View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3265_low_21 (Length: 241)

Name: NF3265_low_21
Description: NF3265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3265_low_21
NF3265_low_21
[»] chr8 (31 HSPs)
chr8 (102-235)||(7468273-7468406)
chr8 (112-235)||(20707760-20707885)
chr8 (1-70)||(7458179-7458248)
chr8 (5-70)||(7470581-7470646)
chr8 (102-220)||(23118907-23119024)
chr8 (1-65)||(6369100-6369164)
chr8 (102-235)||(22499371-22499506)
chr8 (102-235)||(23216628-23216762)
chr8 (8-70)||(6390077-6390139)
chr8 (102-220)||(33170241-33170358)
chr8 (112-234)||(18043228-18043352)
chr8 (1-65)||(6351443-6351507)
chr8 (102-222)||(17264484-17264604)
chr8 (1-70)||(6273649-6273718)
chr8 (1-70)||(6320528-6320597)
chr8 (1-70)||(6362323-6362392)
chr8 (1-65)||(6409334-6409398)
chr8 (1-70)||(6330990-6331059)
chr8 (1-70)||(6423355-6423424)
chr8 (112-220)||(45561782-45561890)
chr8 (99-231)||(25607876-25608009)
chr8 (158-220)||(22317491-22317553)
chr8 (113-231)||(29295858-29295974)
chr8 (1-70)||(6287900-6287969)
chr8 (162-215)||(18263530-18263583)
chr8 (112-220)||(17499847-17499955)
chr8 (150-220)||(11541997-11542067)
chr8 (114-220)||(24554653-24554759)
chr8 (158-220)||(37655766-37655827)
chr8 (158-219)||(15931316-15931376)
chr8 (115-220)||(22311046-22311151)
[»] scaffold0004 (2 HSPs)
scaffold0004 (102-220)||(84413-84531)
scaffold0004 (114-219)||(25543-25648)
[»] chr7 (17 HSPs)
chr7 (102-219)||(4482259-4482376)
chr7 (102-235)||(17948092-17948227)
chr7 (112-220)||(9323134-9323242)
chr7 (102-235)||(9641024-9641159)
chr7 (113-218)||(4436880-4436985)
chr7 (114-218)||(4444281-4444385)
chr7 (144-235)||(16381885-16381977)
chr7 (158-220)||(21677619-21677680)
chr7 (158-220)||(33555665-33555727)
chr7 (115-220)||(12245681-12245786)
chr7 (115-235)||(18081378-18081499)
chr7 (162-219)||(18921191-18921248)
chr7 (158-219)||(28388455-28388516)
chr7 (114-219)||(31499238-31499343)
chr7 (115-220)||(39294231-39294336)
chr7 (115-219)||(17922977-17923081)
chr7 (156-219)||(28718036-28718099)
[»] chr5 (11 HSPs)
chr5 (112-220)||(23236485-23236593)
chr5 (112-219)||(5623493-5623600)
chr5 (114-219)||(24082105-24082211)
chr5 (115-220)||(20456641-20456746)
chr5 (112-219)||(3420907-3421014)
chr5 (112-215)||(26561862-26561965)
chr5 (116-220)||(16837814-16837918)
chr5 (102-220)||(11963585-11963703)
chr5 (112-235)||(19871886-19872010)
chr5 (113-219)||(24228017-24228122)
chr5 (8-46)||(9606067-9606105)
[»] chr1 (13 HSPs)
chr1 (112-220)||(5770272-5770380)
chr1 (102-241)||(33383888-33384029)
chr1 (102-220)||(40555365-40555482)
chr1 (102-220)||(41213725-41213843)
chr1 (114-231)||(29217134-29217252)
chr1 (97-219)||(21193153-21193274)
chr1 (114-219)||(46143769-46143875)
chr1 (114-220)||(9293476-9293583)
chr1 (121-235)||(78576-78692)
chr1 (112-220)||(21041782-21041890)
chr1 (112-219)||(5472468-5472575)
chr1 (162-219)||(18164201-18164257)
chr1 (112-168)||(40438407-40438463)
[»] chr3 (19 HSPs)
chr3 (102-220)||(43429604-43429722)
chr3 (99-220)||(6817696-6817817)
chr3 (115-228)||(10902461-10902574)
chr3 (112-235)||(22637304-22637427)
chr3 (112-219)||(21168780-21168887)
chr3 (112-215)||(41659610-41659713)
chr3 (112-219)||(12950562-12950668)
chr3 (114-219)||(4164321-4164427)
chr3 (102-235)||(17320644-17320778)
chr3 (114-216)||(4147769-4147872)
chr3 (112-219)||(33371440-33371546)
chr3 (102-220)||(15551962-15552080)
chr3 (115-220)||(37918959-37919064)
chr3 (112-220)||(5230688-5230796)
chr3 (158-235)||(31416339-31416417)
chr3 (102-173)||(17760870-17760941)
chr3 (102-173)||(19062190-19062261)
chr3 (115-220)||(8602295-8602400)
chr3 (114-219)||(18968068-18968172)
[»] chr6 (7 HSPs)
chr6 (102-235)||(15006696-15006831)
chr6 (112-234)||(34964905-34965029)
chr6 (102-235)||(22468174-22468309)
chr6 (112-219)||(12311080-12311186)
chr6 (159-220)||(19670525-19670586)
chr6 (114-219)||(29603566-29603671)
chr6 (112-220)||(22595736-22595844)
[»] chr4 (8 HSPs)
chr4 (102-220)||(50224222-50224340)
chr4 (112-220)||(47470409-47470518)
chr4 (102-235)||(13596086-13596221)
chr4 (114-220)||(10239519-10239625)
chr4 (119-231)||(19557309-19557421)
chr4 (162-219)||(13449139-13449196)
chr4 (158-219)||(5407163-5407223)
chr4 (161-219)||(18241312-18241370)
[»] chr2 (4 HSPs)
chr2 (102-235)||(6092425-6092559)
chr2 (112-219)||(24272039-24272146)
chr2 (102-187)||(25132242-25132326)
chr2 (162-220)||(30995105-30995163)
[»] scaffold0561 (1 HSPs)
scaffold0561 (115-220)||(4820-4925)
[»] scaffold0003 (1 HSPs)
scaffold0003 (114-219)||(99138-99243)
[»] scaffold0442 (2 HSPs)
scaffold0442 (112-235)||(2044-2172)
scaffold0442 (183-235)||(14254-14308)
[»] scaffold0480 (1 HSPs)
scaffold0480 (123-219)||(11086-11182)
[»] scaffold0148 (1 HSPs)
scaffold0148 (162-219)||(35914-35971)
[»] scaffold0009 (1 HSPs)
scaffold0009 (115-220)||(99019-99124)
[»] scaffold0193 (1 HSPs)
scaffold0193 (112-219)||(2935-3041)
[»] scaffold0133 (1 HSPs)
scaffold0133 (162-219)||(3808-3865)
[»] scaffold0047 (1 HSPs)
scaffold0047 (115-220)||(73362-73467)
[»] scaffold0219 (1 HSPs)
scaffold0219 (114-193)||(26045-26125)
[»] scaffold0021 (2 HSPs)
scaffold0021 (112-207)||(19889-19983)
scaffold0021 (112-207)||(29465-29559)
[»] scaffold0115 (1 HSPs)
scaffold0115 (110-220)||(19330-19440)
[»] scaffold0001 (1 HSPs)
scaffold0001 (162-219)||(141379-141437)
[»] scaffold0387 (1 HSPs)
scaffold0387 (114-210)||(3101-3198)
[»] scaffold0327 (1 HSPs)
scaffold0327 (112-208)||(6961-7056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (112-168)||(31717-31773)
[»] scaffold0010 (1 HSPs)
scaffold0010 (133-220)||(123520-123607)
[»] scaffold0174 (1 HSPs)
scaffold0174 (161-231)||(552-624)
[»] scaffold0165 (1 HSPs)
scaffold0165 (162-219)||(20136-20193)
[»] scaffold0107 (1 HSPs)
scaffold0107 (112-231)||(11416-11536)
[»] scaffold0020 (1 HSPs)
scaffold0020 (158-219)||(103976-104035)
[»] scaffold0138 (1 HSPs)
scaffold0138 (112-176)||(18665-18728)


Alignment Details
Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 7468406 - 7468273
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||    
T  7468406 agatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtattcttttgaagtgtgtggtttatatccgctgcaa 7468307  T
Q  202 ctgttgagaatttttatatgcttgttgtttggat 235  Q
    ||||||||||||||||||||  ||||||||||||    
T  7468306 ctgttgagaatttttatatgtctgttgtttggat 7468273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 20707885 - 20707760
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    ||||||||||||||| |||| |||||| ||||||||| ||||| ||||| ||||||||||||||| |||| |||||| |||| |||  ||||||||||||    
T  20707885 atttgtcgggatttgaagaatttttatgatgttgtattttgatcttatgtcatgtatacttttgaggtgtatggtttctatctgctgcaactgttgagaa 20707786  T
Q  212 ttttt--atatgcttgttgtttggat 235  Q
    |||||  |||||| ||||||||||||    
T  20707785 tttttatatatgcatgttgtttggat 20707760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7458248 - 7458179
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  7458248 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatgtgaatttctacta 7458179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 7470646 - 7470581
Alignment:
Q  5 ttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  7470646 ttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatgtgaatttctacta 7470581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 23118907 - 23119024
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||| ||||| | ||||||||||||| ||||| |||| || ||||||||||||   |    
