||||||| ||||||||||| |||||||||    
T  9600 aggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgt 9501  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  |||||||| |||||||||||||||||||| |||  ||||||||||||||| ||||||| |||| ||||    
T  9500 ttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcacc 9427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 8371 - 8502
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||| |||||||| ||| |||||||||||||| |||||||||||| | |||||||||||||   | |||| |||||||||||||| ||| | |    
T  8371 aaaggcttaatccatcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtc 8470  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
     |||||| ||| |||| |||||||||||||||    
T  8471 atttactatttcggtcatctccgttagttttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 21276989 - 21277161
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||| |||| ||| |||||||||||||| ||||||| ||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||    
T  21276989 ggcttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtt 21277088  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||| ||||| || ||||| ||||||||| || | |||||||||||||||||||  |||| ||||||||||||    
T  21277089 tactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtccacc 21277161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 52743097 - 52742925
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||| |||||||||  ||||||||||||| ||||||||||||||  | |||| |||||||| ||  | || || ||||    
T  52743097 ggcttaatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtt 52742998  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  52742997 tactgttatggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggtacacc 52742925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 9633773 - 9633942
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    ||||||||| |||| |||  ||||||||||||| ||||||| |||||| || |||||||||||  | ||||||||||   |||||| |||  ||||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttac 9633872  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
     |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9633873 agttttgatcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 9633942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 26056266 - 26056096
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||  ||| ||| |||||||||||||| | ||||| |||||| ||||||||||||||  | ||||||||||||||||||| || || ||||||    
T  26056266 cttaatacatactttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgttta 26056167  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    || |||||||| |||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| ||||    
T  26056166 ctattttggtcctctccgttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggttcacc 26056096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 44977216 - 44977388
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||| |||| ||| |||||||||||||| |||||||||||||| ||||||||||||||  | | ||  ||||||| ||  | ||||||||||    
T  44977216 ggcttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgccgtt 44977315  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      ||  ||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44977316 acctcatttggtcatctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccacc 44977388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 49141617 - 49141445
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||| ||| |||  |||| |||||||| |||||||||| | | || ||||||| |||  |||||| |||||||||||| | ||||||||||    
T  49141617 ggcttaatacatcgtttggtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgccgtt 49141518  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||  |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  49141517 taccattttagtcatctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaagttgttccacc 49141445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 47560133 - 47560262
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||| ||||||||   ||||||||||||| ||||||||||||||  |||||||||| |||  |||||||||||||||    
T  47560133 aggcttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgt 47560232  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    |||||||||||||| ||||||||| |||||    
T  47560233 ttactgttttggtcatctccgttaattttt 47560262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 13641249 - 13641380
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| |||||||||  |||  || |||||||||||||| |||||||||||||| ||||||||||||||  | ||||||||||||||||||| |||||||    
T  13641249 aaaggtttaatacatgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgcc 13641348  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| |||||||| ||||||||| |||||    
T  13641349 gtttactattttggtcatctccgttatttttt 13641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 25787287 - 25787161
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  | ||||||||||| ||||||| || ||||     
T  25787287 aaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgcca 25787188  T
Q  144 tttactgttttggtcttctccgttagt 170  Q
    |||||| |||||||| |||||||||||    
T  25787187 tttactattttggtcctctccgttagt 25787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 14071326 - 14071181
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||| ||| ||||| |||||||| ||||||| |||||| | ||||||||||||  | ||||||||||||||||| | ||||| ||    
T  14071326 aaggcttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcg 14071227  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtcta 189  Q
    |||||  |||||||| | |||||| ||||||||| | |||||||||    
T  14071226 tttaccattttggtcctttccgtttgtttttaaccttaaatgtcta 14071181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 25785962 - 25786087
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||||||||| || || |||    
T  25785962 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgt 25786061  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||| | |||||||| |||| ||||||    
T  25786062 ttattattttggtcctctctgttagt 25786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 47411569 - 47411445
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||  |||||||||||||||||||||  | ||||||||||||||||||| || |||||||    
T  47411569 ggcttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatcttatgccgtt 47411470  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |||| ||||| |  |||||||||||    
T  47411469 tactattttgattctctccgttagt 47411445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 218
Target Start/End: Complemental strand, 23082250 - 23082075
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||||||||||||||||  |||| ||| || |  ||||||   |||| || |||||| ||| | ||||||||||||||| || || ||||| |    
T  23082250 aaaggcttaatacatcatttagtcctttaatttaattctttttttcaaaatggtcccttaactaaaaaacgtttcaatttggtcccttatattttctgtc 23082151  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||  || |||||||| | ||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||    
T  23082150 gttgcctcttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccacc 23082075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 36509828 - 36509954
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   || ||| |||||| || |||||||||||  |||||||||||| |||||||| |||||||||||||| |||||||  ||||||||    
T  36509828 cttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgtt 36509927  T
Q  168 agtttttaacatcaaatgtctaaggtg 194  Q
    |||||||||| ||||||||||| ||||    
T  36509928 agtttttaacctcaaatgtctatggtg 36509954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 16218600 - 16218475
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||  | || | |||||||||||||| || ||||||||||||||||||| || || |||    
T  16218600 aggcttaatagatcatttagtcccttaatttatttttagttttctatctgatcccctaactataaagtatctcaatttggtcccataaatcttatgtcgt 16218501  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||| | |||||||| |||||||||||    
T  16218500 ttaatattttggtcatctccgttagt 16218475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 218
Target Start/End: Complemental strand, 30551711 - 30551538
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||||||| ||||| ||| || |  ||||||   |||| || |||||| ||| ||||||||||||||||| ||  | ||||  |||    
T  30551711 aggcttaatacatcatttagtcccttaatttaattctttttttcaaaatggtcccttaactaaaaaacatttcaatttggtcccttatgttttctatcgt 30551612  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  || |||||||| |||||||||||||||| |||||||||||||| ||||||||| || ||||||||| ||||    
T  30551611 tacctcttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggtgcacc 30551538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 3979435 - 3979311
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||| |||||| |||| ||| |||||||||||||| | ||||| |||||| || |||||||||||  | ||||||||||||||||| | |||||||||    
T  3979435 aggcttgatacattatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgt 3979336  T
Q  145 ttactgttttggtcttctccgttag 169  Q
    ||||| |||||||| ||||||||||    
T  3979335 ttactattttggtcctctccgttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 49139793 - 49139924
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| |||||||||||||| ||| |||||||||||||| ||||||  |||||| || |||||||||||  | ||||||||||| ||||||| ||| ||     
T  49139793 aaaggtttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgca 49139892  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| |||||||  |||||||||||||||    
T  49139893 gtttactattttggtaatctccgttagttttt 49139924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 13930791 - 13930653
Alignment:
Q  51 aatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactg 150  Q
    |||||||||||| ||| |||||||||||||| ||||||| |||||| | ||||||||||||  | ||||||||||||||||| | || || |||||||      
T  13930791 aatacatcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttacca 13930692  T
Q  151 ttttggtcttctccgttagtttttaacatcaaatgtcta 189  Q
    |||||||| | |||||| ||||||||| | |||||||||    
T  13930691 ttttggtcctttccgtttgtttttaaccttaaatgtcta 13930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 26054892 - 26055020
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| || ||||||||||| | ||||| |||||| ||||||||||||||  |||||||||||| |||||||| ||||| |||    
T  26054892 aggcttaatacatgctttggtccct-aacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgt 26054990  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| ||||||||| || |||||||||||    
T  26054991 ttactattttggtctccttcgttagttttt 26055020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 47136809 - 47136684
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||  ||  ||||||||||||| ||||||| || ||| ||||||||||||||  | ||||||||||  ||||||| || ||||||    
T  47136809 aggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgt 47136710  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||||| |||||||| |||||||||||    
T  47136709 ttactattttggtcctctccgttagt 47136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 51726910 - 51726793
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccat 200  Q
    |||||||||||  | |||||||||| |||||||| ||||| |||||||| |||| ||| || ||||||||||||||| | |||||||||||||||||||     
T  51726910 taactataaagtgtctcaatttggttccataaatcttctgtcgtttactattttagtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaa 51726811  T
Q  201 gtttaaaggtggtccacc 218  Q
     |||| ||||||||||||    
T  51726810 ctttataggtggtccacc 51726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 14764296 - 14764396
Alignment:
Q  118 aatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    ||||||||| ||||| | ||||| ||||||||||||| ||| |||| ||||||||||||||| |||||| ||||||||||| | ||||||||||||||||    
T  14764296 aatttggtctcataagtcttctgtcgtttactgttttagtcatctctgttagtttttaacattaaatgtttaaggtgaaccttatttaaaggtggtccac 14764395  T
Q  218 c 218  Q
    |    
T  14764396 c 14764396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 218
Target Start/End: Complemental strand, 22766945 - 22766769
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttattt-ttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgc 141  Q
    |||||||||||||||||||||||| ||||| ||| || ||  ||||||   |||| || |||||| ||| | |||||||||| |||| ||  | |||||     
T  22766945 aaaggcttaatacatcatttagtcccttaatttaattcttttttttcaaaatggtcccttaactaaaaaacgtttcaatttgatcccttatgttttctgt 22766846  T
Q  142 cgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  || |||||||| | ||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||    
T  22766845 cgttgcctcttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccacc 22766769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 50678358 - 50678530
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||||||| |||| ||| ||||||||||||||   ||||| |||| | || ||||||||||   | |||||||||  || ||||| | |||||    
T  50678358 aaaggcttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttgg--ccttaaatct-ctgcc 50678454  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||  || |||||||| |||| |||||||||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  50678455 gttacctcttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcacc 50678530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 14169631 - 14169786
Alignment:
Q  63 agtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttct 162  Q
    |||| |||||||||||||   || ||| |||||| |  ||||||||||   | ||||||||||||||||||| || || |||||||| |||||||||| |    
T  14169631 agtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttat 14169730  T
Q  163 ccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | ||||||||||||| | |||||||||||||||||||  |||| |||||| |||||    
T  14169731 ctgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggcccacc 14169786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 48467263 - 48467377
Alignment:
Q  53 tacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgtt 152  Q
    |||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||||  ||||||||||||| | ||||| || || |  ||||||||    
T  48467263 tacatcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatcttatgtc-attactgtt 48467361  T
Q  153 ttggtcttctccgtta 168  Q
    |||||| |||||||||    
T  48467362 ttggtcatctccgtta 48467377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 218
Target Start/End: Complemental strand, 51219089 - 51218915
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||| |||| || ||||||||| || |  || |||   |||| ||||||||| ||| | | |||| |||||||| ||  | |||| |||    
T  51219089 aaggcttaatacatcgtttactcccttaacttaattctttttctcaaaatggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttccg 51218990  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    || |||   |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  51218989 ttaactcaattggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccacc 51218915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 194
Target Start/End: Complemental strand, 13642679 - 13642530
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| |||  ||||||||||||| ||||||| |||||| | |||| | |||||  | ||| |||| |||||||| |||||||||||    
T  13642679 aggcttaatacatgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgt 13642580  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtg 194  Q
    |||   |||||||||  |||||||||||||||| | ||||||||||||||    
T  13642579 ttataattttggtctcttccgttagtttttaaccttaaatgtctaaggtg 13642530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 37624691 - 37624527
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||||||| ||||| ||| || |  ||||||   |||| || |||||| ||| | ||||||||||||||  ||  | ||||| ||||    
T  37624691 ggcttaatacatcatttagtcccttaatttaattatttttttcaaaatggtcccttaactaaaaaacgtttcaatttggtccgttatgttttctgtcgtt 37624592  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggt 210  Q
       | |||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  37624591 acatcttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaaggt 37624527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 3978038 - 3978161
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| ||||||||||||||   ||||| |||||| |  |||||||||||  | |||||||| |||||||| | ||||| |||    
T  3978038 aggcttaatacatcatttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgt 3978137  T
Q  145 ttactgttttggtcttctccgtta 168  Q
    ||||| |||||||| |||||||||    
T  3978138 ttactattttggtcctctccgtta 3978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 13929292 - 13929391
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| |||||| || |||||||||||  | ||||||||||||| ||||| |||| |||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgttta 13929391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 47410980 - 47411103
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    ||||||||||| |||| ||| ||||| ||||||||  |||||| |||| | ||||||||||||||  | ||||||||||| ||||||| || || |||||    
T  47410980 gcttaatacataatttggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgttt 47411079  T
Q  147 actgttttggtcttctccgttagt 170  Q
    ||| |||||||| |||||||||||    
T  47411080 actattttggtcatctccgttagt 47411103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 27689346 - 27689448
Alignment:
Q  114 tttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggt 213  Q
    ||||||||||||| | ||  | ||||| ||||  || |||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  27689346 tttcaatttggtctcttatgttttctgtcgttacctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggt 27689445  T
Q  214 cca 216  Q
    |||    
T  27689446 cca 27689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 19466271 - 19466178
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtg 194  Q
    |||||||||||  | ||||||||||||||||||| ||||| |||||||| || ||||  |||||||||||||||||| ||||||||||| ||||    
T  19466271 taactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagtttttaacctcaaatgtctatggtg 19466178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 50679939 - 50679814
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||  ||| ||| |||||||||||||||||||| | |||||| || |||||||||||  | ||||||||||||||||| | |||  ||||||||    
T  50679939 ttaatacatgctttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttac 50679840  T
Q  149 tgttttggtcttctccgttagttttt 174  Q
    |  | ||||| |||||||||||||||    
T  50679839 taatatggtcctctccgttagttttt 50679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 36511453 - 36511325
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||    |||| ||||| |||||||   || ||| |||||| || |||||||||||  | ||||||||||||||||||| ||||| |||    
T  36511453 aggcttaatacatcccccagtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgt 36511354  T
Q  145 ttactgttttggtcttctccgttagtttt 173  Q
    ||||| |||||||| ||||||||||||||    
T  36511353 ttactattttggtcatctccgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 8092663 - 8092765
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    |||||||||| |||||||| |||  |||||||||| ||||||| | ||||||||| |||||| | |||| ||||||||||||||  |||| |||||||||    
T  8092663 tcaatttggttccataaatcttcctccgtttactgatttggtcctttccgttagtatttaaccttaaatatctaaggtgaaccaactttataggtggtcc 8092762  T
Q  216 acc 218  Q
    |||    
T  8092763 acc 8092765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 22167772 - 22167905
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    |||||||||||||||   || || ||||||||||||| | || ||| ||| || || ||| ||| |||  ||||||||||||||||||||| ||||||||    
T  22167772 aaggcttaatacatcccctaatcccttaacttattttaatttctcagtttagtcccttaaatattaagtgtttcaatttggtcccataaatcttctgccg 22167871  T
Q  144 tttactgttttggtcttctccgttagtttttaac 177  Q
    |||| | |||||||  |||| |||||||||||||    
T  22167872 tttattattttggttctctctgttagtttttaac 22167905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 44979427 - 44979495
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||||||||  | |||||||||||    
T  44979427 aaaggcttaatacatcatttaatcccttaacttattttttgttttcactttggtctcttaactataaag 44979495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 48935233 - 48935105
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||| ||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | ||||||||    
T  48935233 aaggcttaatatatgctttcgtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccg 48935134  T
Q  144 tttactgttttggtcttctccgttagttt 172  Q
    ||  || |||||||| |||||||||||||    
T  48935133 ttacctcttttggtcatctccgttagttt 48935105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 49618423 - 49618487
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||| |||||| ||||||||||    
T  49618423 aaaggcttaataaatcattcagtctcttaacttattttcagttttcattttggtcccctaactat 49618487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 14390252 - 14390379
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| | |||||||||||   | |||||||||| |||||||| ||||  |||    
T  14390252 aggcttaatacatgctttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgt 14390351  T
Q  145 ttactgttttggtcttctccgttagttt 172  Q
    ||||  |||||||| |||||||||||||    
T  14390352 ttaccattttggtcctctccgttagttt 14390379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 35683050 - 35683181
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | ||||||||||    
T  35683050 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgtt 35683149  T
Q  146 tactgttttggtcttctccgttagtttttaac 177  Q
      || |||||||| |||||||||  |||||||    
T  35683150 acctcttttggtcctctccgttacattttaac 35683181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 9592271 - 9592361
Alignment:
Q  84 ttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagttttt 174  Q
    ||||||||||||| ||||||||||||||  |||||||||| |||||||||| || || |||||||| ||||| || | ||||||| |||||    
T  9592271 ttttcactttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttt 9592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 19464619 - 19464721
Alignment:
Q  70 taacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttag 169  Q
    |||||||||||   |||||| |||||| || ||| |||||||  |||||||||||| ||| |||| |||||||||||||| |||||||| ||||| ||||    
T  19464619 taacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatctccattag 19464718  T
Q  170 ttt 172  Q
    |||    
T  19464719 ttt 19464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 2971691 - 2971780
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaactta-tttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||||||||||  ||||||||| |||||  |||||||||| || | ||||||||||||  | |||||||||||||||||    
T  2971691 aaggcttaatacatcatttagttccttaacttatttttttattttcactttagtcctctaactataaagtgtctcaatttggtcccataa 2971780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 33793774 - 33793839
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    |||||||||||||||||  || |||||||||||||| |||||||||||||| |||||| |||||||    
T  33793774 ggcttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaattataaag 33793839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 52181429 - 52181304
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||| || |||| |||  |||||||||||||  |||||| |||||| | ||||||||||||  | ||||||| ||| ||||||| || ||      
T  52181429 aaaggcttaatagataatttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgtt 52181330  T
Q  143 gtttactgttttggtcttctccgtta 168  Q
    ||||||| |||||||| |||||||||    
T  52181329 gtttactattttggtcatctccgtta 52181304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 2238100 - 2237973
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| || |||||||||||  | ||||||||||||| ||  | ||||| |||    
T  2238100 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgt 2238001  T
Q  145 ttactgttttggtcttctccgttagttt 172  Q
    |  || |||||||| |||||||||||||    
T  2238000 tacctcttttggtcctctccgttagttt 2237973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 34653430 - 34653513
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccca 129  Q
    |||| |||||||||||| ||| |||||||||||||  |||||||||||||| || |||||||||||  | |||||||| |||||    
T  34653430 ggctcaatacatcatttggtcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaatttgatccca 34653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 52741480 - 52741611
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||| ||||||| ||||||| ||| |||||||||||||| ||||| | |||||| | ||||||||||||  | |||| ||| |||| ||  | ||||| |    
T  52741480 aaagacttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatcccttatgtcttctgtc 52741579  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
     |||| |||||||||| ||||| |||||||||    
T  52741580 atttattgttttggtcctctccattagttttt 52741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 49619941 - 49619879
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||||| |||||| ||||||||||    
T  49619941 aggcttaatacatcatttggtcccttaatttattttcagttttcaatttggtcccctaactat 49619879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 2236806 - 2236939
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | ||||| ||    
T  2236806 aaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcg 2236905  T
Q  144 tttactgttttggtcttctccgttagtttttaac 177  Q
    ||  || ||||| || |||||||||  |||||||    
T  2236906 ttacctcttttgatcctctccgttacattttaac 2236939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 38451547 - 38451608
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||| |||||| ||||||||||    
T  38451547 ggcttaatacatcatttggtcccttaacttattttatgttttcaatttggtcccctaactat 38451608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 16217435 - 16217559
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||| ||||  |  |||||||||||||| ||||| | |||| |   ||||||||||||  | |||||||||||| |||||| || || | ||    
T  16217435 ggcttaatacataatttgattccttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatcttatgtcatt 16217534  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |||| |||||||| |||||||||||    
T  16217535 tactattttggtcatctccgttagt 16217559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 2973107 - 2972976
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||| ||||||| ||| || || ||| |||||||  | |||||||||||| |||| | ||   |||||||||  | ||||| | || |||    
T  2973107 cttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttactagtgtggtcctttctgtt 2973008  T
Q  168 agtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||||||||| | |||||||||||||| ||||    
T  2973007 agtttttaactttaaatgtctaaggtgtacca 2972976  T

