View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3267_low_10 (Length: 433)

Name: NF3267_low_10
Description: NF3267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3267_low_10
NF3267_low_10
[»] chr6 (34 HSPs)
chr6 (5-417)||(24474865-24475277)
chr6 (5-248)||(23844342-23844581)
chr6 (5-229)||(27737566-27737786)
chr6 (14-245)||(9516771-9516998)
chr6 (5-181)||(23231862-23232037)
chr6 (5-246)||(27124372-27124606)
chr6 (5-135)||(5624732-5624862)
chr6 (12-85)||(22813605-22813678)
chr6 (5-79)||(1635110-1635183)
chr6 (5-80)||(24657346-24657421)
chr6 (5-91)||(21841577-21841663)
chr6 (5-91)||(25781913-25781999)
chr6 (5-85)||(12183208-12183287)
chr6 (5-102)||(20005795-20005893)
chr6 (6-80)||(22412940-22413014)
chr6 (20-80)||(17382215-17382275)
chr6 (143-247)||(22567824-22567923)
chr6 (144-247)||(9726006-9726104)
chr6 (144-246)||(28933677-28933774)
chr6 (6-246)||(17826974-17827206)
chr6 (6-75)||(19244726-19244794)
chr6 (177-229)||(4339737-4339789)
chr6 (5-91)||(11136031-11136119)
chr6 (6-85)||(14079336-14079416)
chr6 (177-232)||(17729151-17729206)
chr6 (147-246)||(21907417-21907511)
chr6 (183-229)||(2586723-2586769)
chr6 (10-88)||(4339874-4339951)
chr6 (177-247)||(7543005-7543075)
chr6 (183-229)||(21932103-21932149)
chr6 (177-246)||(20005924-20005993)
chr6 (5-68)||(14637026-14637090)
chr6 (177-229)||(18075433-18075485)
chr6 (183-247)||(22566213-22566277)
[»] chr1 (43 HSPs)
chr1 (5-246)||(12208586-12208823)
chr1 (11-246)||(17610139-17610370)
chr1 (13-235)||(25405516-25405733)
chr1 (5-247)||(29242503-29242728)
chr1 (5-187)||(9401544-9401727)
chr1 (5-246)||(15543844-15544080)
chr1 (5-187)||(21666486-21666668)
chr1 (28-247)||(14779549-14779764)
chr1 (13-228)||(16179010-16179220)
chr1 (5-214)||(21334595-21334801)
chr1 (6-80)||(16069440-16069514)
chr1 (5-85)||(21449218-21449299)
chr1 (5-85)||(15807898-15807977)
chr1 (5-85)||(18825785-18825865)
chr1 (5-72)||(22623045-22623112)
chr1 (15-85)||(18529079-18529149)
chr1 (115-246)||(18736228-18736354)
chr1 (5-91)||(727591-727677)
chr1 (5-102)||(18100891-18100985)
chr1 (177-227)||(33190681-33190731)
chr1 (177-246)||(3591698-3591767)
chr1 (143-247)||(15813171-15813269)
chr1 (5-85)||(16916823-16916904)
chr1 (5-50)||(17121378-17121423)
chr1 (183-247)||(17837501-17837565)
chr1 (5-80)||(18736129-18736205)
chr1 (5-85)||(22664349-22664428)
chr1 (177-248)||(16359854-16359924)
chr1 (183-214)||(24267833-24267864)
chr1 (177-244)||(24306350-24306417)
chr1 (183-229)||(13345387-13345433)
chr1 (5-102)||(17359286-17359383)
chr1 (6-91)||(21987872-21987958)
chr1 (11-80)||(22620409-22620478)
chr1 (5-47)||(24214717-24214759)
chr1 (11-72)||(25403974-25404036)
chr1 (144-229)||(21449091-21449171)
chr1 (178-247)||(27117764-27117833)
chr1 (5-50)||(28008281-28008326)
chr1 (33-85)||(16360013-16360064)
chr1 (5-85)||(23179926-23180006)
chr1 (5-85)||(24054108-24054188)
chr1 (5-85)||(32382886-32382965)
[»] chr8 (17 HSPs)
chr8 (5-229)||(24114161-24114379)
chr8 (5-130)||(24110547-24110670)
chr8 (10-229)||(29382243-29382458)
chr8 (5-187)||(24269636-24269818)
chr8 (5-73)||(26394576-26394644)
chr8 (5-187)||(13314869-13315052)
chr8 (5-85)||(23893091-23893171)
chr8 (11-135)||(18448425-18448550)
chr8 (13-246)||(17101790-17102007)
chr8 (5-85)||(16404042-16404122)
chr8 (102-187)||(27659484-27659569)
chr8 (5-80)||(18569201-18569276)
chr8 (5-229)||(25226138-25226357)
chr8 (107-187)||(13697894-13697971)
chr8 (144-246)||(30806509-30806611)
chr8 (177-220)||(2637609-2637652)
chr8 (20-85)||(14528291-14528355)
[»] chr5 (28 HSPs)
chr5 (5-187)||(24245421-24245604)
chr5 (5-135)||(20744547-20744676)
chr5 (6-247)||(17431867-17432103)
chr5 (5-187)||(20315307-20315490)
chr5 (46-238)||(19004146-19004332)
chr5 (5-85)||(28664903-28664983)
chr5 (5-85)||(36175275-36175354)
chr5 (5-74)||(34128788-34128857)
chr5 (5-89)||(20858810-20858894)
chr5 (4-85)||(20563968-20564050)
chr5 (5-85)||(24140577-24140657)
chr5 (5-85)||(16523680-16523761)
chr5 (177-246)||(24852217-24852286)
chr5 (177-246)||(26121369-26121437)
chr5 (4-61)||(39434620-39434677)
chr5 (183-246)||(15375933-15375997)
chr5 (189-248)||(17171610-17171669)
chr5 (5-80)||(26835796-26835870)
chr5 (189-247)||(18937732-18937790)
chr5 (144-246)||(19283872-19283969)
chr5 (193-247)||(20744872-20744926)
chr5 (5-85)||(15375772-15375853)
chr5 (194-247)||(24662212-24662265)
chr5 (177-246)||(26110507-26110575)
chr5 (125-182)||(36175177-36175234)
chr5 (5-89)||(17314990-17315074)
chr5 (189-229)||(23380314-23380354)
chr5 (5-77)||(24852050-24852121)
[»] chr2 (24 HSPs)
chr2 (5-246)||(27908996-27909233)
chr2 (5-247)||(28925506-28925743)
chr2 (6-135)||(17675507-17675637)
chr2 (6-135)||(17635653-17635783)
chr2 (5-247)||(17743354-17743591)
chr2 (5-85)||(29143091-29143171)
chr2 (5-85)||(26603237-26603317)
chr2 (5-85)||(25618697-25618777)
chr2 (5-229)||(29719109-29719328)
chr2 (5-91)||(30411802-30411889)
chr2 (11-246)||(32085448-32085678)
chr2 (8-80)||(25196157-25196229)
chr2 (5-85)||(25530577-25530657)
chr2 (162-229)||(29883226-29883292)
chr2 (20-135)||(31804791-31804908)
chr2 (5-187)||(17349395-17349570)
chr2 (5-102)||(15339363-15339460)
chr2 (144-184)||(25885477-25885517)
chr2 (177-229)||(25888265-25888317)
chr2 (178-229)||(26603396-26603447)
chr2 (5-85)||(23933423-23933502)
chr2 (5-85)||(25535403-25535483)
chr2 (189-229)||(45553132-45553172)
chr2 (5-85)||(45553271-45553349)
[»] chr3 (27 HSPs)
chr3 (5-236)||(17438308-17438534)
chr3 (5-246)||(19908292-19908529)
chr3 (5-124)||(4650328-4650447)
chr3 (6-135)||(932833-932963)
chr3 (5-91)||(8770143-8770229)
chr3 (5-229)||(21301920-21302141)
chr3 (5-91)||(8765241-8765327)
chr3 (177-248)||(20429693-20429764)
chr3 (5-85)||(12754800-12754881)
chr3 (144-229)||(21325342-21325422)
chr3 (5-85)||(2167495-2167574)
chr3 (5-247)||(12411135-12411369)
chr3 (5-85)||(20023430-20023510)
chr3 (10-80)||(19925504-19925575)
chr3 (4-85)||(16229830-16229912)
chr3 (9-89)||(27413778-27413859)
chr3 (5-80)||(8170017-8170093)
chr3 (177-229)||(18458469-18458521)
chr3 (5-85)||(21303232-21303311)
chr3 (11-80)||(18736556-18736624)
chr3 (5-78)||(41508516-41508588)
chr3 (177-229)||(12759389-12759441)
chr3 (5-85)||(12805768-12805847)
chr3 (9-85)||(21325483-21325558)
chr3 (5-85)||(8883000-8883081)
chr3 (33-102)||(20429836-20429904)
chr3 (177-229)||(3116464-3116515)
[»] scaffold0035 (1 HSPs)
scaffold0035 (10-187)||(69952-70129)
[»] chr4 (31 HSPs)
chr4 (5-246)||(13908839-13909076)
chr4 (45-247)||(16730318-16730514)
chr4 (15-247)||(17216801-17217031)
chr4 (5-247)||(15164751-15164987)
chr4 (5-135)||(17709845-17709975)
chr4 (5-247)||(19492589-19492815)
chr4 (5-246)||(7582282-7582519)
chr4 (144-247)||(9737521-9737624)
chr4 (5-85)||(25097962-25098043)
chr4 (177-245)||(11490518-11490586)
chr4 (5-85)||(19562052-19562133)
chr4 (5-85)||(25094695-25094776)
chr4 (5-78)||(25121104-25121176)
chr4 (5-80)||(17026221-17026297)
chr4 (5-80)||(24639338-24639414)
chr4 (144-247)||(19882624-19882722)
chr4 (144-247)||(25121243-25121340)
chr4 (7-229)||(13128753-13128971)
chr4 (177-229)||(11700614-11700666)
chr4 (144-232)||(13992893-13992976)
chr4 (14-246)||(17671987-17672214)
chr4 (177-229)||(22176007-22176059)
chr4 (191-246)||(19092280-19092335)
chr4 (168-246)||(22357573-22357649)
chr4 (127-229)||(5679207-5679304)
chr4 (11-88)||(40227914-40227992)
chr4 (40-104)||(12578179-12578240)
chr4 (177-246)||(14648880-14648949)
chr4 (5-85)||(17337012-17337093)
chr4 (177-230)||(19374858-19374910)
chr4 (5-85)||(26115783-26115862)
[»] chr7 (40 HSPs)
chr7 (5-187)||(1848105-1848287)
chr7 (13-229)||(18368864-18369077)
chr7 (11-246)||(8978889-8979120)
chr7 (5-135)||(20582347-20582477)
chr7 (5-187)||(2563856-2564040)
chr7 (75-245)||(13759808-13759973)
chr7 (13-232)||(3329542-3329758)
chr7 (5-187)||(5108604-5108787)
chr7 (5-135)||(8053940-8054069)
chr7 (5-91)||(13418657-13418743)
chr7 (5-247)||(3734580-3734817)
chr7 (6-85)||(7397283-7397362)
chr7 (5-135)||(39273053-39273183)
chr7 (102-229)||(8054464-8054586)
chr7 (5-135)||(8877512-8877643)
chr7 (5-80)||(17829716-17829790)
chr7 (5-91)||(13277627-13277713)
chr7 (5-74)||(11803221-11803290)
chr7 (5-85)||(18662582-18662661)
chr7 (144-246)||(5530006-5530103)
chr7 (7-80)||(6006085-6006157)
chr7 (5-85)||(6042592-6042672)
chr7 (183-244)||(9864377-9864438)
chr7 (5-85)||(16058910-16058991)
chr7 (17-90)||(17077252-17077325)
chr7 (5-80)||(4785987-4786062)
chr7 (5-80)||(17153031-17153106)
chr7 (5-80)||(140263-140337)
chr7 (184-247)||(18495357-18495420)
chr7 (7-85)||(31493068-31493145)
chr7 (177-246)||(7318258-7318327)
chr7 (5-85)||(9131052-9131132)
chr7 (177-246)||(9574392-9574461)
chr7 (197-229)||(2453735-2453767)
chr7 (144-228)||(7492280-7492358)
chr7 (147-229)||(9130908-9130986)
chr7 (177-229)||(10584531-10584583)
chr7 (177-229)||(10587069-10587121)
chr7 (177-229)||(10937604-10937656)
chr7 (119-187)||(11803119-11803187)
[»] scaffold0638 (1 HSPs)
scaffold0638 (7-158)||(701-854)
[»] scaffold0671 (1 HSPs)
scaffold0671 (5-85)||(572-652)
[»] scaffold1869 (1 HSPs)
scaffold1869 (5-124)||(266-386)
[»] scaffold0056 (2 HSPs)
scaffold0056 (5-85)||(21406-21486)
scaffold0056 (5-85)||(25116-25196)
[»] scaffold0263 (1 HSPs)
scaffold0263 (5-132)||(15740-15868)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-85)||(39727-39806)
[»] scaffold0672 (1 HSPs)
scaffold0672 (177-247)||(1718-1788)
[»] scaffold0019 (1 HSPs)
scaffold0019 (183-229)||(11242-11288)
[»] scaffold0008 (2 HSPs)
scaffold0008 (177-247)||(54844-54914)
scaffold0008 (177-246)||(48235-48304)
[»] scaffold0386 (1 HSPs)
scaffold0386 (5-85)||(5982-6063)
[»] scaffold0102 (1 HSPs)
scaffold0102 (5-114)||(35652-35759)
[»] scaffold0090 (1 HSPs)
scaffold0090 (178-226)||(7458-7506)
[»] scaffold0054 (2 HSPs)
scaffold0054 (178-238)||(72065-72125)
scaffold0054 (5-97)||(72139-72232)
[»] scaffold0034 (1 HSPs)
scaffold0034 (5-80)||(76550-76626)
[»] scaffold0001 (1 HSPs)
scaffold0001 (6-85)||(69221-69301)
[»] scaffold0043 (1 HSPs)
scaffold0043 (11-78)||(89737-89803)
[»] scaffold0238 (1 HSPs)
scaffold0238 (189-247)||(19095-19152)
[»] scaffold0006 (1 HSPs)
scaffold0006 (183-229)||(18796-18842)
[»] scaffold0155 (1 HSPs)
scaffold0155 (5-85)||(35871-35951)
[»] scaffold0005 (1 HSPs)
scaffold0005 (177-246)||(168343-168412)
[»] scaffold0622 (1 HSPs)
scaffold0622 (177-229)||(730-782)
[»] scaffold0093 (1 HSPs)
scaffold0093 (5-80)||(43211-43287)
[»] scaffold0016 (1 HSPs)
scaffold0016 (189-229)||(12111-12151)


Alignment Details
Target: chr6 (Bit Score: 325; Significance: 0; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 5 - 417
Target Start/End: Complemental strand, 24475277 - 24474865
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  24475277 gattcgaagaatcctaaccactacttacttttctgcaaccaaaacaggtaaacttgttttgttgcaaacagataaagattgcaacctttctaacccttta 24475178  T
Q  105 tcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||||| |||||||||||||    
T  24475177 tcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaataacaattcttgtggatgcgatactatactataattatcattttatt 24475078  T
Q  205 acttgataaacaatttagtacacttaccatatccgaccatcaacgtactagttcgtaaccgtgtcaatatactttagtttttcagttaaatatatttctt 304  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||||    
T  24475077 acttgataaacaatttaatacacttaccatatccgaccatcaacgtactagttcgtaaccgtgtcaatatactttgttattacagttaaatatatttctt 24474978  T
Q  305 tcattaaactactgattttcgtgtactgcatgtgaaagtgaattcatagtatcgaatcaaacaaattcaaagttagatacttacattaccaatgtgtttg 404  Q
    |||||||||   |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  24474977 tcattaaaccgttgattttcgtgtactgcatgtgaaagtgaattcataatattgaatcaaacaaattcaaagttagatacttaaattaccaatgtgtttg 24474878  T
Q  405 ttgcgtaaatatt 417  Q
    |||||||||||||    
T  24474877 ttgcgtaaatatt 24474865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 5 - 248
Target Start/End: Original strand, 23844342 - 23844581
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-ttt 103  Q
    |||||||| ||||||||||||| |||| |||| | |||||||||||| |||||||| | | ||||||||||||||| |||| ||| |||||||||| |||    
T  23844342 gattcgaaaaatcctaaccgctgcttacttttatgcaaccaaaacaggtaaacttggtctattgcaaacagataaaaattgcaacatttctaaccctttt 23844441  T
Q  104 atcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
    ||||||| ||||||||||||||||||||||||  |||| |||||||||||||||| | ||| | | | |||| |     ||||| |||||||||||||||    
T  23844442 atcttttatatcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatg-----atactctacttatcattttat 23844536  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatcaac 248  Q
    |||||| ||||| |||| ||||||||| |||||||||||||||||    
T  23844537 tacttggtaaacgatttggtacacttatcatatccgaccatcaac 23844581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 27737566 - 27737786
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||||||||||||||||| |||| |||| | |||| ||||||| |||||||||| ||||||||||||||||| |||| || || |||||||| |||    
T  27737566 gattcgaagaatcctaaccgctgcttacttttttgcaacaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-ctctctaaccc-tta 27737663  T
Q  105 tctt---ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
    ||||   |||||||||||||||||||||||||||  ||||  ||||||||||||||| | ||| ||||||| || |     ||||| ||||||||| |||    
T  27737664 tctttcattttatcgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatg-----atactctacttatcacttt 27737758  T
Q  202 attacttgataaacaatttagtacactt 229  Q
    |||||||| ||||| |||||||||||||    
T  27737759 attacttggtaaacgatttagtacactt 27737786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 9516998 - 9516771
Alignment:
Q  14 aatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt-atctttttt 112  Q
    ||||||||  ||| |||| |||||| ||| ||||| || |||||||||| |||||| ||||||||||  ||  ||||||||||||||||| ||||||| |    
T  9516998 aatcctaatggctgcttaattttctgcaatcaaaataggtaaacttgctatgttgctaacagataaaacttacaacctttctaacccttttatcttttat 9516899  T
Q  113 atcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgata 212  Q
    |||||||||||||||||||||||  |||| |||||||||||||||| | ||| | |||||||||||     |||| ||||||||| ||||||||| | ||    
T  9516898 atcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacga-----tactctacttatcactttattactaggta 9516804  T
Q  213 aacaatttagtacacttaccatatccgaccatc 245  Q
    ||| |||| ||||||||  |||||| |||||||    
T  9516803 aacgatttggtacacttgtcatatctgaccatc 9516771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 23231862 - 23232037
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||||||||||||||| || | |||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||| |||| ||   |||||| || |||    
T  23231862 gattcgaagaatcctaaacgttgcttacttttctataaccaaaacaagtaaatttgctctgttgcaaacagataaa-attgcaagacttctaa-ccgtta 23231959  T
Q  105 tcttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatac 181  Q
     ||||| ||||||| |||||||||||||||||  ||||  ||||||||||||| | | ||||||| |||||| |||||    
T  23231960 acttttatatcgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgatac 23232037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 27124372 - 27124606
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||| ||||||| |||||||| |||| |||||| ||||||| |||| |||||||||| ||||||||||| ||||| |||| ||   || |||||| |||    
T  27124372 gattcaaagaatcttaaccgctgcttacttttctgcaaccaagacaggtaaacttgctctgttgcaaacatataaaaattggaagtcttttaaccc-tta 27124470  T
Q  105 tcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttatt 204  Q
    | |||| ||||||||| || |||||||||||  || |  |||||||  |||||| | ||| | |||     |||||| ||| |||| |||||| ||||||    
T  27124471 tgttttatatcgtcaagtt-caaaaataagtaacgagaattgtttgctcgaaacgacaatccatgt-----cgatacgataatataattatcactttatt 27124564  T
Q  205 acttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| |||| |||||||| |||||| |||||||||    
