View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3272-Insertion-1 (Length: 720)

Name: NF3272-Insertion-1
Description: NF3272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3272-Insertion-1
NF3272-Insertion-1
[»] chr5 (46 HSPs)
chr5 (241-720)||(620807-621288)
chr5 (242-720)||(35406516-35406996)
chr5 (242-713)||(23951968-23952441)
chr5 (538-673)||(2372184-2372320)
chr5 (242-423)||(2372454-2372635)
chr5 (168-224)||(27839109-27839165)
chr5 (170-234)||(40182470-40182536)
chr5 (171-234)||(7208254-7208319)
chr5 (169-234)||(4818164-4818231)
chr5 (169-234)||(7523177-7523244)
chr5 (169-234)||(21739185-21739252)
chr5 (169-234)||(31644451-31644518)
chr5 (169-234)||(32528720-32528787)
chr5 (169-234)||(39918512-39918579)
chr5 (168-234)||(3735361-3735429)
chr5 (169-234)||(553402-553469)
chr5 (169-234)||(700625-700692)
chr5 (169-234)||(2351685-2351752)
chr5 (169-234)||(11963346-11963413)
chr5 (169-234)||(22493443-22493510)
chr5 (169-234)||(31770615-31770682)
chr5 (169-234)||(35701282-35701349)
chr5 (169-223)||(22432346-22432400)
chr5 (171-234)||(34794894-34794959)
chr5 (169-221)||(24181663-24181715)
chr5 (169-234)||(31880100-31880167)
chr5 (169-234)||(41790486-41790553)
chr5 (169-233)||(29241383-29241449)
chr5 (179-234)||(5571668-5571725)
chr5 (169-223)||(28090557-28090611)
chr5 (169-223)||(40489342-40489396)
chr5 (169-234)||(6284322-6284390)
chr5 (180-234)||(8136853-8136909)
chr5 (180-234)||(8561006-8561062)
chr5 (180-238)||(18470448-18470508)
chr5 (180-234)||(24036246-24036302)
chr5 (180-234)||(39788209-39788265)
chr5 (49-109)||(24181775-24181835)
chr5 (169-234)||(32093005-32093072)
chr5 (180-223)||(5598496-5598539)
chr5 (50-109)||(29241264-29241323)
chr5 (169-223)||(23091341-23091395)
chr5 (169-223)||(41459594-41459648)
chr5 (180-234)||(4689722-4689778)
chr5 (180-234)||(7770303-7770359)
chr5 (182-223)||(11090905-11090946)
[»] chr2 (44 HSPs)
chr2 (242-720)||(34585926-34586428)
chr2 (169-234)||(7761591-7761658)
chr2 (169-237)||(16177898-16177968)
chr2 (169-233)||(30326350-30326416)
chr2 (242-297)||(34580177-34580232)
chr2 (169-234)||(9717229-9717296)
chr2 (169-234)||(16104279-16104346)
chr2 (169-234)||(19513707-19513774)
chr2 (166-234)||(5278852-5278922)
chr2 (166-234)||(32497917-32497987)
chr2 (169-223)||(44284634-44284688)
chr2 (180-234)||(7258913-7258969)
chr2 (169-234)||(9732948-9733015)
chr2 (169-234)||(33889248-33889315)
chr2 (169-234)||(34338815-34338882)
chr2 (169-234)||(35114790-35114857)
chr2 (169-234)||(37308660-37308727)
chr2 (169-234)||(40832487-40832554)
chr2 (169-234)||(42706364-42706431)
chr2 (171-234)||(2645104-2645169)
chr2 (171-234)||(4641523-4641588)
chr2 (169-223)||(10399901-10399955)
chr2 (169-223)||(39461319-39461373)
chr2 (172-234)||(3913478-3913542)
chr2 (168-234)||(12672492-12672560)
chr2 (169-234)||(17540719-17540787)
chr2 (180-234)||(26418939-26418995)
chr2 (169-234)||(12939318-12939385)
chr2 (169-234)||(30798507-30798574)
chr2 (169-234)||(37003886-37003953)
chr2 (169-233)||(2086077-2086143)
chr2 (169-223)||(6896173-6896227)
chr2 (168-218)||(18793297-18793347)
chr2 (48-109)||(33889127-33889188)
chr2 (174-223)||(38993102-38993151)
chr2 (180-234)||(41366128-41366184)
chr2 (169-234)||(11114877-11114944)
chr2 (169-234)||(18685841-18685908)
chr2 (169-234)||(33366615-33366682)
chr2 (183-222)||(26796247-26796286)
chr2 (174-234)||(28824575-28824637)
chr2 (169-223)||(41934586-41934640)
chr2 (169-223)||(42365582-42365636)
chr2 (188-234)||(40692321-40692369)
[»] chr3 (49 HSPs)
chr3 (241-544)||(11198047-11198350)
chr3 (166-223)||(53557820-53557877)
chr3 (169-234)||(1344719-1344786)
chr3 (169-234)||(21221372-21221439)
chr3 (166-234)||(29584878-29584948)
chr3 (169-234)||(3964294-3964361)
chr3 (169-234)||(20609660-20609727)
chr3 (169-234)||(24571287-24571354)
chr3 (169-234)||(28675796-28675863)
chr3 (169-233)||(3864688-3864754)
chr3 (174-234)||(50678809-50678871)
chr3 (169-223)||(4851481-4851535)
chr3 (171-234)||(25860433-25860498)
chr3 (169-223)||(33364803-33364857)
chr3 (169-223)||(47958457-47958511)
chr3 (169-234)||(12349183-12349250)
chr3 (169-234)||(19906768-19906835)
chr3 (169-234)||(29646072-29646139)
chr3 (169-234)||(34026673-34026740)
chr3 (169-234)||(39052850-39052917)
chr3 (169-234)||(40094509-40094576)
chr3 (169-234)||(42636415-42636482)
chr3 (174-234)||(21373941-21374003)
chr3 (171-238)||(25927335-25927404)
chr3 (169-223)||(26282412-26282466)
chr3 (169-223)||(31883047-31883101)
chr3 (169-223)||(38213360-38213414)
chr3 (169-223)||(44116945-44116999)
chr3 (169-223)||(51259805-51259859)
chr3 (173-234)||(3695304-3695367)
chr3 (180-223)||(14155485-14155528)
chr3 (180-218)||(32621886-32621924)
chr3 (169-223)||(54622821-54622875)
chr3 (169-234)||(2135076-2135143)
chr3 (169-234)||(3867661-3867728)
chr3 (170-218)||(39215499-39215547)
chr3 (53-109)||(44116829-44116885)
chr3 (171-223)||(50386481-50386533)
chr3 (169-234)||(51296587-51296654)
chr3 (180-223)||(8648582-8648625)
chr3 (50-109)||(20609787-20609846)
chr3 (50-109)||(34026554-34026613)
chr3 (54-109)||(42636542-42636597)
chr3 (168-223)||(45690926-45690981)
chr3 (173-223)||(5442301-5442351)
chr3 (169-223)||(41694926-41694980)
chr3 (169-206)||(10747224-10747261)
chr3 (174-223)||(22484768-22484817)
chr3 (180-234)||(49748923-49748979)
[»] chr4 (58 HSPs)
chr4 (242-398)||(21987806-21987962)
chr4 (169-223)||(12600894-12600948)
chr4 (169-223)||(37865761-37865815)
chr4 (169-234)||(9512351-9512418)
chr4 (169-234)||(20802542-20802609)
chr4 (169-234)||(23521888-23521955)
chr4 (169-234)||(33552853-33552920)
chr4 (169-234)||(43641107-43641174)
chr4 (169-238)||(46680517-46680588)
chr4 (169-234)||(50729553-50729620)
chr4 (169-234)||(56154629-56154696)
chr4 (166-234)||(55065344-55065414)
chr4 (169-223)||(4325799-4325853)
chr4 (169-223)||(36743712-36743766)
chr4 (171-234)||(38812530-38812595)
chr4 (169-223)||(44649188-44649242)
chr4 (169-234)||(2725144-2725210)
chr4 (169-234)||(20694379-20694446)
chr4 (169-234)||(21202747-21202814)
chr4 (169-234)||(21580034-21580101)
chr4 (173-234)||(24002351-24002414)
chr4 (169-234)||(29785548-29785615)
chr4 (169-234)||(32181271-32181338)
chr4 (169-234)||(38486268-38486335)
chr4 (169-234)||(41711855-41711922)
chr4 (180-223)||(2629975-2630018)
chr4 (169-223)||(47642515-47642569)
chr4 (169-223)||(50727937-50727991)
chr4 (169-223)||(50735951-50736005)
chr4 (169-223)||(52949728-52949782)
chr4 (168-234)||(9807163-9807231)
chr4 (169-221)||(20518048-20518100)
chr4 (173-234)||(24210331-24210394)
chr4 (169-234)||(28115260-28115327)
chr4 (169-234)||(33177043-33177110)
chr4 (169-234)||(34929923-34929990)
chr4 (169-234)||(55593893-55593960)
chr4 (169-223)||(1231319-1231373)
chr4 (169-223)||(29616178-29616232)
chr4 (169-223)||(40792425-40792479)
chr4 (53-119)||(47361537-47361603)
chr4 (180-234)||(3649655-3649711)
chr4 (174-223)||(7554981-7555030)
chr4 (50-119)||(29616059-29616128)
chr4 (169-218)||(50178522-50178571)
chr4 (170-218)||(14296606-14296654)
chr4 (170-218)||(14314854-14314902)
chr4 (169-234)||(36885940-36886007)
chr4 (169-234)||(44324353-44324420)
chr4 (169-234)||(52319331-52319398)
chr4 (169-217)||(54542998-54543046)
chr4 (174-234)||(16320532-16320594)
chr4 (170-234)||(22318395-22318461)
chr4 (169-204)||(47361452-47361487)
chr4 (180-218)||(23327937-23327975)
chr4 (48-106)||(33552983-33553041)
chr4 (181-223)||(45577716-45577758)
chr4 (180-238)||(11056061-11056121)
[»] chr8 (51 HSPs)
chr8 (169-234)||(6386581-6386648)
chr8 (166-223)||(7394860-7394917)
chr8 (169-234)||(4052485-4052552)
chr8 (169-234)||(8673088-8673155)
chr8 (169-234)||(29563259-29563326)
chr8 (169-234)||(31732069-31732136)
chr8 (169-234)||(32303618-32303685)
chr8 (169-234)||(45446460-45446527)
chr8 (166-234)||(31513616-31513686)
chr8 (169-233)||(34063133-34063199)
chr8 (170-234)||(37664316-37664382)
chr8 (167-234)||(21272687-21272756)
chr8 (179-223)||(11944890-11944934)
chr8 (169-234)||(14005077-14005144)
chr8 (169-234)||(29672356-29672423)
chr8 (169-234)||(32020034-32020101)
chr8 (171-218)||(13406986-13407033)
chr8 (168-223)||(17805695-17805750)
chr8 (169-223)||(10467069-10467123)
chr8 (179-221)||(11926878-11926920)
chr8 (169-223)||(25478248-25478302)
chr8 (169-223)||(27103964-27104018)
chr8 (168-234)||(45114059-45114127)
chr8 (169-234)||(12753358-12753425)
chr8 (169-234)||(30543055-30543122)
chr8 (169-234)||(34101513-34101580)
chr8 (169-234)||(37618425-37618492)
chr8 (169-234)||(41709782-41709849)
chr8 (50-109)||(4052368-4052427)
chr8 (174-234)||(15001476-15001538)
chr8 (169-223)||(7591493-7591547)
chr8 (174-233)||(35225672-35225733)
chr8 (169-219)||(36426297-36426347)
chr8 (169-223)||(41548623-41548677)
chr8 (169-234)||(3251689-3251756)
chr8 (169-234)||(5968897-5968964)
chr8 (49-109)||(14005204-14005264)
chr8 (180-223)||(10656732-10656775)
chr8 (180-223)||(15351751-15351794)
chr8 (169-233)||(29611089-29611155)
chr8 (48-119)||(37861765-37861836)
chr8 (171-206)||(37861866-37861901)
chr8 (174-234)||(39642893-39642955)
chr8 (169-223)||(3361789-3361843)
chr8 (169-223)||(5859518-5859572)
chr8 (168-218)||(22999261-22999311)
chr8 (52-97)||(955123-955168)
chr8 (169-218)||(6460266-6460315)
chr8 (180-238)||(27109570-27109630)
chr8 (180-234)||(30501161-30501217)
chr8 (52-109)||(30543182-30543239)
[»] chr6 (31 HSPs)
chr6 (169-234)||(11382069-11382136)
chr6 (169-234)||(2614901-2614968)
chr6 (169-234)||(10324168-10324235)
chr6 (173-234)||(11279137-11279200)
chr6 (169-234)||(24242669-24242736)
chr6 (168-234)||(17443266-17443334)
chr6 (168-234)||(18057523-18057591)
chr6 (169-234)||(166980-167047)
chr6 (169-234)||(3259688-3259755)
chr6 (169-234)||(3932864-3932931)
chr6 (169-234)||(11613848-11613915)
chr6 (169-234)||(24203367-24203434)
chr6 (170-234)||(15277337-15277403)
chr6 (169-223)||(10485162-10485216)
chr6 (169-223)||(10960005-10960059)
chr6 (169-223)||(17867840-17867894)
chr6 (169-223)||(17877623-17877677)
chr6 (169-223)||(32132450-32132504)
chr6 (169-223)||(34176835-34176889)
chr6 (180-238)||(8177934-8177994)
chr6 (169-234)||(4494172-4494239)
chr6 (169-234)||(11212262-11212329)
chr6 (169-234)||(32409909-32409976)
chr6 (168-223)||(3379714-3379769)
chr6 (180-223)||(9902728-9902771)
chr6 (169-223)||(7396195-7396249)
chr6 (179-234)||(14925513-14925570)
chr6 (168-234)||(34684040-34684109)
chr6 (169-238)||(3290677-3290746)
chr6 (187-233)||(29054379-29054427)
chr6 (169-234)||(15276994-15277061)
[»] chr1 (45 HSPs)
chr1 (169-234)||(13994168-13994235)
chr1 (170-238)||(41967938-41968008)
chr1 (169-223)||(28340409-28340463)
chr1 (169-234)||(844817-844884)
chr1 (169-234)||(16386868-16386935)
chr1 (169-234)||(32270367-32270434)
chr1 (169-234)||(41972925-41972992)
chr1 (169-234)||(42510539-42510606)
chr1 (169-234)||(45490968-45491035)
chr1 (170-234)||(1351528-1351594)
chr1 (166-234)||(16437373-16437443)
chr1 (169-223)||(16476261-16476315)
chr1 (169-223)||(50540358-50540412)
chr1 (168-238)||(16704739-16704811)
chr1 (169-234)||(1601187-1601254)
chr1 (169-234)||(6711139-6711206)
chr1 (169-234)||(16451141-16451208)
chr1 (179-223)||(26733579-26733623)
chr1 (169-221)||(30105788-30105840)
chr1 (169-234)||(31004146-31004213)
chr1 (170-238)||(7183933-7184003)
chr1 (169-233)||(17887962-17888028)
chr1 (169-223)||(12890252-12890306)
chr1 (169-223)||(17327755-17327809)
chr1 (169-223)||(26118321-26118375)
chr1 (167-234)||(51264507-51264576)
chr1 (48-109)||(30105900-30105961)
chr1 (166-223)||(46154911-46154968)
chr1 (169-234)||(32289437-32289504)
chr1 (173-234)||(35387404-35387467)
chr1 (50-109)||(26118435-26118494)
chr1 (180-223)||(26764901-26764944)
chr1 (168-223)||(50304664-50304719)
chr1 (169-223)||(38663146-38663200)
chr1 (169-223)||(42512876-42512930)
chr1 (179-234)||(44738135-44738192)
chr1 (180-234)||(6029394-6029450)
chr1 (169-206)||(20495014-20495051)
chr1 (180-234)||(39281919-39281975)
chr1 (171-223)||(7837149-7837201)
chr1 (179-223)||(24339745-24339789)
chr1 (169-234)||(50382496-50382563)
chr1 (170-223)||(2761662-2761715)
chr1 (174-223)||(38087102-38087151)
chr1 (169-202)||(49799391-49799424)
[»] chr7 (44 HSPs)
chr7 (168-234)||(21784879-21784947)
chr7 (169-234)||(11321904-11321971)
chr7 (169-234)||(18386534-18386601)
chr7 (169-234)||(26994244-26994311)
chr7 (169-234)||(32873788-32873855)
chr7 (169-234)||(44748704-44748771)
chr7 (169-234)||(46633706-46633773)
chr7 (169-234)||(47953199-47953266)
chr7 (170-234)||(36769588-36769654)
chr7 (169-223)||(10932589-10932643)
chr7 (169-223)||(40753164-40753218)
chr7 (169-223)||(47947769-47947823)
chr7 (169-234)||(3922722-3922789)
chr7 (173-234)||(41211219-41211282)
chr7 (169-238)||(43158701-43158772)
chr7 (169-223)||(26371841-26371895)
chr7 (169-223)||(26652875-26652929)
chr7 (169-223)||(34295436-34295490)
chr7 (174-233)||(41665595-41665656)
chr7 (169-234)||(329479-329546)
chr7 (169-234)||(1870144-1870211)
chr7 (169-221)||(7958635-7958687)
chr7 (169-221)||(18470693-18470745)
chr7 (169-234)||(29661332-29661399)
chr7 (169-234)||(30849265-30849332)
chr7 (169-234)||(43189261-43189328)
chr7 (169-234)||(47316717-47316784)
chr7 (169-223)||(30599040-30599094)
chr7 (169-223)||(43368210-43368264)
chr7 (48-109)||(16962985-16963046)
chr7 (174-223)||(21133386-21133435)
chr7 (179-233)||(34519527-34519583)
chr7 (171-223)||(3892058-3892110)
chr7 (179-223)||(8054408-8054452)
chr7 (169-234)||(34117461-34117528)
chr7 (174-234)||(43213944-43214006)
chr7 (50-97)||(46408771-46408818)
chr7 (169-223)||(48699407-48699461)
chr7 (174-223)||(1363650-1363699)
chr7 (180-234)||(9913545-9913601)
chr7 (180-234)||(9927233-9927289)
chr7 (179-233)||(26910430-26910486)
chr7 (48-109)||(40753043-40753104)
chr7 (48-97)||(46633570-46633619)
[»] scaffold0169 (2 HSPs)
scaffold0169 (169-234)||(12560-12627)
scaffold0169 (169-234)||(18078-18145)
[»] scaffold0027 (1 HSPs)
scaffold0027 (169-234)||(15177-15244)
[»] scaffold0014 (1 HSPs)
scaffold0014 (169-234)||(101954-102021)
[»] scaffold0360 (3 HSPs)
scaffold0360 (174-234)||(15405-15467)
scaffold0360 (169-223)||(13616-13670)
scaffold0360 (50-109)||(15528-15587)
[»] scaffold0181 (1 HSPs)
scaffold0181 (166-223)||(19127-19184)
[»] scaffold0208 (1 HSPs)
scaffold0208 (169-234)||(2362-2429)
[»] scaffold0957 (1 HSPs)
scaffold0957 (169-215)||(2540-2586)
[»] scaffold0098 (1 HSPs)
scaffold0098 (169-223)||(51444-51498)
[»] scaffold0004 (1 HSPs)
scaffold0004 (169-223)||(373001-373055)
[»] scaffold0054 (1 HSPs)
scaffold0054 (180-234)||(23591-23647)
[»] scaffold0650 (1 HSPs)
scaffold0650 (169-234)||(1667-1734)
[»] scaffold0077 (1 HSPs)