T  23118907 agatttgcccatttgtcgggatttggataatttttatgatgttgtattttgatctcatggcatgtatac-tttgaggtgtatgatttatatccgctgcga 23119005  T
Q  202 ctgttgagaatttttatat 220  Q
    |||||||||||||||||||    
T  23119006 ctgttgagaatttttatat 23119024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6369164 - 6369100
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttc 65  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6369164 atgcttcagatggactagagatatgggctgctattaagtcatgggttgatgaatatgtcaatttc 6369100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 22499371 - 22499506
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||||||||| |||||| || |||||| ||||| | |||||||||| ||||| ||  ||| || | ||||||||||  ||    
T  22499371 agatttgcccatttgtcgggatttggagaatttttatgatattgtattttgatctcatggcatgtagactttggagatgtatgatctatatccgctgcaa 22499470  T
Q  202 ctgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||||||||||||||  ||||||| ||||||||||||    
T  22499471 ctgttgagaatttttatatatgcctgttgtttggat 22499506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 23216762 - 23216628
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||  ||||||| |||||| ||| ||||| ||||| | ||||||||||||| ||||| |||| ||||||||||| |||  ||    
T  23216762 agatttgcccatttgtcgggaaatggagaatttttatgatgatgtattttgatctcatggcatgtatac-tttgaggtgtatggtttatatcagctgcaa 23216664  T
Q  202 ctgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||||||||||||||  ||||||| ||||||||||||    
T  23216663 ctgttgagaatttttatatatgcatgttgtttggat 23216628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 6390139 - 6390077
Alignment:
Q  8 tgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  6390139 tgatggactagagatatgggctgctattaagtcatgggttgatgaatatgtcaatttctacta 6390077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 33170358 - 33170241
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||| | ||| ||||||||||||||| |||| || |||||||| |||  ||    
T  33170358 agatttgtccatttgtcgggatttggagaa-ttttatgatgatgtattttgatctcatgacatgtatacttttgaggtgtatgatttatatctgctgcaa 33170260  T
Q  202 ctgttgagaatttttatat 220  Q
    || |||||| |||||||||    
T  33170259 ctattgagattttttatat 33170241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 18043228 - 18043352
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    ||||||||||||||||||||  ||||| ||| ||||| ||||  | ||||||||||||||||||| |||| || ||||||||  ||  ||||||||||||    
T  18043228 atttgtcgggatttggagaatctttatgatgatgtattttgacctcatggcatgtatacttttgaggtgtatgatttatatcttctgcaactgttgagaa 18043327  T
Q  212 tttt--tatatgcttgttgtttgga 234  Q
    ||||  ||||||| |||||||||||    
T  18043328 tttttatatatgcctgttgtttgga 18043352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6351507 - 6351443
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttc 65  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||    
T  6351507 atgcttctgatggactagaaatatgggctgccattaagtcatgggttggtgaatatgtgaatttc 6351443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 222
Target Start/End: Complemental strand, 17264604 - 17264484
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||||||||| || ||| ||| ||||| ||||| | |||||||||||||||| ||  ||| || ||||||||||||   |    
T  17264604 agatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatttatatccgctgcga 17264505  T
Q  202 ctgttgagaatttttatatgc 222  Q
    |||||||| ||||||||||||    
T  17264504 ctgttgaggatttttatatgc 17264484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6273718 - 6273649
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||    
T  6273718 atgctgctgatggattagagatatgggctgttattaagtcatgggttgaagaatatgtgaatttctacta 6273649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6320597 - 6320528
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||| ||||    
T  6320597 atgctgctgatggactagagatatgggatgctatcaagtcatgggttgaagaatatgtgaatttctacta 6320528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6362392 - 6362323
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||| ||||    
T  6362392 atgcttcagatggactagaaatatgggctgctattaaatcatgggttgatgaatatgtcaatttctacta 6362323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6409398 - 6409334
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttc 65  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  6409398 atgctactgatggattagagatatgggctgctattaagtcatgggttgaagaatatgtaaatttc 6409334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6331059 - 6330990
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||| |||||| ||| |||| ||||    
T  6331059 atgctgctgatggactagagatatgggatgctatcaagtcatgggttgaagaatatgtgagtttctacta 6330990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6423424 - 6423355
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||||||  |||||| ||| |||| ||||    
T  6423424 atgcttcggatggactagagatatgggctgctatcaagacatgggttggagaatatgtgagtttctacta 6423355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 45561782 - 45561890
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| || ||| ||| ||||| ||||| |  ||||||||||||| |||| |||| || |||||||||| |   |||||||| ||    
T  45561782 atttgtcgggatttggagaatttatatgatgatgtattttgatctcttggcatgtatactcttgaggtgtatgatttatatccgatgcgactgttgataa 45561881  T
Q  212 tttttatat 220  Q
    |||| ||||    
T  45561882 ttttaatat 45561890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 25608009 - 25607876
Alignment:
Q  99 tgaagatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgcta 198  Q
    |||||||||| | | |||||||||||||||||| |  ||| ||| ||||| ||||| | ||||||||||||| |||||  ||| || ||||||||||||     
T  25608009 tgaagatttgcccaattgtcgggatttggagaattgatatgatgatgtattttgatctcatggcatgtatac-tttgagatgtatgatttatatccgctg 25607911  T
Q  199 aaactgttgag--aatttttatatgcttgttgttt 231  Q
      |||||||||  ||||| ||||||| ||||||||    
T  25607910 cgactgttgagaaaatttatatatgcatgttgttt 25607876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 22317553 - 22317491
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    ||||||||||||||||||| || | || ||||||||||||   ||||||||||||||||||||    
T  22317553 atggcatgtatacttttgaggtatatgatttatatccgctgccactgttgagaatttttatat 22317491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 29295974 - 29295858
Alignment:
Q  113 tttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    |||||||| | ||||||||||||||| ||  ||||| ||||| | ||| |||||||||||| ||||| | |||||||||||||||   |||||||||| |    
T  29295974 tttgtcggaacttggagaacttttatgattatgtat-ttgatatcatgacatgtatacttt-gaagtatatggtttatatccgctgcgactgttgagatt 29295877  T
Q  213 ttttatatgcttgttgttt 231  Q
    || || |||| ||||||||    
T  29295876 ttatacatgcatgttgttt 29295858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6287969 - 6287900
Alignment:
Q  1 atgcttctgatggactagagatatgggctgctattaagtcatgggttgatgaatatctgaatttccacta 70  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||||||| |||||| || ||||| ||||    
T  6287969 atgctgctgatggattagagatatggacagcaattaagtcatgggttgaagaatatgtgtatttctacta 6287900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 18263530 - 18263583
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttt 215  Q
    ||||||||||||||| |||| |||||||||||||||   |||||||||||||||    
T  18263530 catgtatacttttgaggtgtatggtttatatccgctgcgactgttgagaatttt 18263583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 17499955 - 17499847
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||| |||||| |||||| || ||| ||| ||||| ||||||  |||||||||||| ||| ||  ||| || ||||||||||||   |||||||||||    
