View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3270_low_21 (Length: 273)
Name: NF3270_low_21
Description: NF3270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3270_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 31768588 - 31768826
Alignment:
| Q |
20 |
catccacaatgcatactaaaaatgtatattattgaattaaatcaaagttcctgatttcagttgttgggaaaataacacagaaaattaagaaacatgatcg |
119 |
Q |
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| T |
31768588 |
catccacaatgcatactaaaaatgtatattattggattaaatcaaagttcctgatttcagttgttgggaaaataacacagaaaattaagaaacatgatcg |
31768687 |
T |
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| Q |
120 |
cagcataataatataatgtgaaaaactccaaaaccagataaaacacatggttgttgtcgaatgatagcttacaaatagcattattgacttctgtcaaacc |
219 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31768688 |
caacataataatataatgtgaaaaactccaaaaccagataaaacacatggttgttgtcgaatgatagcttacaaatagcattattgacttctgtcaaacc |
31768787 |
T |
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| Q |
220 |
ccctaatccattatactcaattataagtggtcactactg |
258 |
Q |
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| T |
31768788 |
ccctaatccattatactcaattataagtggtcactactg |
31768826 |
T |
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