T  27124565 acttggtaaacgatttggtacactttccatattcgaccatca 27124606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 5624862 - 5624732
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    |||||||||||||||||||||| |||| |||||| ||||||||| | | ||||| |||| | || |||||||||||| |||| |||||||||||||| ||    
T  5624862 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaagccggtaaac-tgctctattacaaacagataaaaattgcaacctttctaaccc-tt 5624765  T
Q  104 atcttttttatcgtc-aacttacaaaaataagt 135  Q
    | ||||| ||||||| |||||||||||||||||    
T  5624764 aacttttctatcgtcaaacttacaaaaataagt 5624732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 22813605 - 22813678
Alignment:
Q  12 agaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  22813605 agaatcataaccgctacttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaacaaataaaaattg 22813678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 1635183 - 1635110
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataa 79  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||| |  |||||||||||||||||||||||||    
T  1635183 gattcgaagaatcctaaccgctgtttacttttctacaaccaaaaca-tgtaacttgctttgttgcaaacagataa 1635110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 24657346 - 24657421
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||| ||||||||| |||| |||||| |||||||||||| |||| | ||| |||||||||||||||||    
T  24657346 gattcgaagaattctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaa 24657421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 21841577 - 21841663
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    ||||||||||||||||||| ||||||  |||  | |||||||||||  ||||||||||||||||||| |||||||| |||| |||||    
T  21841577 gattcgaagaatcctaaccactacttcatttcttgcaaccaaaacaagtaaacttgctttgttgcaatcagataaaaattgcaacct 21841663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 25781999 - 25781913
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    ||||||||||||||||||  ||  ||| |||||| ||||||||| || |||||||||| ||||||||||||||||| |||| |||||    
T  25781999 gattcgaagaatcctaactactgtttacttttctgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaacct 25781913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 12183208 - 12183287
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||| | |||| ||||||  ||||||||||| | |||||||| ||||||||||||||||| ||||    
T  12183208 gattcgaagaatcctaaccgttgcttacttttctgtaaccaaaacaggt-aacttgctatgttgcaaacagataaacattg 12183287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 20005795 - 20005893
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctt 102  Q
    ||||||||||||| |||||||| | ||  ||||| ||||||||| ||| |||||| ||| ||||||||||| ||||| |||| || |||||||||||||    
T  20005795 gattcgaagaatcttaaccgctgcatacctttctgcaaccaaaaacaggtaaactcgctctgttgcaaacaaataaaaattgcaagctttctaaccctt 20005893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 22412940 - 22413014
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||| |||| | ||| |||| ||||||||||||    
T  22412940 attcgaagaatcctaaccgctacttactttcctgtaaccaaaacaggtaaattcgctctgttacaaacagataaa 22413014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 17382275 - 17382215
Alignment:
Q  20 aaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||||| |||| |||||| |||||||||||  |||||||||| |||||||||||||||||    
T  17382275 aaccgctgcttacttttctgcaaccaaaacatgtaaacttgctctgttgcaaacagataaa 17382215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 247
Target Start/End: Complemental strand, 22567923 - 22567824
Alignment:
Q  143 gttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacc 242  Q
    |||||||||||||||||| ||| | ||||||||| |||||||||| |     |||  |||||||||| |||||||||| |||||||| ||  ||||||||    
T  22567923 gttgtttggacgaaaccacaatccatgtggatacaatactatacttt-----tcacgttattacttggtaaacaatttggtacacttgcctaatccgacc 22567829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 9726104 - 9726006
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    ||||||||||||||| | ||| | ||||||||||||||| ||||     ||||| ||||||||||| ||||| |||| |||||||| ||  |||||||||    
T  9726104 ttgtttggacgaaacgacaatccatgtggatacgatactctact-----tatcactttattacttggtaaacgatttggtacacttgcctaatccgacca 9726010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 28933677 - 28933774
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    ||||||||||||||| | ||| ||||||||||||||||| ||||     ||||| ||||||| ||| |||||||| | |||||||| ||  |||||||||    
T  28933677 ttgtttggacgaaacgataatccttgtggatacgatactctact-----tatcactttattatttgctaaacaatatggtacactttcctaatccgacca 28933771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 17826974 - 17827206
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||| |||||| ||||||| | |||| |||||| ||||||||| ||  |||||| ||| ||||||||||| ||||| |||| |||  || |||||||| |    
T  17826974 attcaaagaattctaaccgttgcttacttttctgcaaccaaaaacaagtaaact-gctatgttgcaaacatataaaaattgcaactcttttaaccctt-a 17827071  T
Q  105 tcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttatt 204  Q
    |||||| ||| |||||   | ||||||||||  ||||  ||||||||| ||||| | ||| | |||||||||||||||   ||||  |||| | ||||||    
T  17827072 tcttttatattgtcaaa--aaaaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatact---ctat--ttataactttatt 17827164  T
Q  205 acttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||  ||||| | || |||||||| |||||||| |||||||    
T  17827165 acttattaaacgagttggtacacttgccatatccaaccatca 17827206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 19244794 - 19244726
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacag 75  Q
    |||| ||||||||| ||| ||||||| ||||||||||||||| ||| | |||||||| ||||||||||||    
T  19244794 attcaaagaatccttaccactacttacttttctacaaccaaaccaggt-aacttgctctgttgcaaacag 19244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 4339789 - 4339737
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| ||||||||| ||||||| |||||||||||||| ||||||||    
T  4339789 gatacaatactctacttatcactttattatttgataaacaatttggtacactt 4339737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 11136119 - 11136031
Alignment:
Q  5 gattcgaagaatcctaaccgctactta-tttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    |||||||||||||||||||||| |||| ||||| | ||||| ||||||| |||  | ||| ||||||||||||||||| |||| |||||    
T  11136119 gattcgaagaatcctaaccgcttcttactttttttgcaaccaaaaacaggtaagttcgctctgttgcaaacagataaaaattgcaacct 11136031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 14079336 - 14079416
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||| ||||||||| |||| ||||||  ||||||||  ||  |||||| |||||||||||||||||||| ||||    
T  14079336 attcgaagaattctaaccgctgcttacttttctgtaaccaaaaataggaaaacttcctttgttgcaaacagataaaaattg 14079416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 17729206 - 17729151
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttacc 232  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| |||| |||||||||||    
T  17729206 gatacgatactctacttatcactttattacttggtaaacgatttggtacacttacc 17729151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 21907511 - 21907417
Alignment:
Q  147 tttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||||||||||| | ||| ||||||||||||||||| ||||     ||||| ||||||||||| ||||| |||| ||| |||| ||  ||||||||||||    
T  21907511 tttggacgaaacgacaatccttgtggatacgatactttact-----tatcactttattacttggtaaacgatttggtatacttgcctaatccgaccatca 21907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 2586769 - 2586723
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||||||||||||| || |||||||| |||||||||| ||||||||    
T  2586769 atactatacttatcacttcattacttggtaaacaatttggtacactt 2586723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4339951 - 4339874
Alignment:
Q  10 gaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaa 88  Q
    |||||| ||| ||||||  ||| |||||| |||||||||||| | ||||||||| |||||||||| ||||| |||||||    
T  4339951 gaagaaccctgaccgctggttacttttctgcaaccaaaacaggt-aacttgcttagttgcaaacaaataaatattgtaa 4339874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 7543005 - 7543075
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||| ||||| ||||||||| ||||||||||| ||||||||||  |||| || ||  |||||||||||||    
T  7543005 gatacgatactttacttatcactttattacttggtaaacaatttgatacatttgcctaatccgaccatcaa 7543075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 21932103 - 21932149
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  21932103 atactctacttatcactttattacttggtaaacaatttggtacactt 21932149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 20005924 - 20005993
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| | ||||||| ||||||||||| ||||| |||| ||||||||  | |||||||||||||    
T  20005924 gatacgatactctgcttatcactttattacttggtaaacgatttggtacacttgtcgtatccgaccatca 20005993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 14637090 - 14637026
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttg 68  Q
    ||||||||||||||||  |||| |||| |||||| ||||| ||||||| |||||||||| |||||    
T  14637090 gattcgaagaatcctattcgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttg 14637026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 18075433 - 18075485
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| | ||||||| ||||||||||| |||||||||| ||||||||    
T  18075433 gatacgatactctgcttatcactttattacttggtaaacaatttcgtacactt 18075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 22566213 - 22566277
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||| ||||||||| ||||||||||| |||| ||||| ||||| |||||  || ||||||||||    
T  22566213 atactctacttatcactttattacttggtaaataatttggtacatttacccaattcgaccatcaa 22566277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 12208823 - 12208586
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-ttt 103  Q
    |||||||||||||||||||||| |||| |||||| || | ||||||| |||||||||| |||||||||||||| || | || |||||||||||||| |||    
T  12208823 gattcgaagaatcctaaccgctgcttacttttctgcagctaaaacaggtaaacttgctctgttgcaaacagattaaaactgaaacctttctaaccctttt 12208724  T
Q  104 atcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
    ||||||| ||||||||||||||||||||||||  ||||  ||||||||||||||| | ||| | |||||||| |     ||| | ||||||||| |||||    
T  12208723 atcttttatatcgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatg-----atattctacttatcactttat 12208629  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||||    
T  12208628 tacttggtaaacgatttagtacacttgccatatctgaccatca 12208586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 17610139 - 17610370
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttt 109  Q
    |||||||||||||||| |||| |||||| ||||||||| ||| |||||||||| ||||||||||| ||||| |||  || |||||||||| |||| ||||    
T  17610139 aagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaattacaagctttctaacc-tttaacttt 17610237  T
Q  110 tttatcgtcaa-cttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattactt 208  Q
    | ||||||||| |||||||||||||||  || |  ||||||||||||||| | ||| | ||||||||||||||| ||||     ||| | ||||||||||    
T  17610238 tatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctact-----tataactttattactt 17610332  T
Q  209 gataaacaatttagtacacttaccatatccgaccatca 246  Q
    | ||||| |||| ||||||||  |||||||||||||||    
T  17610333 ggtaaacgatttggtacacttgtcatatccgaccatca 17610370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 235
Target Start/End: Original strand, 25405516 - 25405733
Alignment:
Q  13 gaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttttt 111  Q
    |||||||||||||| |||| ||| || ||||||||| ||  |||||||||| ||||||||||| ||||| |||| || ||||||||||||| | |||||     
T  25405516 gaatcctaaccgctgcttacttt-ctgcaaccaaaaacaagtaaacttgctctgttgcaaacaaataaaaattgcaagctttctaacccttaaactttta 25405614  T
Q  112 tatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgat 211  Q
    ||||||||||||||||||||||||  || |   |||||||||||||| | ||| ||||||||||||     ||||| ||||||||| ||||||||||| |    
T  25405615 tatcgtcaacttacaaaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacg-----atactttacttatcactttattacttggt 25405709  T
Q  212 aaacaatttagtacacttaccata 235  Q
    |||| | || |||||||| |||||    
T  25405710 aaacgacttggtacacttgccata 25405733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 29242728 - 29242503
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||| ||| |||||||||||| |||| |||| | |||||||||||| |||||||||| ||||||||||||||||| |||| |||||            |    
T  29242728 gattcaaagtatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct------------a 29242641  T
Q  105 tcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttatt 204  Q
     ||||| ||||||||||||||||||||| ||  ||||  ||||||||| ||||| | |||   | ||||||||     ||||| ||||||||| ||||||    
T  29242640 acttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacg-----atactctacttatcactttatt 29242546  T
Q  205 acttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  29242545 acttgataaacaatttggtacacttgccatatccgaccatcaa 29242503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 9401727 - 9401544
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||||||||||||||||||||||||| |||| |  ||||||||||| ||||||| || ||||||||||||||||| |||| || || ||||| || |||    
T  9401727 gattcgaagaatcctaaccgctacttacttttttgtaaccaaaacaggtaaacttactctgttgcaaacagataaaaattgcaa-ctctctaa-ccgtta 9401630  T
Q  105 tctt---ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    ||||   || ||||  ||||||||||||||||||  ||||  ||||||||||||||| | ||||| ||||||||||||||| ||||    
T  9401629 tcttttattatatcaacaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctact 9401544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 15543844 - 15544080
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaac-caaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    |||||||||||||||||||| | |||| |||||| ||||  ||||||| ||||||| || ||||||||||| ||||| |||| |||  || |||||| ||    
T  15543844 gattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaactcttttaaccc-tt 15543942  T
Q  104 atcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
    ||||||| ||||||||| ||| ||||||||||  | ||  ||||||||||||||| | ||||   |||||||||     ||||| ||||||||| |||||    
T  15543943 atcttttatatcgtcaaattaaaaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacg-----atactctacttatcactttat 15544037  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||||| ||||| |||| |||||||| ||||||| ||| ||||    
T  15544038 tacttggtaaacgatttggtacacttgccatatctgacaatca 15544080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 21666486 - 21666668
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagatt-gtaacctttctaacccttt 103  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||| |||||||| | | ||||||||||||||| |||  ||  |||| |||||| ||    
T  21666486 gattcgaagaatcctaaccattgcttacttttctacaaccaaaacaggtaaacttgttgtcttgcaaacagataaaaattactagtctttttaaccc-tt 21666584  T
Q  104 atcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    ||||||| ||||||||||||| ||||||||||  || |  ||||||||||||||  | ||| | ||||||||||||||| ||||    
T  21666585 atcttttatatcgtcaacttataaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctact 21666668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 14779764 - 14779549
Alignment:
Q  28 cttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttttt--tatcgtcaacttac 125  Q
    |||| |||||| |||||||||||  |||||||| | ||||| ||||| ||||| |||| |||| |||||| ||||| |||||||  ||||||||||||||    
T  14779764 cttacttttcttcaaccaaaacaagtaaacttgatatgttgtaaacaaataaaaattgcaacccttctaa-cctttttcttttttatatcgtcaacttac 14779666  T
Q  126 aaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtac 225  Q
    |||||||| |  ||||   |||||||||||||| | ||| | |||||||| |     ||||| || ||||||  |||||||||| ||||  |||| ||||    
T  14779665 aaaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatg-----atactctaattatcacattattacttggtaaatgatttggtac 14779571  T