scaffold0077 (173-218)||(7503-7548)
[»] scaffold0280 (1 HSPs)
scaffold0280 (179-234)||(13711-13768)
[»] scaffold0155 (1 HSPs)
scaffold0155 (169-223)||(33581-33635)


Alignment Details
Target: chr5 (Bit Score: 409; Significance: 0; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 241 - 720
Target Start/End: Complemental strand, 621288 - 620807
Alignment:
Q  241 acactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatagaga 340  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  621288 acactactagaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataatgaacagaga 621189  T
Q  341 cggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaannnnnn 440  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  621188 cggaattatatttttaacatcagagacagactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaaatttct 621089  T
Q  441 nnnn--aattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaac 538  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  621088 ttttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaac 620989  T
Q  539 ccccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaactcaaaattagaatcacttcatcaccaatttcacaaaagcccta 638  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  620988 ccccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaactaaaaattagaatcacttcatcaccaatttcacaaaagcccta 620889  T
Q  639 aaatggcaatttcgaatcccttcatctccaattacacgccctgcaatagatctgcacatctaagttcaaatcccggttcgtg 720  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  620888 aaatggcaatttcgaatcccttcatctccaattacacgccctgcaatagatccgcacatctaagttcaaatcccggttcgtg 620807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 242 - 720
Target Start/End: Original strand, 35406516 - 35406996
Alignment:
Q  242 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatagagac 341  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  35406516 cactactagaaaagtttcatataccaacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataatgaacagagac 35406615  T
Q  342 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaannnnnnn 441  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||           
T  35406616 ggaattatatttttaacatcagagacggactttagagacggattgtaccgtcacaaaattattttgtctccaattccgtctcaaacaggtcaaatttctt 35406715  T
Q  442 nnn--aattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaacc 539  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35406716 tttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaagacc 35406815  T
Q  540 cccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaactcaaaattagaatcacttcatcaccaatttcacaaaagccctaa 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35406816 cccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaactaaaaattagaatcacttcatcaccaatttcacaaaagccctaa 35406915  T
Q  640 aatggcaatttcgaatcccttcatctccaattacacgccctgcaatagatctgcacatctaagttcaaatcccggttcgtg 720  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  35406916 aatggcaatttcgaatcccttcatctccaattacacgccctgcaatagatccgtacatctaagttcaaatcccggttcgtg 35406996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 242 - 713
Target Start/End: Complemental strand, 23952441 - 23951968
Alignment:
Q  242 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatagagac 341  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  23952441 cactactagaaaagttttatataccgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataaggaagagagac 23952342  T
Q  342 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaannnnnnn 441  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  23952341 ggaattttatttttaacatcagagacggactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaaatttctt 23952242  T
Q  442 nnn--aattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaacc 539  Q
         ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  23952241 tttttaattaattaaaaataactttttatccattcgttggagccatatctcattttcaaaggctccaaagtcgaattttacttggctccaacccaaaacc 23952142  T
Q  540 cccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaactcaaaattagaatcacttcatcaccaatttcacaaaagccctaa 639  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23952141 cccaattttttcatcccttaacttcaaatttctgcaaagccttacaataatcaaactcaaaattagagtcacttcatcaccaatttcacaaaagctctaa 23952042  T
Q  640 aatggcaatttcgaatcccttcatctccaattacacgccctgcaatagatctgcacatctaagttcaaatcccg 713  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  23952041 aatggcaattttgaatcccttcatctccaattacatgccctgcaatagatccgcacatctaagttcaaatcccg 23951968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 538 - 673
Target Start/End: Complemental strand, 2372320 - 2372184
Alignment:
Q  538 cccccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaa-ctcaaaattagaatcacttcatcaccaatttcacaaaagccc 636  Q
    |||| |||||||||||||||| | |||||||||| ||||| || |||||||| |||| | |||||| | ||||||| |||| || ||||||||||| |||    
T  2372320 ccccaaattttttcatccctccatttcaaatttcagcaaatccctaaaataaccaaaacacaaaatcaaaatcactccatctcccatttcacaaaatccc 2372221  T
Q  637 taaaatggcaatttcgaatcccttcatctccaattac 673  Q
    |||| ||| | |||||||||| ||||||||| |||||    
T  2372220 taaattggaattttcgaatcctttcatctccgattac 2372184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 242 - 423
Target Start/End: Complemental strand, 2372635 - 2372454
Alignment:
Q  242 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatagagac 341  Q
    |||||||| |||||| ||| ||||||||||||||| ||||| || ||||||||||||||  ||||||  ||| | ||||| |||  | |  ||||| |||    
T  2372635 cactactagaaaagtctcaaataccgacggaatttggagacggaatttattccgtctctcctagagaccgaaatggagacggaaatttacaaatagtgac 2372536  T
Q  342 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctc 423  Q
    | ||||  | ||||||||| |||||| || |||||||||||||| ||||  | |||| |||||||||||| | |||||||||    
T  2372535 gaaattaaacttttaacattagagacagactttagagacggattttacctacccaaagttattctgtctctatttccgtctc 2372454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 27839165 - 27839109
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgtt 224  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  27839165 aggacaaaaggctattttggtattttagacaacttgtacatgagacaaaaagttgtt 27839109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 40182470 - 40182536
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  40182470 gacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgatgtggtttggt 40182536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 7208319 - 7208254
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  7208319 acaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 7208254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 4818231 - 4818164
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  4818231 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 4818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 7523177 - 7523244
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  7523177 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 7523244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 21739252 - 21739185
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  21739252 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 21739185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 31644451 - 31644518
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  31644451 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 31644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 32528720 - 32528787
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  32528720 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 32528787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 39918512 - 39918579
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  39918512 ggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 39918579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 3735361 - 3735429
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  3735361 aggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 3735429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 553402 - 553469
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  553402 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 553469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 700692 - 700625
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||    
T  700692 ggacaaaataatattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtggtttggt 700625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 2351685 - 2351752
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2351685 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 2351752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 11963346 - 11963413
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| ||||||||||||||||||||||||| || || |||||||||||||  |||||||||||    
T  11963346 ggacaaaatgctattttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttggt 11963413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 22493510 - 22493443
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||  |||||||||||    
T  22493510 ggacaaaatgctattttgatattttagacaacttgtacgtgtgacaaaaagttgtgctgtggtttggt 22493443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 31770682 - 31770615
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||| ||||||||||||| || ||||||||||  ||||||||||||||    
T  31770682 ggacaaaatgctattttggtatttcagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 31770615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 35701282 - 35701349
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| ||  |||||||||  ||||||||||||||    
T  35701282 ggacaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttatgttgtggtttggt 35701349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 22432400 - 22432346
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  22432400 ggacgaaatgctattttggtattttagacaacttgtacttgagacaaaaaattgt 22432346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 34794894 - 34794959
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||| |||||||||||||||||||||||| ||| || |||||||||||||  |||||||||||    
T  34794894 acaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgatgtggtttggt 34794959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 24181715 - 24181663
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 221  Q
    ||||||||| |||||||||||||||||||||||| ||| || |||||||||||    
T  24181715 ggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagtt 24181663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 31880167 - 31880100
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| |  |||||| ||||||  |||||||||||    
T  31880167 ggacaaaatgctattttggtattttagacaacttgtacgtaggacaaatagttgtgatgtggtttggt 31880100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 41790553 - 41790486
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  |||||| ||||||||||||| |||||| |||||||||||||  ||||||||||||||    
T  41790553 ggacaaaatgttattttagtattttagacaatttgtacgtgagacaaaaagttgtgttgtggtttggt 41790486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 29241383 - 29241449
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 233  Q
    ||||||||| |||||||| |||||||| |||||||||| || |||||||||||||  ||||||||||    
T  29241383 ggacaaaatgctattttgatattttagccaacttgtacgtgggacaaaaagttgtgctgtggtttgg 29241449  T

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Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 5571725 - 5571668
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||||||||||||||||||||| |  ||||||||||  ||||||||||||||    
T  5571725 ctattttggtattttagacaacttgtacgttggacaaaaagttgtgttgtggtttggt 5571668  T

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Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 28090611 - 28090557
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  |||||| |||||||||||||||||||| || |||||||||||||    
T  28090611 ggacaaaatgttatttttgtattttagacaacttgtacgtgggacaaaaagttgt 28090557  T

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Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 40489342 - 40489396
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||||||  || |||||||||||||    
T  40489342 ggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgt 40489396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 6284390 - 6284322
Alignment:
Q  169 ggacaaaattctatttt-ggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| ||||||| |||||||| |||||||||||| || ||||||||||  ||||||||||||||    
T  6284390 ggacaaaatgctatttttggtattttggacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 6284322  T

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Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 8136853 - 8136909
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||||||||||||||||||||| |  ||||||||||  ||||||||||||||    
T  8136853 tattttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggt 8136909  T

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Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 8561062 - 8561006
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||||    
T  8561062 tattttggtattttagacaacttgtacctggaacaaaaagttgtgatgtggtttggt 8561006  T

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Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 18470508 - 18470448
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggtaagg 238  Q
    ||||||||| ||||||||||||||||| || || ||||||||||  |||||||||||||||    
T  18470508 tattttggtgttttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtaagg 18470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 24036246 - 24036302
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||||||||| || || ||||||||||  |||||||||||    
T  24036246 tattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggt 24036302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 39788209 - 39788265
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||| |||||||||||||||||||| || |||||||||||||  |||||||||||    
T  39788209 tattttagtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 39788265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 24181835 - 24181775
Alignment:
Q  49 agggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    ||||||||||||||||  ||||||| ||||| | || |||| |||||||||||||||||||    
T  24181835 agggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaa 24181775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 32093072 - 32093005
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| |||||||||||||||||| || |||||| || |||||||||||||  |||||||||||    