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Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 14765192 - 14765085
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||   || ||| |||||| || ||||||| |||  | ||||||||||||||||||| || ||| ||||||| ||| |||| |||||||||    
T  14765192 ttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaattttttgcagtttactatttcggtcctctccgtta 14765093  T
Q  169 gtttttaa 176  Q
    || |||||    
T  14765092 gtatttaa 14765085  T

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Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 48974528 - 48974445
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||  ||| ||| |||||||||||||  | ||||| |||||||||||||||||||||  | |||| ||||||||    
T  48974528 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtccc 48974445  T

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Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 49141393 - 49141346
Alignment:
Q  253 aaaaagagaaccgttggatcatataagtatgttgtatcttacgataaa 300  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  49141393 aaaaagagaacagttggatcatataagtctgttgtatcttacgctaaa 49141346  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 1061578 - 1061508
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    |||||||||||||||||  |||  ||||||||||||||||| | ||||| ||| || ||||||||||||||    
T  1061578 agaaaggcttaatacatgctttgctctcttaacttatttttggatttcattttagtcccctaactataaag 1061508  T

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Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 48934236 - 48934318
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  |||| || |||||||||||||  | ||||| |||||| ||||||||||||||  | |||||||||||||    
T  48934236 ggcttaatacatgttttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48934318  T

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Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 20953282 - 20953371
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaat 134  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||| ||| ||||  |||||||||||  | |||||||||||| ||||||    
T  20953282 aggcttaatacatgctttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataaat 20953371  T

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Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 25866796 - 25866707
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  25866796 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 25866707  T

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Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 38451829 - 38451768
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||| ||||||  |||||||||    
T  38451829 ggcttaatacatcatttggtcatttaacttattttttgttttcaatttggtatcctaactat 38451768  T

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Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 40811260 - 40811321
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaac 177  Q
    |||||||| |||||||| | || ||||||||| | |||||||| ||||||||||||||||||    
T  40811260 tcaatttgatcccataactcttttgccgtttattattttggtcatctccgttagtttttaac 40811321  T

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Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 52439406 - 52439345
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||| |||||| | ||||||||    
T  52439406 ggcttaatacatcatttggtcccttaacttattttctgttttcaatttggtcctctaactat 52439345  T

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Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 40109426 - 40109506
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
    ||||||||||||||||||| |||  |||||||||  | ||||| | || ||||||||||||  | ||||||||||||||||    
T  40109426 tcaatttggtcccataaatcttcatccgtttactaatgtggtcctttctgttagtttttaatcttaaatgtctaaggtgaa 40109506  T

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Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 14312769 - 14312852
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||| |||| ||| |||||||||||||| | ||| | ||||||  |||| ||||||||  | |||||||||||||    
T  14312769 aggcttaatacatgatttggtcccttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtccc 14312852  T

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Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 42248401 - 42248298
Alignment:
Q  71 aacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagt 170  Q
    ||||||||||| | ||||| |||||| || |||||||||||  | |||||||||||| |||||| || || |||||||  |||| ||| ||| ||||||     
T  42248401 aacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgttaga 42248302  T
Q  171 tttt 174  Q
    ||||    
T  42248301 tttt 42248298  T

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Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 51760033 - 51760120
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  51760033 aggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 51760120  T

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Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 1061323 - 1061405
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  ||| ||| ||||||||||||| || ||| | |||||| ||| ||||||||||  | |||||||||||||    
T  1061323 ggcttaatacatgctttggtcgcttaacttattttcagattttattttggtccccaaactataaagtgtctcaatttggtccc 1061405  T

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Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 25035349 - 25035455
Alignment:
Q  42 gaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgc 141  Q
    |||||| |||||||||  ||| ||| ||||||||||||||   ||||| |||||| |||||||| ||||   | ||||||||||||| ||| ||| || |    
T  25035349 gaaaggtttaatacatgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtcccctaagtatacttc 25035448  T
Q  142 cgtttac 148  Q
    |||||||    
T  25035449 cgtttac 25035455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 25040562 - 25040668
Alignment:
Q  42 gaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgc 141  Q
    |||||| |||||||||  ||| ||| ||||||||||||||   ||||| |||||| |||||||| ||||   | ||||||||||||| ||| ||| || |    
T  25040562 gaaaggtttaatacatgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtcccctaagtatacttc 25040661  T
Q  142 cgtttac 148  Q
    |||||||    
T  25040662 cgtttac 25040668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 38458077 - 38458183
Alignment:
Q  42 gaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgc 141  Q
    |||||| |||||||||  ||| ||| |||||||||||||| | ||||| |||||| |||||||| ||||   | |||||||| |||| ||| ||| || |    
T  38458077 gaaaggtttaatacatgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttgatcccctaagtatacttc 38458176  T
Q  142 cgtttac 148  Q
    |||||||    
T  38458177 cgtttac 38458183  T

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Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 52370978 - 52371064
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  52370978 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 52371064  T

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Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 4387989 - 4388074
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||  ||| ||||||||||||||||||   ||||| |||| | || ||||| |||| | | |||||||||||||||||    
T  4387989 gcttaatacatgctttggtctcttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 4388074  T

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Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 24517665 - 24517584
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaac 197  Q
    ||||||||||||||||||| |||  | |||||||  | ||||| | || ||||||||||||  | |||||||||||||||||    
T  24517665 tcaatttggtcccataaatcttcctctgtttactaatgtggtcctttctgttagtttttaatcttaaatgtctaaggtgaac 24517584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 35684326 - 35684198
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| |||  ||||||||||||  | ||| | |||||| |||||||||||||   | ||||||||||||| ||  | ||||| |    
T  35684326 aaaggcttaatacatgctttggtccattaacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtc 35684228  T
Q  143 gtttactgttttggtcttctccgttagttt 172  Q
    |||  || |||||||| |||||||||||||    
T  35684227 gttacctcttttggtcctctccgttagttt 35684198  T

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Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 40135455 - 40135394
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaa 110  Q
    |||||||||  ||||||| |||||||||||||||| ||||| |||||| | |||||| ||||    
T  40135455 ttaatacatgttttagtcccttaacttatttttagatttcattttggtcctctaactttaaa 40135394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 47512208 - 47512119
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||||||||||||||||||   ||||| |||||| || ||||| ||||   | ||||||||||| |||||    
T  47512208 aaaggcttaatacatgttttggtctcttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtctcataa 47512119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 7485452 - 7485484
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttat 77  Q
    |||||||||||||||||| ||||||||||||||    
T  7485452 aggcttaatacatcatttggtctcttaacttat 7485484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 29001244 - 29001144
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| ||| |||| |||| | | |||| |||||||| ||  ||||||| |||    
T  29001244 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtccccaaactttaaaacgtctcaaattggtcccttatgtattctgtcgt 29001145  T
Q  145 t 145  Q
    |    
T  29001144 t 29001144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 45570311 - 45570466
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| ||||| ||||||   ||| ||||||||||||| | |||||| ||||||||| ||||||| ||   | |||| |||||| ||||| | |||||||    
T  45570311 aaaggtttaatgcatcatccggtcccttaacttatttt-atttttcagtttggttccttaactatcaaatgtctcaacttggtctcataactcttctgcc 45570409  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
     ||  || ||||||||  ||  |||| ||||||||   |||||||||||||||||||    
T  45570410 attacctattttggtccactttgttaatttttaaccctaaatgtctaaggtgaacca 45570466  T