Q  226 acttaccatatccgaccatcaa 247  Q
    |||| |||||||||||||||||    
T  14779570 acttgccatatccgaccatcaa 14779549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 228
Target Start/End: Complemental strand, 16179220 - 16179010
Alignment:
Q  13 gaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttttt 111  Q
    |||||||||||||| |||| |||||| |||||||||  || |||||||||| |||||||| |||||||| |||| ||    |||||||||| || ||||     
T  16179220 gaatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaagacatctaaccctt-atatttta 16179122  T
Q  112 tatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgat 211  Q
    ||||||||||||||||||||||||  |  |  ||||||||||||||| |   | ||| ||||||||     ||||| ||||||||| ||||||||||| |    
T  16179121 tatcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgactttccttttggatacg-----atactctacttatcagtttattacttgtt 16179027  T
Q  212 aaacaatttagtacact 228  Q
    |||| |||| |||||||    
T  16179026 aaacgatttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 21334595 - 21334801
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaaga-ttgtaac-ctttctaaccct 101  Q
    ||||||||||||||||||||||  ||| |||||| |||||||||  || ||| |||||| | ||||||||||||||| | ||||||  ||||| |||| |    
T  21334595 gattcgaagaatcctaaccgctgtttacttttcttcaaccaaaaataggtaa-cttgctattttgcaaacagataaaaaattgtaagactttcaaaccat 21334693  T
Q  102 ttatcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
    ||||||||| ||||||||||||| ||||||||||  || |  ||||||||| ||||  | ||||| |  |||||||     ||||||||||||||| |||    
T  21334694 ttatcttttatatcgtcaacttaaaaaaataagtaacgagaattgtttggaagaaatgacaattcctccggatacg-----atactatacttatcacttt 21334788  T
Q  202 attacttgataaa 214  Q
    |||||||||||||    
T  21334789 attacttgataaa 21334801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 16069440 - 16069514
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  16069440 attcgaagaatcctaactgctgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaagcagataaa 16069514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 21449299 - 21449218
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||| |||| |||||| || |||||| |||||||||||||| ||||||||||||||||| ||||    
T  21449299 gattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaattg 21449218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 15807898 - 15807977
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||| | | |||||||| ||||||||||| ||||| ||||    
T  15807898 gattcaaagaatcctaatcgctgcttatttttctacaaccaaaactggt-aacttgctctgttgcaaacaaataaaaattg 15807977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 18825865 - 18825785
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| ||||||||| | |||| |||| ||||||||||||||||||  |||| ||||||||||| ||||||||||| ||||    
T  18825865 gattcaaagaatccttatcgctgcttacttttctacaaccaaaacaagtaaatttgctttgttgtaaacagataaaaattg 18825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 22623112 - 22623045
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaa 72  Q
    |||| ||||||||||||| ||| |||| |||||| |||||||||||| |||||||||| |||||||||    
T  22623112 gatttgaagaatcctaacagctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaa 22623045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 18529079 - 18529149
Alignment:
Q  15 atcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||| || |||| ||||||||||||||||||| |||||||||| |||||||||  |||||| ||||    
T  18529079 atcctaaccactgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaaattgataaaaattg 18529149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 246
Target Start/End: Original strand, 18736228 - 18736354
Alignment:
Q  115 cgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaa 214  Q
    ||||||| |||||||||||||  ||    ||||||| ||||||| | ||| | ||||||||||||||   ||||  ||||||| ||||||||||| ||||    
T  18736228 cgtcaacctacaaaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatac---acta--cttatcactttattacttgttaaa 18736322  T
Q  215 caatttagtacacttaccatatccgaccatca 246  Q
    | |||| |||||||| ||||||||||||||||    
T  18736323 cgatttggtacacttgccatatccgaccatca 18736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 727677 - 727591
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    ||||||||||||| |||||||| |||   ||||| |||||||||||| |||| || || ||||||||||| ||||| |||| |||||    
T  727677 gattcgaagaatcttaaccgctgctttactttctgcaaccaaaacaggtaaattttctatgttgcaaacaaataaaaattgcaacct 727591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 18100891 - 18100985
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctt 102  Q
    ||||| || |||| |||||||| |||| |||||| |||||||||||  ||| |||||| ||||||||||||||||| |||| ||  ||||||||||||    
T  18100891 gattcaaataatcataaccgctgcttacttttctgcaaccaaaacatgtaa-cttgctatgttgcaaacagataaaaattgcaa--tttctaaccctt 18100985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 33190731 - 33190681
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacac 227  Q
    |||| |||||| ||||||||||||||||||||||||||| |||| ||||||    
T  33190731 gatattatactctacttatcattttattacttgataaacgatttggtacac 33190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 3591698 - 3591767
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| || |||||| ||||||||||||||||| |||| |||||||| ||  ||||||||||||    
T  3591698 gatacgatactctatttatcactttattacttgataaacgattttgtacacttgcctaatccgaccatca 3591767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 15813171 - 15813269
Alignment:
Q  143 gttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacc 242  Q
    |||||||||||| ||| ||||| ||||||||||||||| |       |||||||| |||||||| |||||||| |||| |||||||| ||  ||||||||    
T  15813171 gttgtttggacgcaacgaaaatccttgtggatacgatagtc------acttatcactttattacatgataaacgatttggtacacttgcctaatccgacc 15813264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 16916823 - 16916904
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||| ||||| |||| |||||| ||||| ||||||| |||| | ||| ||||||||| ||||||| ||||    
T  16916823 gattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattg 16916904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 17121378 - 17121423
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaaca 50  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||    
T  17121378 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaca 17121423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 17837565 - 17837501
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||| ||||||| | ||||||||||| |||||||||| |||||||| ||  |||||||||||||    
T  17837565 atactctacttataactttattacttggtaaacaatttggtacacttgcctaatccgaccatcaa 17837501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 18736129 - 18736205
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||||||||||||| |||||| | || |||||| ||||| |||| || |||||||||| | |||||||||||||||    
T  18736129 gattcgaagaatccttaccgctgcctacttttctgcaaccaaaaataggtaaacttgctctattgcaaacagataaa 18736205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 22664428 - 22664349
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||| |||||||||||||||| |||||| ||||||||||| |  |||||||| |||| |||||| ||||| ||||    
T  22664428 gattcaaagagtcctaaccgctacttacttttctgcaaccaaaaca-tgtaacttgctctgttacaaacaaataaaaattg 22664349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 16359924 - 16359854
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaac 248  Q
    ||||| |||||||||||| |||||||||||||| ||||| |||| |||||||| ||  ||| ||||||||||    
T  16359924 gatacaatactatactta-cattttattacttggtaaacgatttggtacacttgcctaatctgaccatcaac 16359854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 214
Target Start/End: Original strand, 24267833 - 24267864
Alignment:
Q  183 atactatacttatcattttattacttgataaa 214  Q
    ||||||||||||||||||||||||||||||||    
T  24267833 atactatacttatcattttattacttgataaa 24267864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 24306350 - 24306417
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccat 244  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| | || |||||||| ||| ||||||||||    
T  24306350 gatacgatactctacttatcactttattacttggtaaacgacttggtacacttgccaaatccgaccat 24306417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 13345387 - 13345433
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  13345387 atactctacttatcactttattacttggtaaacaatttggtacactt 13345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 17359383 - 17359286
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctt 102  Q
    |||||||||||||||||||||  |||| |||| | ||||| ||||||| |||| ||||| |||||| | |||||||| |||| || || ||||||||||    
T  17359383 gattcgaagaatcctaaccgcatcttacttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaattgcaa-ctctctaaccctt 17359286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 21987872 - 21987958
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    |||| ||||||||| |||||| |||| |||| | ||||||||| ||| |||| ||||| ||||||||||| ||||| |||| |||||    
T  21987872 attcaaagaatccttaccgctgcttacttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgcaacct 21987958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 22620478 - 22620409
Alignment:
Q  11 aagaatcctaaccgctacttat-ttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||||| |||||||| ||||  ||||||||||||||||||| ||| || | |||||||||||||||||||    
T  22620478 aagaatcttaaccgctgcttacattttctacaaccaaaacaggtaa-ctcgatttgttgcaaacagataaa 22620409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 24214759 - 24214717
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaa 47  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||    
T  24214759 gattcaaagagtcctaaccgctacttatttttctgcaaccaaa 24214717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 25403974 - 25404036
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaa 72  Q
    ||||||||||||||||||||| ||||||  |||| ||||||| |||| ||||| |||||||||    
T  25403974 aagaatcctaaccgctacttacttttctggaaccaaaaacaggtaaagttgctctgttgcaaa 25404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 21449171 - 21449091
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    |||||||| |||||| | ||| ||||||||||||||||| ||||     ||||| ||||||||||| ||||| |||| ||||||||    
T  21449171 ttgtttggccgaaacgacaatccttgtggatacgatactctact-----tatcactttattacttggtaaacgatttggtacactt 21449091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 27117764 - 27117833
Alignment:
Q  178 atactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||| ||||| ||||||||| ||||||||||| ||||| |||| ||| |||| ||  |||||||||||||    
T  27117764 atacaatactctacttatcactttattacttggtaaacgatttggtaaacttgcctaatccgaccatcaa 27117833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 28008326 - 28008281
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaaca 50  Q
    ||||| |||||||||||||||| |||| |||||| |||||||||||    
T  28008326 gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaaca 28008281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 16360064 - 16360013
Alignment:
Q  33 ttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||| |||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  16360064 ttttctgcaaccaaaacaggtaa-cttgctttgttgcaaacaaataaaaattg 16360013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 23180006 - 23179926
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||| |||||| |||||| |||| |||||| ||||||||| || |||| ||| | | ||| ||||||||||| ||||    
T  23180006 gattcgaataatccttaccgctgcttacttttctccaaccaaaaaaggtaaaattgttattttgtaaacagataaaaattg 23179926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 24054188 - 24054108
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||| |   |||  ||||| ||||||||||||  |||| | ||| ||||||||||||||||| ||||    
T  24054188 gattcgaagaatcctaactgtcgctttcttttcaacaaccaaaacaagtaaattcgctctgttgcaaacagataaaaattg 24054108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 32382886 - 32382965
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||| ||| || |  ||||| |||||||||||| |||  ||||| ||||||||||||||||| ||||    
T  32382886 gattcaaagaatcctaacggctgctaacatttctgcaaccaaaacaggtaat-ttgctctgttgcaaacagataaaaattg 32382965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 24114161 - 24114379
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||||||||||||||||| |||| |||||    |||||||||| |||||||||| || |||||||||||||| |||| ||||||| |||||||| |    
T  24114161 gattcgaagaatcctaaccgctgcttacttttcagataccaaaacaggtaaacttgctctgctgcaaacagataaaaattgcaacctttataaccctt-a 24114259  T
Q  105 tcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttatt 204  Q
    |||||| ||||||||||||||||||||||||  |||  |||||||||||||||| | ||| | || |||||||     ||||| ||||||||||||||||    
T  24114260 tcttttatatcgtcaacttacaaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacg-----atactctacttatcattttatt 24114354  T
Q  205 acttgataaacaatttagtacactt 229  Q
    ||||| |||||||||| ||||||||    
T  24114355 acttggtaaacaatttggtacactt 24114379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 24110547 - 24110670
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||| |||||||||| || |||| |||||| |||||||||||| ||||||| || ||||||||||||||||| |||| ||| |||||||||| |||    
T  24110547 gattcgaataatcctaacccctgcttacttttctgcaaccaaaacagataaacttcctctgttgcaaacagataaa-attgcaacttttctaaccc-tta 24110644  T
Q  105 tcttttttatcgtcaacttacaaaaa 130  Q
    | |||| |||||||||||||||||||    
T  24110645 tgttttatatcgtcaacttacaaaaa 24110670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 29382243 - 29382458
Alignment:
Q  10 gaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatctt 108  Q
    |||||||||||||| || |||| |||||| |||||||||  || || ||||||| ||||||||||||||||| |||| || |||||||||| || | |||    
T  29382243 gaagaatcctaaccactgcttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaagctttctaaccattaa-ctt 29382341  T
Q  109 ttttatcgtcaa-cttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattact 207  Q
    || ||||||||| |||||||||||||||  |||   ||||||||| ||||| | ||| | ||||||||||||||| ||||     ||||| |||||||||    
T  29382342 ttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctact-----tatcactttattact 29382436  T
Q  208 tgataaacaatttagtacactt 229  Q
    || ||||| |||| ||||||||    
T  29382437 tggtaaacgatttggtacactt 29382458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 24269818 - 24269636
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    |||||||||||||||||||||| |||| |||||| ||||| ||||||| ||||| | || |||||||||||||||||||||| |||  ||| ||| | ||    
T  24269818 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaac-tactctgttgcaaacagataaagattgcaactattcaaactc-tt 24269721  T
Q  104 atcttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    || |||| || |||| ||||||||||||||| |   | |  ||||||||||||||| | ||| | ||||||||||||||| ||||    
T  24269720 attttttataccgtcaaacttacaaaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatactctact 24269636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 26394576 - 26394644
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaac 73  Q
    |||||||||||||||||||| | |||| |||||| |||||||||||| |||||||||||||||||||||    
T  26394576 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaac 26394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 13314869 - 13315052
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||||||||||| |||||| | |||| |||||| ||||| ||||||| |||| ||| |  |||||||||| ||||| |||| || || ||||| | |||    
T  13314869 gattcgaagaatcttaaccgttgcttacttttctgcaaccaaaaacaggtaaatttgttcagttgcaaacatataaaaattgcaa-ctctctaa-cgttt 13314966  T
Q  104 atctt---ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    |||||   || |||||||||||||  |||||||||  ||||  ||||||||||||||| ||||| | ||||||||||||||||||||    