T  17499955 atttgttgggattcggagaatttatatgatgatgtattttgattgcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgagaa 17499856  T
Q  212 tttttatat 220  Q
     ||||||||    
T  17499855 attttatat 17499847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 11542067 - 11541997
Alignment:
Q  150 ttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    ||||| ||||| |||||||||||| ||  ||| || |||||||||| ||  ||||||||||||||||||||    
T  11542067 ttgatcttatgacatgtatactttggagatgtatgatttatatccgttacgactgttgagaatttttatat 11541997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 24554653 - 24554759
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    ||||||| |||  ||||| || ||| ||| ||||| ||||| | |||||||||||||||| ||  ||| || ||||||||||||   |||||||| ||||    
T  24554653 ttgtcggaattcagagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatttatatccgctgcgactgttgataatt 24554752  T
Q  214 tttatat 220  Q
    |||||||    
T  24554753 tttatat 24554759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 37655766 - 37655827
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    ||||||||||| |||| ||||| | |||||||||||||||   ||||||||||||||||||||    
T  37655766 atggcatgtatgcttt-gaagtatatggtttatatccgctgcgactgttgagaatttttatat 37655827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 15931376 - 15931316
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||||||||| |||| ||||| | |||||||||||||||   |||||||||||||||||||    
T  15931376 atggcatgtatgcttt-gaagtatatggtttatatccgctgcgactgttgagaatttttata 15931316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 22311151 - 22311046
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    ||||||||||||||||| ||  || ||| ||||| ||||| | ||| |||| |||||||||| |||| || |||||||| | |   || |||||||||||    
T  22311151 tgtcgggatttggagaatttacatgatgatgtattttgatctcatgacatgaatacttttgaggtgtatgatttatatcagttgggacggttgagaattt 22311052  T
Q  215 ttatat 220  Q
    ||||||    
T  22311051 ttatat 22311046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 84531 - 84413
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||||| ||||| |||| || ||||||||||||| ||    
T  84531 agatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttaatttcatggcgtgtatacatttgaggtgtatgatttatatccgctacaa 84432  T
Q  202 ctgttgagaatttttatat 220  Q
    || ||||||||||||||||    
T  84431 cttttgagaatttttatat 84413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 25648 - 25543
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    ||||| |||||||||||| |||||| ||| ||||| ||||  | ||||||||||| |||||||||||| |||||||||| || |   |||||||||||||    
T  25648 ttgtcaggatttggagaatttttatgatgatgtattttgacctcatggcatgtatgcttttgaagtgtatggtttatattcgttgctactgttgagaatt 25549  T
Q  214 tttata 219  Q
    ||||||    
T  25548 tttata 25543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 4482376 - 4482259
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||| | |||||||||||||||  ||    
T  4482376 agatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgcttttaaagtatatggtttatatccgctgcaa 4482277  T
Q  202 ctgttgagaatttttata 219  Q
    ||||||| | ||||||||    
T  4482276 ctgttgaaattttttata 4482259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 17948092 - 17948227
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||||||||| |||||| ||| ||||| ||||| | ||| ||||||||||||||| |||| || ||||||||||||  ||    
T  17948092 agatttgcccatttgtcgggatttggagaatttttatgatgatgtattttgatctcatgtcatgtatacttttgaggtgtatgatttatatccgctgcaa 17948191  T
Q  202 ctgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||||||||||||||  ||||||| ||||||||||||    
T  17948192 ctgttgagaatttttatatatgcatgttgtttggat 17948227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 9323134 - 9323242
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    ||||||||||||||| | || ||||||  || ||||| ||||| | ||||||||||||||||||| |||| |||||||||||||||  ||||||||| ||    
T  9323134 atttgtcgggatttgaataatttttatgttgatgtattttgatctcatggcatgtatacttttgaggtgtatggtttatatccgctgcaactgttgataa 9323233  T
Q  212 tttttatat 220  Q
    |||||||||    
T  9323234 tttttatat 9323242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 9641159 - 9641024
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||| ||||||||||||||| |||||| ||||||||| ||||| | |||||||||| ||||| ||  ||| || | |||||||| |  ||    
T  9641159 agatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtagactttggagatgtatgatctatatccgatgcaa 9641060  T
Q  202 ctgttgagaattttt--atatgcttgttgtttggat 235  Q
    ||||||| |||||||  |||||| ||||||||||||    
T  9641059 ctgttgaaaatttttatatatgcctgttgtttggat 9641024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 4436985 - 4436880
Alignment:
Q  113 tttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    ||||||||||||||||||| ||| || ||||| | |  |||| |||||||||||||| || ||| |||| ||||||||||| | |  |||||||||||||    
T  4436985 tttgtcgggatttggagaattttcatgatgttattttatgatcttatggcatgtatatttgtgaggtgtatggtttatatctgttgcaactgttgagaat 4436886  T
Q  213 ttttat 218  Q
    | ||||    
T  4436885 tattat 4436880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 4444385 - 4444281
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    ||||||||||||| |||| ||| || ||||||| |  |||| |||||||||||||| || ||| |||| | ||||||||| |||  ||||||||||||||    
T  4444385 ttgtcgggatttgaagaattttcatgatgttgttttatgatattatggcatgtatatttgtgaggtgtatcgtttatatctgctgcaactgttgagaatt 4444286  T
Q  214 tttat 218  Q
     ||||    
T  4444285 attat 4444281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 16381977 - 16381885
Alignment:
Q  144 tgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa--tttttatatgcttgttgtttggat 235  Q
    ||||| ||||| | |||||||||||||||| ||||||| |||||||||||| ||  ||||||||| ||  ||| ||||||| ||||||||||||    
T  16381977 tgtattttgatctcatggcatgtatacttt-gaagtgtatggtttatatccactgcaactgttgaaaaattttctatatgcctgttgtttggat 16381885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 21677619 - 21677680
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    |||||||||||||||| || |||| |||||||||||||||  |||||||||||||| ||||||    
T  21677619 atggcatgtatacttt-gaggtgtatggtttatatccgctgcaactgttgagaattcttatat 21677680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 33555727 - 33555665
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    ||||||||||||||||||| |||| ||||||||| |||||   |||||||||| |||||||||    
T  33555727 atggcatgtatacttttgaggtgtatggtttatacccgctgcgactgttgagagtttttatat 33555665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 12245786 - 12245681
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    ||||||||||||||||  || ||| ||| ||||| ||||| ||||| |||||||| ||| ||  ||| || ||||||||||||   ||||||||||| ||    
T  12245786 tgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatattttggagatgtatgatttatatccgctgcgactgttgagaaatt 12245687  T
Q  215 ttatat 220  Q
    ||||||    
T  12245686 ttatat 12245681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 18081378 - 18081499
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    ||||||||||||||||| || ||| ||||||||| ||||| | |||||||||| || |  ||  ||| || | ||||||||||  |||| ||||||||||    
T  18081378 tgtcgggatttggagaatttatatgatgttgtattttgatctcatggcatgtagacctaggagatgtatgatctatatccgctgcaactattgagaattt 18081477  T
Q  215 t-tatatgcttgttgtttggat 235  Q
    | ||||| | ||||||||||||    
T  18081478 tatatatacatgttgtttggat 18081499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 18921191 - 18921248