T  32093072 ggacgaaatgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggt 32093005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 5598496 - 5598539
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||    
T  5598496 tattttgatattttagacaagttgtacgtgagacaaaaagttgt 5598539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 29241264 - 29241323
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    ||||||| |||||||  ||||||||||||| | || |||| |||||||||||||||||||    
T  29241264 gggtgtgcttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaa 29241323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 23091395 - 23091341
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||| |||||||||||| || ||| ||||||||||||||||    
T  23091395 ggacaaaatgttattttgatattttagacaatttatacgtgagacaaaaagttgt 23091341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 41459594 - 41459648
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||| ||||||||||||||||||| ||  ||||||||||||    
T  41459594 ggacaaaatgttattttgatattttagacaacttgtacgtggaacaaaaagttgt 41459648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 4689778 - 4689722
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||| ||||||||| |||||||||| || ||||||||||  ||||||||||||||    
T  4689778 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgttgtggtttggt 4689722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 7770359 - 7770303
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||| ||||||||| |||||||||| || |||||||||||||  |||||||||||    
T  7770359 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggt 7770303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 11090946 - 11090905
Alignment:
Q  182 ttttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||    
T  11090946 ttttgatattttagacaacgtgtacgtgagacaaaaagttgt 11090905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 359; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 242 - 720
Target Start/End: Original strand, 34585926 - 34586428
Alignment:
Q  242 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatagagac 341  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  34585926 cactactagaaaagtttcatatactgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccgaatataatgaacagagac 34586025  T
Q  342 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaannnnnnn 441  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  34586026 ggaattatatttttaacatcagagacggactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaaatttctt 34586125  T
Q  442 nnn--aattaattaaaaataactttttatccattcgctggg----------------------gccatatctcattttcacaggctccaaaatcgaattt 517  Q
         ||||||||||||||||||||||||||||||||||||                      |||||||||||||||||||||||||||||||||||||    
T  34586126 tttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggggccatatctcattttcacaggctccaaaatcgaattt 34586225  T
Q  518 cacttggctccaacccaaaacccccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaactcaaaattagaatcacttcatc 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34586226 cacttggctccaacccaaaacccccaattttttcatccctcaacttcaaatttctgcaaagccttaaaataatcaaactaaaaattagaatcacttcatc 34586325  T
Q  618 accaatttcacaaaagccctaaaatggcaatttcgaatcccttcatctccaattacacgccctgcaatagatctgcacatctaagttcaaatcccggttc 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34586326 accaatttcacaaaagccctaaaatggcaatttcgaatcccttcatctccaattacacgccctgcaatagatccgcacatctaagttcaaatcccggttc 34586425  T
Q  718 gtg 720  Q
    |||    
T  34586426 gtg 34586428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 7761658 - 7761591
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  7761658 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 7761591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 16177968 - 16177898
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaag 237  Q
    |||| |||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  16177968 ggacgaaattccattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaag 16177898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 30326416 - 30326350
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 233  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  30326416 ggacaaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 30326350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 34580177 - 34580232
Alignment:
Q  242 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtc 297  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34580177 cactactagaaaagtttcatatactgacggaatttagagacagattttattccgtc 34580232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 9717229 - 9717296
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  9717229 ggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 9717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 16104279 - 16104346
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||    
T  16104279 ggacaaaatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttggt 16104346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 19513774 - 19513707
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  19513774 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 19513707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 5278922 - 5278852
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||| ||||  |||||||||||    
T  5278922 gaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtggtttggt 5278852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 32497917 - 32497987
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  32497917 gaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 32497987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 44284634 - 44284688
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  44284634 ggacaaaatgctattttgttattttagacaacttgtacgtgagacaaaaagttgt 44284688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 7258913 - 7258969
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  7258913 tattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 7258969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 9733015 - 9732948
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||| ||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  9733015 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 9732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 33889248 - 33889315
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  33889248 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 33889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 34338815 - 34338882
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||| | || |||||||||||||  |||||||||||    
T  34338815 ggacaaaatgctattttggtattttagacaacttgtgcgtgggacaaaaagttgtgctgtggtttggt 34338882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 35114790 - 35114857
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||| |  ||||||||||||||    
T  35114790 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggt 35114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 37308660 - 37308727
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| ||||||||||||||||||||| |||||| || ||||||||||  ||||||||||||||    
T  37308660 ggacaaaatactattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggt 37308727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 40832554 - 40832487
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||    
T  40832554 ggacgaaatactattttggtattttagactacttgtacgtgagacaaaaagttgtgttgtggtttggt 40832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 42706364 - 42706431
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  42706364 ggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 42706431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 2645169 - 2645104
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||| |||||||||||||||||||||||||||  || |||||||||||||  |||||||||||    
T  2645169 acaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtggtttggt 2645104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 4641523 - 4641588
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||| |||||||||||||||| ||||||||||  ||||||||||||||||  |||||||||||    
T  4641523 acaaaatgctattttggtattttaaacaacttgtatgtgagacaaaaagttgtgctgtggtttggt 4641588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 10399955 - 10399901
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||    
T  10399955 ggacaaaatgctattttggatttttagacaacttatacatgagacaaaaagttgt 10399901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 39461319 - 39461373
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  39461319 ggacaaaatgctattttggtattttagacagcttgtacgtgagataaaaagttgt 39461373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 3913542 - 3913478
Alignment:
Q  172 caaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||| |||||||||||||||||||||||||||| ||  |||||||||  ||||||||||||||    
T  3913542 caaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggt 3913478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 12672560 - 12672492
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||| |||||||||||||||||||||||||||| || || ||||| |  ||||||||||||||    
T  12672560 aggacaaaatgctattttggtattttagacaacttgtacttgggataaaaacttgtgttgtggtttggt 12672492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 17540719 - 17540787
Alignment:
Q  169 ggacaaaattctatttt-ggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  17540719 ggacaaaatactatttttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 17540787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 26418939 - 26418995
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  26418939 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 26418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 12939385 - 12939318
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||| ||||||||||||||| ||||| ||||||||||  |||||||||||    
T  12939385 ggacaaaatgttattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggt 12939318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 30798574 - 30798507
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||| ||||||||| || || ||||||||||  |||||||||||    
T  30798574 ggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggt 30798507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 37003953 - 37003886
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  |||||||||||||||||||| |||||| || ||||||||||  ||||||||||||||    
T  37003953 ggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggt 37003886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 2086077 - 2086143
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 233  Q
    |||||||||  ||||||||||||| ||||||||||||| ||| ||||||||||||  ||||||||||    
T  2086077 ggacaaaatgttattttggtatttcagacaacttgtacgtgaaacaaaaagttgtactgtggtttgg 2086143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 6896173 - 6896227
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| |||| |||||||||| ||||||||||||||||| || |||||||||||||    
T  6896173 ggacgaaatgctattttggtgttttagacaacttgtacgtgggacaaaaagttgt 6896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 18793347 - 18793297
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||| ||||    
T  18793347 aggacaaaatgttattttggtattttagacaacttgtacgtgagactaaaa 18793297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 33889127 - 33889188
Alignment:
Q  48 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||||  ||||||| ||||| | || |||| |||||||||||||||||||    
T  33889127 tagggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaa 33889188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 38993151 - 38993102
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  38993151 aaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgt 38993102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 41366184 - 41366128
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||||||||||||||||||||  ||||||||||| |  ||||||||||||||    
T  41366184 tattttggtattttagacaacttgtatgtgagacaaaaaattgtgttgtggtttggt 41366128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 11114877 - 11114944
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| ||||||||| |||||||||||||||| | || |||||||||||||  |||||||||||    
T  11114877 ggacgaaatactattttggaattttagacaacttgtgcgtgggacaaaaagttgtgatgtggtttggt 11114944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 18685841 - 18685908
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||  ||||||||||||||||||| || |||||||||||||  |||||||||||    
T  18685841 ggacaaaatgttattttaatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 18685908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 33366615 - 33366682
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||  || || |||||||  ||||||||||||||    
T  33366615 ggacaaaatgttattttggtattttagacaacttgtatgtgggagaaaaagttgtgttgtggtttggt 33366682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 26796247 - 26796286
Alignment:
Q  183 tttggtattttagacaacttgtacatgagacaaaaagttg 222  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  26796247 tttggtattttagacaacttgtacgtgtgacaaaaagttg 26796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 28824637 - 28824575
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| ||||||| ||||||||||||||||| || ||||| ||||||||||  |||||||||||    
T  28824637 aaatgctattttagtattttagacaacttgcacgtgagataaaaagttgtgatgtggtttggt 28824575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 41934586 - 41934640
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||| ||| |  |||||||||||||    
T  41934586 ggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgt 41934640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 42365582 - 42365636
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||||| | ||| | ||||||||||    
T  42365582 ggacaaaatgttattttggtattttagacaacttgtccgtgatataaaaagttgt 42365636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 40692321 - 40692369
Alignment:
Q  188 tattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||| || |||||||||||||  |||||||||||    
T  40692321 tattttagacaacttgtacgtgggacaaaaagttgttctgtggtttggt 40692369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 225; Significance: 1e-123; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 241 - 544
Target Start/End: Complemental strand, 11198350 - 11198047
Alignment:
Q  241 acactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatagaga 340  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  11198350 acactactagaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagacggaagttgagaccg-atataatgaacagaga 11198252  T
Q  341 cggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcaaacaggtcaa--nnnn 438  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||          
T  11198251 cggaattttatttttaacatc-gagacagactttagagacggattgtaccgtcacaaaattattctgtctccaattccgtctcacacaggtcaaatttct 11198153  T
Q  439 nnnnnnaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaac 538  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11198152 ttttttaattaattaaaaataactttttatccattcgctggggccatatctcattttcacaggctccaaaatcgaatttcacttggctccaacccaaaac 11198053  T
Q  539 ccccaa 544  Q
    ||||||    
T  11198052 ccccaa 11198047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 53557877 - 53557820
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  53557877 gaaggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgt 53557820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 1344786 - 1344719
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  1344786 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 1344719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 21221439 - 21221372
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  21221439 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 21221372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 29584878 - 29584948
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  29584878 gaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 29584948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 3964294 - 3964361
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  3964294 ggacgaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggt 3964361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 20609727 - 20609660
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  20609727 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 20609660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 24571287 - 24571354
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  24571287 ggacaaaatcctatttttgtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggt 24571354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 28675796 - 28675863
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  28675796 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 28675863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 3864754 - 3864688
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 233  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  |||||||||||||    
T  3864754 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 3864688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 50678809 - 50678871
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  50678809 aaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 50678871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 4851535 - 4851481
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  4851535 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 4851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 25860498 - 25860433
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  25860498 acaaaatgctatttcggtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggt 25860433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 33364857 - 33364803
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  33364857 ggacaaaatgctattttgatattttagacaacttgtacgtgagacaaaaagttgt 33364803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 47958511 - 47958457
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  47958511 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 47958457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 12349250 - 12349183
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||| ||||||||  |||||||||||    
T  12349250 ggacaaaatgctattttggtattttagacaacttgtacgtgggacataaagttgtgctgtggtttggt 12349183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 19906768 - 19906835
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||    
T  19906768 ggacgaaatgctattttggtgttttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 19906835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 29646072 - 29646139
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||| ||||||||||| || |||||||||||||  |||||||||||    
T  29646072 ggacaaaatgctattttggtattttaaacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 29646139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 34026673 - 34026740
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||| |  ||||||||||||||    
T  34026673 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggt 34026740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 39052917 - 39052850
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  39052917 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 39052850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 40094509 - 40094576
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||  |||||||||||    
T  40094509 ggacaaaatgctattttggtattttagacaatttgtacgtgaaacaaaaagttgtgatgtggtttggt 40094576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 42636482 - 42636415
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  42636482 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 42636415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 21373941 - 21374003
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  21373941 aaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 21374003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 25927404 - 25927335
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 238  Q
    |||||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||| ||||||||||    
T  25927404 acaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaagg 25927335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 26282466 - 26282412
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||| ||| || |||||||||||||    
T  26282466 ggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgt 26282412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 31883101 - 31883047
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  31883101 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 31883047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 38213360 - 38213414
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  38213360 ggacaaaatggtattttggtattttagacaacttgtacgtgggacaaaaagttgt 38213414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 44116945 - 44116999
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  44116945 ggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgt 44116999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 51259859 - 51259805
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  51259859 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 51259805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 3695367 - 3695304
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||||||||||||||||||||||||||| || ||||||| |||||  |||||||||||    
T  3695367 aaaatactattttggtattttagacaacttgtacgtgggacaaaaggttgtgatgtggtttggt 3695304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 14155528 - 14155485
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  14155528 tattttgatattttagacaacttgtacttgagacaaaaagttgt 14155485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 32621886 - 32621924
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  32621886 tattttggtattttagacaacttgtacatgggacaaaaa 32621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 54622875 - 54622821
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| |||| |||||||||||||||||||||||||||| || || ||||||||||    
T  54622875 ggacgaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgt 54622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 2135076 - 2135143
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||| | |||||||||||||||||| || |||||| || |||||||||||||  |||||||||||    
T  2135076 ggacaaagtgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggt 2135143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 3867728 - 3867661
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||| ||||||| ||||||||| |  |||||||||||||  |||||||||||    
T  3867728 ggacaaaatgctattttggtgttttagaaaacttgtacgtaggacaaaaagttgtgctgtggtttggt 3867661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 39215547 - 39215499
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    ||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  39215547 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 39215499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 44116829 - 44116885
Alignment:
Q  53 tgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    ||||||||||||  ||||||||||||| | ||||||| ||||||||||||| |||||    
T  44116829 tgtgtttggtttgcaaaacagcaagtactggatagaacagtacaacacaagtcagaa 44116885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 50386533 - 50386481
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||| |||||||| ||||||||||||||||||| |  |||||||||||||    
T  50386533 acaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgt 50386481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 51296587 - 51296654
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| ||||||| |||||||||||||||||||| |  |||||||| |  ||||||||||||||    
T  51296587 ggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgttgtggtttggt 51296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 8648625 - 8648582
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||||||||||||| |||||| || |||||||||||||    
T  8648625 tattttggtattttagacaatttgtacttgtgacaaaaagttgt 8648582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 20609846 - 20609787
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||  ||||||| ||||| | || |||| |||||||||||||||||||    
T  20609846 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaa 20609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 34026554 - 34026613
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||  ||||||| ||||| | || |||| |||||||||||||||||||    
T  34026554 gggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaa 34026613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 42636597 - 42636542
Alignment:
Q  54 gtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||  |||||| |||||| | || ||||||||||||||||||||||||    
T  42636597 gtgtttggtttgcaaaacaacaagtactagacagaatagtacaacacaaggcagaa 42636542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 45690981 - 45690926
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||| |||| | |||||||||||||||||||||| | | ||||||||||||||||    
T  45690981 aggacgaaatgcgattttggtattttagacaacttatgcgtgagacaaaaagttgt 45690926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 5442301 - 5442351
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||| |||||||| ||||||||||| ||||||| || |||||||||||||    
T  5442301 aaaatgctattttgatattttagacagcttgtacgtgggacaaaaagttgt 5442351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 41694980 - 41694926
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||  |||||||||||||||||||  || |||||||||||||    
T  41694980 ggacaaaatgctatttcagtattttagacaacttgtatgtgggacaaaaagttgt 41694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 10747224 - 10747261
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtac 206  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  10747224 ggacaaaatgctattttgatattttagacaacttgtac 10747261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 22484817 - 22484768
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| ||||||| |||||||||||||||| ||| || |||||||||||||    
T  22484817 aaatgctatttttgtattttagacaacttatacgtgggacaaaaagttgt 22484768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 49748979 - 49748923
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||||||| | ||||||||||| || ||||||||||  ||||||||||||||    
T  49748979 tattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 49748923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 242 - 398
Target Start/End: Complemental strand, 21987962 - 21987806
Alignment:
Q  242 cactactaaaaaagtttcatataccgacggaatttagagacagattttattccgtctctgatagagatggaagttgagaccgaatataatgaatagagac 341  Q
    |||||||| |||||| ||| ||||||||||||||||||||| |||||| |||| |||||| |||||| |||  ||||||| || | |||    |||||||    
T  21987962 cactactagaaaagtctcaaataccgacggaatttagagacggatttttttccatctctgttagagacggatattgagacggattctaacatgtagagac 21987863  T
Q  342 ggaattttatttttaacatcagagacggattttagagacggattgtaccgtcacaaa 398  Q
    ||| ||| | ||||||| | ||||||||||||||||||| |||| |||| |||||||    
T  21987862 ggagtttgaattttaactttagagacggattttagagacagattttaccatcacaaa 21987806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 12600894 - 12600948
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  12600894 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgt 12600948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 37865761 - 37865815
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  37865761 ggacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgt 37865815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 9512418 - 9512351
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  9512418 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 9512351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 20802609 - 20802542
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  20802609 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 20802542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 23521888 - 23521955
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  23521888 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 23521955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 33552920 - 33552853
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  33552920 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 33552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 43641107 - 43641174
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  43641107 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 43641174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 46680588 - 46680517
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggtaagg 238  Q
    ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||    