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Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 18139607 - 18139436
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| |||||||||||||  |||||||||||| | | ||||||||||||  | |||| |||||||| || || |||||||||||    
T  18139607 gcttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgttt 18139508  T
Q  147 actgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  18139507 attgttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccacc 18139436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 33802137 - 33801966
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||||  | | |||||| |||||||||| |||||  ||||    
T  33802137 gcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagttt 33802038  T
Q  147 actgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    || || |||||| ||||||||||||||||||||||||| ||||||||  |||||| || |||||||||||||    
T  33802037 accgtattggtcctctccgttagtttttaacatcaaatatctaaggtagaccatgattcaaggtggtccacc 33801966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 31738356 - 31738511
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||| ||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  ||||||||||||||||||| | |||||| |    
T  31738356 aaggcttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcgg 31738455  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||||  |||||||| |||||||||||||||||| | |||||||||| ||||||||    
T  31738456 tttaccattttggtcctctccgttagtttttaaccttaaatgtctaatgtgaacca 31738511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 22300027 - 22299896
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| |||||||||  |||  || |||||||||||||| |||||||||||||| ||||||||||||||  | ||||||||||||||||||| |||||||    
T  22300027 aaaggtttaatacatgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgcc 22299928  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| |||||||| ||||||||| |||||    
T  22299927 gtttactattttggtcatctccgttatttttt 22299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 8412437 - 8412313
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||| |||| ||| |||||||||||||| ||||||| ||| || ||||||||||||||  | ||||||||||||||||||| || |||||||    
T  8412437 ggcttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtt 8412338  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |||| |||||||| |||||||||||    
T  8412337 tactattttggtcctctccgttagt 8412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 27438788 - 27438913
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||| ||| |||||||||||||| | ||||| |||||| |  |||||||||||  | |||||||| ||||||||||||||||||||||||    
T  27438788 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttac 27438887  T
Q  149 tgttttggtcttctccgttagttttt 174  Q
    | |||||||| ||||||||| |||||    
T  27438888 tcttttggtcatctccgttaattttt 27438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 27440295 - 27440146
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| ||||||||||||||   ||||| |||| | || ||||| ||||   | ||||||||||||||||||| |||| ||||||    
T  27440295 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 27440196  T
Q  147 actgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
    ||| |||||||| ||||||||| |||||||| | ||||||||||||||||    
T  27440195 actattttggtcctctccgttaatttttaactttaaatgtctaaggtgaa 27440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 33807683 - 33807812
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||| ||||  || |||||||||||||| |||||||||||||| || |||||||||||  | |||||||| | |||||||| |||||||||    
T  33807683 aggcttaatacattatttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgt 33807782  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    |||| ||||||||| ||||||||| |||||    
T  33807783 ttaccgttttggtcctctccgttaattttt 33807812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 9927600 - 9927753
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||| ||| | ||| |||||||||||||| ||||| | |||||| ||||||||||||||  | ||||||||||||||||||  |||   |||    
T  9927600 aggcttaatacagcatctggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa-cttcaatcgt 9927698  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||| |||||||| ||||||||| |||||||| | ||||||||||| |||||||    
T  9927699 ttactattttggtcatctccgttaatttttaaccttaaatgtctaagatgaacca 9927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 293762 - 293589
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttattttta-gttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||| || |||| ||||||||| ||||||||  ||||||| |||| |  ||||| |||||||  ||||||||||||| ||||| | ||||| |||    
T  293762 ggcttaatatattatttggtctcttaatttatttttttgttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtcgt 293663  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||  |||||||| ||||||||  |||||||| | |||||||||||||||||||  |||| ||||||||||||    
T  293662 ttaccattttggtcctctccgtttatttttaaccttaaatgtctaaggtgaaccaactttataggtggtccacc 293589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 8411083 - 8411203
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||||||||||  |||||||||||||| ||||||| ||| || ||||||||||||||  | |||||||||||  |||||| || |||||||||    
T  8411083 cttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgttta 8411182  T
Q  148 ctgttttggtcttctccgtta 168  Q
    || |||||||| |||||||||    
T  8411183 ctattttggtcctctccgtta 8411203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 5311272 - 5311386
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||||||||||||||  | |||||||||||| |||||| || || ||    
T  5311272 aaggcttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcg 5311371  T
Q  144 tttactgttttggtc 158  Q
    |||||| ||||||||    
T  5311372 tttactattttggtc 5311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 22298598 - 22298747
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| |||  ||||||||||||| ||||||| |||||| | |||| | |||||  | ||| |||| |||||||| |||||||||||    
T  22298598 aggcttaatacatgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgt 22298697  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtg 194  Q
    |||   |||||||||  |||||||||||||||| | ||||||||||||||    
T  22298698 ttataattttggtctcttccgttagtttttaaccttaaatgtctaaggtg 22298747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 31740394 - 31740265
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| |||  ||||||||||||| ||||||| |||||| || |||||||||||  | ||||||||||||||||||| || ||||||    
T  31740394 aggcttaatacatggtttggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgt 31740295  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||  |||||||| | |||||| ||||||    
T  31740294 ttaccattttggtcctatccgtttgttttt 31740265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 14328823 - 14328723
Alignment:
Q  118 aatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    ||||||||| ||||| | || || |||||||| |||||||| ||||||||| |||||||| | |||||||||||||||||||  |||| |||||||||||    
T  14328823 aatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccac 14328724  T
Q  218 c 218  Q
    |    
T  14328723 c 14328723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 14421833 - 14421733
Alignment:
Q  118 aatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    ||||||||| ||||| | || || |||||||| |||||||| ||||||||| |||||||| | |||||||||||||||||||  |||| |||||||||||    
T  14421833 aatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccac 14421734  T
Q  218 c 218  Q
    |    
T  14421733 c 14421733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 34084253 - 34084153
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||||||||| | ||||||||||||||  ||||| |||||||  | ||||||||||| ||||||| ||||| ||||    
T  34084253 ggcttaatacatcatttggtcccttaacttatttctggttttcactttggt--cctaaatataaagtgtctcaatttggtctcataaatcttctgtcgtt 34084156  T
Q  146 tac 148  Q
    |||    
T  34084155 tac 34084153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 13507178 - 13507121
Alignment:
Q  160 tctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  13507178 tctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtccac 13507121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 8447215 - 8447347
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||  ||||||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | || ||||||    
T  8447215 aggcttaatatatgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgt 8447314  T
Q  145 ttactgttttggtcttctccgttagtttttaac 177  Q
    |  || |||||||| | |||||||  |||||||    
T  8447315 tacctcttttggtcctatccgttacattttaac 8447347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 8456019 - 8456151
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||  ||||||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | || ||||||    
T  8456019 aggcttaatatatgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgt 8456118  T
Q  145 ttactgttttggtcttctccgttagtttttaac 177  Q
    |  || |||||||| | |||||||  |||||||    
T  8456119 tacctcttttggtcctatccgttacattttaac 8456151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 21749926 - 21749837
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  21749926 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 21749837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 2138760 - 2138632
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  ||| ||| ||||| |||||||| | ||| | |||||| ||||||||||||||  | ||||||| ||||| ||  | ||||| ||    
T  2138760 aaggcttaatacatgttttggtcccttaatttatttttggattttattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcg 2138661  T
Q  144 tttactgttttggtcttctccgttagttt 172  Q
    ||  || |||||||| |||| ||||||||    
T  2138660 ttacctcttttggtcctctctgttagttt 2138632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 12202415 - 12202327
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  12202415 aaggcttaatacatgctttggtcccttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12202327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 19367712 - 19367794
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  ||| ||| |||||||||||||    ||||| |||||| ||||||||||||||  | |||||||||||||    
T  19367712 ggcttaatacatgctttcgtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 19367794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 19368639 - 19368513
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| | ||||||||||||  | ||||||||||| | ||  | ||||| ||||    
T  19368639 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtcgtt 19368540  T
Q  146 tactgttttggtcttctccgttagttt 172  Q
      || |||| ||| |||||||||||||    
T  19368539 acctcttttagtcctctccgttagttt 19368513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 34083075 - 34083117
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaa 110  Q
    |||||||||||||||||||||||||||||  ||||| ||||||    
T  34083075 cttaacttatttttagttttcactttggtctcctaattataaa 34083117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 2130877 - 2130950
Alignment:
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||||||| ||||| ||||| |||||| | |||| ||||||||||||||  |||| ||||||| ||||    
T  2130877 ttactattttggtcctctcccttagtatttaaccttaaatatctaaggtgaaccacctttataggtggttcacc 2130950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 683661 - 683581
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtc 126  Q
    ||||||||| ||||||| |||  ||||||||||||  ||||||| |||||| ||||| |||| || | |||||| ||||||    
T  683661 ggcttaatatatcatttggtcctttaacttattttctgttttcaatttggtcccctacctattaaacgtttcaaattggtc 683581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 13173032 - 13173112
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtc 126  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||| | |||||| ||||||||||||||  | |||||||||||    
T  13173032 ggcttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 13173112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 15435686 - 15435722
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttattttt 81  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  15435686 aggcttaatacatcatttggtcccttaacttattttt 15435722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 28225421 - 28225501
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||  ||| ||| |||||||||||||    ||||| |||||| ||||||||||||||  | |||||||||||||    
T  28225421 cttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 28225501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 30231601 - 30231629
Alignment:
Q  171 ttttaacatcaaatgtctaaggtgaacca 199  Q
    |||||||||||||||||||||||||||||    
T  30231601 ttttaacatcaaatgtctaaggtgaacca 30231629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 19621997 - 19622172
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| |||||||||||||| |||  |||| |||||||| |||||||||||||| ||||||||||||||  | ||||||| ||| ||||||| ||||||     
T  19621997 aaagggttaatacatcatttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgct 19622096  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
     ||||||| ||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  19622097 atttactggtttggtcctctccgttagttttcaacatcaaatgtttaaggtgaactatgtttaaaggtggtccacc 19622172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 17350223 - 17350051
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||| |||| | ||||||||||||||  | ||||||||||||| ||  | |||| | |||    
T  17350223 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgtt 17350124  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17350123 acctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccacc 17350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 39133015 - 39133184
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    ||||||||||||||  ||||||||||||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||| ||  | ||||  ||||  |    
T  39133015 ttaatacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacc 39133114  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | |||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39133115 tcttttggtcctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccacc 39133184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 8371214 - 8371387
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||  || |||||||||||||| ||||||| |||||| |||||||||||||   | |||||||||| |||||||| |||||| ||    
T  8371214 aggcttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagt 8371313  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||| | ||||| |  ||| ||||||||||||    
T  8371314 ttactattttggtcctctccgttagtttttaacatcaaatatctaaagcgaaccgtacttagaggtggtccacc 8371387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 218
Target Start/End: Original strand, 25583104 - 25583280
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctg 140  Q
    |||| ||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||| || | | ||||||||||||||||| | |||||    
T  25583104 agaagggcttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctg 25583203  T
Q  141 ccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||||| |||||||| |||| |||| |||||||| | |||||||||||| |||| ||  ||||||||| ||||||    
T  25583204 ccgtttactattttggtcctctctgttaatttttaaccttaaatgtctaaggcgaactat-attaaaggtgctccacc 25583280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 53808314 - 53808485
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| |||||||||||||  ||||| | ||||||  |||||||||||||  | ||||| ||||||||||||| || || |||||    
T  53808314 gcttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgttt 53808413  T
Q  147 actgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||| |||||||| ||||| ||||||||||||||||||| ||||||||||| ||| | |||||||||||||||    
T  53808414 actattttggtcatctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtccacc 53808485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 69 - 218
Target Start/End: Original strand, 11219448 - 11219597
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| | ||||| |||||| ||||||||||||||  | ||||||||||| ||| | | |||||||||||||| |||||||| |||||||||    
T  11219448 ttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgtta 11219547  T
Q  169 gtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | |||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  11219548 gattttaacatcaaaattctaaggtgaaccatatttaaaggtggttcacc 11219597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 47765431 - 47765605
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||| |  ||||||||||||||||  |||||||||||||| ||||||||||||||  | |||| ||| |||| || || ||| |      
T  47765431 aaaggcttaatacatcatctgctctcttaacttattttccgttttcactttggt-ccctaactataaagtgtctcaaattgatcccttatatcttccgtt 47765529  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||  |||||| |||||||||    
T  47765530 gtttattgttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccacc 47765605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 51400209 - 51400360
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||| |||||||||||| ||||||||||||||||  | ||||||| ||||||||||| ||| |||||    
T  51400209 aggcttaatacatgttttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgt 51400308  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
     |||  |||||||| | |||||| ||||||||||| |||||||| |||||||    
T  51400309 ataccattttggtcctttccgtttgtttttaacattaaatgtcttaggtgaa 51400360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 51825745 - 51825618
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||| ||||||| ||| |||||||||||||| | |||||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |    
T  51825745 aaaggcttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtc 51825646  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    ||||||| |||||||| | |||||||||    
T  51825645 gtttactattttggtcatatccgttagt 51825618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 26799027 - 26798855
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| |||||||||||||||||| ||||| | |||||| |||||||||||||   | ||||||||||||||||| | |||  |||||    
T  26799027 ggcttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgtt 26798928  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||  |||||||| |||||||||||||||||| | |||||  ||| | ||||||  |||  ||||||||||||    
T  26798927 taccattttggtcctctccgttagtttttaaccttaaatggttaaagcgaaccaactttgtaggtggtccacc 26798855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 47808227 - 47808105
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||| |||||| |||||||||||||| | ||||||||||||||| |||||||||||  | ||||||||||| ||||||| ||||| ||||    
T  47808227 ggcttaatacatcacttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtt 47808128  T
Q  146 tactgttttggtcttctccgtta 168  Q
    | || |||||||| |||||||||    
T  47808127 tgctattttggtcctctccgtta 47808105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 41386120 - 41386247
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctg 140  Q
    |||||||||||||||||| ||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  | |||||||||| |||||||| ||  |    
T  41386120 agaaaggcttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacg 41386219  T
Q  141 ccgtttactgttttggtcttctccgtta 168  Q
     |||||||| |||||||| |||||||||    
T  41386220 acgtttactattttggtcctctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 41387557 - 41387430
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| |||||||||||||   | ||||||||||||||||||  ||   ||    
T  41387557 aaaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacacc 41387458  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    ||||||| |||||||| |||||||||||    
T  41387457 gtttactattttggtcctctccgttagt 41387430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 54654087 - 54653964
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||||||||||| | ||||| |||||| || |||||||||||  | ||||||||||||||||| | ||||| ||||    
T  54654087 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtt 54653988  T
Q  146 tactgttttggtcttctccgttag 169  Q
    |||| |||||||| ||||||||||    
T  54653987 tactattttggtcctctccgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 32979082 - 32979255
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||| ||||||  ||| ||| ||||||| |||||||  ||||| |||||| | ||||||||||||  | |||||||| |||||||||| ||||||  |    
T  32979082 aggcttgatacatgctttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctgcaat 32979181  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  || |||||||| |||||||||||||||||||| ||| | ||||||||||| || |||||||||||| ||||    
T  32979182 tacctcttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcacc 32979255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 7820385 - 7820513
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| | ||||||||||||  ||||||||||| ||||||||| || || ||||    
T  7820385 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtt 7820484  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    ||||||||||||| |||||||||||||||    
T  7820485 tactgttttggtcctctccgttagttttt 7820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 32980573 - 32980445
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||| |||||||  ||  ||||||||||||  ||||||| |||||| ||||||||| ||||  | |||||||||||| |||||| ||||||||||    
T  32980573 ggcttaatatatcatttgatccattaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtt 32980474  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    |||| |||||||| |||||||||||||||    
T  32980473 tactattttggtcatctccgttagttttt 32980445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 42632701 - 42632825
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| ||||||||| |||| ||||||| |||||| ||||||||||||||  | |||||||| |||||||||| || || ||||    
T  42632701 ggcttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtt 42632800  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |||| |||| ||| |||||||||||    
T  42632801 tactattttagtcctctccgttagt 42632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 42634010 - 42633883
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||||| |||||| ||||||||||| ||  | ||||||||||||||||||| || || |    
T  42634010 aaaggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtc 42633911  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    ||||| | |||||||| |||| ||||||    
T  42633910 gtttattattttggtcctctctgttagt 42633883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 10987774 - 10987652
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||||||  || |||||||||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||||||||| || |||||||    
T  10987774 ggcttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgtt 10987675  T
Q  146 tactgttttggtcttctccgtta 168  Q
    |  | |||||||| |||| ||||    
T  10987674 ttttattttggtcctctctgtta 10987652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 47855460 - 47855331
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| |  |||||||||||  | |||||||||||| |||||| |||||||||    
T  47855460 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgt 47855361  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| |||||||| ||||||||| |||||    
T  47855360 ttactattttggtcctctccgttatttttt 47855331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 51401472 - 51401371
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  | | ||| |||||||||||||| |||||||||||||| ||||||||||||||  | ||||||||||||||||||| ||||||||||    
T  51401472 ggcttaatacatgctctggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtt 51401373  T
Q  146 ta 147  Q
    ||    
T  51401372 ta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 11220782 - 11220651
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| ||||||||||||||  | |||||||||||| |||||| ||||| |    
T  11220782 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtc 11220683  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| ||||||||  ||||||| ||||||    
T  11220682 gtttactattttggtcccctccgtttgttttt 11220651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 8372739 - 8372609
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||| ||| ||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  | |||||||||||||||||||   |  | |    
T  8372739 aaggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatccacaacag 8372640  T
Q  144 tttactgttttggtcttctccgttagttttt 174  Q
    |||||| ||||||||  ||||||||||||||    
T  8372639 tttactattttggtcacctccgttagttttt 8372609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 218
Target Start/End: Complemental strand, 34903115 - 34902943
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag-catttcaatttggtcccataaatattctgccg 143  Q
    |||||||||||||||||||||| ||||| ||| ||||  ||||||   |||| || |||||| |||  | ||||||||||||| | ||  | ||||| ||    
T  34903115 aggcttaatacatcatttagtcccttaatttaattttt-ttttcaaaatggtcccttaactaaaaaaacgtttcaatttggtctcttatgttttctgtcg 34903017  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    || ||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||    
T  34903016 tt-actcttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcacc 34902943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 53809615 - 53809486
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||| |||| | | ||||||| ||| ||||| | |||  ||||    
T  53809615 aggcttaatacatcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtctcataagttttcctccgt 53809516  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    |||||  | | ||| |||||||||||||||    
T  53809515 ttactaatgttgtcatctccgttagttttt 53809486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 25585957 - 25585826
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||| || |||| ||| ||||| ||||||||  |||||||| |||| | |||||||| || | | ||||||||||| ||||||| ||||| |    
T  25585957 aaaggcttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtc 25585858  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| |||| ||| |||||||||||||||    
T  25585857 gtttactattttagtcatctccgttagttttt 25585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 12062503 - 12062333
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||| |   ||| |||||||||||||   |||||| |||||| || ||||||| |||  | ||||||||||||||| | | || ||| |||||    
T  12062503 cttaatacatcctccggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgttta 12062404  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    || |||||||| | ||| |||||||||||| | |||||||||||||||||||  |||| ||||| ||||||    
T  12062403 ctattttggtcatttccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtgatccacc 12062333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 23559884 - 23559986
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    |||||||| |||||||| | ||||| |||||||| |||||||| |||||||||||||||||| | || |||||||| |||||||  |||| |||||||||    
T  23559884 tcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagtttttaaccttaattgtctaagatgaaccaactttataggtggtcc 23559983  T
Q  216 acc 218  Q
    |||    
T  23559984 acc 23559986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 54752609 - 54752723
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||| ||| ||||||||||||||  |||||| ||| || ||||||||||||||  | ||||||||||||  || || || |||||    
T  54752609 aaggcttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccg 54752708  T
Q  144 tttactgttttggtc 158  Q
    |||||| ||||||||    
T  54752709 tttactattttggtc 54752723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 167
Target Start/End: Complemental strand, 49122123 - 49122002
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||| ||||||| |||  ||||||||||||| ||||||| ||||||  | |||||||||||  | ||||||||||| ||||| | ||||||||||    
T  49122123 ggcttaatatatcatttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgtt 49122024  T
Q  146 tactgttttggtcttctccgtt 167  Q
    |||  |||||||||| ||||||    
T  49122023 taccattttggtcttttccgtt 49122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 17345306 - 17345433
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||| |||| ||| |||||||||||||| |||||||  ||||| ||||||||| |||| || |||||||||| || ||||| |||| | | |    
T  17345306 ggcttaatacattatttggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatcttcttctg-t 17345404  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    |||  |||||||| |||||||||||||||    
T  17345405 tacctttttggtcctctccgttagttttt 17345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 29536709 - 29536837
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| ||| |||||||||| | ||||| |||| | | ||||||||||||  | ||||||||||||||||||| ||||  ||||    
T  29536709 ggcttaatacatgttttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtt 29536808  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    |||| |||||||| |||||||||| ||||    
T  29536809 tactattttggtcctctccgttagctttt 29536837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 2124069 - 2124148
Alignment:
Q  91 tttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagt 170  Q
    ||||||||||||||||||||  || | ||||||||||||||||| || ||||||||||| |||||||| |||||||||||    
T  2124069 tttggttccctaactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtcatctccgttagt 2124148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 36626727 - 36626850
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||| ||||||| |||  ||||||||||||   ||| || ||||||| ||||||||| |||  ||||||||||||||| ||||| || || |||||    
T  36626727 gcttaatatatcatttggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgttt 36626826  T
Q  147 actgttttggtcttctccgttagt 170  Q
    |||||||||||| ||| |||||||    
T  36626827 actgttttggtcctcttcgttagt 36626850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 47806810 - 47806936
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||| ||||||||||||||||||  |||||||||||||| | ||||| |||||| || ||| |||||||  | |||||||| ||| |||||| ||||||     
T  47806810 aaagacttaatacatcatttagtaccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgct 47806909  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    ||||||  |||||||| |||||||||||    
T  47806910 gtttac-attttggtcctctccgttagt 47806936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 43101896 - 43102010
Alignment:
Q  53 tacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgtt 152  Q
    |||||||||| ||| |||||||||||||| ||||||| |||||| | |||| |||||||  | ||||||||||||||||| | ||||| || ||||| ||    
T  43101896 tacatcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactatt 43101995  T
Q  153 ttggtcttctccgtt 167  Q
    ||| || ||||||||    
T  43101996 ttgatcatctccgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 19253099 - 19253002
Alignment:
Q  70 taacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||| ||||||| |||||| |||||| ||||||   | |||||||| ||||||||||||||||||||||||  |||||||| | ||||||    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgtt 19253002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 32973131 - 32973260
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | |||||||    
T  32973131 aaaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcc 32973230  T
Q  143 gtttactgttttggtcttctccgttagttt 172  Q
    |||  || |||| ||| |||||||||||||    
T  32973231 gttacctctttttgtcctctccgttagttt 32973260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 49334459 - 49334330
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||| ||  || |||||||||| ||||||| |||||| |  ||||||||||   | ||||| |||||| |||||| |||| ||||    
T  49334459 aggcttaatacatcatttaatcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgt 49334360  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| ||||| || |||| ||||||||||    
T  49334359 ttactattttgatcatctctgttagttttt 49334330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 7483653 - 7483474
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttattt--ttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattc 138  Q
    |||||||||||||| |||  || ||| ||||||||| ||  ||  |||||| | |||| ||||||||| ||| | | | || |||||||| ||  | |||    
T  7483653 agaaaggcttaatatatccgttggtcccttaacttaattctttttttttcagtatggtcccctaactaaaaaacgtcttaaattggtcccttatgtcttc 7483554  T
Q  139 tgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | |||||  || |||||||| ||||||||||||||||||||||||| ||||||||||||||| || ||| |||| |||||    
T  7483553 ttccgttacctcttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccacc 7483474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 32974344 - 32974213
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | ||||||||||    
T  32974344 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgtt 32974245  T
Q  146 tactgttttggtcttctccgttagtttttaac 177  Q
      || |||||||| |||||||||  |||||||    
T  32974244 acctcttttggtcatctccgttacattttaac 32974213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 43103419 - 43103293
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||| || ||||  || ||||||||||||||  |||| | |||| | ||||||||| |||  || ||||||||||  ||||||| ||||||||    
T  43103419 aaggcttaatatattatttgatcccttaacttattttttatttttattttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccg 43103320  T
Q  144 tttactgttttggtcttctccgttagt 170  Q
    |||||| |||||||| | |||||||||    
T  43103319 tttactattttggtcctttccgttagt 43103293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 48338239 - 48338177
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| |||||    
T  48338239 aggcttaatacatcatttggtcccttaacttattttcagttttcaatttggttccctgactat 48338177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 177
Target Start/End: Original strand, 53047889 - 53048023
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | ||||| |    
T  53047889 aaaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtc 53047988  T
Q  143 gtttactgttttggtcttctccgttagtttttaac 177  Q
    |||  || |||||||| |||||||||  |||||||    
T  53047989 gttacctcttttggtcctctccgttacattttaac 53048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 35174481 - 35174332
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   |||||| |||||| || ||||||| |||  ||||||  ||||||||||| | ||||  |||||||| |||||||| | || |||    
T  35174481 cttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtt 35174382  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    | |||||||| | ||| |||||||||||||||  |||| |||| ||||||    
T  35174381 aatttttaaccttaaaagtctaaggtgaaccaactttataggtagtccac 35174332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 48252927 - 48253056
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||| |||  ||| ||| ||||||||||| || ||||| | |||||| ||||||||||||||  | ||||||||||||||||| | |||  ||||    
T  48252927 aggcttaatgcatgctttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgt 48253026  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    |||||  | | ||| |||||||||||||||    
T  48253027 ttactaatgtagtcatctccgttagttttt 48253056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 53049161 - 53049032
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| |||||||||||||  | ||| | |||||| ||||||||||||||  | ||||||||||||| ||  | ||||| |    
T  53049161 aaaggcttaatacatgttttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtc 53049062  T
Q  143 gtttactgttttggtcttctccgttagttt 172  Q
    |||  || |||||||| |||||||||||||    
T  53049061 gttacctcttttggtcctctccgttagttt 53049032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 48035445 - 48035314
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | || |||||||    
T  48035445 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgccgtt 48035346  T
Q  146 tactgttttggtcttctccgttagtttttaac 177  Q
      || |||||||| |||||||||  |||||||    
T  48035345 acctcttttggtcctctccgttacattttaac 48035314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 19622219 - 19622281
Alignment:
Q  252 caaaaagagaaccgttggatcatataagtatgttgtatcttacgataaactatcaacgcctaa 314  Q
    ||||||||||| |||||||||||||| || |||| ||||||||||| |||||||||| |||||    
T  19622219 caaaaagagaaacgttggatcatataggtctgttatatcttacgatgaactatcaacacctaa 19622281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 19623041 - 19622975
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    ||||||||||||||| ||  || |||||||||||||| ||||||||||||||  |||||||||||||    
T  19623041 aggcttaatacatcacttgctcccttaacttattttttgttttcactttggtctcctaactataaag 19622975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 21127990 - 21128092
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    ||||||||||||||||| | |||||||||||||  |||||||| | |||||  |||||||||   |||||||||||||| ||||   ||| |||||||||    
T  21127990 tcaatttggtcccataactcttctgccgtttaccattttggtcatttccgtctgtttttaaccctaaatgtctaaggtggaccaacattataggtggtcc 21128089  T
Q  216 acc 218  Q
    |||    
T  21128090 acc 21128092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 43345336 - 43345442
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   || ||| || ||| || ||||||||||   ||||||||||||||||||||| ||||  |||||||  ||||||| |||||||||    
T  43345336 cttaacttattttattttctcagttaggtcccttaactataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgtt 43345435  T
Q  168 agttttt 174  Q
    |||||||    
T  43345436 agttttt 43345442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 10986675 - 10986756
Alignment:
Q  74 ttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttg 155  Q
    |||||||| |||||||||||||| |  |||||||||||  |||||||||||||| |||||| ||  |||||||||| |||||    
T  10986675 ttatttttggttttcactttggtccattaactataaagtgtttcaatttggtcctataaattttacgccgtttactattttg 10986756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 13078071 - 13077962
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    ||||||||||| |||  ||||||||||||||||||  |||||| |||||| | |||| ||||||   | | ||||||||||||||||| || || |||||    
T  13078071 gcttaatacattattaggtctcttaacttatttttgattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatcttatgtcgttt 13077972  T
Q  147 actgttttgg 156  Q
    ||| ||||||    
T  13077971 actattttgg 13077962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 47767048 - 47766944
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||||||| | |||  |||||||||  | | ||| ||| |||||    
T  47767048 ttaacttatttttggttttcattttggt-ccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtcgtcctctgcgtta 47766950  T
Q  169 gttttt 174  Q
    ||||||    
T  47766949 gttttt 47766944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 51213701 - 51213612
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||||||| ||||||||||||||   ||||| |||| | || ||||| |||| ||| |||||||||||||||||    
T  51213701 aaaggcttaatacatgttttagtcccttaacttatttttgaatttcattttgatcccttaactttaaaccatctcaatttggtcccataa 51213612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 19579212 - 19579296
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    |||||||||||||||  ||| ||| ||||||||||||| || ||||| |||||| |||||||||||||   | ||||||||||||    
T  19579212 aaaggcttaatacatgctttggtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtcc 19579296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 29537191 - 29537135
Alignment:
Q  118 aatttggtcccataaatattctgccgtttactgttttggtcttctccgttagttttt 174  Q
    ||||| ||||||||||| |||||||||||||  |||||||| |||||||||||||||    
T  29537191 aatttcgtcccataaatcttctgccgtttacaattttggtcctctccgttagttttt 29537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 39288562 - 39288478
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | |||||||||||||    
T  39288562 aaggcttaatacatgctttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 39288478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 19622329 - 19622371
Alignment:
Q  356 atcaacacattcatactccttagtcaattttcatataacccag 398  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  19622329 atcatcacattcatactccttagtcaatcttcatataacccag 19622371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 24753504 - 24753462
Alignment:
Q  165 gttagtttttaacatcaaatgtctaaggtgaaccatgtttaaa 207  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  24753504 gttagtttttaacttcaaatgtctaaggtgaaccatctttaaa 24753462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 31638218 - 31638283
Alignment:
Q  151 ttttggtcttctccgttagtttttaacatcaaatgt--ctaaggtgaaccatgtttaaaggtggtc 214  Q
    ||||| || |||||| |||||||||||||||||| |  |||||||||||||| |||||||||||||    
T  31638218 ttttgatcctctccgctagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtc 31638283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 51824123 - 51824169
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttg 94  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  51824123 cttaatatatcatttggtctcttaacttatttttagtttttactttg 51824169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 12105351 - 12105440
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||||| | |||||||||||| ||||    
T  12105351 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaagcgtctcaatttggtccaataa 12105440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 23886108 - 23886197
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  23886108 aaaggcttaatacatactttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 23886197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 24753611 - 24753547
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    |||||||||||||||||||||  |||| |||||||| ||||| | |||||| ||||||||||||||    
T  24753611 ggcttaatacatcatttagtca-ttaatttatttttggtttttagtttggtcccctaactataaag 24753547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 46987317 - 46987406
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  46987317 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 46987406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 48336342 - 48336403
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||||||  || ||||||||||||| |||||||| |||||| | ||||||||    
T  48336342 ggcttaatacatcatttgctcccttaacttattttcagttttcaatttggtcctctaactat 48336403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 39287487 - 39287591
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||  | ||||| |||||| | ||||||||||||  | ||||||||||||| ||  | ||||| ||||  || |||||||| ||||||||    
T  39287487 cttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcctctccgtt 39287586  T
Q  168 agttt 172  Q
    |||||    
T  39287587 agttt 39287591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 52292588 - 52292720
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||| ||||| ||  | || || |||    
T  52292588 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtcccgtatgtcttttgtcgt 52292687  T
Q  145 ttactgttttggtcttctccgttagtttttaac 177  Q
    |  || |||||||||| |||||||  |||||||    
T  52292688 tacctcttttggtcttatccgttacattttaac 52292720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 53342708 - 53342792
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    |||||||||||||||  ||| ||  |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||    
T  53342708 aaaggcttaatacatgctttggttccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcc 53342792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 30432734 - 30432647
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||  ||| |||  ||||||||||||||  ||||| |||| | || ||||| |||| | |||||||||||||||||||    
T  30432734 aggcttaatacatgttttggtcctttaacttatttttaaatttcattttgatcccttaactttaaaccgtttcaatttggtcccataa 30432647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 33563942 - 33564009
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    ||||||||||||||  ||| ||| |||||||||||||| | ||||| ||| || ||||||||||||||    
T  33563942 aaggcttaatacatgttttggtcccttaacttatttttggatttcattttagtcccctaactataaag 33564009  T