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    |||||||| |||||| |||| |||||||||||||||   |||||||||||||||||||    
T  18921191 catgtataattttgaggtgtatggtttatatccgctgcgactgttgagaatttttata 18921248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 28388516 - 28388455
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    |||||||||||||| |||| |||| || ||||||||||||  |||| |||||||||||||||    
T  28388516 atggcatgtatactcttgaggtgtatgatttatatccgctgcaactattgagaatttttata 28388455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 31499343 - 31499238
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    |||||||||||| ||||| ||||||  || | ||| ||||| | ||| |||| |||||||||| |||| || ||||||||||||   |||||| ||||||    
T  31499343 ttgtcgggattttgagaatttttatgttgatatattttgatatcatgacatgcatacttttgaggtgtatgatttatatccgctgcgactgttaagaatt 31499244  T
Q  214 tttata 219  Q
    ||||||    
T  31499243 tttata 31499238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 39294231 - 39294336
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    |||||| | ||| |||| || ||| ||| ||||| ||||| | |||||||||||||||| ||  ||| || ||||||||||||   ||||||||||||||    
T  39294231 tgtcggtacttgaagaatttatatgatgatgtattttgatctcatggcatgtatactttggatatgtatgatttatatccgctgcgactgttgagaattt 39294330  T
Q  215 ttatat 220  Q
    ||||||    
T  39294331 ttatat 39294336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 17923081 - 17922977
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    |||| |||||||||||| || ||| ||| ||||| ||||| | ||| |||||||||||| ||  ||| || ||||||||||||   |||||||| |||||    
T  17923081 tgtcaggatttggagaatttatatgatgatgtattttgatctcatgacatgtatactttagagatgtatgatttatatccgctgcgactgttgaaaattt 17922982  T
Q  215 ttata 219  Q
    |||||    
T  17922981 ttata 17922977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 28718099 - 28718036
Alignment:
Q  156 ttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||| |||||||||||| || |||| |||||||||||| ||   |||||||||||||||||||    
T  28718099 ttatgacatgtatactttggaggtgtatggtttatatccactgcgactgttgagaatttttata 28718036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 23236485 - 23236593
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| | ||||||||||||||||||| |||| || ||||||||||||  ||||||||||||    
T  23236485 atttgtcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtatacttttgaggtgtatgatttatatccgctgcaactgttgagaa 23236584  T
Q  212 tttttatat 220  Q
    |||||||||    
T  23236585 tttttatat 23236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 5623493 - 5623600
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||| |||||  |||| | ||| |||||||||| |||| |||| || ||||||||||||  ||||||||||||    
T  5623493 atttgtcgggatttggagaatttttatgatgatgtattgtgatatcatgacatgtatactattgatgtgtatgatttatatccgctgcaactgttgagaa 5623592  T
Q  212 tttttata 219  Q
    ||||||||    
T  5623593 tttttata 5623600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 24082211 - 24082105
Alignment:
Q  114 ttgtcgggattt-ggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    |||||||||||| |||||| ||| || ||| ||||| ||||| | ||| |||||||||||||||| | | |||||||||||||||  |||||||||||||    
T  24082211 ttgtcgggattttggagaattttgatgatgatgtattttgatatcatgtcatgtatacttttgaattatatggtttatatccgctgcaactgttgagaat 24082112  T
Q  213 ttttata 219  Q
    |||||||    
T  24082111 ttttata 24082105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 20456641 - 20456746
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    ||||||||||||||||| || ||| ||| ||||| ||||| | |||||||||||| ||| ||  ||| || ||||||||||||   ||||||||||||||    
T  20456641 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgtgactgttgagaattt 20456740  T
Q  215 ttatat 220  Q
    ||||||    
T  20456741 ttatat 20456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 3420907 - 3421014
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||| |||| ||  ||||||||| ||||| ||||| | ||| ||||||||||||||| |||| || |||||||| |||   | |||||||||    
T  3420907 atttgtcgggatgtggaaaaaatttataatgatgtattttgatatcatgacatgtatacttttgaggtgtatgatttatatctgctgcgattgttgagaa 3421006  T
Q  212 tttttata 219  Q
    ||||||||    
T  3421007 tttttata 3421014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 26561862 - 26561965
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||  || || ||||| | ||||| ||||||||||||| | || || ||||||||||||   |||||||||||    
T  26561862 atttgtcgggatttggagaaattttatgataatgaattttgatatcatggcttgtatacttttgaggagtatgatttatatccgctgcgactgttgagaa 26561961  T
Q  212 tttt 215  Q
    ||||    
T  26561962 tttt 26561965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 16837814 - 16837918
Alignment:
Q  116 gtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttt 215  Q
    |||||||||||||||| || ||| ||||||||| || || |||||||||||| ||||| ||  |||  | ||||||||||||   ||| |||||||||||    
T  16837814 gtcgggatttggagaatttatatgatgttgtatttttatcttatggcatgtagactttggagatgtaagatttatatccgctgcgactattgagaatttt 16837913  T
Q  216 tatat 220  Q
    |||||    
T  16837914 tatat 16837918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 11963703 - 11963585
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | ||||||| |||||||||||  || ||| ||| ||||| ||||| ||||| ||| |||| ||||||  ||| || ||||||||||||   |    
T  11963703 agatttgcccatttgtcaggatttggagattttatatgatgatgtatattgatcttatgacatttatatttttgagatgtatgatttatatccgctgcga 11963604  T
Q  202 ctgttgagaatttttatat 220  Q
    || ||||||||||||||||    
T  11963603 ctattgagaatttttatat 11963585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 19872010 - 19871886
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| | ||| |||||| ||||| ||  ||| || | | |||| |||  |||| |||||||    
T  19872010 atttgtcgggatttggagaa-ttttatgatgttgtattttgatctcatgacatgtagactttggagatgtatgatctgtatctgctgcaactattgagaa 19871912  T
Q  212 tttt--tatatgcttgttgtttggat 235  Q
    ||||  ||||||| ||||||||||||    
T  19871911 tttttatatatgcctgttgtttggat 19871886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 24228017 - 24228122
Alignment:
Q  113 tttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    |||||||||| |||||||| |||||| |   ||||| ||||| | ||||||||||| |||| ||||| | |||||||||||||||   ||||||| ||||    
T  24228017 tttgtcgggacttggagaatttttatgactatgtattttgatatcatggcatgtatgcttt-gaagtatatggtttatatccgctgcgactgttgggaat 24228115  T
Q  213 ttttata 219  Q
    |||||||    
T  24228116 ttttata 24228122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 9606067 - 9606105
Alignment:
Q  8 tgatggactagagatatgggctgctattaagtcatgggt 46  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  9606067 tgatggactcgagatatgggatgctattaagtcatgggt 9606105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 5770272 - 5770380
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| | ||||||| ||||||||||| |||| |||| ||||||||||  ||||||||||||    
T  5770272 atttgtcgggatttggagaatttttatgatgttgtattttgatctcatggcatatatacttttgaggtgtctggtctatatccgctgcaactgttgagaa 5770371  T
Q  212 tttttatat 220  Q
    |||||||||    
T  5770372 tttttatat 5770380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 33384029 - 33383888
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | ||||||||| |||||||||| |||||| ||||||||| ||||| | ||| |||||| ||||| ||  ||| || | ||||||||||  ||    
T  33384029 agatttgcccatttgtcggaatttggagaatttttatgatgttgtattttgatctcatgacatgtagactttggagatgtatgatctatatccgctgcaa 33383930  T
Q  202 ctgttgagaattttt--atatgcttgttgtttggatattctt 241  Q