T  46680588 ggacaaaatgctattatggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttggtaagg 46680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 50729620 - 50729553
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  50729620 ggacgaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggt 50729553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 56154629 - 56154696
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  56154629 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 56154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 55065414 - 55065344
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||||| |||||||| ||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  55065414 gaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 55065344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 4325799 - 4325853
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  4325799 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 4325853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 36743766 - 36743712
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  36743766 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 36743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 38812530 - 38812595
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  38812530 acaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 38812595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 44649242 - 44649188
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  44649242 ggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgt 44649188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 2725210 - 2725144
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2725210 ggacaaaatgctattttggtattttagacaacttgtacgtg-gacaaaaagttgtgatgtggtttggt 2725144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 20694379 - 20694446
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt--gttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| |  |||||||||||  |||||||||||||    
T  20694379 ggacaaaatgctattttggtattttagacaacttgtacgttggacaaaaagttgcgttgtggtttggt 20694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 21202747 - 21202814
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||| ||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  21202747 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 21202814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 21580034 - 21580101
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||| || ||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||    
T  21580034 ggacaacatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgatgtggtttggt 21580101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 24002351 - 24002414
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  24002351 aaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 24002414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 29785615 - 29785548
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaag--ttgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||   ||||||||||||||    
T  29785615 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagctgtgttgtggtttggt 29785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 32181271 - 32181338
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  32181271 ggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggt 32181338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 38486335 - 38486268
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||  |||||||||||    
T  38486335 ggacaaaatgctattttgatattttagacaacttgtacgttagacaaaaagttgtgctgtggtttggt 38486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 41711855 - 41711922
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| |||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||    
T  41711855 ggacgaaatgctattttggtattttagacaacctgtacgtgagacaaaaagttgtactgtggtttggt 41711922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 2630018 - 2629975
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  2630018 tattttggtattttagacaacttgtacgtgagacaaaaagttgt 2629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 47642569 - 47642515
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  47642569 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 47642515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 50727991 - 50727937
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  50727991 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 50727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 50736005 - 50735951
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  50736005 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 50735951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 52949728 - 52949782
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  52949728 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 52949782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 9807163 - 9807231
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||| |||||||||||||||||||||||||||| |  |||||||||||||  |||||||||||    
T  9807163 aggacgaaatgctattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggt 9807231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 20518100 - 20518048
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 221  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||| |||||    
T  20518100 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaagaagtt 20518048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 24210331 - 24210394
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||||||||||||||||||||||||||| || || ||||||||||  |||||||||||    
T  24210331 aaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttggt 24210394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 28115260 - 28115327
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||| |||||||||||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  28115260 ggacgaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 28115327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 33177110 - 33177043
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||| | || ||||||||||  ||||||||||||||    
T  33177110 ggacaaaatgttattttggtattttagacaacttgtgcgtgggacaaaaagttgtgttgtggtttggt 33177043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 34929923 - 34929990
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||| |||||||||||||||||| ||| | |||||||||||  |||||||||||    
T  34929923 ggacaaaatgctattttgatattttagacaacttgtatatggggcaaaaagttgtgctgtggtttggt 34929990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 55593893 - 55593960
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || || ||||||||||  |||||||||||    
T  55593893 ggacaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttggt 55593960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 1231319 - 1231373
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||| ||||||||||||||||||| || |||||||||||||    
T  1231319 ggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 1231373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 29616178 - 29616232
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  |||||||||||||||||||| |||||| || |||||||||||||    
T  29616178 ggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgt 29616232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 40792425 - 40792479
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||  ||||||| |||||||||| ||||||||||||| ||||||||||||    
T  40792425 ggacaaaaagctatttttgtattttagataacttgtacatgaaacaaaaagttgt 40792479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 47361603 - 47361537
Alignment:
Q  53 tgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatga 119  Q
    ||||||||||||| ||||||  ||||||| || |||| ||||||||||||||||||| | |||||||    
T  47361603 tgtgtttggtttacaaaacaataagtattggacagaacagtacaacacaaggcagaacagcacatga 47361537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 3649655 - 3649711
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| ||||||||||||||||| || |||||||||||||  |||||||||||    
T  3649655 tattttggtgttttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 3649711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 7555030 - 7554981
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||    
T  7555030 aaatgctattttggatttttagacaacttgtacgtgagacaaaaagttgt 7554981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 29616059 - 29616128
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatga 119  Q
    |||||||||||||||  |||| |||||||| |||| |||| ||||||||||||| ||||| | |||||||    
T  29616059 gggtgtgtttggtttgcaaaatagcaagtacttgacagaacagtacaacacaagacagaacaacacatga 29616128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 50178571 - 50178522
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    ||||||||| |||||||| ||||||||||||||||||| || ||||||||    
T  50178571 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaa 50178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 14296606 - 14296654
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    ||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  14296606 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 14314854 - 14314902
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    ||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  14314854 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 36885940 - 36886007
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||| |||||||||||||| |||||| || || ||||||||||  |||||||||||    
T  36885940 ggacaaaatgctatttaggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggt 36886007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 44324420 - 44324353
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| |||||||||||||| | ||||||||||| || |||||||||||||  |||||||||||    
T  44324420 ggacgaaatgctattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 44324353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 52319331 - 52319398
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  |||||||  |||||||||||||||||| || |||||||||||||  |||||||||||    
T  52319331 ggacaaaatgttattttgacattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 52319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 54542998 - 54543046
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaa 217  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||    
T  54542998 ggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaa 54543046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 16320532 - 16320594
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||||| ||||||||| |||| ||||| || ||||||||||  ||||||||||||||    
T  16320532 aaattctatttttgtattttaggcaacctgtacgtgggacaaaaagttgtgttgtggtttggt 16320594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 22318461 - 22318395
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||  ||||||||| ||||||||||||| ||| | |||||||||||  ||||||||||||||    
T  22318461 gacaaaatgttattttggtgttttagacaacttctacgtaagacaaaaagttgtgttgtggtttggt 22318395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 47361487 - 47361452
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgt 204  Q
    ||||||||| ||||||||||||||||||||||||||    
T  47361487 ggacaaaatgctattttggtattttagacaacttgt 47361452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 23327937 - 23327975
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  23327937 tattttggtattttagacaacttgtacgtgggacaaaaa 23327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 33553041 - 33552983
Alignment:
Q  48 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggca 106  Q
    |||| ||||||||||||  ||||||||||||| | || |||| ||||||||||||||||    
T  33553041 taggatgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggca 33552983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 45577758 - 45577716
Alignment:
Q  181 attttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||||||||||||| || || |||||||||||||    
T  45577758 attttggtattttagacaacttgcacgtgggacaaaaagttgt 45577716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 11056061 - 11056121
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 238  Q
    |||||||||||||| |||||  |||||||| |||| |||||  ||||||||||||||||||    
T  11056061 tattttggtatttttgacaatctgtacatgggacataaagttgtgttgtggtttggtaagg 11056121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 6386581 - 6386648
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  6386581 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 6386648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 7394917 - 7394860
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  7394917 gaaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgt 7394860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 4052485 - 4052552
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  4052485 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 4052552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 8673155 - 8673088
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  8673155 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 8673088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 29563326 - 29563259
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  29563326 ggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 29563259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 31732069 - 31732136
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  31732069 ggacaaaatgctattttggtattttagacaacttgtatgtgagacaaaaagttgtactgtggtttggt 31732136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 32303685 - 32303618
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  32303685 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 32303618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 45446460 - 45446527
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  45446460 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 45446527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 31513686 - 31513616
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||||| |||||||||||||||||||||||||||| |  |||||||||||||  |||||||||||    
T  31513686 gaaggacaaaatgctattttggtattttagacaacttgtacctaggacaaaaagttgtgctgtggtttggt 31513616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 34063133 - 34063199
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 233  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||||||    
T  34063133 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 34063199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 37664382 - 37664316