T  13314967 atcttttattatatcgtcaactta-taaaataagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatact 13315052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 23893091 - 23893171
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| ||||||||||||  ||| ||| |||||| |||||||||||| |||| ||||||||||||||||||||||| ||||    
T  23893091 gattcaaagaatcctaactactagttacttttctgcaaccaaaacaggtaaatttgctttgttgcaaacagataaaaattg 23893171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 18448425 - 18448550
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaac-ctttctaaccctttatctt 108  Q
    ||||||| |||||| | |||| |||| | ||||||||| ||| ||| |||||| ||||||||||||||||| | || ||  |||||||||| ||||||||    
T  18448425 aagaatcataaccgttgcttacttttatgcaaccaaaaacaggtaa-cttgctctgttgcaaacagataaaaactgcaagactttctaaccatttatctt 18448523  T
Q  109 ttttatcgtcaacttacaaaaataagt 135  Q
    || ||||||||||||| ||||||||||    
T  18448524 ttatatcgtcaacttataaaaataagt 18448550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 17101790 - 17102007
Alignment:
Q  13 gaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttttt 111  Q
    ||||||||||| || |||| |||| | ||| ||||| ||| |||||||||| ||||||||||||||||| |||| |||||            |||||||     
T  17101790 gaatcctaaccactgcttacttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaaattggaacct------------atctttta 17101877  T
Q  112 tatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgat 211  Q
    || |||||||||||||| ||||||  | | | ||||||||| ||||| | ||| | | ||||||||     ||||| ||||||||| ||||||||||| |    
T  17101878 taccgtcaacttacaaatataagtaacacatattgtttggatgaaacgacaatccctatggatacg-----atactctacttatcactttattacttggt 17101972  T
Q  212 aaacaatttagtacacttaccatatccgaccatca 246  Q
    |||| ||||  ||||||| ||||||||||||||||    
T  17101973 aaacgatttgatacactttccatatccgaccatca 17102007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 16404122 - 16404042
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||| ||||||||||| || |||||| || |||| | ||| ||||||||||| ||||| ||||    
T  16404122 gattcgaagaatcctaaccgctgcttatttttctgcagccaaaataggtaaattcgctctgttgcaaacaaataaaaattg 16404042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 27659569 - 27659484
Alignment:
Q  102 ttatcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    ||||||||| ||||||||||||||||||||||||  | ||   |||||||||||||| | ||| ||||| ||||||||||| ||||    
T  27659569 ttatcttttatatcgtcaacttacaaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctact 27659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 18569276 - 18569201
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||| || |||| |||||||| |||| |||||| |||||||||||  |||||| ||| |||||||||||||||||    
T  18569276 gattcaaaaaatcgtaaccgctgcttacttttctgcaaccaaaacaagtaaactcgctatgttgcaaacagataaa 18569201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 25226357 - 25226138
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaac-ctttctaacccttt 103  Q
    ||||| || ||||||||  |||||||| |||| ||||||||| |||  |||||||||| | ||||||||| ||||| |||| ||  |||||||||||||     
T  25226357 gattcaaacaatcctaattgctacttacttttttacaaccaagacatgtaaacttgctctattgcaaacatataaaaattggaagactttctaaccctta 25226258  T
Q  104 atcttttttatcgtcaa-cttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttta 202  Q
      ||||| |||| |||| |||| ||||||| ||  |||   ||||||||| ||||| | ||| | |||  ||||||||||  |||     ||||| ||||    
T  25226257 --cttttatatcttcaaacttataaaaatatgtaacgcaaattgtttggaggaaacaataatccctgtatatacgatactcaact-----tatcacttta 25226165  T
Q  203 ttacttgataaacaatttagtacactt 229  Q
    ||||||||||||| |||||||||||||    
T  25226164 ttacttgataaacgatttagtacactt 25226138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 13697971 - 13697894
Alignment:
Q  107 ttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    |||| |||||||||||||   ||||||||  |||  |||||||||||||||| ||||| ||||||||||||||||| ||||    
T  13697971 ttttatatcgtcaactta---aaataagtaacgcaggttgtttggacgaaacgaaaatccttgtggatacgatactctact 13697894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 30806509 - 30806611
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    ||||||||| ||||| | ||| ||||||||   ||||| ||||| ||||||||| |||||||||| |||||| ||||  ||||||| ||  |||||||||    
T  30806509 ttgtttggatgaaacgacaatccttgtggactggatacgatactctacttatcactttattacttaataaacgatttgatacacttgcctaatccgacca 30806608  T
Q  244 tca 246  Q
    |||    
T  30806609 tca 30806611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 2637652 - 2637609
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaattt 220  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  2637652 gatacgatactctacttatcactttattacttgataaacaattt 2637609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 14528355 - 14528291
Alignment:
Q  20 aaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||| |||| |||||| |||||||| ||| ||| ||||||||||||||||||| |||| ||||    
T  14528355 aaccgctgcttacttttctgcaaccaaaccaggtaa-cttgctttgttgcaaacagctaaaaattg 14528291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 24245421 - 24245604
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-ttt 103  Q
    |||||||||||||||||||| | |||| |||||| |||| ||||||| |||||||||||||||| ||||| ||||| || | |||||||||||||| |||    
T  24245421 gattcgaagaatcctaaccgttgcttacttttctgcaactaaaacaggtaaacttgctttgttggaaacaaataaaaatcgaaacctttctaaccctttt 24245520  T
Q  104 atcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    ||||||| |||  |||||||||||||||||||  |||| |||||||||||||||| | ||| ||||||||||||||||| ||||    
T  24245521 atcttttatattctcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctact 24245604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 20744547 - 20744676
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||| || || |||||||| |||    
T  20744547 gattcgaagaatcctaaccgctgcttacttttctacaaccaaaacaggtaaacttgctatgttgcaaacagataaaaattgcaa-ctctctaaccc-tta 20744644  T
Q  105 tcttttttatcgtc-aacttacaaaaataagt 135  Q
     ||||| ||||||| |||||||||||||||||    
T  20744645 acttttatatcgtcaaacttacaaaaataagt 20744676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 6 - 247
Target Start/End: Complemental strand, 17432103 - 17431867
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttat 105  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||  |||||||||| ||||||||||||| ||| |||  || || | |||||| ||||    
T  17432103 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacagaaaaaaattacaa-ctctttaaccc-ttat 17432006  T
Q  106 cttttttatcgtc--aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
     |||| ||||| |  |||||| ||||||||||  || | |||||||||| ||||| | |||   ||||||||||     ||||| |||||  || |||||    
T  17432005 attttatatcgccaaaacttataaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacg-----atactctactttccactttat 17431911  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||| ||||| |||||||||||||  ||||||||||||||||    
T  17431910 tacttggtaaacgatttagtacacttgtcatatccgaccatcaa 17431867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 20315307 - 20315490
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||||||||| ||||| |||| |||| | || | |||||||||||  |||||||||||||||||||||||||||| |||| ||  ||  | | || |||    
T  20315307 gattcgaagaaccctaatcgcttcttactattttgcaaccaaaacatgtaaacttgctttgttgcaaacagataaaaattgcaagtttctttatccctta 20315406  T
Q  105 tcttttttatcgtcaactt-acaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
      |||| |||||||||||| | ||||||||||| ||||  ||||||||||||||  | ||| | ||||||||||||||| ||||    
T  20315407 aattttatatcgtcaacttaataaaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctact 20315490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 238
Target Start/End: Original strand, 19004146 - 19004332
Alignment:
Q  46 aaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttttttatcgtc-aacttacaaaaataagtttcgcgtgt 144  Q
    |||||| |||||||||  ||||||||||||||||| |||| || || | |||||| ||||||||| ||||||| |||||||||||||||||  || |  |    
T  19004146 aaacagataaacttgccctgttgcaaacagataaaaattgcaa-ctatttaaccc-ttatcttttatatcgtcaaacttacaaaaataagtaacgtgaat 19004243  T
Q  145 tgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatcc 238  Q
    ||||||||| |||  | ||| | ||||||||||     |||||  |||||||| ||||||||||| ||||| ||||||||||||| ||||||||    
T  19004244 tgtttggacaaaatgacaatccatgtggatacg-----atactccacttatcactttattacttggtaaacgatttagtacacttgccatatcc 19004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 28664983 - 28664903
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||| |||||| | ||||||||||| |||||||||||| |||| | ||| ||||||||||||||||| ||||    
T  28664983 gattcgaagaatcttaaccgttgcttatttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattg 28664903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 36175354 - 36175275
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| ||||||| |||||||| |||| ||||||||||||||||||| | |||||||||||||| ||||||||||| ||||    
T  36175354 gattcaaagaatcataaccgcttcttacttttctacaaccaaaacaggt-aacttgctttgttgaaaacagataaaaattg 36175275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 34128857 - 34128788
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaaca 74  Q
    |||||||||||||||||||| | |||| |||||| |||||||||||| |||||||||| | |||||||||    
T  34128857 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctattgcaaaca 34128788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 20858894 - 20858810
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaac 89  Q
    ||||||| |||||||||||||| |||| |||| | ||||||||| || |||| | |||||||||||||| |||||| ||||||||    
T  20858894 gattcgacgaatcctaaccgctgcttacttttatgcaaccaaaataggtaaattcgctttgttgcaaaccgataaaaattgtaac 20858810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 20563968 - 20564050
Alignment:
Q  4 tgattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||||||||| ||| |||| |||||| ||||| ||||||  |||| ||||| ||||||||||||||||| ||||    
T  20563968 tgattcgaagaatcctaactgcttcttacttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattg 20564050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 24140657 - 24140577
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||| ||||||||||||||| | |||| |||||| ||||||||| || |||||||||| ||| ||| ||||||||| ||||    
T  24140657 gatttgaagaatcctaaccgttgcttacttttctgcaaccaaaataggtaaacttgctctgtcgcacacagataaaaattg 24140577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 16523680 - 16523761
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaac-caaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||||||| |||| ||||||| |||  ||||||| |||| | ||| ||||||||||||||||| ||||    
T  16523680 gattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattg 16523761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 24852217 - 24852286
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||||||||||||||||||||||||| ||| | |||||||| |||| ||  |||| |||||||    
T  24852217 gatacgatactatacttatcattttattacttggtaatcgatttagtagacttgcctaatccaaccatca 24852286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 26121369 - 26121437
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||||||||| |||||| |||||||||||||| ||||| |||| |||||||| ||  ||||||||||||    
T  26121369 gatactatactctactta-cattttattacttgctaaacgatttggtacacttgcctaatccgaccatca 26121437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 39434677 - 39434620
Alignment:
Q  4 tgattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgc 61  Q
    ||||||||||||||||||||| | |||| |||||| ||| |||||||| |||||||||    
T  39434677 tgattcgaagaatcctaaccgttgcttacttttctgcaaacaaaacaggtaaacttgc 39434620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 15375933 - 15375997
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacacttaccat-atccgaccatca 246  Q
    ||||| ||||||||||||||||| ||| ||||| |||| |||||||| |||| ||||||||||||    
T  15375933 atactctacttatcattttattatttggtaaacgatttggtacacttgccataatccgaccatca 15375997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 17171610 - 17171669
Alignment:
Q  189 tacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaac 248  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||  ||||||| ||||||    
T  17171610 tacttatcactttattacttgataaaagatttggtacacttacctaatccgacaatcaac 17171669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 26835870 - 26835796
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||||| ||| | || |||||| |||| ||||||| |||| | ||| |||||||||||||||||    
T  26835870 gattcgaagaatcctaactgctgcatacttttctgcaac-aaaacaggtaaattcgctctgttgcaaacagataaa 26835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 18937790 - 18937732
Alignment:
Q  189 tacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||||||| |||||||||| |||||| |||| |||||||| ||  |||||||||||||    
T  18937790 tacttatcactttattacttaataaacgatttggtacacttgcctaatccgaccatcaa 18937732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 19283872 - 19283969
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    |||||||||||||||   ||||||||||||||| ||||| ||||     ||||| ||||||| ||| ||||| ||||||| ||||| ||  |||||||||    
T  19283872 ttgtttggacgaaacgttaattcttgtggatacaatactctact-----tatcactttattatttggtaaacgatttagtgcactttcctaatccgacca 19283966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 20744872 - 20744926
Alignment:
Q  193 tatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||| ||||||||||| ||||  |||| |||||||| |||||||||||||||||    
T  20744872 tatcactttattacttggtaaatgatttggtacacttgccatatccgaccatcaa 20744926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 15375772 - 15375853
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||| |||||| |||| | |||||||||  ||   |||||||| ||||||||||| ||||| ||||    
T  15375772 gattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattg 15375853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 24662212 - 24662265
Alignment:
Q  194 atcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||| ||||||||||||||||| |||| |||||||||||  ||||| |||||||    
T  24662212 atcactttattacttgataaacgatttggtacacttacctaatccgtccatcaa 24662265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 26110507 - 26110575
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||| |||||| |||||| |||||||||||||||||||| |||  |||||||| ||  ||||||||||||    
T  26110507 gatattatactctactta-cattttattacttgataaacgattcggtacacttgcctaatccgaccatca 26110575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 36175234 - 36175177
Alignment:
Q  125 caaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatact 182  Q
    |||||||||||  ||| ||||||||||||||||| | ||| ||| |||||||||||||    
T  36175234 caaaaataagtaacgcatgttgtttggacgaaacgacaatccttatggatacgatact 36175177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 17314990 - 17315074
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaac 89  Q
    ||||| ||||||| |||||||| |||| |||| | |||||||||||| |||  | ||| | ||||||| ||||||| ||||||||    
T  17314990 gattcaaagaatcttaaccgctgcttacttttttgcaaccaaaacaggtaacttcgctctattgcaaaaagataaaaattgtaac 17315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 23380314 - 23380354
Alignment:
Q  189 tacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||||||| ||||||||||| |||||||||| ||||||||    
T  23380314 tacttatcagtttattacttggtaaacaatttggtacactt 23380354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 24852050 - 24852121
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagat 77  Q
    ||||| ||||||||||||| || || ||  ||||||||||||||||| |||  ||||| ||||||||||||||    
T  24852050 gattcaaagaatcctaaccactgct-atcattctacaaccaaaacaggtaactttgctctgttgcaaacagat 24852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 4e-42; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 27908996 - 27909233
