View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3262_low_7 (Length: 249)
Name: NF3262_low_7
Description: NF3262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3262_low_7 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 8 - 249
Target Start/End: Complemental strand, 32373565 - 32373326
Alignment:
| Q |
8 |
agagatgaaaaagaagatattagatcttttagccgattcgacaaacttgttagttcaatggcagagaacacaatatacagatccaggtagtaatgtcagt |
107 |
Q |
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| T |
32373565 |
agagaagaaaaagaagatattagatcttttagccgattcgacaaacttgttggttcaatggcagagaacacaatatacagatccaggtagtaatgtcagt |
32373466 |
T |
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| Q |
108 |
gtagtaagcaacacaagtagttcatcagctgaagacaattttcgaggtccctctagtgcaaactataacatgaatttgtttgtgaaacttggtgaaatat |
207 |
Q |
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| T |
32373465 |
gtagtaagcaacacaagtagttcatcagctgaagacaattttcgaggtccttctagtgcaaactataacatgaatttgtttgtg-aacttggtg-aatat |
32373368 |
T |
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| Q |
208 |
ttagaagaacaagtttatcaagacaagcagagataagaaacc |
249 |
Q |
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||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32373367 |
ttagaagaacaagtttatcaagacaagaagagataagaaacc |
32373326 |
T |
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