View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3271_high_36 (Length: 232)
Name: NF3271_high_36
Description: NF3271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3271_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 52763514 - 52763360
Alignment:
| Q |
72 |
taaagaaaacatctccgccgccaaaatccaacgattttcagccaactcaaacaactgcttaaacctatctctaagaggaatactaactaataaaggattt |
171 |
Q |
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| T |
52763514 |
taaataaaacatctccgccgctaaaatccaacgattttcagccaattcaaacaactgcttaaacctatctctaagaggaatactacctaataaaggattt |
52763415 |
T |
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| Q |
172 |
gttcatacaaatgttttgagtccattaccaactacccttttttaattttcttcga |
226 |
Q |
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||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
52763414 |
gttcatacagatgatttgagtccattaccaactacccttttttaattttcttcga |
52763360 |
T |
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