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  37664382 gacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 37664316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 21272687 - 21272756
Alignment:
Q  167 aaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||| ||||||| |||||||||||||||||||| || |||||||||||||  |||||||||||    
T  21272687 aaggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 21272756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 11944890 - 11944934
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  11944890 ctattttggtattttagacaaattgtacatgagacaaaaagttgt 11944934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 14005144 - 14005077
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  14005144 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 14005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 29672423 - 29672356
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||| ||||||||| || ||||||||||  ||||||||||||||    
T  29672423 ggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggt 29672356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 32020101 - 32020034
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||||    
T  32020101 ggacaaaatactattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggt 32020034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 13407033 - 13406986
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  13407033 acaaaatgctattttggtattttagacaacttgtacgtgagacaaaaa 13406986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 17805695 - 17805750
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||    
T  17805695 aggacaaaatgttattttggtattttagacaacttgtacgtgagacaaagagttgt 17805750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 10467069 - 10467123
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  10467069 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 10467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 11926920 - 11926878
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagtt 221  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  11926920 ctattttggtattttagacaaattgtacatgagacaaaaagtt 11926878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 25478248 - 25478302
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| |  |||||||||||||    
T  25478248 ggacaaaatactattttggtattttagacaacttgtacgtaggacaaaaagttgt 25478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 27103964 - 27104018
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  27103964 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 27104018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 45114059 - 45114127
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||| |||||||||||||||||||||||||||| |  |||||||||||||  |||||||||||    
T  45114059 aggacgaaatgctattttggtattttagacaacttgtacctatgacaaaaagttgtactgtggtttggt 45114127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 12753425 - 12753358
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  12753425 ggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 12753358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 30543122 - 30543055
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| ||||||  ||||||||||||||    
T  30543122 ggacaaaatgttattttggtattttagacaacttgtacgtgggacgaaaagttgtgttgtggtttggt 30543055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 34101513 - 34101580
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| ||  | |||||||  ||||||||||||||    
T  34101513 ggacaaaatgctattttggtattttagacaacttgtacgtggaaaaaaaagttatgttgtggtttggt 34101580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 37618492 - 37618425
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||| |||||||||||||| | ||||||||||| |||||||||||||  ||||||||||||||    
T  37618492 ggacgaaatgctattttggtatttaaaacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 37618425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 41709782 - 41709849
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||| ||||||||| |  |||||||||||||  |||||||||||    
T  41709782 ggacaaaatgctattttggtattttagataacttgtacgttggacaaaaagttgtgctgtggtttggt 41709849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 4052368 - 4052427
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||  ||||||||||||| | || |||| |||||||||||||||||||    
T  4052368 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaa 4052427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 15001476 - 15001538
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||||||||||||||||| ||||||||| || ||||||||||  ||||||||||||||    
T  15001476 aaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggt 15001538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 7591547 - 7591493
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||| ||| || |||||||||||||    
T  7591547 ggacaaaatgctattttgatattttagacaacttatacgtgtgacaaaaagttgt 7591493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 35225672 - 35225733
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 233  Q
    |||| ||||||| |||||||||||||||||||| || |||||||||||||  ||||||||||    
T  35225672 aaatgctatttttgtattttagacaacttgtacttgtgacaaaaagttgtgatgtggtttgg 35225733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 36426347 - 36426297
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaag 219  Q
    ||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  36426347 ggacaaaagactattttggtattttagacaacttgtatgtgagacaaaaag 36426297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 41548623 - 41548677
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||| ||||||||||||||||||| || |||||||||||||    
T  41548623 ggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 41548677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 3251756 - 3251689
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| |  || ||||||||||  |||||||||||    
T  3251756 ggacaaaatgttattttggtattttagacaacttgtacgtaggataaaaagttgtgatgtggtttggt 3251689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 5968964 - 5968897
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  |||||||||||||||||||| |||||| || || ||||||||||  |||||||||||    
T  5968964 ggacaaaatgttattttggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggt 5968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 14005264 - 14005204
Alignment:
Q  49 agggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    ||||||||||||||||  ||||||||||||| | || |||| ||||||||||||| |||||    
T  14005264 agggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaagacagaa 14005204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 10656775 - 10656732
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||    
T  10656775 tattttgatattttagacaatttgtacgtgagacaaaaagttgt 10656732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 15351751 - 15351794
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||||||||||||| |||||  ||||||||||||||||    
T  15351751 tattttggtattttagacaatttgtaactgagacaaaaagttgt 15351794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 29611155 - 29611089
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 233  Q
    |||| |||| |||||||||| ||||||||||||| ||| || ||||||||||  |||||||||||||    
T  29611155 ggacgaaatgctattttggtgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttgg 29611089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 37861765 - 37861836
Alignment:
Q  48 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaatatcacatga 119  Q
    ||||||||||||| |||  ||||||| ||||| | || |||| ||||||||||||||||||| | |||||||    
T  37861765 tagggtgtgtttgatttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaacagcacatga 37861836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 37861866 - 37861901
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtac 206  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37861866 acaaaatgctattttggtattttagacaacttgtac 37861901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 39642893 - 39642955
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||||||||||||||||||||| ||||| || |||| |||||  ||||||||||||||    
T  39642893 aaatgctattttggtattttagacaacctgtacgtgggacagaaagttgtgttgtggtttggt 39642955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 3361843 - 3361789
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||  ||||||||||||||| ||||| ||||||||||    
T  3361843 ggacaaaatgttattttggtagattagacaacttgtacttgagagaaaaagttgt 3361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 5859572 - 5859518
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||| |||||||||| ||||||||| |  |||||||||||||    
T  5859572 ggacaaaatactattttagtattttagataacttgtacgtatgacaaaaagttgt 5859518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 22999261 - 22999311
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    |||||||||| |||||||| |||||||||||| |||||| || ||||||||    
T  22999261 aggacaaaatgctattttgatattttagacaagttgtacgtgggacaaaaa 22999311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 955168 - 955123
Alignment:
Q  52 gtgtgtttggtttataaaacagcaagtatttgatagaatagtacaa 97  Q
    |||||||||||||| ||||||||||||| |||| |||| |||||||    
T  955168 gtgtgtttggtttacaaaacagcaagtacttgacagaacagtacaa 955123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 6460266 - 6460315
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    |||||||||  ||||||||||||||||||||||| ||| || ||||||||    
T  6460266 ggacaaaatgttattttggtattttagacaacttatacgtgggacaaaaa 6460315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 27109630 - 27109570
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 238  Q
    ||||||||||||||| |||| ||||||  | ||||||||||  ||||||||||||||||||    
T  27109630 tattttggtattttaaacaatttgtacgcgggacaaaaagttgtgttgtggtttggtaagg 27109570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 30501161 - 30501217
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||| ||||||||| |||||||||| || |||||||||||||  |||||||||||    
T  30501161 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggt 30501217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 30543239 - 30543182
Alignment:
Q  52 gtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||  |||| || ||||||| || |||| |||||||||||||||||||    
T  30543239 gtgtgtttggtttgcaaaatagtaagtattggacagaacagtacaacacaaggcagaa 30543182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 11382069 - 11382136
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  11382069 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 11382136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 2614901 - 2614968
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2614901 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 2614968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 10324235 - 10324168
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  10324235 ggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 10324168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 11279137 - 11279200
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  11279137 aaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 11279200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 24242669 - 24242736
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  24242669 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 24242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 17443266 - 17443334
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  17443266 aggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggt 17443334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 18057523 - 18057591
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  18057523 aggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggt 18057591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 167047 - 166980
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  167047 ggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 166980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 3259688 - 3259755
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || || |||||||  ||||||||||||||    
T  3259688 ggacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttggt 3259755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 3932931 - 3932864
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  3932931 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 3932864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 11613915 - 11613848
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||| ||||||||||| || |||||||||||||  |||||||||||    
T  11613915 ggacaaaatgctattttggtattttatacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 11613848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 24203367 - 24203434
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  24203367 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 24203434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 15277403 - 15277337
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||| |||||||||||||||||||||||||||| || || ||||||||||  |||||||||||    
T  15277403 gacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggt 15277337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 10485162 - 10485216
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  10485162 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 10485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 10960005 - 10960059
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  10960005 ggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgt 10960059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 17867840 - 17867894
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||||||||||||||||| |||||| || |||||||||||||    
T  17867840 ggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgt 17867894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 17877623 - 17877677
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||||||||||||||||| |||||| || |||||||||||||    
T  17877623 ggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgt 17877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 32132504 - 32132450
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  32132504 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 32132450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 34176835 - 34176889
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||||||||||||||| |||||||| || |||||||||||||    
