View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3267_high_30 (Length: 250)
Name: NF3267_high_30
Description: NF3267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3267_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 19058146 - 19057907
Alignment:
| Q |
1 |
cattcaagttgaggtaatctgttttgaaaagaattaaagttgatctattttaaaataagtagacacttagtttttaaaaactaataaaataattttgtta |
100 |
Q |
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| T |
19058146 |
cattcaagttgaggtaatctgttttgaaaagaattaaagttgatctattttaaaataagtagacacttagtttttaaaaacaaataaaataattttgtta |
19058047 |
T |
|
| Q |
101 |
aacaattgcttccgttagtataacttttaaatcataatacatgttttgatttgtatacatactacattcaaccaaatcacacaatatatgtatacataat |
200 |
Q |
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| T |
19058046 |
aacaattgcttttgttagtataacttttaaatcataatacatgttttgatttgtatacatactacattcaaccaaatcactcaatatatgtatacataat |
19057947 |
T |
|
| Q |
201 |
acaaaatatatatttccttaaaattttatgatgtcctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
19057946 |
acaaaatatatatttccttaaaattttatgatgtcctttg |
19057907 |
T |
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