View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3270_low_45 (Length: 234)
Name: NF3270_low_45
Description: NF3270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3270_low_45 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 46686607 - 46686807
Alignment:
| Q |
15 |
caaaggcaagaacaaaacgggtaatttaggaatttcagttgagaatccaacatcaaatttctttcgttacaaactcatagccatcattaaaacaccacca |
114 |
Q |
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| T |
46686607 |
caaaggcaagaacaaaacgggtaatttaggaatttcagttgagaatccaacatcaaatttctttcgttacaaactcatagccatcattaaaacaccacca |
46686706 |
T |
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| Q |
115 |
acttcttggttgtttcccatacaaggaaaacaaagtcaaactttataggatcactaaaaacacgtgtaaactttttggatgttcctttgaagagtaaaaa |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46686707 |
acttcttggttgtttcccatacaaggaaaacaaagtcaaactttataggatcactaaaaacacgtgtaaactttttggatgttcctttgaagagtaaaaa |
46686806 |
T |
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| Q |
215 |
a |
215 |
Q |
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| T |
46686807 |
a |
46686807 |
T |
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