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Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 48825802 - 48825889
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||||||  ||| ||| |||||||||||||    ||| | |||| ||||||||||||||||  | |||||||||||||    
T  48825802 agaaaggcttaatacatgttttggtcccttaacttattttcgaattttattttgattccctaactataaagtgtctcaatttggtccc 48825889  T

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Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 51213445 - 51213532
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||  ||| ||||||||||||||||||   ||||| ||| || || ||||| |||| | | |||||||||||||||||    
T  51213445 aggcttaatacatgctttggtctcttaacttatttttgaatttcattttcgtcccttaactttaaaccgtctcaatttggtcccataa 51213532  T

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Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 52293641 - 52293518
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||  ||  | ||||  ||||  |    
T  52293641 ttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacc 52293542  T
Q  149 tgttttggtcttctccgttagttt 172  Q
    | |||||||| |||||||||||||    
T  52293541 tcttttggtcctctccgttagttt 52293518  T

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Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 55443672 - 55443589
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||  ||| ||| |||||||||||||    ||||| |||||| ||||||||||||||  | |||||||||||||    
T  55443672 aggcttaatacatactttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 55443589  T

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Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 12106628 - 12106542
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||  ||| ||||||||||||||||||   ||||| ||||||  | ||||| |||| | | |||||||||||||||||    
T  12106628 ggcttaatacatgctttggtctcttaacttatttttgaatttcattttggtctcttaactttaaaccgtctcaatttggtcccataa 12106542  T

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Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 19579415 - 19579333
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| || |||||||||||  | |||||||||||||    
T  19579415 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtccc 19579333  T

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Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 23886947 - 23886861
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  23886947 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataa 23886861  T

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Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 26797313 - 26797347
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttattt 79  Q
    |||||||||||||||||||||| ||||||||||||    
T  26797313 aggcttaatacatcatttagtcccttaacttattt 26797347  T

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Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 40502338 - 40502260
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaattt 122  Q
    |||| |||||||||  ||| ||| |||||||||||||| | ||| | |||||| |||||||||||||| || |||||||    
T  40502338 aaggtttaatacatgttttggtcccttaacttatttttggattttattttggtcccctaactataaagtatctcaattt 40502260  T

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Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 2225146 - 2225065
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtc 126  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| |||||||| ||||   | |||||||||||    
T  2225146 aggcttaatacatgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtc 2225065  T

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Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 13041939 - 13042028
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||| | || ||||| |||| | | |||||||||||||||||    
T  13041939 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 13042028  T

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Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 13050016 - 13050105
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||| | || ||||| |||| | | |||||||||||||||||    
T  13050016 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 13050105  T

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Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 19283726 - 19283815
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | ||||||| |||||||||    
T  19283726 aaaggcttaatacatgttttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttagtcccataa 19283815  T

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Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 25583327 - 25583388
Alignment:
Q  253 aaaaagagaaccgttggatcatataagtatgttgtatcttacgataaactatcaacgcctaa 314  Q
    ||||||||||||||||||| ||||| || ||||||| |||||| | ||| |||||| |||||    
T  25583327 aaaaagagaaccgttggattatataggtctgttgtaccttacggtgaaccatcaacacctaa 25583388  T