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-ttt 103  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||| ||||||||||||||||| |||| || | ||||||||| |||    
T  27908996 gattcgaagaatcctaaccgctgcttaattttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-cgttctaaccctttt 27909094  T
Q  104 atcttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttta 202  Q
    | ||||| ||||||| |||||||||||||||||  || |  ||||||||| ||||| | ||  | ||||||||||     ||||| ||||||||| ||||    
T  27909095 aacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacg-----atactctacttatcacttta 27909189  T
Q  203 ttacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||||| ||||| |||| |||||||| ||||||| ||||||||    
T  27909190 ttacttggtaaacgatttggtacacttgccatatctgaccatca 27909233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 28925743 - 28925506
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||||||||||||||||| || |||| |||||| |||||||||||| |||||||||| ||||||||||| ||||| |||| || |||||||||||||||    
T  28925743 gattcgaagaatcctaacctctgcttacttttctgcaaccaaaacaggtaaacttgctatgttgcaaacaaataaaaattgcaagctttctaacccttta 28925644  T
Q  105 tcttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
    |||||| ||||||| ||||||||||||||| |  |  |  ||||||||||||||| | ||| |  |||     ||||| |  || ||||||||| |||||    
T  28925643 tcttttatatcgtcaaacttacaaaaataaataacatgaattgtttggacgaaacgacaatccacgtg-----gatacaacgctctacttatcactttat 28925549  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||| | ||| ||||||||||||| |||||||||||||||||    
T  28925548 tacttggt-aacgatttagtacacttgccatatccgaccatcaa 28925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 17675507 - 17675637
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-ttta 104  Q
    ||||||| ||| |||||||||  |||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| ||||    
T  17675507 attcgaaaaattctaaccgctgtttatttttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaaccctttta 17675606  T
Q  105 tcttttttatcgtcaacttacaaaaataagt 135  Q
    ||||||  |||||||||||||||||||||||    
T  17675607 tcttttacatcgtcaacttacaaaaataagt 17675637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 17635653 - 17635783
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-ttta 104  Q
    ||||||| ||| ||||| |||  |||||| ||| |||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| ||||    
T  17635653 attcgaaaaattctaactgctgtttatttatctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaaccctttta 17635752  T
Q  105 tcttttttatcgtcaacttacaaaaataagt 135  Q
    ||||||  |||||||||||||||||||||||    
T  17635753 tcttttacatcgtcaacttacaaaaataagt 17635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 17743354 - 17743591
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||| || ||||||||||||  |||  |||||||||||||||| ||| ||||||||||| |||||||| ||||||| |||| ||| | ||||||||||     
T  17743354 gattcaaataatcctaaccgcggcttccttttctacaaccaaaaacaggtaaacttgcttagttgcaaaaagataaaaattgcaac-tctctaaccctta 17743452  T
Q  104 atcttttttatcgtcaa-cttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttta 202  Q
    | ||||| |||||| || ||| |||||||||||  | ||  ||||||||||||||| | ||| | ||||||||||||||| ||||     ||||| ||||    
T  17743453 a-cttttatatcgttaaacttgcaaaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctact-----tatcacttta 17743546  T
Q  203 ttacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||||| ||||| |||| |||||||| |||||||||||||||||    
T  17743547 ttacttggtaaacgatttggtacacttgccatatccgaccatcaa 17743591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 29143171 - 29143091
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||| ||||||||  ||| |||||||||||||||| || |||||||||| ||||||||||||||||| ||||    
T  29143171 gattcgaagaatcttaaccgctgtttacttttctacaaccaaaataggtaaacttgctctgttgcaaacagataaaaattg 29143091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 26603237 - 26603317
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| |||| ||||||||||||||||| ||||    
T  26603237 gattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaac-tgctctgttgcaaacagataaaaattg 26603317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 25618777 - 25618697
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||| | ||||||| |||| |||||| |||||||||||| ||||||| || ||||||||||||||||| ||||    
T  25618777 gattcgaagaattcgaaccgctgcttacttttctgcaaccaaaacaggtaaactttctctgttgcaaacagataaaaattg 25618697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 29719109 - 29719328
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaa-acagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctt- 102  Q
    |||||||||||||||||| ||| |||| |||||| |||||||| |||| |||||||||| ||||||| ||| ||||| |||| || || ||||||||||     
T  29719109 gattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaa-ctctctaaccctta 29719207  T
Q  103 tatctt-ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
    ||| || || || ||||||  |  ||||||||||  ||||  ||||||| ||||||| | ||| ||||||||||||     ||| | ||||||||| |||    
T  29719208 tattttattataccgtcaaact--aaaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacg-----ataatctacttatcacttt 29719300  T
Q  202 attacttgataaacaatttagtacactt 229  Q
    |||||||| ||||| |||| ||||||||    
T  29719301 attacttggtaaacgatttggtacactt 29719328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 30411889 - 30411802
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    |||||||| ||||||||||||| |||| |||||| ||||| ||||||  |||||||||| ||||||||||||||||| |||| |||||    
T  30411889 gattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaacct 30411802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 32085678 - 32085448
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttc-----taaccctttat 105  Q
    |||| ||||||||||| |||| |||||| |||||||| ||| ||| |||||| ||||||||||||||||| |||| || || |      |||| |||| |    
T  32085678 aagagtcctaaccgctgcttacttttctgcaaccaaaccaggtaa-cttgctctgttgcaaacagataaaaattgcaatctctaactcttaactcttt-t 32085581  T
Q  106 cttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttatta 205  Q
     |||| |||||||||||||   ||||||||  | || | ||||| |||||||| | ||| | |||||||| |||||| ||||     ||||| |||||||    
T  32085580 attttatatcgtcaactta---aaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctact-----tatcactttatta 32085489  T
Q  206 cttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||| |||||||||| |||||||||||  ||||||||||||    
T  32085488 cttggtaaacaatttggtacacttacctaatccgaccatca 32085448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 25196229 - 25196157
Alignment:
Q  8 tcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||| || |||| |||| | |||||||||||| |||||||||| ||||||||||| |||||    
T  25196229 tcgaagaatcctaaccactgcttacttttttgcaaccaaaacaggtaaacttgctatgttgcaaacatataaa 25196157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 25530657 - 25530577
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||| |||| | || | |||||||||||| |||| | ||| ||||||||||||||||| ||||    
T  25530657 gattcgaagaatcctaaccgctgcttactattttgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattg 25530577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 29883292 - 29883226
Alignment:
Q  162 aattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    |||||||||||||| ||||| ||| | |||||| |||||||||||||| |||||||||||||||||||    
T  29883292 aattcttgtggatatgatacaatattttactta-cattttattacttggtaaacaatttagtacactt 29883226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 31804791 - 31804908
Alignment:
Q  20 aaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatctttttt---atc 115  Q
    ||||||| |||| |||||| ||||||||| ||| |||| ||||||| ||||||||| ||||| |||| ||| | |||||||||| ||||||| |   |||    
T  31804791 aaccgctgcttacttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaac-tctctaaccctt-atcttttattatatc 31804888  T
Q  116 gtcaacttacaaaaataagt 135  Q
    ||||||||||||||||||||    
T  31804889 gtcaacttacaaaaataagt 31804908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 17349570 - 17349395
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    |||||||||||| || |||||| |||| |||| | ||||||||| ||  |||||||||| ||||||||||||||||| |||| |||| || |    ||||    
T  17349570 gattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaaattgcaacccttat----cttt 17349475  T
Q  104 atcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
       | || |||||||||||||| |||||||||  ||||   |||||||||||||| | |||  |||||||||||||||| ||||    
T  17349474 ---tattatatcgtcaacttac-aaaataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctact 17349395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 15339460 - 15339363
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctt 102  Q
    |||| ||||||||||||| ||| |||| |||||| |||| |||| ||| |||||||||| ||||||||||| ||||| |||| || || ||||||||||    
T  15339460 gatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaa-ctctctaaccctt 15339363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 25885477 - 25885517
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactat 184  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  25885477 ttgtttggacgaaacgacaattcttgtggatacgatactat 25885517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 25888265 - 25888317
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  25888265 gatacgatactgtacttatcactttattacttggtaaacaatttggtacactt 25888317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 26603396 - 26603447
Alignment:
Q  178 atactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    |||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||    
T  26603396 atacgatactctacttatcacttttttacttgataaacaatttggtacactt 26603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 23933423 - 23933502
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||||||| |||| |||| |  ||||||| ||  ||| |||||| ||||||||||||||||| ||||    
T  23933423 gattcaaagaatcctaaccgctgcttacttttgtgaaaccaaaccaagtaa-cttgctctgttgcaaacagataaaaattg 23933502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 25535483 - 25535403
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||| ||||||| |||| |||| | |||||||||||| |||| |  |  ||||||||| ||||||| ||||    
T  25535483 gattcgaagaatcccaaccgctgcttacttttttgcaaccaaaacaggtaaattcacgctgttgcaaatagataaaaattg 25535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 45553172 - 45553132
Alignment:
Q  189 tacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||||||| ||||||||||||||||| |||| ||||||||    
T  45553172 tacttatcactttattacttgataaacgatttggtacactt 45553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 45553349 - 45553271
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||||||| | ||   |||| |||||||||||| | |||||||| ||||||||||||||||| ||||    
T  45553349 gattcaaagaatcctaaccgctgc-taacgttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattg 45553271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 17438308 - 17438534
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||||||||||||||| | |||| |||||| |||||||||||| |||| ||||| ||||||||||||||||| |||| || |||||||| ||||||    
T  17438308 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaaattgctctgttgcaaacagataaaaattgcaagctttctaaaccttta 17438407  T
Q  105 tcttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
    | | || ||||||| |||||||||||||||||  || |  ||||||||||||||| | ||| | |||||||| |     ||||| |||||||||||||||    
T  17438408 tttattatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatg-----atactctacttatcattttat 17438502  T
Q  204 tacttgataaacaatttagtacacttaccatat 236  Q
     ||||| | ||| |||| |||||||| ||||||    
T  17438503 aacttggt-aacgatttggtacactttccatat 17438534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 19908529 - 19908292
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    |||||||||||||||||| ||| |||| |||||| |||||||||  || |||||||||||||||||||| | ||||| |||  || |||| ||||||||     
T  19908529 gattcgaagaatcctaactgctgcttacttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaattccaatcttt-taaccctta 19908431  T
Q  104 atcttttttatcgtcaactt--acaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
    | ||||| |||||||||  |  | ||||||| ||| || |  ||||||||||||||| |  |  ||||||||||||||||||||||     |||||||||    
T  19908430 a-cttttatatcgtcaaactgaaaaaaaataggttacgtgaattgtttggacgaaacgacgacccttgtggatacgatactatact-----tatcatttt 19908337  T
Q  202 attacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||| ||| ||||| |||| |||||||| | ||||||||||||||    
T  19908336 attatttggtaaacgatttggtacacttgcaatatccgaccatca 19908292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 4650447 - 4650328
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaa-cctttctaacccttt 103  Q
    |||||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||  |||||||||||||||| |||| ||  |||| |||||| ||    
T  4650447 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctccgttgcaaacagataaaaattgcaagtctttttaaccc-tt 4650349  T
Q  104 atcttttttatcgtcaactta 124  Q
    | ||||| |||||||||||||    
T  4650348 aacttttgtatcgtcaactta 4650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 932963 - 932833
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttat 105  Q
    ||||||||||| ||||||||| |||| |||||| |||||||||||  |||||||||| ||||||||||| ||||| |||||||   || ||| ||||||     
T  932963 attcgaagaatactaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacaaataaaaattgtaagtcttttaaacctttaa 932864  T
Q  106 cttttttatcgtc-aacttacaaaaataagt 135  Q
    ||||| || |||| |||||| ||||||||||    
T  932863 cttttataacgtcaaacttataaaaataagt 932833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 8770229 - 8770143
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    |||||||||||||||||| ||| |||| |||||| |||||||||||| |||||||||| ||||||||||| ||||| |||| |||||    
T  8770229 gattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaacct 8770143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 21302141 - 21301920
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaa-ccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||||||||||||||||||||  |||||||||| ||| | |||| || |||||||||| ||||||||||||||||| |||  || |  ||||||||  |    
T  21302141 gattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaattccaa-cactctaaccc-at 21302044  T
Q  104 atctt---ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattt 200  Q
    |||||   || ||||||||| ||||||||||||||  | ||  ||||||||||||||  | ||| | ||||||||||     ||||| ||||||||| ||    
T  21302043 atcttttattatatcgtcaatttacaaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacg-----atactctacttatcactt 21301949  T
Q  201 tattacttgataaacaatttagtacactt 229  Q
    ||||||||| ||||| |||| ||||||||    
T  21301948 tattacttggtaaacgatttggtacactt 21301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 8765327 - 8765241
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    ||||||||||||| |||| ||| |||| |||||| |||||||||||| |||||||||| ||||||||||| ||||| |||| |||||    
T  8765327 gattcgaagaatcttaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaacct 8765241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 20429764 - 20429693
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaac 248  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||| | ||  ||||||||||||||    
T  20429764 gatacgatactctacttatcattttattacttggtaaacaatttagtacacatgcctaatccgaccatcaac 20429693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 12754800 - 12754881
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||| |||| |||||| ||||||||| ||| |||||| ||| ||||||||||| ||||| ||||    
T  12754800 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaaattg 12754881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 21325422 - 21325342
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||||||||||||| | |||| |||||||||||||||||||||     ||||| ||||||||||| |||||||||| ||||||||    