T  34176835 ggacaaaatgctattttggtattttagactacttgtacgtgggacaaaaagttgt 34176889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 8177994 - 8177934
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 238  Q
    |||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||||    
T  8177994 tattttggtattttagacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagg 8177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 4494239 - 4494172
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||| ||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  4494239 ggacaaaatgttatttcggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggt 4494172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 11212262 - 11212329
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  |||||||||||||||||||||||| || |||||||||| ||  ||||||||||||||    
T  11212262 ggacaaaatgttattttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttggt 11212329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 32409976 - 32409909
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| ||||||||||||||||||||||||||   || |||||||||||||  |||||||||||    
T  32409976 ggacaaaatactattttggtattttagacaacttgtgagtgggacaaaaagttgtgatgtggtttggt 32409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 3379714 - 3379769
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||| |||| |||||||||||||| ||||||||||||  ||||||||||||||||    
T  3379714 aggacgaaatgctattttggtatttaagacaacttgtatgtgagacaaaaagttgt 3379769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 9902771 - 9902728
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||||||||||||||||| || |||||||||||||    
T  9902771 tattttggtattttagacaacttgtacgtgggacaaaaagttgt 9902728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 7396249 - 7396195
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||  ||||||| |||||||||| ||||||||| ||||||||||||||||    
T  7396249 ggacaaaacactatttttgtattttagataacttgtacgtgagacaaaaagttgt 7396195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 14925570 - 14925513
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||||||||||||||||||||  || |||||||||||||  |||||||||||    
T  14925570 ctattttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggtttggt 14925513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 34684109 - 34684040
Alignment:
Q  168 aggacaaaattctattttggtatttt-agacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||  |||||||||  ||||||||||||||    
T  34684109 aggacaaaatgctattttggtatttttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggt 34684040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 3290677 - 3290746
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgttgtggtttggtaagg 238  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||    ||||||||||||||||||    
T  3290677 ggacaaaatgctattttggtattttagacaacttatacgtgggaaaaagttgtgttgtggtttggtaagg 3290746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 29054379 - 29054427
Alignment:
Q  187 gtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 233  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  29054379 gtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 29054427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 15277061 - 15276994
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||| | ||||||||||||||||| || || ||||||||||  |||||||||||    
T  15277061 ggacaaaatgctattttgttcttttagacaacttgtacgtgggaaaaaaagttgtgatgtggtttggt 15276994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 13994235 - 13994168
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  13994235 ggacgaaatgctattttggtattttagacaacttgtacatgagacaaaaagttgtgttgtggtttggt 13994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 41968008 - 41967938
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 238  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  41968008 gacaaaaggctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagg 41967938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 28340463 - 28340409
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  28340463 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgt 28340409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 844884 - 844817
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  844884 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 844817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 16386868 - 16386935
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  16386868 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 16386935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 32270367 - 32270434
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||    
T  32270367 ggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggt 32270434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 41972925 - 41972992
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  41972925 ggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggt 41972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 42510539 - 42510606
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  42510539 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 42510606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 45491035 - 45490968
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  45491035 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 45490968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 1351594 - 1351528
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  1351594 gacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 1351528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 16437373 - 16437443
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||||| |||||||| ||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  16437373 gaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 16437443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 16476315 - 16476261
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  16476315 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 16476261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 50540358 - 50540412
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  50540358 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 50540412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 16704739 - 16704811
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggtaagg 238  Q
    |||||||||  |||||||||||||||||||||||||||  ||||||||| ||||||  |||||||||||||||    
T  16704739 aggacaaaaagctattttggtattttagacaacttgtatgtgagacaaagagttgtgatgtggtttggtaagg 16704811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 1601187 - 1601254
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  1601187 ggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 1601254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 6711206 - 6711139
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||| |  ||||||||||||||    
T  6711206 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggt 6711139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 16451141 - 16451208
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||  || ||||||||||  ||||||||||||||    
T  16451141 ggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 16451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 26733579 - 26733623
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  26733579 ctattttggtattttagacaacttgtacatgaggcaaaaagttgt 26733623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 30105840 - 30105788
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 221  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||    
T  30105840 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagtt 30105788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 31004146 - 31004213
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  31004146 ggacgaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 31004213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 7183933 - 7184003
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 238  Q
    |||||||| |||| ||||||||||||||||||||||| |  ||||||||||  ||||||||||||||||||    
T  7183933 gacaaaatactatattggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtaagg 7184003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 17887962 - 17888028
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 233  Q
    |||||||||  ||||||||||||||||||||||||||| || ||||||||||  |||||||||||||    
T  17887962 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 17888028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 12890252 - 12890306
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||| ||||||||||||||| || |||||||||||||    
T  12890252 ggacaaaatgctattttggtatcttagacaacttgtacgtgggacaaaaagttgt 12890306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 17327809 - 17327755
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||| || |||||||||||||||||||||||    
T  17327809 ggacaaaatattattttggtattttagataatttgtacatgagacaaaaagttgt 17327755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 26118375 - 26118321
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||| ||| || |||||||||||||    
T  26118375 ggacaaaatgctattttggtattttagacaacttttacgtgggacaaaaagttgt 26118321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 51264507 - 51264576
Alignment:
Q  167 aaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||||| ||||||| |||||||| ||||||||||| || ||||||||||  ||||||||||||||    
T  51264507 aaggacaaaatgctattttagtattttaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 51264576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 30105961 - 30105900
Alignment:
Q  48 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||||  ||||||||||||| | || |||| |||||||||||||||||||    
T  30105961 tagggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaa 30105900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 46154911 - 46154968
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||  ||||||||||||||||||||||||||  || |||||||||||||    
T  46154911 gaaggacaaaatgttattttggtattttagacaacttgtaagtgggacaaaaagttgt 46154968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 32289504 - 32289437
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||| ||||||||||| ||  ||||||||||||  |||||||||||    
T  32289504 ggacaaaatgctattttggtattttaaacaacttgtacgtggaacaaaaagttgtgctgtggtttggt 32289437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 35387467 - 35387404
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||||    
T  35387467 aaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggt 35387404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 26118494 - 26118435
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||  ||||||||||||| | || |||| |||||||||||||||||||    
T  26118494 gggtgtgtttggtttgcaaaacagcaagtactggacagaacagtacaacacaaggcagaa 26118435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 26764944 - 26764901
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||||||||||||||||| || |||||||||||||    
T  26764944 tattttggtattttagacaacttgtacgtgggacaaaaagttgt 26764901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 50304664 - 50304719
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||| |||||||| |||||||||||||||  || ||||||||||||||||    
T  50304664 aggacaaaatgctattttgatattttagacaacttaaacgtgagacaaaaagttgt 50304719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 38663146 - 38663200
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||| ||||||||||||||||||| || |||||||||||||    
T  38663146 ggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 38663200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 42512930 - 42512876
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||||||||||| |||||||||||| |||||| |  |||||||||||||    
T  42512930 ggacaaaattctattttgatattttagacaatttgtacgtaggacaaaaagttgt 42512876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 44738192 - 44738135
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||| ||||||||||||||||||| || |||||||||||||  |||||||||||    
T  44738192 ctattttgctattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 44738135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 6029450 - 6029394
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||||    
T  6029450 tattttggtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 6029394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 20495051 - 20495014
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtac 206  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  20495051 ggacaaaatgctattttggtattttagacaacttgtac 20495014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 39281919 - 39281975
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||||||||| |  |||||||||||||  |||||||||||    
T  39281919 tattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggt 39281975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 7837149 - 7837201
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||| |||||||| |||||||||||||||||   ||||||||||||||||    
T  7837149 acaaaatactattttgatattttagacaacttgtctgtgagacaaaaagttgt 7837201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 24339789 - 24339745
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||||||||||||||||||||| || || ||||||||||    
T  24339789 ctattttggtattttagacaacttgtacgtgggaaaaaaagttgt 24339745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 50382563 - 50382496
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  |||||| || ||||||||||||||||| || ||||||||||  ||||||||||||||    
T  50382563 ggacaaaatgttatttttgtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 50382496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 2761715 - 2761662
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||| |||||||| |||||||||| || |||||| ||||||||||| ||||    
T  2761715 gacaaaaatctatttttgtattttagataatttgtacttgagacaaaaaattgt 2761662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 38087151 - 38087102
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| |||||||||  ||||||||||||||||| || |||||||||||||    
T  38087151 aaatgctattttggatttttagacaacttgtacttgggacaaaaagttgt 38087102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 49799391 - 49799424
Alignment:
Q  169 ggacaaaattctattttggtattttagacaactt 202  Q
    |||||||| |||||||||||||||||||||||||    