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Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 30838594 - 30838505
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||| || |||| ||| ||||||||||||||   ||| | |||||| || ||||| ||||  || |||||||||||||||||    
T  30838594 aaaggcttaatatatgatttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 30838505  T

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Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 47854565 - 47854610
Alignment:
Q  129 ataaatattctgccgtttactgttttggtcttctccgttagttttt 174  Q
    |||||| |||| ||||||||| |||||||| |||||||||||||||    
T  47854565 ataaatcttcttccgtttactattttggtcctctccgttagttttt 47854610  T

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Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 383094 - 383010
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttattttt-agttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||   |||||| || |||||||||| ||| |||||||||||||    
T  383094 aggcttaatacatgctttggtcccttaacttatttttgaattttatttttggtcccataactataaaacatctcaatttggtccc 383010  T

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Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 91)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 4857200 - 4857347
Alignment:
Q  50 taatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttact 149  Q
    |||||||||||||  || |||||||||||||| |||||||||||||| |||||||||||||   | || ||||||||||| |||| ||||||||||||||    
T  4857200 taatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttact 4857299  T
Q  150 gttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaac 197  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  4857300 gttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaac 4857347  T

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Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 38406011 - 38406184
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    |||||||||||||| |||| |||  |||| |||||||| ||||||| |||||| ||||||||||||||  | ||||  |||| |||||||| ||||| ||    
T  38406011 aaggcttaatacattatttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacg 38406110  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccac 217  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  38406111 tttactgttttggtcctttccgttaatttttaacatcaaatgtctaaggtgaaccatatttaaaggtagtccac 38406184  T

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Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 14109180 - 14109020
Alignment:
Q  56 atcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttg 155  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| || ||||||||||   | ||||  |||||||||   | || |||||||||| |||||     
T  14109180 atcatttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgtttta 14109083  T
Q  156 gtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14109082 gtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 14109020  T

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Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 14419137 - 14418977
Alignment:
Q  56 atcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttg 155  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| || ||||||||||   | ||||  |||||||||   | || |||||||||| |||||     
T  14419137 atcatttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgtttta 14419040  T
Q  156 gtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14419039 gtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 14418977  T

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Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 40926640 - 40926518
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||  | |||||||||||| |||||| |||| |||||    
T  40926640 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccgtt 40926541  T
Q  146 tactgttttggtcttctccgtta 168  Q
    ||| ||||||||| |||||||||    
T  40926540 taccgttttggtcctctccgtta 40926518  T