    |||||||||||||||  ||||||||||||||||||| |||||    
T  33383929 ctgttgagaatttttatatatgcttgttgtttggattttctt 33383888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 40555482 - 40555365
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | ||||||||||||||| |||| |||||| ||| ||||| ||||| | ||| |||||||||| |||| |||| |||||||||||||||  ||    
T  40555482 agatttgcccatttgtcgggatttgaagaa-ttttatgatgatgtattttgatctcatgacatgtatactattgaggtgtatggtttatatccgctgcaa 40555384  T
Q  202 ctgttgagaatttttatat 220  Q
    |||||||||||||||||||    
T  40555383 ctgttgagaatttttatat 40555365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 41213725 - 41213843
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||||||||| |||||| ||| ||||| || || | ||  ||||||||||||||| |||| ||||||||||| |||  ||    
T  41213725 agatttgcccatttgtcgggatttggagaatttttatgatgatgtattttaatctcattacatgtatacttttgaggtgtatggtttatatctgctgcaa 41213824  T
Q  202 ctgttgagaatttttatat 220  Q
    |||||||||||||||||||    
T  41213825 ctgttgagaatttttatat 41213843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 29217252 - 29217134
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    ||||||| |||||||||| |||||| ||||||||| |||||||  | |||||||| |||||||| | | |||||||||||||||  ||||||||||||||    
T  29217252 ttgtcggaatttggagaatttttatgatgttgtattttgatttcttagcatgtatgcttttgaattatatggtttatatccgctgcaactgttgagaatt 29217153  T
Q  214 tt-tatatgcttgttgttt 231  Q
    || || |||| ||||||||    
T  29217152 ttatacatgcatgttgttt 29217134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 21193274 - 21193153
Alignment:
Q  97 tttgaagatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgc 196  Q
    |||||||||||  | ||||||||||| || |||||||||||| ||  ||||| ||||| | || |||||||| |||| ||||| | ||||||||||||||    
T  21193274 tttgaagatttacccatttgtcgggacttagagaacttttatgattatgtattttgatatcatagcatgtatgcttt-gaagtatatggtttatatccgc 21193176  T
Q  197 taaaactgttgagaatttttata 219  Q
    |   |||||||||||||||||||    
T  21193175 tgcgactgttgagaatttttata 21193153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 46143875 - 46143769
Alignment:
Q  114 ttgtcgggattt-ggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    |||||||||||| |||||| ||| || ||| ||||| ||||| | ||| ||||||||||||||| |||| | |||||||||||||   ||||||||||||    
T  46143875 ttgtcgggattttggagaattttgatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatcgtttatatccgctgcgactgttgagaat 46143776  T
Q  213 ttttata 219  Q
    |||||||    
T  46143775 ttttata 46143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 9293476 - 9293583
Alignment:
Q  114 ttgtcgggattt-ggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    |||||||||||| |||||| ||| || ||||||||| ||||| | ||| |||||||| ||||||| | | || ||||||||||||   ||||||||||||    
T  9293476 ttgtcgggattttggagaattttgatgatgttgtattttgatatcatgacatgtatatttttgaattatatgatttatatccgctgcgactgttgagaat 9293575  T
Q  213 ttttatat 220  Q
    ||||||||    
T  9293576 ttttatat 9293583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 78576 - 78692
Alignment:
Q  121 gatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattttt--at 218  Q
    ||||||||||| ||  || ||| ||||| ||||| | |||||||||||||||| ||  ||| || | ||||||||||   ||||||||||||||||  ||    
T  78576 gatttggagaatttacatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatctatatccgctgccactgttgagaatttttacat 78675  T
Q  219 atgcttgttgtttggat 235  Q
    |||| ||||||||||||    
T  78676 atgcatgttgtttggat 78692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 21041890 - 21041782
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| || ||| ||| ||||| |||||   ||| || ||||||||| ||  ||| || ||||||||||||   |||||||||||    
T  21041890 atttgtcgggatttggagaatttatatgatgatgtattttgatcacatgacaagtatactttggagatgtatgatttatatccgctgcgactgttgagaa 21041791  T
Q  212 tttttatat 220  Q
     ||||||||    
T  21041790 attttatat 21041782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 5472468 - 5472575
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| || ||| ||| ||||| | ||| | ||| |||||||||||||||  ||| || | | ||||||||   ||||||| |||    
T  5472468 atttgtcgggatttggagaatttatatgatgatgtatttcgatatcatgacatgtatacttttgagatgtatgatctttatccgctgcgactgttgggaa 5472567  T
Q  212 tttttata 219  Q
    ||||||||    
T  5472568 tttttata 5472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 18164257 - 18164201
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    |||||||||||| || |||| || ||||||||||||  ||||||||||||||||||||    
T  18164257 catgtatacttt-gaggtgtatgatttatatccgctgcaactgttgagaatttttata 18164201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 40438407 - 40438463
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtat 168  Q
    ||||||||||||||| |||| | |||| ||||||||| ||||| | |||||||||||    
T  40438407 atttgtcgggatttgaagaattgttatgatgttgtattttgatctcatggcatgtat 40438463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 43429604 - 43429722
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||| ||||||||||||| |||||| ||| ||||| ||||| | ||||||||||||||||||| |||| |||||||||||||||  ||    
T  43429604 agatttgcccatttgttgggatttggagaatttttatgatgatgtattttgatctcatggcatgtatacttttgaggtgtatggtttatatccgctgcaa 43429703  T
Q  202 ctgttgagaatttttatat 220  Q
    ||||||| |||||||||||    
T  43429704 ctgttgaaaatttttatat 43429722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 6817696 - 6817817
Alignment:
Q  99 tgaagatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgcta 198  Q
    |||||||||| | |||||||||||||||||||| || ||| ||| ||||| ||||| | ||||||||||||||||||| |||| || ||||||||||||     
T  6817696 tgaagatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttgaggtgtatgatttatatccgctg 6817795  T
Q  199 aaactgttgagaatttttatat 220  Q
      ||||||||||||||||||||    
T  6817796 cgactgttgagaatttttatat 6817817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 10902574 - 10902461
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    ||||||||||||||||| || ||| ||| ||||| ||||| | ||||||||||||||||||| |||| |  ||||||||||||  |||||||||||||||    
T  10902574 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttgaggtgtataatttatatccgctgcaactgttgagaattt 10902475  T
Q  215 ttatatgcttgttg 228  Q
    |||||||| |||||    
T  10902474 ttatatgcatgttg 10902461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 22637427 - 22637304
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgag-a 210  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||| | ||| ||||||||| ||||| |||| |||||||||||||||  |||||||||| |    
T  22637427 atttgtcgggatttggagaatttttatgatgatgtattttgatctcatgacatgtatac-tttgaggtgtatggtttatatccgctgcaactgttgagaa 22637329  T
Q  211 atttttatatgcttgttgtttggat 235  Q
    |||| ||||||| ||||||||||||    
T  22637328 atttatatatgcctgttgtttggat 22637304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 21168780 - 21168887
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||| |||||  |||| | ||| |||||||||| |||| |||| || ||||||||||||  ||||||||||||    
T  21168780 atttgtcgggatttggagaatttttatgatgatgtattgtgatatcatgacatgtatactattgatgtgtatgatttatatccgctgcaactgttgagaa 21168879  T
Q  212 tttttata 219  Q
    ||||||||    
T  21168880 tttttata 21168887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 41659713 - 41659610
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||| | |||  |||||||||||||| || | |||||||||||||||  || |||||||||    
T  41659713 atttgtcgggatttggagaatttttatgatgatgtattttgatatcatgaaatgtatacttttgaggtttatggtttatatccgctgcaattgttgagaa 41659614  T