T  21325422 ttgtttggacgaaacgacaatttttgtggatacgatactatact-----tatcagtttattacttggtaaacaatttggtacactt 21325342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 2167495 - 2167574
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||||||||| || |||| ||||| ||||||||||||| | |||||| | ||||||||||||||||| ||||    
T  2167495 gattcgaagaatcctaaccacttcttacttttccacaaccaaaacaggt-aacttggtatgttgcaaacagataaaaattg 2167574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 12411369 - 12411135
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||||||||||||||||||  ||||| | |||| |||||||| ||| |||||||| | |||||||||||  |||| |||| ||  ||||||| || |||    
T  12411369 gattcgaagaatcctaaccgtcacttactgttctgcaaccaaa-caggtaaacttgttgtgttgcaaaca--taaaaattgcaaa-tttctaaaccctta 12411274  T
Q  105 tcttttttatcgtcaa-cttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
     ||||| |||| |||| |||| ||||||||||  |     ||||||| ||||||| | ||| ||||||||||||||||| |||||     |||| |||||    
T  12411273 acttttatatcatcaaacttagaaaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatactctacta-----atcactttat 12411179  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||| |||   |||| |||||||| || ||||||||||||||    
T  12411178 tacttggtaagtgatttggtacacttgccttatccgaccatcaa 12411135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 20023430 - 20023510
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||| |||||||| |||||| |||||||||| | |||| | ||| ||||||||||||||||| ||||    
T  20023430 gattcaaagaatcctaactgctacttacttttctgcaaccaaaactggtaaattcgctctgttgcaaacagataaaaattg 20023510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 19925504 - 19925575
Alignment:
Q  10 gaagaatcctaaccgctacttatttttctacaa-ccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||||||||||||||| |||| |||||| ||| ||||||||| |||||||||| ||||||||||| |||||    
T  19925504 gaagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatataaa 19925575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 16229830 - 16229912
Alignment:
Q  4 tgattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||||||||||||| |||| |||| | ||||| ||||||| |||| | ||| ||||||||||||||||| ||||    
T  16229830 tgattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattg 16229912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 27413778 - 27413859
Alignment:
Q  9 cgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaac 89  Q
    |||||||||||||||||| |||| |||||| ||||| ||||||| |||| | ||| ||||| ||||||||||| ||||||||    
T  27413778 cgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaaatcgctctgttgaaaacagataaaaattgtaac 27413859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 8170093 - 8170017
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||||||||| | || |||||| ||||| ||||||| |||| | ||| |||||||||||||||||    
T  8170093 gattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaa 8170017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 18458469 - 18458521
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  18458469 gatacgatactctacttatcactttattacttgataaacaatttggtacactt 18458521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 21303232 - 21303311
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| || ||||||||||||| |||| |||||| |||||||||||  | |||||||| ||||||||||||||||| ||||    
T  21303232 gattcaaataatcctaaccgctgcttacttttctgcaaccaaaacaagt-aacttgctctgttgcaaacagataaaaattg 21303311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 18736556 - 18736624
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||| ||||||||||| |||||||||||| | |||||| |  |||||||||| |||||    
T  18736556 aagaatcctaaccgctgcttatttttctgcaaccaaaacaggt-aacttgttcggttgcaaacaaataaa 18736624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 41508588 - 41508516
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagata 78  Q
    ||||| ||||||| ||||||||  ||| |||||| |||||||||||  ||| ||||||||||||||||||||||    
T  41508588 gattcaaagaatcttaaccgctggttacttttctgcaaccaaaacatgtaa-cttgctttgttgcaaacagata 41508516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 12759441 - 12759389
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  12759441 gatacgatactctacttatcactttattacttggtaaacaatttggtacactt 12759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 12805768 - 12805847
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||||||||| || |||| |||||| |||||||| ||| | || || || ||||||||||||||||| ||||    
T  12805768 gattcgaagaatcctaacccctgcttacttttctgcaaccaaatcaggt-aattttctctgttgcaaacagataaaaattg 12805847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 21325558 - 21325483
Alignment:
Q  9 cgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||| ||||||||||||| |||||| ||||||||  || | |||||||| ||||||||| ||||||| ||||    
T  21325558 cgaagaatcataaccgctacttacttttctgcaaccaaattaggt-aacttgctctgttgcaaatagataaaaattg 21325483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 8883000 - 8883081
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||| ||  |||| |||||| |||| ||||  || |||||| ||| ||||||||||||||||| ||||    
T  8883000 gattcgaagaatcctaactgcagcttaattttctgcaactaaaaataggtaaactcgctatgttgcaaacagataaaaattg 8883081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 20429904 - 20429836
Alignment:
Q  33 ttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctt 102  Q
    |||||| ||||||||| || |||||||||| ||||||||||| ||||| |||| || | |||||||||||    
T  20429904 ttttctgcaaccaaaatagataaacttgctctgttgcaaacatataaaaattgcaaac-ttctaaccctt 20429836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 3116464 - 3116515
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    |||||||||||  |||||||| ||||||||||| |||||||||| ||||||||    
T  3116464 gatactatactc-acttatcactttattacttggtaaacaatttggtacactt 3116515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 70129 - 69952
Alignment:
Q  10 gaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatctt 108  Q
    ||||||||||||| ||| |||| |||||||||||||||| ||| |||||||||| | ||||||||| ||||| |||| ||||||||||| ||||||||||    
T  70129 gaagaatcctaactgctgcttacttttctacaaccaaaaacaggtaaacttgctctattgcaaacaaataaaaattgcaacctttctaa-cctttatctt 70031  T
Q  109 ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    || |||| ||||| |||||||||||||  || |  ||||||||||||||| | ||| |||||| |||||||||| ||||    
T  70030 ttatatcatcaacatacaaaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttact 69952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 13909076 - 13908839
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaac-ctttctaaccctt 102  Q
    ||||| |||||||||||||||| |||| |||| | ||||||||| ||| |||||||||| ||||||||||||||||| |||| ||  |||||||||| ||    
T  13909076 gattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaagactttctaacc-tt 13908978  T
Q  103 tatcttttttatcgtcaac-ttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
    || ||||| |||||||||  ||||||||||||||  | ||  ||||||||||||||| | ||| ||||||||||||||||| ||||     ||||| |||    
T  13908977 ta-cttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctact-----tatcacttt 13908884  T
Q  202 attacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||||||| ||||| |||| |||||||| | |||| |||||||||    
T  13908883 attacttggtaaacgatttggtacacttgctatattcgaccatca 13908839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 45 - 247
Target Start/End: Original strand, 16730318 - 16730514
Alignment:
Q  45 aaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttttttatcgtcaa-cttacaaaaataagtttcgcgtg 143  Q
    ||||||| |||||||||| ||||||||||||||||| |||| ||| |||||||||||| | ||||| ||| ||||| |||||||||||||||  |||| |    
T  16730318 aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac-tttctaacccttaa-cttttatattgtcaaacttacaaaaataagtaacgcgag 16730415  T
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    ||||||||||||||| ||||| ||| ||||||||||||| ||||     ||||| ||| || |||  ||| | ||||||||||| | |||||||||||||    
T  16730416 ttgtttggacgaaacgaaaatccttttggatacgatactctact-----tatcactttctttcttcgtaagcgatttagtacacatgccatatccgacca 16730510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 17217031 - 17216801
Alignment:
Q  15 atcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-tttatctt---tt 110  Q
    |||||||||| | |||| ||||||||||||||||||  |||||||||| ||||||||||||||||| |||| || ||||||||||| ||||||||   ||    
T  17217031 atcctaaccgttgcttacttttctacaaccaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa-ctttctaacccttttatcttgtatt 17216933  T
Q  111 ttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttga 210  Q
     |||| |||||||||||| ||||||  || |  ||||||||||||||| | ||| | |||||||| |     ||||| ||||||||| |||||| ||||     
T  17216932 atatcatcaacttacaaatataagtaacgagaattgtttggacgaaacgacaatccatgtggatatg-----atactctacttatcactttattgcttgg 17216838  T
Q  211 taaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||| |||| ||||| || ||||||| |||||||||    
T  17216837 taaacgatttggtacatttgccatatctgaccatcaa 17216801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 15164987 - 15164751
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||||||  |||||| | ||||| |||||| |||||||||||| |||||||||| ||||||||||| ||||| |||| || || |||||||| |||    
T  15164987 gattcgaagaaaactaacctccacttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacaaataaaaattgcaa-ctctctaaccc-tta 15164890  T
Q  105 tcttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
     ||||| ||||||| |||||||||||||||||  |||   ||||||||||||||  | ||| | ||||||||||     ||||| | ||||| | || ||    
T  15164889 acttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacg-----atactctgcttattaattgat 15164795  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||| ||||| |||| ||||||||  ||||||||||||||||    
T  15164794 tacttggtaaacgatttggtacacttgtcatatccgaccatcaa 15164751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 17709975 - 17709845
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaa-cctttctaacccttt 103  Q
    |||||||||||||||||| |||||||| |||| | |||||||||||| |||||||||| ||||||||||| ||||| |||  ||  |||| |||||| ||    
T  17709975 gattcgaagaatcctaacagctacttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaatttcaagtctttttaaccc-tt 17709877  T
Q  104 atcttttttatcgtcaacttacaaaaataagt 135  Q
    ||||||| ||||||||| ||| ||||||||||    
T  17709876 atcttttatatcgtcaaattataaaaataagt 17709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 19492589 - 19492815
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    |||||||||||||||||||||  |||| |||||| ||||||||| ||  |||||||||| ||||||||||| ||||| |||| |||||                
T  19492589 gattcgaagaatcctaaccgccgcttacttttctgcaaccaaaaacatgtaaacttgctgtgttgcaaacaaataaatattgcaacct------------ 19492676  T
Q  104 atcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttat 203  Q
    | ||||| ||| |||||| |||||||||||||  ||||  ||||||||| ||||| | ||||||||||||||||||||| ||||     ||||  |||||    
T  19492677 aacttttatattgtcaacctacaaaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctact-----tatccctttat 19492771  T
Q  204 tacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||| ||||| |||| ||||||||   |||||||||||||||    
T  19492772 tacttggtaaacgatttggtacacttgatatatccgaccatcaa 19492815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 7582519 - 7582282
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||| ||||||||||||| || ||||||||||| ||||||||| ||| |||||||| | | |||||||||||| || |||| ||   | |||| |||||    
T  7582519 gattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaa--tcctaagccttt 7582422  T
Q  104 -atcttttttatcgtcaa-cttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
     ||||||| ||||||||| ||||| |||||||||   ||   ||||||||||||||| | ||| | |||||||| |||||| ||||     ||||| |||    
T  7582421 tatcttttatatcgtcaaacttaccaaaataagtaatgcagattgtttggacgaaacaacaatccatgtggatatgatactctact-----tatcacttt 7582327  T
Q  202 attacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    |||||||| ||||  |||| |||||||| ||||||||||||||||    
T  7582326 attacttggtaaatgatttggtacactttccatatccgaccatca 7582282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 9737521 - 9737624
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    |||||| |||||||| | ||| | ||||||||||||||| |||| |||| |||| ||||||||||| ||||| |||| |||||||| ||  |||||||||    
T  9737521 ttgtttagacgaaactacaatccatgtggatacgatactctactttactgatcactttattacttggtaaacgatttggtacacttgcctaatccgacca 9737620  T
Q  244 tcaa 247  Q
    ||||    
T  9737621 tcaa 9737624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 25098043 - 25097962
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||| | || ||||| |||||| ||||||| |||| |||||||||||| |||||||||| ||||    
T  25098043 gattcgaagaatcctaaccgctgcatacttttcaacaaccaaaaacaggtaaatttgctttgttgccaacagataaaaattg 25097962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 11490586 - 11490518
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatc 245  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||| |||||||| ||  |||||||||||    
T  11490586 gatacgatactctacttatcactttattacttgataaacaatttggtacactttcctaatccgaccatc 11490518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 19562052 - 19562133
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||| |||||||||  ||| |||||| ||||| ||||||| |||||||||| ||||||||| ||||||| ||||    
T  19562052 gattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattg 19562133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 25094776 - 25094695
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||||||| |||  ||||||||| ||||||| || |||| | ||||||||||||||||||||| ||||    
T  25094776 gattctaagaatcctaaccgctgcttgattttctacatccaaaactaggtaaattcgctttgttgcaaacagataaaaattg 25094695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 25121104 - 25121176
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagata 78  Q
    |||||||||||||||||||||| |||| |||||| ||| |||||| | | |||||||| |||||||||||||||    
T  25121104 gattcgaagaatcctaaccgctgcttacttttctgcaatcaaaacgggt-aacttgctctgttgcaaacagata 25121176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 17026221 - 17026297
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||||||||| |||| || ||| ||||| ||||||| |||| || || |||||||||||||||||    
T  17026221 gattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaa 17026297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 24639338 - 24639414
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||| ||||||||||||| || |||| |||||| ||||| ||||||| |||||||||| ||||||||||| |||||    
T  24639338 gattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaacaaataaa 24639414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 19882722 - 19882624
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    ||||||||||||||| | ||| | ||| ||||||||||| |||||     |||| ||||||||||||||||| |||| |||||||| ||  |||||||||    
T  19882722 ttgtttggacgaaacgacaatccatgttgatacgatactctacta-----atcactttattacttgataaacgattttgtacacttgcctaatccgacca 19882628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 25121243 - 25121340
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||     || || ||||||||||| ||||| |||| | |||||| ||  |||||||||    
T  25121243 ttgtttggacgaaaccacaatccttgtggatacgatactatact-----ta-cactttattacttggtaaacgatttggaacactttcctaatccgacca 25121336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 13128753 - 13128971
Alignment:
Q  7 ttcgaagaatcctaaccgctacttatttttctacaacc--aaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||||| ||||| ||| |||| |||||| |||||  |||||||  |||||| || |||| |||||| ||||| |||| ||| | |||||||||| |    
T  13128753 ttcgaagaatgctaac-gctgcttacttttctgcaaccgaaaaacaggcaaacttactctgttccaaacaaataaaaattgcaac-tctctaaccctt-a 13128849  T
