View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3263_high_12 (Length: 237)
Name: NF3263_high_12
Description: NF3263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3263_high_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 26274765 - 26274984
Alignment:
| Q |
18 |
cctataagtatccacgacagaacaaaataactactttattttatcaaatgatttcgtttcatccatttgggattttaggattgttattatccgattgcta |
117 |
Q |
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| T |
26274765 |
cctataagtatccacgacagaacaaaataactactttattttatcaaatgatttcgtttcatccatttgggattttaggattgttattatccgattgcta |
26274864 |
T |
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| Q |
118 |
ttctccaaacgatcggtgccctgattgacaccatagacaagaaccacacctctgggtcgactgcttggagtgctttgtggtcttctccacgtagctctta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
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| T |
26274865 |
ttctccaaacgatcggtgccctgattgacaccatagacaagaaccacacctctgggtcgactgcttggagtgctttgttgtcttctccgcgtagctctta |
26274964 |
T |
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| Q |
218 |
tttccaactacttctgtact |
237 |
Q |
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|||||||||||||||||||| |
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| T |
26274965 |
tttccaactacttctgtact |
26274984 |
T |
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