View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3267_low_42 (Length: 240)
Name: NF3267_low_42
Description: NF3267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3267_low_42 |
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Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 8208132 - 8207912
Alignment:
| Q |
2 |
ggggggcctaaaaagcaatcttctaatttttgtgggtccgtacatgtacctagcagattattggcttgctagattagctctttggaaacccaattttgtt |
101 |
Q |
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| T |
8208132 |
ggggggcctaaaaagcaatcttctaatttttgtgggtc-gtacatgtacctagcagattatgggcttgctagattagctctttggaaacccaattttgtt |
8208034 |
T |
|
| Q |
102 |
tggtttgataatttttattctgctatctgcacactctattctttaaatgtggattttgttggtggttaataacgaaccttctttttcctaatacaagtgg |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
8208033 |
tggtttgataatttttattctgctatctgcacactctattctttaaatgtgggttttgttggtggttaataacgaaccttctttttcctaatacaaatgg |
8207934 |
T |
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| Q |
202 |
tagtatagtctaagtgactagt |
223 |
Q |
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||| |||||||||||||||||| |
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| T |
8207933 |
tagcatagtctaagtgactagt |
8207912 |
T |
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