Q  105 tctttttt---atcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
    |||||| |   || ||||||| | ||||||||||  |||| |||||||||||||||| | ||| | | ||     ||||| ||||| |||||||||||||    
T  13128850 tcttttattatatggtcaactaa-aaaaataagtaacgcgagttgtttggacgaaacgacaatccctatg-----gatacaatactctacttatcatttt 13128943  T
Q  202 attacttgataaacaatttagtacactt 229  Q
    |||||||| ||||| |||| ||||||||    
T  13128944 attacttggtaaacgatttggtacactt 13128971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 11700614 - 11700666
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| || |||||||||||||||||| |||||||||| ||||||||    
T  11700614 gatacgatactctatttatcattttattacttggtaaacaatttggtacactt 11700666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 13992893 - 13992976
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttacc 232  Q
    |||||||||| |||| ||||| | ||||||||||||||| ||||     || || ||||||||||| |||||||||| |||||||||||    
T  13992893 ttgtttggacaaaacgaaaatccatgtggatacgatactctact-----taccactttattacttggtaaacaatttggtacacttacc 13992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 17672214 - 17671987
Alignment:
Q  14 aatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg-------taacctttctaaccctttatc 106  Q
    ||||||||| ||| |||| |||||| |||||||| ||| ||| |||||| ||||||||||||||||| ||||       |||||||  |||| |||| |     
T  17672214 aatcctaactgcttcttacttttctgcaaccaaaccaggtaa-cttgctctgttgcaaacagataaaaattgcaatctctaacctt--taactcttt-ta 17672119  T
Q  107 ttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattac 206  Q
    |||| |||||| |||||   |||||||||  |||| ||||||| |||||||| | ||| | ||||     ||||| ||||| ||||||||| ||||||||    
T  17672118 ttttatatcgttaactt---aaaataagtaacgcgagttgtttagacgaaacaacaatccatgtg-----gatacaatactctacttatcactttattac 17672027  T
Q  207 ttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||| ||||| |||| |||||||| ||  ||||| ||||||    
T  17672026 ttggtaaacgatttggtacacttgcctaatccggccatca 17671987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 22176007 - 22176059
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| ||||||||| ||||||||||||||||| |||| ||||||||    
T  22176007 gatacaatactctacttatcactttattacttgataaacgatttggtacactt 22176059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 19092335 - 19092280
Alignment:
Q  191 cttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||||| |||||||||||||||||||||| |||||||| ||  ||| ||||||||    
T  19092335 cttatcactttattacttgataaacaatttggtacacttgcctaatctgaccatca 19092280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 22357573 - 22357649
Alignment:
Q  168 tgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||||||||||| ||  || ||||||||| ||||||||||| ||||  ||||||||||||||||  ||| ||||||||    
T  22357573 tgtggatacgatagta--ctttacttatcactttattacttggtaaatgatttagtacacttacctaatctgaccatca 22357649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 5679304 - 5679207
Alignment:
Q  127 aaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtaca 226  Q
    |||||||||  ||||  ||||||||||||||| ||| ||| ||| ||||||||||| |||||     |||| ||||||||||| ||||| |||| |||||    
T  5679304 aaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctacta-----atcactttattacttggtaaacgatttggtaca 5679210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 40227992 - 40227914
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaac-caaaacagttaaacttgctttgttgcaaacagataaagattgtaa 88  Q
    |||||||||||||||| ||||||||||  ||||  |||| || ||||||| ||  |||||||||||||||| |||||||    
T  40227992 aagaatcctaaccgctgcttatttttcggcaacaaaaaataggtaaacttactccgttgcaaacagataaaaattgtaa 40227914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 12578179 - 12578240
Alignment:
Q  40 caaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||||||||||| ||| |||||| ||||||||||||||||| |||||||  | ||||||||||||    
T  12578179 caaccaaaacaggtaa-cttgctctgttgcaaacagataaaaattgtaa--tctctaacccttta 12578240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 14648949 - 14648880
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| |||| |||||||| ||  ||| ||||||||    
T  14648949 gatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaatctgaccatca 14648880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 17337012 - 17337093
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||| ||| | || |||| |||| | ||||||||| ||| |||||||||| ||||| ||||||||||| ||||    
T  17337012 gattcgaagaatcataatctctgcttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattg 17337093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 19374858 - 19374910
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactta 230  Q
    ||||| ||||| |||||| |||||||||||||||||||| |||| |||||||||    
T  19374858 gatacgatactctactta-cattttattacttgataaacgatttggtacactta 19374910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 26115783 - 26115862
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||| ||||||||||||||||| || |  ||| | |||||||||||| | ||||| || ||||||||||||||||| ||||    
T  26115783 gatttgaagaatcctaaccgctgctaacatttatgcaaccaaaacaggt-aacttactctgttgcaaacagataaaaattg 26115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 1848105 - 1848287
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||||||||||| |||||||| |||| |||||| |||||||||||| |||||||||| |||| |||||||||||| |||| || || |||||||||| |    
T  1848105 gattcgaagaatcataaccgctgcttacttttctgcaaccaaaacaggtaaacttgctctgtttcaaacagataaaaattgcaagctctctaacccttaa 1848204  T
Q  105 tcttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    | |||| ||||||| |||||||||||||||||  |||   ||||||||||||||  | ||| |  |||||||||||||| ||||    
T  1848205 t-ttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtact 1848287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 18368864 - 18369077
Alignment:
Q  13 gaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgta-acctttctaaccctttatctttt 110  Q
    |||||||||||| | |||| |||||||||||||||| ||| ||| |||||||||||||||||||||||| |||| |   |||||||||||||||||||||    
T  18368864 gaatcctaaccgtttcttacttttctacaaccaaaagcaggtaa-cttgctttgttgcaaacagataaaaattgcacgactttctaaccctttatctttt 18368962  T
Q  111 tta-tcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttg 209  Q
     || | ||||||||| ||||||||||  |  |  ||||||||||||||| | ||| | | ||     ||||| ||||| ||||||||| |||||||||||    
T  18368963 atatttgtcaacttataaaaataagtaactagaattgtttggacgaaacgacaatccctatg-----gatacaatactctacttatcactttattacttg 18369057  T
Q  210 ataaacaatttagtacactt 229  Q
     ||||| |||||||||||||    
T  18369058 gtaaactatttagtacactt 18369077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 8978889 - 8979120
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccc-tttatctt 108  Q
    |||||||||||| ||| ||||||||||| ||||| ||||||| |||||||| | | |||||||||||| || |||| ||   | ||||||| ||||||||    
T  8978889 aagaatcctaactgctgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaa--atcctaacccttttatctt 8978986  T
Q  109 ttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattact 207  Q
    || ||| ||| ||||||| |||||||||   |||  ||||||||||||||| | ||| | |||||||| |     ||||| ||||||||| |||||||||    
T  8978987 ttatattgtcaaacttaccaaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatg-----atactctacttatcactttattact 8979081  T
Q  208 tgataaacaatttagtacacttaccatatccgaccatca 246  Q
    || ||||  |||| |||||||| ||||||||||||||||    
T  8979082 tggtaaatgatttggtacactttccatatccgaccatca 8979120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 20582477 - 20582347
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg-taacctttctaacccttt 103  Q
    |||||||||||||||||| ||| |||| |||||| |||||||||||| |||||||||| ||||||||| ||||||| ||||  || |||| |||||| ||    
T  20582477 gattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagataaaaattgcaaatctttttaaccc-tt 20582379  T
Q  104 atcttttttatcgtcaacttacaaaaataagt 135  Q
    | ||||| ||||||||||||| |||| |||||    
T  20582378 accttttatatcgtcaacttataaaattaagt 20582347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 2564040 - 2563856
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctac-aaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||||||| ||||||||||||||||| |||||| | ||| ||| ||| |||||||||| ||||||||||||||||| ||| | | || |||||||| ||    
T  2564040 gattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatt-tcaactctctaaccc-tt 2563943  T
Q  104 atctt---ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    |||||   || |||||| |||||||| ||||||||  | |   ||||||||||||||| | ||| ||||||||||||||||| ||||    
T  2563942 atcttttattatatcgtgaacttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctact 2563856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 245
Target Start/End: Original strand, 13759808 - 13759973
Alignment:
Q  75 gataaagattgtaacctttctaaccctttatcttttttatcgtcaa-cttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtgga 173  Q
    |||||| |||| || |||||||| |||| | ||||| ||||||||| |||||||||||||||  ||||   |||||||||||||| | ||| ||||||||    
T  13759808 gataaaaattgcaagctttctaaaccttaa-cttttatatcgtcaaacttacaaaaataagtaacgcgaactgtttggacgaaacgacaatccttgtgga 13759906  T
Q  174 tacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatc 245  Q
    || |     ||||| ||||||||| ||||||| ||| ||||| |||| ||||||||||||||||||||||||    
T  13759907 tatg-----atactctacttatcactttattaattggtaaacgatttggtacacttaccatatccgaccatc 13759973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 3329542 - 3329758
Alignment:
Q  13 gaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttatcttt-t 110  Q
    |||||||||||||| |||| |||||| ||||||||| ||  |||||||||| ||||||||||||||||| |||| || || |||||||| ||||||||      
T  3329542 gaatcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaa-ctctctaaccc-ttatctttca 3329639  T
Q  111 ttat-cg-tcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattactt 208  Q
    |||| || | |||||||||||||||||  |||   ||||||||| ||||| | ||| | ||||||||||     ||||| ||||||||| ||||||||||    
T  3329640 ttatacgttaaacttacaaaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacg-----atactctacttatcactttattactt 3329734  T
Q  209 gataaacaatttagtacacttacc 232  Q
    | |||| |||||  ||||||||||    
T  3329735 ggtaaataatttgatacacttacc 3329758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 5108787 - 5108604
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||| |||||||||||||||| |||| |||||| ||||||||| ||  |||||||||| | ||||||||||||||| ||||||| || ||||||| | |    
T  5108787 gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaattgtaa-ctctctaaccatat 5108689  T
Q  104 a-tctt---ttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    | ||||   || ||||||||||||  |||||||||| |  ||  ||||||||||||||| | ||| ||||||||||||||||| ||||    
T  5108688 actcttttattatatcgtcaactt--aaaaataagtgt-tcgaattgtttggacgaaacgacaatccttgtggatacgatactctact 5108604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 8053940 - 8054069
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    ||||| |||||||||||| ||| |||| |||||| |||||||||||| |||||||||| | ||||||| |||||||  ||  ||   || |||| | |||    
T  8053940 gattcaaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctatattgcaaatagataaaatttacaagtcttttaactc-tta 8054038  T
Q  105 tcttttttatcgtcaacttacaaaaataagt 135  Q
    |||||| ||||||||||||||||||||||||    
T  8054039 tcttttatatcgtcaacttacaaaaataagt 8054069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 13418743 - 13418657
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    ||||| |||||||||||||||| |||| ||| || ||| |||||||| |||||||||| ||||||||||||||||| |||| |||||    
T  13418743 gattcaaagaatcctaaccgctgcttactttgctgcaatcaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct 13418657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 3734817 - 3734580
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttc-----taacc 99  Q
    ||||| |||| ||||||||  | |||| |||||| |||||||||||| ||| |||||| |||||||||||||||||  ||| || ||||      ||||     
T  3734817 gattcaaagagtcctaaccattgcttacttttctgcaaccaaaacaggtaa-cttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 3734719  T
Q  100 ctttatcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatt 199  Q
    |||| | |||| |||||||||||||   ||||||||  || |  |||||||||| |||| | ||||| ||||||||||||||| ||||     ||||| |    
T  3734718 cttt-tattttatatcgtcaactta---aaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctact-----tatcact 3734628  T
Q  200 ttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||||||| |||| ||||| |||||||||||  ||| |||||||||    
T  3734627 ttattacttggtaaaaaatttggtacacttacctaatctgaccatcaa 3734580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 7397362 - 7397283
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||||||||||| |||| |||||| ||||| ||||||| | |||||| ||||||||||||||||||| ||||    
T  7397362 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacagat-aacttgttttgttgcaaacagataaaaattg 7397283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 39273053 - 39273183
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||||||| |||||||||||| |||| |||||| ||||| |||| || |||||||||| ||||||||| |||| ||  ||| || |||| |||||| ||    
T  39273053 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaatttgcaa-ctttataaccc-tt 39273150  T
Q  104 atcttttttatcgtc-aacttacaaaaataagt 135  Q
    | ||||| ||||||| |||||||||||||||||    
T  39273151 aacttttatatcgtcaaacttacaaaaataagt 39273183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 8054464 - 8054586
Alignment:
Q  102 ttatcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcatttt 201  Q
    ||||||||| ||||||||||||||||||||||||  |  |  ||||||||||||||| | ||||| |||| |||||     ||||| ||||||||| |||    
T  8054464 ttatcttttatatcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacg-----atactctacttatcacttt 8054558  T
Q  202 attacttgataaacaatttagtacactt 229  Q
    |||| ||| ||||| |||| ||||||||    
T  8054559 attatttggtaaacgatttggtacactt 8054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 8877643 - 8877512
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatt-tttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttt 103  Q
    ||||| |||||||||||||||| |||| | ||| | ||||||||| || |||||||||| ||||||||||||||||| |||| ||  ||| | | || ||    
T  8877643 gattcaaagaatcctaaccgctgcttactatttttgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaagtttttttaaccctt 8877544  T
Q  104 atcttttttatcgtcaacttacaaaaataagt 135  Q
    | ||||| ||  ||||||||| ||||||||||    
T  8877543 aacttttatactgtcaacttataaaaataagt 8877512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 17829790 - 17829716
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||||||||||| ||||| || |||| |||||| |||||||||||||| |||||| | |||||||||||||||||    
T  17829790 gattcgaagaatcttaaccactgcttaattttctccaaccaaaacagtt-aacttgttctgttgcaaacagataaa 17829716  T

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Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 13277713 - 13277627
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacct 91  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||| | || | ||| | | ||||||||||||| |||| |||||    
T  13277713 gattcaaagaatcctaatcgctacttacttttctacaaccaaaacaggtcaattcgctctatagcaaacagataaaaattgcaacct 13277627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 11803290 - 11803221
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaaca 74  Q
    |||||||| |||||||||||||  ||| || ||| |||||||||||| |||||||||| |||||||||||    
T  11803290 gattcgaataatcctaaccgctggttacttctctgcaaccaaaacaggtaaacttgctctgttgcaaaca 11803221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 18662661 - 18662582
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||| ||||||||||| ||||  ||||| |||||||||||| | |||||||| ||||||||||| ||||| ||||    