Q  212 tttt 215  Q
    ||||    
T  41659613 tttt 41659610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 12950668 - 12950562
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||| ||||||||||||||| || ||| ||| ||||| ||||| | |||||||||||||||||| || || || ||||||||||||   |||||||||||    
T  12950668 atttatcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttg-agggtatgatttatatccgctgcgactgttgagaa 12950570  T
Q  212 tttttata 219  Q
    ||||||||    
T  12950569 tttttata 12950562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 4164321 - 4164427
Alignment:
Q  114 ttgtcgggattt-ggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    |||||||||||| |||||| ||| || ||| ||||| || || | |||||||||||||||||||| | | |||||||||||||||  |  ||||||||||    
T  4164321 ttgtcgggattttggagaattttaatgatgatgtattttaatatcatggcatgtatacttttgaattttatggtttatatccgctgtagttgttgagaat 4164420  T
Q  213 ttttata 219  Q
    |||||||    
T  4164421 ttttata 4164427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 17320644 - 17320778
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||| ||| | | |||||||||| ||||| ||  ||  || | ||||||||||  |     
T  17320644 agatttgcccatttgtcgggatttggagaatttttatgatgttgtattttggtctcatggcatgtagactttagagatgaatgatctatatccgctgcag 17320743  T
Q  202 ctgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||| ||||||||||  ||||||| ||||||||||||    
T  17320744 ctg-tgagaatttttatatatgcctgttgtttggat 17320778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 4147769 - 4147872
Alignment:
Q  114 ttgtcgggattt-ggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaat 212  Q
    |||||||||||| |||||| ||| || ||  ||||| ||||| | ||| |||||||||||||||| | | |||||||||||||||  || ||||||||||    
T  4147769 ttgtcgggatttcggagaattttgatgataatgtattttgatatcatgacatgtatacttttgaattttatggtttatatccgctgcaattgttgagaat 4147868  T
Q  213 tttt 216  Q
    ||||    
T  4147869 tttt 4147872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 33371440 - 33371546
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    ||||||||||| ||| ||||||||||| ||  ||||| ||||| | ||| || |||| |||| ||||| | |||||||||||||||   |||||||||||    
T  33371440 atttgtcgggacttgaagaacttttatgattatgtattttgatatcatgacaggtatgcttt-gaagtatatggtttatatccgctgcgactgttgagaa 33371538  T
Q  212 tttttata 219  Q
    ||||||||    
T  33371539 tttttata 33371546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 15551962 - 15552080
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||| ||||| || ||| ||| ||||| ||||| | ||| |||||||| ||| ||  ||| || |||||||| |||   |    
T  15551962 agatttgcccatttgtcgggatttagagaatttatatgatgatgtatattgatctcatgacatgtatattttggagatgtatgatttatatctgctgcga 15552061  T
Q  202 ctgttgagaatttttatat 220  Q
    |||||||||||||||||||    
T  15552062 ctgttgagaatttttatat 15552080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 37918959 - 37919064
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    |||||||| |||||||| |||||| ||| ||||| ||||| | ||| |||||||| ||| ||  ||| || ||| ||||||||   ||||||||||||||    
T  37918959 tgtcgggacttggagaatttttatgatgatgtattttgatctcatgacatgtatattttggagatgtatgatttctatccgctgcgactgttgagaattt 37919058  T
Q  215 ttatat 220  Q
    ||||||    
T  37919059 ttatat 37919064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 5230688 - 5230796
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||  || ||| ||| ||||| ||||| ||||| |||||||  ||| ||  ||| || ||||||| ||||  |||| |||||||    
T  5230688 atttgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatgttttggagatgtatgatttatatacgctgcaactattgagaa 5230787  T
Q  212 tttttatat 220  Q
    |||||||||    
T  5230788 tttttatat 5230796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 31416339 - 31416417
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||||||| |||||||| || |||| |||||||||| ||||  ||||||||||||||||  ||||||| ||||||||||||    
T  31416339 atggcatatatacttt-gaggtgtatggtttatattcgctgcaactgttgagaatttttatatatgcctgttgtttggat 31416417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 17760870 - 17760941
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttt 173  Q
    ||||||| | |||||||| ||||||||||| || ||| ||| ||||| ||||| ||||| ||||||||||||    
T  17760870 agatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttatgacatgtatacttt 17760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 19062190 - 19062261
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttt 173  Q
    ||||||| | |||||||| ||||||||||| || ||| ||| ||||| ||||| ||||| ||||||||||||    
T  19062190 agatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttatgacatgtatacttt 19062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 8602400 - 8602295
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    |||||||| |||||||| || ||| ||| ||||| ||||| ||||| |||||||| ||| ||  ||| ||  |||||||||||   ||||||||||| ||    
T  8602400 tgtcgggacttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatgtatgacttatatccgctgcgactgttgagaaatt 8602301  T
Q  215 ttatat 220  Q
    ||||||    
T  8602300 ttatat 8602295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 18968172 - 18968068
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    |||||||||||||||||| ||||||| ||   ||| ||||| | ||| |||||||| |||| | |||| || ||||||||||||   ||||||| |||||    
T  18968172 ttgtcgggatttggagaatttttatattgagatattttgatatcatgacatgtatattttttaggtgtatgctttatatccgctgcgactgttg-gaatt 18968074  T
Q  214 tttata 219  Q
    ||||||    
T  18968073 tttata 18968068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 15006696 - 15006831
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||| ||||| |||||| ||||||||| ||||| | |||||||||| |||||| | |||| |||||||||||||||  ||    
T  15006696 agatttgcccatttgtcgggatttcgagaatttttatgatgttgtattttgatctcatggcatgtagacttttaaggtgtatggtttatatccgctgcaa 15006795  T
Q  202 ctgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||||| ||||||||  ||||||| ||||||||||||    
T  15006796 ctgttaagaatttttatatatgcctgttgtttggat 15006831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 34965029 - 34964905
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||| ||||| |||||| ||| ||||| ||||| | ||||||||||||||||| | |||| ||||||||||| |||  || |||||||||    
T  34965029 atttgtcgggatttagagaatttttatgatgatgtattttgatctcatggcatgtatactttttaggtgtatggtttatatctgctgcaaatgttgagaa 34964930  T
Q  212 ttttt--atatgcttgttgtttgga 234  Q
    |||||  |||||| |||||||||||    
T  34964929 tttttaaatatgcctgttgtttgga 34964905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 22468174 - 22468309
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||| ||||| | ||| |||||| ||||| ||  ||  || | ||||||||||  ||    
T  22468174 agatttgtccatttgtcgggatttggagaatttttatgatgttgtattttgatctcatgccatgtagactttagagatgcatgatctatatccgctgcaa 22468273  T
Q  202 ctgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||||||||||||||  ||||||| ||||||||||||    
T  22468274 ctgttgagaatttttatatatgcctgttgtttggat 22468309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 12311080 - 12311186
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    ||||||||||| ||||||||| ||||| ||  ||||| ||||| | ||||||||||| |||| ||||| | |||||||||||||||   |||||||||||    
T  12311080 atttgtcgggacttggagaacatttatgattatgtattttgatatcatggcatgtatgcttt-gaagtatatggtttatatccgctgcgactgttgagaa 12311178  T
Q  212 tttttata 219  Q
    ||||||||    
T  12311179 tttttata 12311186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 19670586 - 19670525
Alignment:
Q  159 tggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    |||||||||| |||| || |||| |||||||||||||||  |||||||||||||||||||||    
T  19670586 tggcatgtatgctttggaggtgtatggtttatatccgctgcaactgttgagaatttttatat 19670525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 29603671 - 29603566
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    |||||||||||||||||| ||||||| ||   ||  ||||| | ||| ||||||| || || || ||| ||||||||||||||||  |||||||||||||    
T  29603671 ttgtcgggatttggagaatttttatattgagatactttgatatcatgacatgtatgctcttaaattgtatggtttatatccgctacgactgttgagaatt 29603572  T
Q  214 tttata 219  Q
    ||||||    
T  29603571 tttata 29603566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 22595736 - 22595844
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||| ||||||||| || ||| ||| ||||| |||||   ||| |||||||||||| ||  ||| || |||||||| |||   |||||||||||    
T  22595736 atttgtcggggtttggagaatttatatgatgatgtattttgatcacatgacatgtatactttggagatgtatgatttatatctgctgcgactgttgagaa 22595835  T
Q  212 tttttatat 220  Q
     ||||||||    
T  22595836 attttatat 22595844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 50224222 - 50224340
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||||| |||||||||||||||||||| ||||||  || ||||| ||||| | |||| |||||||||||||| |||| | |||||||||||||  ||    
T  50224222 agatttgtccatttgtcgggatttggagaatttttatgttgatgtattttgatctcatggtatgtatacttttgaggtgtattgtttatatccgctgcaa 50224321  T
Q  202 ctgttgagaatttttatat 220  Q
    ||||||||||||| |||||    
T  50224322 ctgttgagaatttatatat 50224340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 47470409 - 47470518
Alignment:
Q  112 atttgtcgggatttggagaactttt-ataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgaga 210  Q
    |||||||| ||||||||||| |||| || ||| ||||| ||||| | ||| ||||||||||||||| |||| |||||||||||||||   ||||||||||    
T  47470409 atttgtcgagatttggagaattttttatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatggtttatatccgctgcgactgttgaga 47470508  T
Q  211 atttttatat 220  Q
    ||||||||||    
T  47470509 atttttatat 47470518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 13596086 - 13596221
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||| ||||||||||||||| |||||| ||||||||| ||||| | |||||||||| ||||| ||  ||| || | |||||||| |  ||    
T  13596086 agatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtagactttggagatgtatgatctatatccgatgcaa 13596185  T
Q  202 ctgttgagaatttt--tatatgcttgttgtttggat 235  Q
    ||||||| ||||||  ||||||| ||||||||||||    
T  13596186 ctgttgaaaatttttatatatgcctgttgtttggat 13596221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 10239519 - 10239625
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    ||||||| ||||| |||| ||||||  || ||||| ||||  | |||||||||||||||||||||||| |||||||||||||||  ||| ||  ||||||    
T  10239519 ttgtcggaatttgaagaatttttatgttgatgtattttgacctcatggcatgtatacttttgaagtgtatggtttatatccgctgcaacggtatagaatt 10239618  T
Q  214 tttatat 220  Q
    |||||||    
T  10239619 tttatat 10239625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 19557421 - 19557309
Alignment:
Q  119 gggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttt-ta 217  Q
    ||||||||||||| |||||| ||| ||||| ||||| | || |||||||||| ||||| |||| |||||||||||||||  || ||||||||||||| |     
T  19557421 gggatttggagaatttttatgatgatgtattttgatctcatagcatgtatac-tttgaggtgtatggtttatatccgctgcaattgttgagaattttatg 19557323  T
Q  218 tatgcttgttgttt 231  Q
    ||||| ||||||||    
T  19557322 tatgcctgttgttt 19557309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 13449139 - 13449196
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||||||||||||| |||| | |||||||||||||  ||||||||||||||||||||    
T  13449139 catgtatacttttgaggtgtatagtttatatccgctgcaactgttgagaatttttata 13449196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 5407223 - 5407163
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    |||||||||||||||| || |||| |||||||||||||||  ||||||||||||| ||||||    
T  5407223 atggcatgtatacttt-gaggtgtatggtttatatccgctgcaactgttgagaatatttata 5407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 18241312 - 18241370
Alignment:
Q  161 gcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    |||||||| |||||||| | | || ||||||||||||  ||||||||||||||||||||    
T  18241312 gcatgtatgcttttgaattatatgatttatatccgctgcaactgttgagaatttttata 18241370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 6092559 - 6092425
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaa 201  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||| ||||| ||| | |||||| ||||| ||  ||| || | ||||||||||  ||    
T  6092559 agatttgcccatttgtcgggatttggagaatttttatgatgttgtattttgatcttacgacatgtagactttggagatgtatgatctatatccgctgcaa 6092460  T
Q  202 ctgttgagaatttt-tatatgcttgttgtttggat 235  Q
    |||||||||||||| ||||||||||||||||||||    
T  6092459 ctgttgagaattttatatatgcttgttgtttggat 6092425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 24272146 - 24272039
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||| | ||| ||| |||||||| || |||| || ||||||||| ||   |||||||||||    
T  24272146 atttgtcgggatttggagaatttttatgatgatgtattttgatatcatgacatatatactttagaggtgtatgatttatatccactgcgactgttgagaa 24272047  T
Q  212 tttttata 219  Q
    ||||||||    
T  24272046 tttttata 24272039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 25132326 - 25132242
Alignment:
Q  102 agatttgtctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtt 187  Q
    ||||||| | ||||| |||||||||||||| |||||| ||||||||| ||||| | ||||||||||||| |||||||||| |||||    
T  25132326 agatttgcccatttgacgggatttggagaatttttatgatgttgtattttgatctcatggcatgtatac-tttgaagtgtatggtt 25132242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 30995105 - 30995163
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    ||||||||||||||| |||| |||||||||||||||   ||||||||||||||||||||    
T  30995105 catgtatacttttgaggtgtatggtttatatccgctgcgactgttgagaatttttatat 30995163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 4820 - 4925
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    ||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| ||||| ||  ||| || | ||||||||||  ||| |||||||||||    
T  4820 tgtcgggatttggagaatttttatgatgttgtattttgatttcatggcatgtagactttggagatgtatgatctatatccgctgcaaccgttgagaattt 4919  T
Q  215 ttatat 220  Q
    ||||||    
T  4920 ttatat 4925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 99243 - 99138
Alignment:
Q  114 ttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatt 213  Q
    |||||||||||| ||||| |||||| ||||| ||| | | | | ||||||||||||||||||| |||| || ||||||||||||  ||||||||||||||    
T  99243 ttgtcgggatttagagaatttttatgatgttatatttcgttatcatggcatgtatacttttgaggtgtatgatttatatccgctgcaactgttgagaatt 99144  T
Q  214 tttata 219  Q
    ||||||    
T  99143 tttata 99138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 2044 - 2172
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgta----tacttttgaagtgtgtggtttatatccgctaaaactgttg 207  Q
    ||||||||||||| |||||| |||||| ||| ||||| ||||  | ||||||||||    |  ||||||||||| |||||||||||||||| ||||||||    
T  2044 atttgtcgggatt-ggagaatttttatgatgatgtattttgacctcatggcatgtatgtttttttttgaagtgtatggtttatatccgctacaactgttg 2142  T
Q  208 agaatttt--tatatgcttgttgtttggat 235  Q
    ||||||||  ||||||| ||||||||||||    
T  2143 agaatttttatatatgcctgttgtttggat 2172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 14254 - 14308
Alignment:
Q  183 tggtttatatccgctaaaactgttgagaatttt--tatatgcttgttgtttggat 235  Q