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Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 22061918 - 22061792
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||| ||| |||||||||||||  ||||||| |||||| ||||||||||||| | | ||||||||||||||||||| || |||||    
T  22061918 aaggcttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccg 22061819  T
Q  144 tttactgttttggtcttctccgttagt 170  Q
    |||||| |||| |||||||||||||||    
T  22061818 tttactattttagtcttctccgttagt 22061792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 40930412 - 40930578
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||| |||  || ||| | |||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||| || ||  ||    
T  40930412 aggcttaatacatcgtttgatcccttgatttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgt 40930511  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtg 211  Q
    |||| ||||| ||| ||||  ||||||||||||||||||| ||||||||| |||||| || ||||||    
T  40930512 ttaccgttttagtcctctctattagtttttaacatcaaatatctaaggtggaccatgattcaaggtg 40930578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 46458834 - 46458662
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||| ||| ||| ||||| | ||||||  |||||| |||||| || |||||||||||  | ||||||||||||||||||| |||| |||||    
T  46458834 ggcttaatacatcgtttggtcccttaagtaatttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgtt 46458735  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||  |||||||| |||||||| ||||||||| | |||||||||||||||||||  |||| |||| |||||||    
T  46458734 taccattttggtcctctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataggtagtccacc 46458662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 13446782 - 13446651
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||   ||||||| ||  | ||||||||||||||||||| |||||||    
T  13446782 aaaggcttaatacatcatttggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgcc 13446683  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||| | | |||||| |||||||||||||||    
T  13446682 gtttattatattggtcctctccgttagttttt 13446651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 33459666 - 33459511
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||| |||||| | ||||||||||||  | ||||||||||||||||| | |||  |||    
T  33459666 aaggcttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccg 33459567  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||||  | ||||||| || ||||||||||||| | || ||||||||||||||||    
T  33459566 tttactaatgtggtcttttctgttagtttttaaccttaactgtctaaggtgaacca 33459511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 22744741 - 22744863
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||| ||| || ||||||||||||||  |||||||||||||| |||||| || |||||||    
T  22744741 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtt 22744840  T
Q  146 tactgttttggtcttctccgtta 168  Q
    |||| ||||||||||||||||||    
T  22744841 tactattttggtcttctccgtta 22744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 43930316 - 43930462
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||| ||||||| ||| ||||||||||||||  ||||||||||||| |||||||||| || | | |||||||||||| |||||| ||||| ||||||    
T  43930316 cttaatatatcatttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgttta 43930415  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtg 194  Q
    || |||||||| |||| |||| |||||||| | ||||||||||||||    
T  43930416 ctattttggtcctctctgttaatttttaaccttaaatgtctaaggtg 43930462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 19279731 - 19279609
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||| ||| ||| |||||||||||||| |||||||||||||| ||||||||||||||  | ||||||||||||||||||| || || ||||||    
T  19279731 cttaatacatcgtttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgttta 19279632  T
Q  148 ctgttttggtcttctccgttagt 170  Q
    || |||||||| | |||||||||    
T  19279631 ctattttggtcctttccgttagt 19279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 1970807 - 1970911
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||| | ||||||||| |||||||| ||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||  |||||    
T  1970807 aggcttaatacatcatctggtctcttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataaatattacgccgt 1970906  T
Q  145 ttact 149  Q
    |||||    
T  1970907 ttact 1970911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 25153653 - 25153773
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||||||||||   |||||| |||||| ||||||||||||||  | ||||||||||||||||||| |||| |||||    
T  25153653 ggcttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccgtt 25153752  T
Q  146 tactgttttggtcttctccgt 166  Q
    ||| ||||||||||| |||||    
T  25153753 taccgttttggtcttgtccgt 25153773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 25155054 - 25154885
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||| ||| |||||||||||||| ||||||| |||| | || |||||||||||  | |||||||  || ||||||| |||| | |||||     
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttat 25154955  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      |||||||| |||||||| ||||||||| | |||||||||||||||||||  |||| | ||||||||||    
T  25154954 cattttggtcatctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataagtggtccacc 25154885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 43006379 - 43006504
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| |||||| |||||||||| |||  | ||||||||||||| ||| | || ||||||    
T  43006379 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgt 43006478  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    || || |||||||| |||||||||||    
T  43006479 ttgctattttggtcatctccgttagt 43006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 46675058 - 46674933
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||||||||||||  || |||||||||||||| ||||||| |||| | || |||||||||||  | || |||||||||||||||| || ||||    
T  46675058 aaaggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgcc 46674959  T
Q  143 gtttactgttttggtcttctccgtta 168  Q
    ||||||| |||||||| |||||||||    
T  46674958 gtttactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 4858464 - 4858357
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||   | ||||||||||||||||||| |||||  ||||    
T  4858464 gcttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgttt 4858365  T
Q  147 actgtttt 154  Q
    ||| ||||    
T  4858364 actatttt 4858357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 19278348 - 19278471
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||||||||||| | ||||| |||||| || ||| |||||||  | ||||||||||||||||| | ||||||||||    
T  19278348 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtt 19278447  T
Q  146 tactgttttggtcttctccgttag 169  Q
    |||| |||||||| ||| ||||||    
T  19278448 tactattttggtcctcttcgttag 19278471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 22746444 - 22746317
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| ||||||||| |||| |||  ||||||||||||| ||||||| ||| || ||||||||||||||  | ||||||||||||||||||| || ||||    
T  22746444 aaaggtttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgcc 22746345  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    ||||||| ||||| || |||||||||||    
T  22746344 gtttactattttgatcctctccgttagt 22746317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 41516462 - 41516317
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||| ||||||| |||||||||||||||||| ||||| | |||||| ||||||||||||||  | | ||||||||||||||| |||||| |||||||     
T  41516462 ttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataagtattcttccgtttag 41516363  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtg 194  Q
    |  | ||||| | || ||||||||||||  | ||||||||||||||    
T  41516362 taatgtggtcatttctgttagtttttaatcttaaatgtctaaggtg 41516317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 4167516 - 4167618
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    |||||||| ||| |||| | ||||| ||||||||||||| ||| | || || | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  4167516 tcaatttgatcctataagtcttctgtcgtttactgttttagtcatttctgtcaatttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtcc 4167615  T
Q  216 acc 218  Q
    |||    
T  4167616 acc 4167618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 14206690 - 14206796
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    ||||| |||||||| ||||||||||||||  ||||||||||||   |||||||||||||| |||||| ||||| |||||||| ||||| || ||||||||    
T  14206690 cttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtt 14206789  T
Q  168 agttttt 174  Q
    |||||||    
T  14206790 agttttt 14206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 14215380 - 14215486
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    ||||| |||||||| ||||||||||||||  ||||||||||||   |||||||||||||| |||||| ||||| |||||||| ||||| || ||||||||    
T  14215380 cttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtt 14215479  T
Q  168 agttttt 174  Q
    |||||||    
T  14215480 agttttt 14215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 36702772 - 36702881
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||||| ||||| |||||| || ||||| ||||   | ||||||||||||||||||||||||||||||    
T  36702772 ggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgtt 36702871  T
Q  146 tactgttttg 155  Q
    |||| |||||    
T  36702872 tactattttg 36702881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 14107827 - 14107955
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||| |||||| || |||||||||||  | ||||  ||||||| || || ||||| ||||    
T  14107827 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14107926  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
     || ||||||||| |||||||||||||||    
T  14107927 caccgttttggtcctctccgttagttttt 14107955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 14417784 - 14417912
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||| |||||| || |||||||||||  | ||||  ||||||| || || ||||| ||||    
T  14417784 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14417883  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
     || ||||||||| |||||||||||||||    
T  14417884 caccgttttggtcctctccgttagttttt 14417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 36703073 - 36702949
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagt-tttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    |||||||||||||||||| ||| |||||||||||||| |  ||||| ||| || |||||| | ||||   | ||||||||||||||||||||||||||||    
T  36703073 aggcttaatacatcatttggtcccttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccg 36702974  T
Q  144 tttactgttttggtcttctccgtta 168  Q
    |||||| |||||||| | |||||||    
T  36702973 tttactattttggtcctttccgtta 36702949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 24495066 - 24495000
Alignment:
Q  152 tttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  24495066 tttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccacc 24495000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 27899280 - 27899182
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||||||||  || |||||||| |||||||||| || || |||||||| |||||||||| |||||||||||||||| | |||| ||||||||||||||    
T  27899280 taactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtcttatccgttagtttttaaccttaaatatctaaggtgaacca 27899182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 28325066 - 28325159
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattc 138  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||| | |||||| |||||||| ||||| || ||||||||||||||||| |||||    
T  28325066 aaggcttaatacatcatttggtc-cttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataagtattc 28325159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 35315273 - 35315199
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaa 190  Q
    ||||||||||||||||| | ||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  35315273 tcaatttggtcccataagtcttctgtcgtttactgttttagtcctctctgttagtttttaacatcaaatgtctaa 35315199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 18801209 - 18801382
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| ||||||||||||||  | ||||||||||||||||||||| |  | ||    
T  18801209 aggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatatacctctgt 18801308  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||     || || | || |||| ||||||||| ||||| ||||||||||||||| ||| |||||| ||||||    
T  18801309 ttaccaaaatgatcctttctgttaatttttaacagcaaatctctaaggtgaaccatatttcaaggtgatccacc 18801382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 24873695 - 24873590
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||| ||||||| |||| | ||||||||||||||  | ||||||||||||||||| | |||||||||||||  |||||||| | ||||||     
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgttt 24873596  T
Q  169 gttttt 174  Q
    ||||||    
T  24873595 gttttt 24873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 43931988 - 43931859
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||  ||||| ||||||||  |||||||| |||| | |||||||| || | | ||||||||||||||||||  ||||| | |    
T  43931988 aggcttaatacatcatttggttccttaatttattttttattttcactctggtcctctaactattaaacgtatcaatttggtcccataaaccttctgtcat 43931889  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| ||||||||  ||||||||||||||    
T  43931888 ttactattttggtcccctccgttagttttt 43931859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 43936262 - 43936133
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||  ||| ||| |||||||||||||| | ||||| |||||| | ||||||||||||  | | ||||||||| ||||| | ||||| |||    
T  43936262 aggcttaatatatagtttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgt 43936163  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    ||||| |||||||| |||||||||||||||    
T  43936162 ttactattttggtcctctccgttagttttt 43936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 22060458 - 22060582
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||| ||||||| ||| |||||||||||||  ||||| | |||||| | ||||||||||||  | |||||||||| ||| || | || |||||||    
T  22060458 ggcttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgccgtt 22060557  T
Q  146 tactgttttggtcttctccgttagt 170  Q
    |||| |||||||| |||||||||||    
T  22060558 tactattttggtcatctccgttagt 22060582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 132122 - 131967
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||| ||  ||| |||||||||||||   || ||| |||||| || ||||||| |||  | || |||||||||||||| | |||  |||    
T  132122 aaggcttaatacatccttaggtcccttaacttattttattttctcagtttggtcccttaactattaagtgtgtcgatttggtcccataagtcttcctccg 132023  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||||  | || || |||||||||||||||||| | |||||||||||||||||||    
T  132022 tttactaatgtgatcatctccgttagtttttaaccttaaatgtctaaggtgaacca 131967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 7148181 - 7148055
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||| ||  ||| ||| |||||||||||||  ||||||| ||||||   ||||||||||||  ||||||||||||||| ||||| || || |    
T  7148181 aaaggcttaatatatt-tttcgtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtc 7148083  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    |||||||||||||||  |||||||||||    
T  7148082 gtttactgttttggttctctccgttagt 7148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 18802508 - 18802417
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattct 139  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| |||| | ||||||||||||||  | ||||||| ||||||||||| ||||    
T  18802508 cttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttct 18802417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 46457062 - 46457177
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||| ||| ||  |||||||||||||| ||||||| |||| | || |||||||||||  | ||||||||||||||||||| |||| ||    
T  46457062 aaaggcttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatcttcttcc 46457161  T
Q  143 gtttactgttttggtc 158  Q
     |||||  ||||||||    
T  46457162 atttaccattttggtc 46457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 19848933 - 19848783
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||| | ||||| |||||| || |||||||||||  | ||||||||||||||||||||| |  ||||||||     || || | || |||    
T  19848933 cttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatatacctccgtttacccaggtgatcctttctgtt 19848834  T
Q  168 agtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | ||||||||| ||||| ||||||||||||||| ||| |||||| ||||||    
T  19848833 aatttttaacagcaaatctctaaggtgaaccatatttcaaggtgatccacc 19848783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 45721865 - 45721759
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||||||||||| |||||| ||||||||||||||  | |||||||||| |||||| | |||  |||||||||  | || || ||||||||    
T  45721865 cttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgtttactaatgtgatcctctccgtt 45721766  T
Q  168 agttttt 174  Q
    |||||||    
T  45721765 agttttt 45721759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 33458302 - 33458430
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| |||  ||||||||||||| ||||||| |||||| |  |||||||||||  | |||| || ||||||||| | |||| ||    
T  33458302 aaaggcttaatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttcc 33458400  T
Q  143 gtttactgttttggtcttctccgttagttt 172  Q
    |||||||  | ||||| |||||||||||||    
T  33458401 gtttactaatgtggtcctctccgttagttt 33458430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 35484376 - 35484259
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccat 200  Q
    ||||||||||| |||||||||| ||||||||| | ||||||| ||  || ||||||||  || ||||||||||||||   |||||||||||||||||||     
T  35484376 taactataaagtatttcaatttagtcccataactcttctgccattacctattttggtccacttcgttagtttttaaccctaaatgtctaaggtgaaccaa 35484277  T
Q  201 gtttaaaggtggtccacc 218  Q
      ||| ||||||||||||    
T  35484276 cattataggtggtccacc 35484259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 41126231 - 41126356
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| ||||||||||||| || ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | ||||| |    
T  41126231 aaaggcttaatacatgctttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtc 41126330  T
Q  143 gtttactgttttggtcttctccgtta 168  Q
    |||  || |||||||| |||||||||    
T  41126331 gttacctcttttggtcctctccgtta 41126356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 44114777 - 44114649
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||| |||| ||||||||  || ||||  ||||||| || || |||| | ||    
T  44114777 aggcttaatacatcatttggtcccttaacttatttttagttttcattttggtcccct-actataaaatatctcaaactggtcccttatatcttctactgt 44114679  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
       || |||||||| |||||||||||||||    
T  44114678 cacctcttttggtcctctccgttagttttt 44114649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 83 - 218
Target Start/End: Original strand, 26406157 - 26406292
Alignment:
Q  83 gttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaa 182  Q
    ||||||| |||| | || |||| ||||||  | |||||||| || ||||| | ||||||||||||   |||||||| ||||||||| |||||||| | ||    
T  26406157 gttttcaatttgatcccataacgataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttattttttaaccttaa 26406256  T
Q  183 atgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||||||||||||  |||  ||||||||||||    
T  26406257 atgtctaaggtgaaccaactttgtaggtggtccacc 26406292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 48672899 - 48672772
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||||||| |||| ||||||||| |||||||| ||||| | ||||||||| | | | |||||  | |||||||||||||||||||    || |    
T  48672899 aaaggcttaatacattatttggtctcttaatttattttttgtttttaatttggttccattattgtaaagtgtctcaatttggtcccataaatcgcgtgtc 48672800  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
    ||||||| |||| ||| |||||||||||    
T  48672799 gtttactattttagtcctctccgttagt 48672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 43935202 - 43935288
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgtttt 154  Q
    |||||||||||||| | ||||| |||||| | ||||||||||||  | ||||||||||| ||||||| |||||||||||||| ||||    
T  43935202 cttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 7146775 - 7146898
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||| ||||||||| ||| ||| || ||||||||||  ||||||| |||||| ||||||||||||||  |||||||||||| || ||||| || || | |    
T  7146775 aggcctaatacatcgtttggtccct-aacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggt-ccttaaatcttatgtcat 7146872  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    |||||||||||||| ||||| |||||    
T  7146873 ttactgttttggtcctctccattagt 7146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 43007771 - 43007646
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||| ||||||| |||  | |||||||||||  |||||| |||||| | ||||||||||||  | ||||||||||||||||| | || || |||    
T  43007771 aggcttaatatatcatttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgt 43007672  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||||| |||| ||  |||||||||||    
T  43007671 ttactattttagttctctccgttagt 43007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 46673512 - 46673608
Alignment:
Q  73 cttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagt 170  Q
    ||||||||| ||||||| |||||| ||||||| ||||||  ||||||||||||||||||||| || || |||||||| | |||||| ||||| |||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtcctctccattagt 46673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 41514991 - 41515077
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||| ||||||| ||| ||||| |||||||| ||||| | ||||||||| |||||||||||  |||||||||||||||||||    
T  41514991 aaggcttaatatatcattt-gtcccttaatttatttttggttttaattttggttcc-taactataaagtgtttcaatttggtcccataa 41515077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 7347344 - 7347213
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| ||||||||| |||||| ||| | ||||||||| ||| |||||||  | |||||||||||| |||||| || || |    
T  7347344 aaaggcttaatacatgctttggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaatttggtcctataaatcttatgtc 7347245  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||  ||||  || |||||||||| ||||    
T  7347244 gtttaccattttaatcctctccgttagatttt 7347213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 17288341 - 17288255
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||| ||||| ||| ||| |||||||||||||| ||||| | |||||| ||||||||||||||  | |||||||||||||||||    
T  17288341 aggcttaa-acatcgtttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataa 17288255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 30222640 - 30222767
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||  ||| |||  |||| |||||||| | ||||| |||||| |||||| ||||||| || ||||||||||||| ||  | ||||| |||    
T  30222640 aggcttaatacatgctttggtcctttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgt 30222739  T
Q  145 ttactgttttggtcttctccgttagttt 172  Q
    |  || |||||||| |||||||||||||    
T  30222740 tacctcttttggtcctctccgttagttt 30222767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 24871986 - 24872135
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||| ||| ||| |||||||| |||||  |||||| |||||| | |||||||||||  || || |||||||| ||||| | || | |||||    
T  24871986 ggcttaatacatcgttttgtcacttaacttttttttttttttcattttggtccactaactataaa-tatctctatttggtctcataagtctttttccgtt 24872084  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
    |||  ||||| || | |||||| ||||||||| | ||||||||| ||||||    
T  24872085 taccattttgatcctttccgtttgtttttaaccttaaatgtctatggtgaa 24872135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 25532138 - 25532243
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||||||||||||  ||  ||||||||||||| |||| || |||||| ||||||||||||||  |||| |||| ||| ||||||| || |||     
T  25532138 aaaggcttaatacatcatttgatcctttaacttattttttgttt-caatttggtcccctaactataaagtgtttcgatttagtctcataaatcttttgca 25532236  T
Q  143 gtttact 149  Q
    |||||||    
T  25532237 gtttact 25532243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 177
Target Start/End: Complemental strand, 34558425 - 34558291
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||| ||||||||||  ||| ||| |||||||||||||  | ||||| |||||| |||||||||||||| || ||||||||||||| ||  | || ||||    
T  34558425 aaagacttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcccttatgtcttttgcc 34558326  T
Q  143 gtttactgttttggtcttctccgttagtttttaac 177  Q
    |||  || |||||||| | |||||||  |||||||    
T  34558325 gttacctcttttggtcctatccgttacattttaac 34558291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 38002635 - 38002553
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  ||| ||||||||||||||||| || ||||| |||||| || |||||||||||  | |||||||||||||    
T  38002635 ggcttaatacatgctttggtctcttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtccc 38002553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 47163170 - 47163276
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    ||||| |||||||| | ||| | |||||| | ||||||||||||    | ||||||||||||||||| || | ||||||||| |||||||| ||||||||    
T  47163170 cttaatttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgtt 47163269  T
Q  168 agttttt 174  Q
    |||||||    
T  47163270 agttttt 47163276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 30224100 - 30223971
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||| ||||||||||  ||| ||| |||||||||||||  | ||||| |||||| |||||||||||||   | ||||||||||||| ||  | |||||||    
T  30224100 aaagacttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtcccttatgtcttctgcc 30224001  T
Q  143 gtttactgttttggtcttctccgttagttt 172  Q
    |||   | |||||||| |||||||||||||    
T  30224000 gttacatcttttggtcctctccgttagttt 30223971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 48671076 - 48671192
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||| ||||||||| |||||||| ||||| | |||| |  | ||||||||||| || |||||||| | |||||||| || ||||||||||    
T  48671076 ttaatacatcatttggtctcttaatttatttttggtttttaatttgatctcttaactataaagtatctcaatttgat-ccataaatcttatgccgtttac 48671174  T
Q  149 tgttttggtcttctccgt 166  Q
    | ||| |||  |||||||    
T  48671175 tatttcggttctctccgt 48671192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 10338436 - 10338348
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| ||| |||||||||||||||||    
T  10338436 aaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccatctcaatttggtcccataa 10338348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 38408399 - 38408283
Alignment:
Q  42 gaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgc 141  Q
    ||||| ||||||| ||||||| ||| ||||| ||||||||  ||||||||||||| | ||||||||||||  | |||| |||||||| ||  | ||||||    
T  38408399 gaaagacttaatatatcatttggtcccttaatttatttttgattttcactttggtcctctaactataaagtgtctcaaattggtcccttatgtcttctgc 38408300  T
Q  142 cgtttactgttttggtc 158  Q
    ||||  || ||||||||    
T  38408299 cgttatctattttggtc 38408283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 4973507 - 4973558
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggt 96  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||| ||||||    
T  4973507 aggcttaatacattatttagtcccttaacttattttcagttttcaatttggt 4973558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 13287060 - 13286965
Alignment:
Q  101 taactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
    ||||||| |||  ||||||||||||||| ||  | || ||| ||||||| |||||||| ||| |||||||||||||| | ||||||||||| ||||    
T  13287060 taactattaagtgtttcaatttggtcccttatgtcttatgctgtttactattttggtcctcttcgttagtttttaaccttaaatgtctaagatgaa 13286965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 35127836 - 35127927
Alignment:
Q  77 tttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||| ||||| | |||||||| |||||||||||   | ||||||| ||||||||||| || ||||||||||| |||||||| ||| |||||    
T  35127836 tttttggttttaaatttggttctctaactataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtcatcttcgtta 35127927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 41127293 - 41127211
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    |||||||||||||  |||  || |||||||||||||  | ||||| |||||| |||||||||||||| || ||||||||||||    
T  41127293 aggcttaatacatgctttgatcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcc 41127211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 41616619 - 41616701
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | |||||||||||||    
T  41616619 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 41616701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 45719633 - 45719763
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    |||| ||||||||  |||||| |||| | ||||||||||||||  | | ||||||||| ||||| | |||||  ||||||  ||||||| || | ||| |    
T  45719633 ttaatttatttttgattttcagtttgatcccctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggtttttttcgtca 45719732  T
Q  169 gtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||||||||  |||||||||||||| ||||    
T  45719733 gtttttaacactaaatgtctaaggtggacca 45719763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 17287083 - 17287168
Alignment:
Q  60 tttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||| ||||||||||| |||| ||||| |||||| |||||||| ||||   ||||||||||||||| ||| ||| | ||||||    
T  17287083 tttagtcccttaacttattattagatttcaatttggtcccctaactttaaactgtttcaatttggtcccctaagtatacagccgtt 17287168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 29658734 - 29658673
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||||||||||||||| |||  ||||||||||||||||||||| ||| || | ||||||||    
T  29658734 ggcttaatacatcatttggtcatttaacttatttttagttttcaatttagtcctctaactat 29658673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 41618619 - 41618494
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||  ||| ||| |||||||||||||| | ||||| |||||| |||||| |||||||  | | ||||||||||  ||  | ||||| ||||     
T  41618619 gcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgtta 41618520  T
Q  147 actgttttggtcttctccgttagttt 172  Q
     || |||||||| |||||||||||||    
T  41618519 cctcttttggtcctctccgttagttt 41618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 28326510 - 28326383
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||| ||||  || ||||| |||||||| ||||| | ||||||  ||| |||||||||  | |||||||||| | |||| | |||  |||||    
T  28326510 ggcttaatacattatttgatcccttaatttatttttggtttt-attttggtctcctgactataaagtgtctcaatttggttctataagtcttcctccgtt 28326412  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    |||| || ||||| |||||||||||||||    
T  28326411 tactattgtggtcctctccgttagttttt 28326383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 35128281 - 35128233
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggt 96  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| ||||||    
T  35128281 cttaatacatcatttggtcccttaacttatttttggttttcaatttggt 35128233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 36673959 - 36673831
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  ||| ||| |||||||||||||  | ||| | |||||| |||||||||||||   | ||||||||||||| ||  | ||||| ||    
T  36673959 aaggcttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcg 36673860  T
Q  144 tttactgttttggtcttctccgttagttt 172  Q
    ||  || |||||||| |||| ||||||||    
T  36673859 ttacctcttttggtcctctcagttagttt 36673831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 48754015 - 48754119
Alignment:
Q  70 taacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttag 169  Q
    |||||||||||||| ||| | |||||| || ||| |||||||  ||||||||| |||| |||||| || || |||||||  |||| ||| ||||||||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgttag 48754114  T
Q  170 ttttt 174  Q
     ||||    
T  48754115 atttt 48754119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 1885363 - 1885280
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||| ||||||| || |||||||||||||    
T  1885363 aggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtatctcaatttggtccc 1885280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 33341291 - 33341374
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    |||||||||||||| |||| |||||||||||||||||| | ||| | ||||||  | ||||||||||   | ||||||||||||    
T  33341291 aaggcttaatacatgatttggtctcttaacttatttttggattttattttggtctcataactataaattgtctcaatttggtcc 33341374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 34557392 - 34557523
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||  |||||||||||||  | ||| | |||||| ||||||||||||||  | ||||||||||||| ||  | || |||||||    
T  34557392 ggcttaatacatgctttggttccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgtt 34557491  T
Q  146 tactgttttggtcttctccgttagtttttaac 177  Q
    || | |||||||| | |||||||  |||||||    
T  34557492 tattcttttggtcatatccgttacattttaac 34557523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 40501577 - 40501490
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||  ||||||| ||||||||||||||   ||||| |||||| || ||| | |||| | | |||||||||||||||||    
T  40501577 aggcttaatacatgctttagtcccttaacttatttttgaatttcattttggtcccttaattttaaaccgtctcaatttggtcccataa 40501490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 47809484 - 47809571
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||  ||| ||| ||||| ||||||||   ||||| ||||||||| ||||| |||| | | |||||||||||||||||    
T  47809484 aggcttaatacatgctttggtcccttaatttatttttgaatttcattttggttccttaactttaaaccgtctcaatttggtcccataa 47809571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 43704603 - 43704689
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  43704603 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 43704689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 25533149 - 25533108
Alignment:
Q  356 atcaacacattcatactccttagtcaattttcatataaccca 397  Q
    |||| |||||||||||| |||||||||| |||||||||||||    
T  25533149 atcatcacattcatacttcttagtcaatcttcatataaccca 25533108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 26406339 - 26406376
Alignment:
Q  253 aaaaagagaaccgttggatcatataagtatgttgtatc 290  Q
    ||||||||||||||||||||||||| || |||||||||    
T  26406339 aaaaagagaaccgttggatcatatatgtctgttgtatc 26406376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 32610676 - 32610765
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| ||||||||||||||   ||||| |||| | || ||||| |||| | | |||||||||||||||||    
T  32610676 aaaggcttaatacatgctttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 32610765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 35480200 - 35480284
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||||  ||| ||| |||||||||||||  | ||||| ||||| |||||||||||||||  | ||||||| |||||    
T  35480200 aaaggcttaatacatgctttggtcccttaacttattttcggatttcattttgg-tccctaactataaagtgtctcaatttagtccc 35480284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 29656981 - 29657045
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||||||||| ||   ||| ||| ||||||||||||| |||||||| |||||| ||||||||||    
T  29656981 aaaggcttaatccacattttggtcccttaacttattttcagttttcaatttggtcccctaactat 29657045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 56819 - 56649
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||| ||||||| ||| |||||||||||||| | |||||||||||| |||||| |||||||  | |||||||||||| |||||| ||||||||||||    
T  56819 cttaataaatcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgttta 56720  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||| | || ||||  ||||||||||||||||||| |||||||  ||| |||||||||| |||||||||    
T  56719 ctgtttagatcctctctattagtttttaacatcaaatatctaagggaaactatgtttaaagatggtccacc 56649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 218
Target Start/End: Complemental strand, 19525412 - 19525237
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||  | || |||||||| ||||| | |||||||    
T  19525412 aaaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgcc 19525313  T
Q  143 gtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||  |||||||| |||||||| ||||||||| | |||| |||| |||||||||  |||| | ||||||||||    
T  19525312 gtttaccattttggtcctctccgtttgtttttaaccttaaatttctatggtgaaccaactttatatgtggtccacc 19525237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 5382936 - 5383109
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||  ||||||  ||||| |||||||  | ||||||||||||||||||| ||  | |||    
T  5382936 aggcttaatacatcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgt 5383035  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||| ||||| || |||||||||||||||||| | |||||||||||||||| ||  |||| ||||||||||||    
T  5383036 ttactattttgatcctctccgttagtttttaaccttaaatgtctaaggtgaatcaactttataggtggtccacc 5383109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 18677971 - 18678084
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||||| | ||||||||||||||  | ||||||||||||||||||| ||||| ||||    
T  18677971 ggcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtt 18678070  T
Q  146 tactgttttggtct 159  Q
    ||| ||||||||||    
T  18678071 taccgttttggtct 18678084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 21387631 - 21387804
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||   ||| ||| ||||||||||||||   ||||| |||||| |||||||||||||   | ||||||||||||||||||| |||||||||    
T  21387631 aggcttaatacaagctttggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgt 21387730  T
Q  145 ttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  || |||||||| | || |||||||||||||||||||  ||||||||||| ||| |||||||||||| ||||    
T  21387731 tacctcttttggtcctgtctgttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggttcacc 21387804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 1663180 - 1663304
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||||||| | |  |||||||||||  | | |||||||||| |||||| ||||||||    
T  1663180 aaggcttaatacatcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccg 1663279  T
Q  144 tttactgttttggtcttctccgtta 168  Q
    |||||| ||||||||||||||||||    
T  1663280 tttactattttggtcttctccgtta 1663304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 19827261 - 19827149
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||| |||||||  | ||||||||||||||||||| |||| |||||    
T  19827261 ggcttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgtt 19827162  T
Q  146 tactgttttggtc 158  Q
    |||  ||||||||    
T  19827161 taccattttggtc 19827149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 12936226 - 12936095
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||  | |||||||||||| |||| | || |||     
T  12936226 aaaggcttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgct 12936127  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||  |||||||| | |||||| ||||||    
T  12936126 gtttaccattttggtcatttccgtttgttttt 12936095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 5384469 - 5384339
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||||| ||  ||||| ||||||||  |||||| |||| | ||||||||||||||  | ||||||||||||||||||| |||  |||    
T  5384469 aaggcttaatacatcatttggttccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccg 5384370  T
Q  144 tttactgttttggtcttctccgttagttttt 174  Q
    |||||| |||||||| |||||||||||||||    
T  5384369 tttactattttggtcctctccgttagttttt 5384339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 40058032 - 40058166
Alignment:
Q  65 tctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctcc 164  Q
    ||||||||||||||||| ||||||| |||| | || ||||||| |||  |||||| |||||| ||||| | |||||||||||||  |||||||| |||||    
T  40058032 tctcttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctcc 40058131  T
Q  165 gttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||||||||||  | |||||||||||||||||||    
T  40058132 gttagtttttaatcttaaatgtctaaggtgaacca 40058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 42510147 - 42510257
Alignment:
Q  84 ttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaa 183  Q
    |||||| |||||| || |||||||||||  | ||||||||||||||||||| |||||||||||||| |||||||  |||||||||||||||||| |||||    
T  42510147 ttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaa 42510246  T
Q  184 tgtctaaggtg 194  Q
    |||||| ||||    
T  42510247 tgtctatggtg 42510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 27894142 - 27894033
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||| ||| ||| |||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||| ||||||| ||| | ||||||    
T  27894142 cttaatacatcgtttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgttta 27894043  T
Q  148 ctgttttggt 157  Q
    || |||||||    
T  27894042 ctattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 10085969 - 10085842
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| |||||||||||||| ||| ||||||||||||||   ||||||||||||  | ||||| |||||  ||||||||||||||||||||| ||||||     
T  10085969 aaaggtttaatacatcatttggtcccttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataaatcttctgct 10085870  T
Q  143 gtttactgttttggtcttctccgttagt 170  Q
     |||||| |||||||| |||||||||||    
T  10085869 atttactattttggtcctctccgttagt 10085842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 207
Target Start/End: Complemental strand, 7345511 - 7345350
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  |||  || ||||||||||||||   ||||| |||||| | ||||||||||||  | |||||||||||||||||||||| || ||||    
T  7345511 ggcttaatacatgttttgatcccttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgtt 7345412  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaa 207  Q
      || |||||||| |||  | |||||||||||||||||  ||||||||||||||| ||||||    
T  7345411 atctcttttggtcctctatgatagtttttaacatcaaaactctaaggtgaaccatatttaaa 7345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 18693696 - 18693865
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||  ||| ||| ||||||||||||||   ||| | |||||| || ||||||||||   | ||||| ||||||||||||| ||||| ||||  |    
T  18693696 ttaatacatgttttggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacc 18693795  T
Q  149 tgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    | |||||||| |||| |||||||||||||||||||  ||||||||||||||| | |||||||||| ||||    
T  18693796 tcttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatataaaggtggttcacc 18693865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 2167567 - 2167464
Alignment:
Q  114 tttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggt 213  Q
    ||||||||||||||||||||| |||||||||||| | |||||||| |||| ||||||||||||| | |||||||||||||||||||  |||| || ||||    
T  2167567 tttcaatttggtcccataaatcttctgccgtttattattttggtc-tctctgttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggt 2167469  T
Q  214 ccacc 218  Q
    |||||    
T  2167468 ccacc 2167464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 223223 - 223374
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttc-actttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    |||||| ||| ||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||  | | ||||||||||||||| | |||  |||||||    
T  223223 ttaatatatcgttttgtcccttaacttatttttagttttccactttggtcccctaactataaagtgtattaatttggtcccataagtcttcctccgttta 223322  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||  | ||||| | ||| |||||||||||  | |||||||||||||||||||    
T  223323 ctaatgtggtcctttccattagtttttaatcttaaatgtctaaggtgaacca 223374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 12950384 - 12950253
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||| |||||| ||||||||||||||  | |||||||||||| |||| | || ||      
T  12950384 aaaggcttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgat 12950285  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||  |||||||| | |||||| ||||||    
T  12950284 gtttaccattttggtcatttccgtttgttttt 12950253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 1273086 - 1273212
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||||||| ||| ||||| |||||||| ||||||| |||||| |  ||||||||||   | ||||||||||||||||||| |||||| |||||    
T  1273086 cttaatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagttta 1273185  T
Q  148 ctgttttggtcttctccgttagttttt 174  Q
    |  ||||||||  ||||||||||||||    
T  1273186 caattttggtcccctccgttagttttt 1273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 26403300 - 26403424
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||||| |||||  |||||||||||||  |||||| |||||| || |||||||||||  | |||||||| || ||||||| || || ||    
T  26403300 aaggcttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcg 26403399  T
Q  144 tttactgttttggtcttctccgtta 168  Q
    |||||| ||||||||||||| ||||    
T  26403400 tttactattttggtcttctctgtta 26403424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 42979440 - 42979564
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||||||||||||| ||||  || ||||  |||||||| | ||||| |||||| | ||||||||||||  |||||||||||||| |||| | |||||||    
T  42979440 aaaggcttaatacataatttgatcccttagtttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgcc 42979539  T
Q  143 gtttactgttttggtcttctccgtt 167  Q
    ||||||| |||||||| ||||||||    
T  42979540 gtttactattttggtcctctccgtt 42979564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 12933748 - 12933918
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| |||| | ||||||||||||||  | |||||||| || ||||| | ||||||||||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgttta 12933847  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  ||| |||| | ||||||  |||||||| | |||| |||| | |||| ||  |||| ||||| ||||||    
T  12933848 ccatttcggtcctttccgtttatttttaaccttaaatatctatgatgaatcaactttataggtgatccacc 12933918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 15613522 - 15613628
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||| | ||||| ||||||   ||||||||||||  | ||||||||||||||||||| |||| ||||||||| |||||||| ||||||||    
T  15613522 cttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtt 15613621  T
Q  168 agttttt 174  Q
    | |||||    
T  15613622 aattttt 15613628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 22812505 - 22812380
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||| ||| ||||||||||||||  |||||| ||| || || ||||||||||   | ||| |||| |||||||||| |||||| ||||||    
T  22812505 ttaatacatcatttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttac 22812406  T
Q  149 tgttttggtcttctccgttagttttt 174  Q
    | ||||||||  ||||||||||||||    
T  22812405 tattttggtcccctccgttagttttt 22812380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 38471307 - 38471452
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    |||||||||||||   ||||| |||||| || ||||| ||||   |||||||||||| |||||||| |||| ||||||||| |||||||  |||| ||||    
T  38471307 ttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctctgtta 38471406  T
Q  169 gtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtc 214  Q
     |||||||| | |||||| ||||||||||||  |||| ||||||||    
T  38471407 atttttaaccttaaatgtttaaggtgaaccaactttataggtggtc 38471452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 15615083 - 15614955
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||| |   ||| ||| |||| ||||||||| | ||||| |||||| | ||||||||||||  | |||||||||| |||||||| ||||||||    
T  15615083 aaggcttaatataggttttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccg 15614984  T
Q  144 tttactgttttggtcttctccgttagttt 172  Q
    |||||| |||||||| |||| ||||||||    
T  15614983 tttactattttggtcctctctgttagttt 15614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 19523978 - 19524105
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||| ||||||| ||| |||||||||||||| ||||||| |||||| || |||||||||||  | |||||||||| | |||||| ||||| ||||    
T  19523978 ggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggt-ctataaattttctgtcgtt 19524076  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    |||  |||||||| | |||||| ||||||    
T  19524077 taccattttggtcatgtccgtttgttttt 19524105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 41905167 - 41905234
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaa 110  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| |||||||||||||    
T  41905167 aaaggcttaatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactataaa 41905234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 6629725 - 6629791
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaag 111  Q
    |||||||||||||||||| ||| |||||||||||| | |||||||||||||| ||||||||||||||    
T  6629725 aggcttaatacatcatttggtcccttaacttatttgtggttttcactttggtcccctaactataaag 6629791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 7426706 - 7426808
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcc 215  Q
    ||||| |||| |||||| | | ||||| |||||||||||  || | ||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  7426706 tcaatatggttccataagtctactgccatttactgttttattcctttccgtcaatttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtcc 7426805  T
Q  216 acc 218  Q
    |||    
T  7426806 acc 7426808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 4568100 - 4567964
Alignment:
Q  41 agaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctg 140  Q
    |||||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | |||||    
T  4568100 agaaaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctg 4568001  T
Q  141 ccgtttactgttttggtcttctccgttagtttttaac 177  Q
    || ||  || |||||||| |||||||||  |||||||    
T  4568000 cctttacctattttggtcatctccgttacattttaac 4567964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 12863039 - 12862867
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||  |  |||||||||||||||||   || ||| |||| | || ||||||| |||  | |||||||||||| |||| | |||||| |||    
T  12863039 ggcttaatacatctctcggtctcttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtt 12862940  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||| |||||||| ||||||||| ||||||||   |||| ||| ||||||||||   ||| ||||||||||||    
T  12862939 tactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaaccaacattataggtggtccacc 12862867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 224714 - 224583
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| |||||||||||| | ||| |||||||||||||  ||||||| |||||| ||||||||||||||  | ||||||||||| ||||| | |||  ||    
T  224714 aaaggtttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctcc 224615  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    | |||||  | | ||| |||||||||||||||    
T  224614 gattactaatgtagtcatctccgttagttttt 224583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 22819564 - 22819485
Alignment:
Q  120 tttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    ||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||   | || ||||||||||||||    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagtttttaaccctatatatctaaggtgaacca 22819485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 15857717 - 15857611
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||   || ||| |||||| || |||||||||||  |||||||||| |||||||||| || || |||||||  |||||||| ||||||||    
T  15857717 cttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgtt 15857618  T
Q  168 agttttt 174  Q
    |||||||    
T  15857617 agttttt 15857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 328277 - 328212
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataa 109  Q
    |||||||||||||||||||  || |||||||||||||| ||||||| |||||| ||||||||||||    
T  328277 aaggcttaatacatcatttgatcacttaacttattttttgttttcaatttggtcccctaactataa 328212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 194
Target Start/End: Complemental strand, 5977194 - 5977046
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaa--gcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||| |||| ||| ||||| |||||||| ||||| | || ||| |||||||||||||  |  | ||||||||||||||||| |||||  |||||    
T  5977194 cttaatacattatttggtcccttaatttattttttgttttaatttgggtcccctaactataaagtgtgtctcaatttggtcccataagtattcatccgtt 5977095  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtg 194  Q
    ||||  | ||||| | || ||||||||||||  | ||||||||||||||    
T  5977094 tactaatgtggtcctttctgttagtttttaatcttaaatgtctaaggtg 5977046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 168
Target Start/End: Complemental strand, 8762520 - 8762399
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||| ||| ||| ||| ||||||||||||||| |||||| |||||| || | ||||||||   | ||||||||||| ||||||| || || |||||    
T  8762520 gcttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgttt 8762421  T
Q  147 actgttttggtcttctccgtta 168  Q
    ||| |||| ||| |||||||||    
T  8762420 actattttagtcctctccgtta 8762399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 15510387 - 15510258
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| |||||||||||||  | ||||| |||| | ||||||||||||||  | ||||||||||||| ||  | |||||||    
T  15510387 aaaggcttaatacatgctttggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgcc 15510288  T
Q  143 gtttactgttttggtcttctccgttagttt 172  Q
    |||  || |||||||| |||| ||||||||    
T  15510287 gttacctcttttggtcctctctgttagttt 15510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 12831059 - 12830887
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    |||||||||||||  |  ||| |||||||||||||   || ||| |||| | || ||||||| |||  | |||||||||||| |||| | |||||| |||    
T  12831059 ggcttaatacatctctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtt 12830960  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||| |||||||| ||||||||| ||||||||   |||| ||| ||||||||||   ||| ||||||||||||    
T  12830959 tactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaaccaacattataggtggtccacc 12830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 19825868 - 19826000
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| |||| | ||||||||| ||| | | ||||  ||||||  || |||||||  |||    
T  19825868 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactaaaaaacgtctcaaactggtcctttatatattctttcgt 19825967  T
Q  145 ttactgttttggtcttctccgttagtttttaac 177  Q
    |  || ||||||||   ||||||||||||||||    
T  19825968 tgcctattttggtcaaatccgttagtttttaac 19826000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 24805285 - 24805349
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataa 109  Q
    |||||||||||||||||| |||||||||||||||||| ||||| | |||||  ||||||||||||    
T  24805285 aggcttaatacatcatttggtctcttaacttatttttggtttttattttggccccctaactataa 24805349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 32734198 - 32734277
Alignment:
Q  118 aatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaac 197  Q
    ||||||||||||||| | ||||| |||||||| |||||||| | |||||||||||||||  | |||| ||||||||||||    
T  32734198 aatttggtcccataactcttctgtcgtttactattttggtcatttccgttagtttttaatcttaaatatctaaggtgaac 32734277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 40059448 - 40059321
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||| || |||| ||| |||||||||||||| ||||||| |||| | |||||||||| |||  ||| || ||||||| |||| | |||||||||||    
T  40059448 gcttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgttt 40059349  T
Q  147 actgttttggtcttctccgttagttttt 174  Q
    |   |||||||  ||||||||| |||||    
T  40059348 atcattttggtgatctccgttaattttt 40059321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 12947909 - 12948079
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||| ||||||||||| ||||||||||||||  |||||| |||| | ||||||||||||||  | |||||||| || ||||| | || || ||||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgttta 12948008  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |  ||| |||| | ||||||  |||||||| | |||| |||| | |||| ||  |||| ||||| ||||||    
T  12948009 ccatttcggtcctttccgtttatttttaaccttaaatatctatgatgaatcaactttataggtgatccacc 12948079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 18695765 - 18695640
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||  ||| ||| ||||| |||||||| ||||||| |||  | || |||||||||||  | ||||||||||||||||| | |||  ||||||||    
T  18695765 ttaatacatgctttggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttac 18695666  T
Q  149 tgttttggtcttctccgttagttttt 174  Q
    |  | ||||| |||||||||||||||    
T  18695665 taatatggtcatctccgttagttttt 18695640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 42980830 - 42980702
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  |||  ||| |||| |||||||||| ||||| |||||| |  |||||||||||  | ||||||||||| |||| || ||||||| ||    
T  42980830 ggcttaatacatgctttgatcttttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatt 42980731  T
Q  146 tactgttttggtcttctccgttagttttt 174  Q
    |||  |||||||| | ||||||| |||||    
T  42980730 taccattttggtcctttccgttaattttt 42980702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 5975748 - 5975879
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    ||||| |||||||||||||| |||  |||||||||||||  |||| | |||||| |||||| |||||||  | ||||||||||| ||||| | |||  |     
T  5975748 aaaggtttaatacatcatttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctct 5975847  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| || ||||  |||| ||||||||||    
T  5975848 gtttactattgtggttctctctgttagttttt 5975879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 6914934 - 6914847
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||| |||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  6914934 aggcttaatacatgatttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 6914847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 15509193 - 15509312
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||  ||| ||| |||||||||||||  | ||| | |||||| ||||||||||||||  | ||||||||||||| ||  | ||||||||||  |    
T  15509193 ttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacc 15509292  T
Q  149 tgttttggtcttctccgtta 168  Q
    | |||||||| |||||||||    
T  15509293 tattttggtcctctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 30916240 - 30916178
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||||||||||    
T  30916240 aggcttaatacatcatttggtcccttaacttattttatgttttcaatttagtcccctaactat 30916178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 38473645 - 38473548
Alignment:
Q  77 tttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| ||||| ||||||   |||||| |||||  | | ||||||||||||||||| ||||| |||||||| |||||||| | ||||||| |||||    
T  38473645 tttttagatttcattttggtcatctaactgtaaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaattttt 38473548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 1273463 - 1273383
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttgg 124  Q
    ||||||||||| ||| ||| ||| |||||||||||||| ||||||| |||||| || ||| |||||||  | |||||||||    
T  1273463 aaggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 5061022 - 5061105
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    |||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| ||||||  ||||||  | |||||||||||||    
T  5061022 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtccc 5061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 12952852 - 12952769
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||  ||| ||| |||||||||||||||  ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  12952852 ttaatacatgttttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12952769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 14356426 - 14356488
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    |||||||||||||| |||| ||| ||||||||||||| |||||||| |||||| | ||||||||    
T  14356426 aaggcttaatacattatttggtc-cttaacttattttcagttttcaatttggtcctctaactat 14356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 32780204 - 32780117
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  32780204 aggcttaatacatgttttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 32780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 42511771 - 42511660
Alignment:
Q  62 tagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttc 161  Q
    ||||| ||||| |||||||   |||||| |||||| || |||||||||||  | |||||||| | |||||||| ||||||||||| || ||||||   ||    
T  42511771 tagtcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttggctatc 42511672  T
Q  162 tccgttagtttt 173  Q
    |||||| |||||    
T  42511671 tccgttggtttt 42511660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 19050744 - 19050826
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||||  ||| ||| |||||||||||||| | ||||| |||||| |||||||| ||||   | |||||||||||||    
T  19050744 ggcttaatacatgttttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtccc 19050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 20988685 - 20988811
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  ||| ||| |||||||||||||    ||||| |||||| ||||||||||||||  | ||||||| ||| | ||  | || |||||||    
T  20988685 ggcttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctcttatgtcttgtgccgtt 20988784  T
Q  146 tactgttttggtcttctccgttagttt 172  Q
      || |||||||| |||||||||||||    
T  20988785 acctcttttggtcctctccgttagttt 20988811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 22819600 - 22819558
Alignment:
Q  116 tcaatttggtcccataaatattctgccgtttactgttttggtc 158  Q
    ||||||||||||||||| | |||||||||||||| ||||||||    
T  22819600 tcaatttggtcccataactcttctgccgtttactattttggtc 22819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 12938006 - 12937917
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  |||  || ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  12938006 aaaggcttaatacatgctttgatcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12937917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 26912437 - 26912308
Alignment:
Q  68 cttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtt 167  Q
    |||||||||||||| ||||||| ||||||| ||||| |||||||    | ||||| |||| |||| | ||||  |||||||  || |||||  ||| |||    
T  26912437 cttaacttattttttgttttcattttggtttcctaattataaagtgacttaatttagtcctataattcttctatcgtttacaattgtggtcccctctgtt 26912338  T
Q  168 agtttttaacatcaaatgtctaaggtgaac 197  Q
    | |||||||| | |||||||||| ||||||    
T  26912337 attttttaaccttaaatgtctaatgtgaac 26912308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 2472549 - 2472465
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||  ||| ||| ||||||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  2472549 cttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 2472465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 22650726 - 22650618
Alignment:
Q  69 ttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 168  Q
    ||||||||||||  | ||||| |||||| ||||||||||||||  | ||||||||||||| ||  | || |||||||  || |||||||| | |||||||    
T  22650726 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgtta 22650627  T
Q  169 gtttttaac 177  Q
      |||||||    
T  22650626 cattttaac 22650618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 32735528 - 32735476
Alignment:
Q  118 aatttggtcccataaatattctgccgtttactgttttggtcttctccgttagt 170  Q
    ||||||||||||||| | |||||||||||| | |||||||| |||| ||||||    
T  32735528 aatttggtcccataactcttctgccgtttattattttggtcatctctgttagt 32735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 33362691 - 33362627
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactat 107  Q
    ||||| |||||| ||||||| ||| |||||||||||||| ||||| | |||||| | ||||||||    
T  33362691 aaaggtttaatatatcatttggtcccttaacttattttttgtttttaatttggtcctctaactat 33362627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 40020 - 39850
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    |||||||||| |||| |||||||||||||||||| | |||||||||||| |||||| |||||||  | ||||||||||||||||||| |||   | ||      
T  40020 cttaatacattatttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttcccacattac 39921  T
Q  148 ctgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    || |||||||| |||| ||||||||||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  39920 ctcttttggtcctctctgttagtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggttcacc 39850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 22125 - 22250
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    |||||||||||||||  || |||| |||||||||  ||||||||||| | | |||||||||||   | |||||||| || ||||||| ||||| ||||||    
T  22125 cttaatacatcatttgatcccttaccttatttttgattttcactttgat-ctctaactataaaatgtctcaatttgttcacataaatcttctgtcgttta 22223  T
Q  148 ctgttttggtcttctccgttagttttt 174  Q
    || |||||||| ||||||||| |||||    
T  22224 ctattttggtcatctccgttaattttt 22250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 13320 - 13153
Alignment:
Q  51 aatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttactg 150  Q
    |||||||||| |  || |||||||||||||| ||||||| |||||| |||||||||||||   | ||||||| ||||||||| | |||| |||||  ||     
T  13320 aatacatcatatgatcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctc 13221  T
Q  151 ttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||||| | ||| |||| |||||||||||||||||||||||||||||| ||||||| |||||||||    
T  13220 ttttggtcctatccattaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccacc 13153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 11695 - 11829
Alignment:
Q  40 gagaaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattct 139  Q
    |||| |||| ||||||||| ||| ||| ||||||||||||||  |||||| ||| || |||||| |||||||  ||||||||||||||| ||  | ||||    
T  11695 gagataggcgtaatacatcgtttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttct 11794  T
Q  140 gccgtttactgttttggtcttctccgttagttttt 174  Q
     | |||  || |||||||| |||||||||||||||    
T  11795 ccagttacctattttggtcctctccgttagttttt 11829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 47066 - 47215
Alignment:
Q  47 gcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttt 146  Q
    |||||||||||||||| ||| ||||||||||||||   ||||| |||| | || ||||| ||||   | ||||||||||||||||||| |||| ||||||    
T  47066 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 47165  T
Q  147 actgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaa 196  Q
    ||| |||||||| ||||||||| |||||||| | ||||||||||||||||    
T  47166 actattttggtcctctccgttaatttttaactttaaatgtctaaggtgaa 47215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 48574 - 48449
Alignment:
Q  49 ttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtttac 148  Q
    |||||||||||||| ||| |||||||||||||| | ||||| |||||| |  |||||||||||  | |||||||| ||||||||||||||||||||||||    
T  48574 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttac 48475  T
Q  149 tgttttggtcttctccgttagttttt 174  Q
    | |||||||| ||||||||| |||||    
T  48474 tcttttggtcatctccgttaattttt 48449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 2389 - 2258
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgcc 142  Q
    |||||||||||||||  ||| ||| |||||||||||||| ||||||| |||||| |||||| |||||||  ||||||||||||||||||| | |||| |     
T  2389 aaaggcttaatacatgctttggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctact 2290  T
Q  143 gtttactgttttggtcttctccgttagttttt 174  Q
    ||||||| |||||||| | |||||||||||||    
T  2289 gtttactattttggtcctttccgttagttttt 2258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 1207 - 1359
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||  |||  || |||||||||||||| |||| || |||||| |||||| |||||||  | |||||||||||  ||||   |||| |||||    
T  1207 ggcttaatacatgttttgatcccttaacttatttttggttt-cattttggtcccctaattataaagtctctcaatttggtcatataacccttctaccgtt 1305  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 199  Q
    |||  || ||||| ||||||||| |||||||| | |||||| ||||||||||||    
T  1306 tacaattgtggtcctctccgttattttttaaccttaaatgtttaaggtgaacca 1359  T