T  18662661 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctctgttgcaaacaaataaaaattg 18662582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 246
Target Start/End: Complemental strand, 5530103 - 5530006
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgacca 243  Q
    ||||||||||||||| |||||   ||||||||||     || || ||||||||||||||||||||| |||||||||| |||||| | ||  |||||||||    
T  5530103 ttgtttggacgaaacgaaaatctctgtggatacg-----atgctttacttatcattttattacttggtaaacaatttggtacacctgcctaatccgacca 5530009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 6006157 - 6006085
Alignment:
Q  7 ttcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||| |||| ||||||||||||| |||||| | |||||||||| | ||||| || |||||||||||||||||    
T  6006157 ttcgaacaatcttaaccgctacttacttttctgccaccaaaacaggt-aacttactctgttgcaaacagataaa 6006085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 6042672 - 6042592
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||||||| ||||||||||| ||||| |||| || ||||||| || ||||||||||| ||||| ||||    
T  6042672 gattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaactt-ctctgttgcaaacatataaaaattg 6042592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 9864377 - 9864438
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccat 244  Q
    ||||| ||||||||| ||||||||||| |||||||||| |||||||| ||  ||||||||||    
T  9864377 atactctacttatcactttattacttggtaaacaatttggtacacttgcctaatccgaccat 9864438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 16058910 - 16058991
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||| ||| |||| ||| || ||||| ||||||  |||| ||||| ||||||||||||||||| ||||    
T  16058910 gattcgaagaatcctaacagctgcttactttactgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattg 16058991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 17077325 - 17077252
Alignment:
Q  17 cctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacc 90  Q
    |||||||||| |||| |||||| ||| |||||||| ||||||| || | ||||||||||||||| |||| ||||    
T  17077325 cctaaccgctgcttacttttctgcaaacaaaacaggtaaacttactctattgcaaacagataaaaattgcaacc 17077252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 4786062 - 4785987
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||||||||| |||| |||||| ||||| ||||||| | |||||||| | ||||||| |||||||    
T  4786062 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctctattgcaaatagataaa 4785987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 17153031 - 17153106
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||| |||| || |||||||| |||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||    
T  17153031 gattcaaagagtcataaccgctgcttacttttctgcaaccaaaaacaggtaa-cttgctttgttgcaaacagataaa 17153106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 140337 - 140263
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||| ||||||||| ||||||||| |  ||||| |||| ||||||| ||| |||||| |||||||||||||||||    
T  140337 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaa 140263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 18495420 - 18495357
Alignment:
Q  184 tactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||| ||||||||| ||||||||||  |||||||||||||||||||  |  |||||||||||||    
T  18495420 tactttacttatcactttattacttagtaaacaatttagtacacttgactaatccgaccatcaa 18495357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 31493145 - 31493068
Alignment:
Q  7 ttcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||| | ||||  |||||||||||||||||  | ||||  || ||||||||||||||||| ||||    
T  31493145 ttcgaagaatcctaaccgttgcttacatttctacaaccaaaacaagt-aactgactctgttgcaaacagataaaaattg 31493068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 7318327 - 7318258
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| || | |||||||| ||  ||||||||||||    
T  7318327 gatacgatactctacttatcactttattacttggtaaacgatatggtacacttgcctaatccgaccatca 7318258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 9131132 - 9131052
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||  |||| |||| | ||||| ||||||||| |||||||| | ||||||||| ||||| ||||    
T  9131132 gattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaacagtt-aacttgctctattgcaaacaaataaaaattg 9131052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 9574461 - 9574392
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| ||||||||| |||||| |||| ||||| ||||||||||||| ||  ||| ||||||||    
T  9574461 gatacgatactctacttatcactttattccttggtaaacgatttagtacacttgcctaatctgaccatca 9574392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 2453767 - 2453735
Alignment:
Q  197 attttattacttgataaacaatttagtacactt 229  Q
    ||||||||||||||||||||||||| |||||||    
T  2453767 attttattacttgataaacaatttaatacactt 2453735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 7492280 - 7492358
Alignment:
Q  144 ttgtttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacact 228  Q
    ||||||| ||||||| | ||| ||||||||||||||||| ||||     ||||||||||||||| ||| |||||||| |||||||    
T  7492280 ttgtttgaacgaaacaacaatccttgtggatacgatactctact-----tatcattttattactggat-aacaatttggtacact 7492358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 9130986 - 9130908
Alignment:
Q  147 tttggacgaaaccaaaattcttgtggatacgatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    |||||||||||| | ||| | ||||||||   ||| |||||||||||| || ||||||||||||||||||||||  |||||||    
T  9130986 tttggacgaaacgataatccatgtggata---tacaatactatactta-cactttattacttgataaacaatttgatacactt 9130908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 10584531 - 10584583
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| | ||||||| ||||||||||||||||| |||| ||||||||    
T  10584531 gatacgatactttgcttatcactttattacttgataaacgatttggtacactt 10584583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 10587069 - 10587121
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| |||| ||||||||    
T  10587069 gatacgatactctacttatcactttattacttggtaaacgatttggtacactt 10587121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 10937656 - 10937604
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||||||||||||| ||||||||||| ||||| ||||  |||||||    
T  10937656 gatacgatactatacttatcactttattacttggtaaacgatttgatacactt 10937604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 11803187 - 11803119
Alignment:
Q  119 aacttacaaaaataagtttcgcgtgttgtttggacgaaaccaaaattcttgtggatacgatactatact 187  Q
    |||||||||||||||||  ||||  ||||||||||||||  | ||| | ||||||||||||||| ||||    
T  11803187 aacttacaaaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctact 11803119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 701 - 854
Alignment:
Q  7 ttcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaacctttctaaccctttat 105  Q
    ||||||||||| |||||||| |||| |||||| ||||||||| ||| ||||||| || ||||||||||||||||| |||| || |||||||| || ||||    
T  701 ttcgaagaatcttaaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaatctttctaaacccttat 800  T
Q  106 cttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaac 158  Q
    ||||| ||||||| |||||| ||||||||||  || |  |||||||||||||||    
T  801 cttttatatcgtcaaacttataaaaataagtaacgtggattgtttggacgaaac 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 652 - 572
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||| |||| | ||| ||||||||||||||||| ||||    
T  652 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattg 572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 266 - 386
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattgtaac-ctttctaaccctt 102  Q
    |||||||||||||||||| ||| ||||| |||||| |||||||| ||| | | |||||| | |||||| |||||||| |||| ||  |||||||||||||    
T  266 gattcgaagaatcctaacggctgcttatatttctaaaaccaaaaacaggtta-cttgctctattgcaagcagataaaaattgcaagactttctaaccctt 364  T
Q  103 tatcttttttatcgtcaactta 124  Q
    |||||||| |||||||||||||    
T  365 tatcttttatatcgtcaactta 386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 21486 - 21406
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||||| ||||||| || ||||||||||| ||||| ||||    
T  21486 gattcgaagaatcctaatcgctacttacttttctgaaaccaaaacaggtaaacttcctctgttgcaaacaaataaaaattg 21406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 25196 - 25116
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||| ||||||||||||||| | |||| |||||| |||||||||||| |||||||||| ||||||||| ||| ||| ||||    
T  25196 gatttgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagagaaaaattg 25116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 15868 - 15740
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattgtaa-cctttctaaccctt 102  Q
    |||||||||||| ||||||||| |||| |||||  ||||| ||||||| | |||||||| |||||||||  |||||| |||| ||  |||||||||| ||    
T  15868 gattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggt-aacttgctctgttgcaaattgataaaaattgcaagactttctaaccgtt 15770  T
Q  103 tatcttttttatcgtcaacttacaaaaata 132  Q
    |||||||| |||| |||||||| |||||||    
T  15769 tatcttttatatcatcaacttataaaaata 15740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 39806 - 39727
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||| || |||||||| |||| |||||| |||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  39806 gattcaaagagtcataaccgctgcttacttttctgcaaccaaaacaggtaa-cttgctctgttgcaaacagataaaaattg 39727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 1788 - 1718
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||| ||||| ||||||||| ||| ||||||| |||||| ||| |||||||||||  |||||||||||||    
T  1788 gatacgatactctacttatcacttttttacttggtaaacagtttggtacacttacctaatccgaccatcaa 1718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 11288 - 11242
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  11288 atactctacttatcactttattatttgataaacaatttagtacactt 11242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 54914 - 54844
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| |||| |||||||| ||  |||||||||||||    
T  54914 gatacaatactctacttatcactttattacttggtaaacgatttggtacactttcctaatccgaccatcaa 54844  T

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Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 48235 - 48304
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| ||||  |||| || ||||||||||||||||    
T  48235 gatacgatactctacttatcactttattacttggtaaacgatttgatacatttgccatatccgaccatca 48304  T

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Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 5982 - 6063
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||||||||||||| |||| |||||| |||||||||||| ||||||  |||| | ||| | ||||||||||||||| ||||    
T  5982 gattcgaagaatcctgaccgttacttacttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattg 6063  T

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Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 35759 - 35652
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagataaagattgtaacctttctaacccttta 104  Q
    |||| |||||||| |||||||| ||||  ||||| |||||||||||| | |||||||||||||||| ||| ||||| |||| ||  | ||||||||||||    
T  35759 gatttgaagaatcttaaccgctgcttacctttctgcaaccaaaacaggt-aacttgctttgttgcagacaaataaaaattgcaa-atctctaacccttta 35662  T
Q  105 tcttttttat 114  Q
     || ||||||    
T  35661 actcttttat 35652  T

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Target: scaffold0090 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 7458 - 7506
Alignment:
Q  178 atactatactatacttatcattttattacttgataaacaatttagtaca 226  Q
    |||| ||||| ||||||||| ||||||||||||||||| ||||||||||    
T  7458 atacaatactctacttatcactttattacttgataaacgatttagtaca 7506  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 72125 - 72065
Alignment:
Q  178 atactatactatacttatcattttattacttgataaacaatttagtacacttaccatatcc 238  Q
    |||| ||||| ||||||||| ||||||||||| | |||||||| |||||||||||| ||||    
T  72125 ataccatactctacttatcactttattacttggttaacaatttggtacacttaccaaatcc 72065  T

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Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 72232 - 72139
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaac-agttaaacttgctttgttgcaaacagataaagattgtaacctttctaa 97  Q
    ||||||||||||||| ||  || |||| |||||| |||| ||||  |  |||||||||| ||||||||||||||||| |||| || ||||||||    
T  72232 gattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagataaaaattgcaagctttctaa 72139  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 76626 - 76550
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaacc-aaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    ||||||||||||||||| || | |||| |||||||||||| ||||||| |||| ||||| ||||| ||||| |||||    
T  76626 gattcgaagaatcctaatcggtgcttacttttctacaaccaaaaacaggtaaatttgctatgttgtaaacatataaa 76550  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 69301 - 69221
Alignment:
Q  6 attcgaagaatcctaaccgctacttatttttctacaaccaa-aacagttaaacttgctttgttgcaaacagataaagattg 85  Q
    |||| |||||||||||||||| ||||||||||| ||   || ||||| ||||||| || ||||||||||||||||| ||||    
T  69301 attctaagaatcctaaccgctgcttatttttctgcatgtaagaacaggtaaactttctctgttgcaaacagataaaaattg 69221  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 89737 - 89803
Alignment:
Q  11 aagaatcctaaccgctacttatttttctacaaccaaaacagttaaacttgctttgttgcaaacagata 78  Q
    |||| ||||||||||| ||||||||||| |||||||||||| | |||||| |  ||||||||||||||    
T  89737 aagagtcctaaccgctgcttatttttctgcaaccaaaacaggt-aacttgttcggttgcaaacagata 89803  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 19152 - 19095
Alignment:
Q  189 tacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatcaa 247  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||  ||||| |||||||    
T  19152 tacttatcattttattacttga-aaacaatttggtacacttgcctaatccggccatcaa 19095  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 18796 - 18842
Alignment:
Q  183 atactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||||| |||||||||||||||||| ||||| ||||||||    
T  18796 atactctacttatgattttattacttgataaataatttggtacactt 18842  T

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Target: scaffold0155 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 35871 - 35951
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttctacaaccaaaa-cagttaaacttgctttgttgcaaacagataaagattg 85  Q
    ||||| |||||||||||||||| |||| |||||| ||||||||| ||| | ||||| ||||||| |||| ||||||| ||||    
T  35871 gattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggt-aactttctttgttccaaatagataaaaattg 35951  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 168343 - 168412
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacacttaccatatccgaccatca 246  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| |||| |||||||| ||  ||| ||||||||    
T  168343 gatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaatctgaccatca 168412  T

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Target: scaffold0622 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 782 - 730
Alignment:
Q  177 gatactatactatacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||| ||||| ||||||||| ||||||||||| ||||| |||| ||||||||    
T  782 gatacaatactctacttatcactttattacttggtaaacgatttggtacactt 730  T

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Target: scaffold0093 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 43287 - 43211
Alignment:
Q  5 gattcgaagaatcctaaccgctacttatttttcta-caaccaaaacagttaaacttgctttgttgcaaacagataaa 80  Q
    |||||||||||||||||| ||| | || ||||||| |||||||| ||| |||| | | | |||||||||||||||||    
T  43287 gattcgaagaatcctaactgctgcatacttttctaccaaccaaatcaggtaaattggttgtgttgcaaacagataaa 43211  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 12151 - 12111
Alignment:
Q  189 tacttatcattttattacttgataaacaatttagtacactt 229  Q
    ||||||||| ||||||||||| |||||||||| ||||||||    
T  12151 tacttatcagtttattacttggtaaacaatttggtacactt 12111  T

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