    |||||||||||||||  ||||||||||||||||  ||||||| ||||||||||||    
T  14254 tggtttatatccgctgcaactgttgagaatttttatatatgcctgttgtttggat 14308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 11086 - 11182
Alignment:
Q  123 tttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||||||| |||||| ||| ||||| ||||| | ||| ||||||||||||| | |||| ||||||||||||| |  ||||||||||||||||||||    
T  11086 tttggagaatttttatgatgatgtattttgatatcatgacatgtatactttttaggtgtatggtttatatccgttgcaactgttgagaatttttata 11182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 35971 - 35914
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||||||||||||| |||| |||||||||||||||  ||||||||||||||||||||    
T  35971 catgtatacttttgaggtgtatggtttatatccgctgcaactgttgagaatttttata 35914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 99019 - 99124
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    ||||||||||||||||| || ||||||| ||||| ||||| | ||| |||||||||||| ||  ||| ||  |||||||||||   ||||||||||||||    
T  99019 tgtcgggatttggagaatttatataatgatgtatattgatctcatgacatgtatactttggagatgtatgacttatatccgctgcgactgttgagaattt 99118  T
Q  215 ttatat 220  Q
    ||||||    
T  99119 ttatat 99124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 3041 - 2935
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa 211  Q
    ||||||||||| |||||||| |||||| ||  ||||| ||||| | ||||||||||| | |||||||||  |||||||||||||||   | |||||||||    
T  3041 atttgtcgggacttggagaatttttatgattatgtattttgatatcatggcatgtatgc-tttgaagtgaatggtttatatccgctgcgattgttgagaa 2943  T
Q  212 tttttata 219  Q
    ||||||||    
T  2942 tttttata 2935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 3808 - 3865
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||||||||||||| |||| ||||||||||| |||  ||||||||||||||||||||    
T  3808 catgtatacttttgaggtgtatggtttatatctgctgcaactgttgagaatttttata 3865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 73362 - 73467
Alignment:
Q  115 tgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaattt 214  Q
    |||||||| |||||||| || ||| ||| ||||| ||||| | |||||||||||||||| ||  ||| || ||||||||||||   | ||||||||||||    
T  73362 tgtcgggacttggagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatttatatccgctgcgattgttgagaattt 73461  T
Q  215 ttatat 220  Q
    ||||||    
T  73462 ttatat 73467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 26045 - 26125
Alignment:
Q  114 ttgtcgggatttggagaactttt-ataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatc 193  Q
    |||||||||||||||||| |||| || ||| ||||| ||||| | ||| ||||||||||||||| |||| |||||||||||    
T  26045 ttgtcgggatttggagaattttttatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatggtttatatc 26125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 19889 - 19983
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttg 207  Q
    ||||||||||| |||||||| |||||| ||  ||||| ||||| | ||||||||||| | |||||||| | ||||||||||||||||  |||||||    
T  19889 atttgtcgggacttggagaaattttatgattatgtattttgatatcatggcatgtatgc-tttgaagtatatggtttatatccgctacgactgttg 19983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 29465 - 29559
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttg 207  Q
    ||||||||||| |||||||| |||||| ||  ||||| ||||| | ||||||||||| | |||||||| | ||||||||||||||||  |||||||    
T  29465 atttgtcgggacttggagaaattttatgattatgtattttgatatcatggcatgtatgc-tttgaagtatatggtttatatccgctacgactgttg 29559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 19440 - 19330
Alignment:
Q  110 ctatttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgag 209  Q
    |||| ||||||||||||||||| || ||| ||| ||||| ||||| | ||| |||||| ||||| ||  ||| || | ||||||||||  |||||||||     
T  19440 ctatatgtcgggatttggagaatttatatgatgatgtattttgatctcatgacatgtagactttggagatgtatgatctatatccgctgcaactgttgat 19341  T
Q  210 aatttttatat 220  Q
    |||||||||||    
T  19340 aatttttatat 19330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 141379 - 141437
Alignment:
Q  162 catgtatacttttgaagtgtgt-ggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||||||||||||| |||| | ||||||||||||||  ||||||||||||||||||||    
T  141379 catgtatacttttgaggtgtattggtttatatccgctgcaactgttgagaatttttata 141437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 3101 - 3198
Alignment:
Q  114 ttgtcgggattt-ggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgaga 210  Q
    |||||||||||| ||| || ||| || ||| ||||| ||||| | ||| ||||||||||||||| |||| |||||||||||||||   ||||||||||    
T  3101 ttgtcgggattttggaaaattttgatcatgatgtattttgatatcatgacatgtatacttttgaggtgtctggtttatatccgctgcgactgttgaga 3198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 6961 - 7056
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttga 208  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||| | || |||||||| |||||||  | |  ||||||||||||||  |||||||||    
T  6961 atttgtcgggatttggagaatttttatgatgatgtat-ttgatatcatagcatgtatgcttttgagttataaggtttatatccgctgcaactgttga 7056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 31717 - 31773
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtat 168  Q
    ||||||||||| ||||||||||||||| ||  ||||||||||| | |||||||||||    
T  31717 atttgtcgggacttggagaacttttatgattatgtatcttgatataatggcatgtat 31773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 123520 - 123607
Alignment:
Q  133 ttttataatgttgtatcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttatat 220  Q
    |||||| ||| ||||| ||||| | ||| ||||||||||||||| |||| || |||||||| |||  |||| |||||||||| |||||    
T  123520 ttttatgatgatgtattttgatctcatgacatgtatacttttgaggtgtatgatttatatctgctgcaactattgagaatttatatat 123607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 624 - 552
Alignment:
Q  161 gcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaa--tttttatatgcttgttgttt 231  Q
    |||||||| |||||||| | | |||||||||||||||  ||||||||||||  ||| ||||||| ||||||||    
T  624 gcatgtatgcttttgaattatatggtttatatccgctgcaactgttgagaacgtttatatatgcatgttgttt 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 20193 - 20136
Alignment:
Q  162 catgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    ||||||||||||||| |||| || |||||||  |||  ||||||||||||||||||||    
T  20193 catgtatacttttgaggtgtatgatttatatttgctgcaactgttgagaatttttata 20136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 11536 - 11416
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgta-tcttgattttatggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgaga 210  Q
    ||||||||||| |||||||||||||||  ||||||| | || || | ||| ||||||| | |||||||| | |||||||||||||||   ||||||||||    
T  11536 atttgtcgggacttggagaacttttatgttgttgtattttttatatcatgtcatgtattc-tttgaagtatatggtttatatccgctgcgactgttgaga 11438  T
Q  211 atttt-tatatgcttgttgttt 231  Q
     |||| || |||| ||||||||    
T  11437 tttttatacatgcatgttgttt 11416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 104035 - 103976
Alignment:
Q  158 atggcatgtatacttttgaagtgtgtggtttatatccgctaaaactgttgagaatttttata 219  Q
    |||||||||||| |||||| |||| ||||| |||||||||  ||||||||||||||||||||    
T  104035 atggcatgtata-ttttgaggtgtatggtt-atatccgctgcaactgttgagaatttttata 103976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 18728 - 18665
Alignment:
Q  112 atttgtcgggatttggagaacttttataatgttgtatcttgattttatggcatgtatacttttga 176  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||| | || |||||||| |||||||    
T  18728 atttgtcgggatttggagaatttttatgatgatgtat-ttgatatcatagcatgtatgcttttga 18665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University