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Target: scaffold0098 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 40977 - 41075
Alignment:
Q  120 tttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    ||||||| ||||| | ||||| ||||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40977 tttggtctcataagtcttctgtcgtttactgttttagttctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccacc 41075  T

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Target: scaffold0015 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 207919 - 207747
Alignment:
Q  46 ggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgtt 145  Q
    ||||||||||||||||| ||| ||||| ||||||||   ||||| |||  |  ||||| || ||| | | |||| ||| |||| ||  | |||| |||||    
T  207919 ggcttaatacatcatttggtcccttaatttatttttgactttcattttaatctcctaattaaaaaacgtctcaaattgatcccttatgtcttcttccgtt 207820  T
Q  146 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
      || |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  207819 atctcttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccacc 207747  T

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Target: scaffold2127 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 637 - 512
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    ||||||||||||||||||  ||  ||||||||||||| ||||||| || ||| ||||||||||||||  | ||||||||||  ||||||| || ||||||    
T  637 aggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgt 538  T
Q  145 ttactgttttggtcttctccgttagt 170  Q
    ||||| |||||||| |||||||||||    
T  537 ttactattttggtcctctccgttagt 512  T

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Target: scaffold0122 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 218
Target Start/End: Original strand, 15943 - 16112
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||| |   ||| |||||||||||||   ||||||||||||| || || |||||||| ||||||||     ||||||||  || |||||    
T  15943 aaggcttaatacatcctccggtcccttaacttattttattttttcactttggtcccttagctataaagtatttcaat-----cccataaaccttatgccg 16037  T
Q  144 tttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 218  Q
    |||||| |||| ||| |||||||||||||||||| | ||||||||||| |||||||  |||| || |||||||||    
T  16038 tttactattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccacc 16112  T

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Target: scaffold0024 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 73108 - 72979
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||||  |  ||| |||||| | ||  | ||||| |||    
T  73108 aggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgt 73009  T
Q  145 ttactgttttggtcttctccgttagttttt 174  Q
    |  || |||||||| |||||||||||||||    
T  73008 tacctcttttggtcctctccgttagttttt 72979  T

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Target: scaffold0046 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 24938 - 24808
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||| ||| ||| ||||| |||||||| ||||||| |||||| |||||| |||||||  ||||||||||||||| ||  | |||  |||    
T  24938 aaggcttaatacatcgtttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttcctccg 24839  T
Q  144 tttactgttttggtcttctccgttagttttt 174  Q
    ||  || |||||||| |||||||||||||||    
T  24838 ttacctattttggtcatctccgttagttttt 24808  T

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Target: scaffold0046; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 23399 - 23487
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||||| | ||| |||||||||||||| ||||||| |||||| |||||||||||||   | |||||||||||||||||    
T  23399 aaggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataa 23487  T

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Target: scaffold0007 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 48 - 168
Target Start/End: Complemental strand, 145988 - 145868
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||||||||||| || |||||| |||||||| ||||||| |||  | |||||||||||||   | | |||||||||| |||||| || |||||||||    
T  145988 cttaatacatcatttggtttcttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgttta 145889  T
Q  148 ctgttttggtcttctccgtta 168  Q
    || |||||||| |||||||||    
T  145888 ctattttggtcatctccgtta 145868  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 28124 - 28213
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    |||||||||||||||  ||| ||| || |||||||||||   ||||| |||||| || ||||| |||| | | |||||||||||||||||    
T  28124 aaaggcttaatacatgttttggtccctcaacttatttttgaatttcattttggtcccttaactttaaaacgtctcaatttggtcccataa 28213  T

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Target: scaffold0013 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 96154 - 96267
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgt 144  Q
    |||||||||||||||||| |||  ||||||||||||   |||||| |||||| ||||||||||||||  | |||||||| ||| |||||| |||| ||||    
T  96154 aggcttaatacatcatttggtccattaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttccgt 96253  T
Q  145 ttactgttttggtc 158  Q
    ||||  ||||||||    
T  96254 ttaccattttggtc 96267  T

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Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 96937 - 96855
Alignment:
Q  45 aggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcc 127  Q
    ||||||||||||||||||  || |||||||||||||| ||||||| |||| | ||||||| |||||   | ||||||||||||    
T  96937 aggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccctaacaataaactgtctcaatttggtcc 96855  T

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Target: scaffold0369 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 12907 - 13030
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccgttta 147  Q
    ||||||| || |||| ||||||||||||||||||  |||| |||||||| || ||| |||||||  | ||||||||||| |||||||||| || ||||||    
T  12907 cttaatatattatttggtctcttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgttta 13006  T
Q  148 ctgttttggtcttctccgttagtt 171  Q
     | |||||||  ||||| ||||||    
T  13007 gtattttggtaatctccattagtt 13030  T

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Target: scaffold0177 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 1748 - 1876
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataaatattctgccg 143  Q
    ||||||||||||||  ||| ||| |||||||||||||  | ||||| |||||| |||||| |||||||  | ||||||||||||| ||  | ||||| ||    
T  1748 aaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcg 1847  T
Q  144 tttactgttttggtcttctccgttagttt 172  Q
    ||  || |||||||| |||||||||||||    
T  1848 ttacctcttttggtcctctccgttagttt 1876  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 5162 - 5244
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtc 126  Q
    ||||||||||||||  ||| ||| |||||||||||||| | |||   |||||| ||||||||||||||  | |||||||||||    
T  5162 aaggcttaatacatgctttggtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatttggtc 5244  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 98042 - 98092
Alignment:
Q  44 aaggcttaatacatcatttagtctcttaacttatttttagttttcactttg 94  Q
    |||||||||||||||||||  || ||||||||||||| |||||||| ||||    
T  98042 aaggcttaatacatcatttgatcccttaacttattttcagttttcaatttg 98092  T

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Target: scaffold0839 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 17 - 106
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtcccataa 132  Q
    ||||||||||||||| |||| ||| ||||||||||||||   ||||| |||| | || ||| | |||| | | |||||||||||||||||    
T  17 aaaggcttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataa 106  T

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Target: scaffold0316 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 11895 - 11855
Alignment:
Q  43 aaaggcttaatacatcatttagtctcttaacttatttttag 83  Q
    |||||||||||||||  ||| ||||||||||||||||||||    
T  11895 aaaggcttaatacatgctttggtctcttaacttatttttag 11855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 25919 - 25999
Alignment:
Q  48 cttaatacatcatttagtctcttaacttatttttagttttcactttggttccctaactataaagcatttcaatttggtccc 128  Q
    ||||||||||  ||| ||| |||||||||||||    ||||| |||||| ||||||||||||||  | |||||||||||||    
T  25919 cttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 25999  T

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