T  49799391 ggacaaaagtctattttggtattttagacaactt 49799424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 7e-17; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 21784879 - 21784947
Alignment:
Q  168 aggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  21784879 aggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 21784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 11321971 - 11321904
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  11321971 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 11321904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 18386534 - 18386601
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  18386534 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 18386601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 26994311 - 26994244
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  26994311 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 26994244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 32873855 - 32873788
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  32873855 ggacaaaatgctattttggtatttcagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 32873788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 44748704 - 44748771
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttg--ttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  44748704 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtattgtggtttggt 44748771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 46633706 - 46633773
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  46633706 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 46633773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 47953199 - 47953266
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  47953199 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 47953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 36769654 - 36769588
Alignment:
Q  170 gacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  36769654 gacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 36769588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 10932643 - 10932589
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  10932643 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 10932589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 40753164 - 40753218
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  40753164 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 40753218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 47947769 - 47947823
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  47947769 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgt 47947823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 3922789 - 3922722
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||| ||||||||| || |||||||||||||  |||||||||||    
T  3922789 ggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgctgtggtttggt 3922722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 41211282 - 41211219
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  41211282 aaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 41211219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 43158772 - 43158701
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggtaagg 238  Q
    ||||||||| |||||||| | ||||||||||||||||| || ||||||||||  ||||||||||||||||||    
T  43158772 ggacaaaatgctattttgatgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtaagg 43158701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 26371895 - 26371841
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  26371895 ggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgt 26371841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 26652875 - 26652929
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  26652875 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 26652929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 34295490 - 34295436
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  34295490 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 34295436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 41665656 - 41665595
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttgg 233  Q
    |||| ||||||| |||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  41665656 aaatgctatttttgtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttgg 41665595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 329479 - 329546
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||| |||||| |||||||||| || |||||||||||||  |||||||||||    
T  329479 ggacaaaatgctattttggtgttttaggcaacttgtacgtgggacaaaaagttgtgatgtggtttggt 329546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 1870144 - 1870211
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||| ||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  1870144 ggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 1870211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 7958635 - 7958687
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 221  Q
    ||||||||  |||||||||||||||||||||||||||| | ||||||||||||    
T  7958635 ggacaaaaaactattttggtattttagacaacttgtacttcagacaaaaagtt 7958687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 18470693 - 18470745
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagtt 221  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||    
T  18470693 ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagtt 18470745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 29661332 - 29661399
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||| ||||||||| || || ||||||||||  |||||||||||    
T  29661332 ggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgctgtggtttggt 29661399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 30849332 - 30849265
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||||||||  ||||||||||||||| |||||||||| ||| ||||||||||  ||||||||||||||    
T  30849332 ggacaaaatgttattttggtattttatacaacttgtatatgggacaaaaagttgtgttgtggtttggt 30849265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 43189328 - 43189261
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| ||||||||||||| |||||||||||||| || || |||||||  ||||||||||||||    
T  43189328 ggacaaaatactattttggtattctagacaacttgtacgtgggataaaaagttgtgttgtggtttggt 43189261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 47316784 - 47316717
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| ||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||||    
T  47316784 ggacaaaatgctattttggtaatttagacaacttgcatgtgagacaaaaagttgtgttgtggtttggt 47316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 30599094 - 30599040
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||| || |||||| ||||||||||||||||    
T  30599094 ggacaaaatgttattttggtattttagataatttgtacttgagacaaaaagttgt 30599040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 43368210 - 43368264
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| |  |||||||||||||    
T  43368210 ggacaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgt 43368264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 16962985 - 16963046
Alignment:
Q  48 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||||  ||||||| ||||| | || |||| |||||||||||||||||||    
T  16962985 tagggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaggcagaa 16963046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 21133386 - 21133435
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  21133386 aaatgctattttggtattttagacaatttgtatgtgagacaaaaagttgt 21133435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 34519527 - 34519583
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 233  Q
    ||||||| |||||||||||||||||||| || ||||||||||  |||||||||||||    
T  34519527 ctatttttgtattttagacaacttgtacctgggacaaaaagttgtgttgtggtttgg 34519583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 3892110 - 3892058
Alignment:
Q  171 acaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||| ||||||||||||| |||||||||||||| |  |||||||||||||    
T  3892110 acaaaatgctattttggtattctagacaacttgtacgtaggacaaaaagttgt 3892058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 8054452 - 8054408
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||    
T  8054452 ctattttggtattttaaaaaacttgtacttgagacaaaaagttgt 8054408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 34117461 - 34117528
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||| |||| ||||||||| |||||||||||||||||||||  ||||||| ||||  |||||||||||    
T  34117461 ggacgaaatgctattttggcattttagacaacttgtacatggaacaaaaaattgtgatgtggtttggt 34117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 43214006 - 43213944
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| ||||||||||||||| |||||||||||  || ||||||||||  ||||||||||||||    
T  43214006 aaatgctattttggtatttttgacaacttgtatgtgggacaaaaagttgtgttgtggtttggt 43213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 46408771 - 46408818
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaa 97  Q
    |||||||||||||||  ||||||||||||||| ||||||| |||||||    
T  46408771 gggtgtgtttggtttgcaaaacagcaagtattggatagaacagtacaa 46408818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 48699407 - 48699461
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||| || ||||||||||||||||||||||||||||| ||  ||||| ||||||    
T  48699407 ggacataagtctattttggtattttagacaacttgtacgtggaacaaatagttgt 48699461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 1363650 - 1363699
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||| ||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  1363650 aaatgctatttttgtatttttgacaacctgtacgtgagacaaaaagttgt 1363699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 9913545 - 9913601
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||| ||||| || || ||||||||||  |||||||||||    
T  9913545 tattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttggt 9913601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 9927233 - 9927289
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||| ||||| || || ||||||||||  |||||||||||    
T  9927233 tattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttggt 9927289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 26910486 - 26910430
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttgg 233  Q
    ||||||| ||||||| |||||||||||| || ||||||||||  |||||||||||||    
T  26910486 ctatttttgtatttttgacaacttgtacgtgtgacaaaaagttgtgttgtggtttgg 26910430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 40753043 - 40753104
Alignment:
Q  48 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    |||||||||||||||||  ||||||| ||||| | || |||| |||||||||||| ||||||    
T  40753043 tagggtgtgtttggtttgcaaaacagtaagtactggacagaacagtacaacacaaagcagaa 40753104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 46633570 - 46633619
Alignment:
Q  48 tagggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaa 97  Q
    |||||||||||||||||  ||||||||||||||| || | ||||||||||    
T  46633570 tagggtgtgtttggtttgcaaaacagcaagtattggacataatagtacaa 46633619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 12627 - 12560
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  12627 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 12560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 18145 - 18078
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  18145 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 18078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 15177 - 15244
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  15177 ggacaaaatactattttagtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggt 15244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 101954 - 102021
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  101954 ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggt 102021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 15467 - 15405
Alignment:
Q  174 aaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  15467 aaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtggtttggt 15405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 13670 - 13616
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  13670 ggacaaaatactattttggtattctagacaacttgtacatgtgacaaaaagttgt 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 15587 - 15528
Alignment:
Q  50 gggtgtgtttggtttataaaacagcaagtatttgatagaatagtacaacacaaggcagaa 109  Q
    ||||||||||||||| |||||||| ||||| | || |||| |||||||||||||||||||    
T  15587 gggtgtgtttggtttgtaaaacagtaagtactggacagaacagtacaacacaaggcagaa 15528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 19184 - 19127
Alignment:
Q  166 gaaggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  19184 gaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgt 19127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 2429 - 2362
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||  |||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  2429 ggacaaaaaactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 2362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 2586 - 2540
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaa 215  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  2586 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaa 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 51444 - 51498
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  51444 ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgt 51498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 373055 - 373001
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||||||    
T  373055 ggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaaagttgt 373001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 23591 - 23647
Alignment:
Q  180 tattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    ||||||||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  23591 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggt 23647  T

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Target: scaffold0650 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 1734 - 1667
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagt--tgttgtggtttggt 234  Q
    |||| |||| |||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||||    
T  1734 ggacgaaatgctattttggttttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggt 1667  T

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Target: scaffold0077 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 7548 - 7503
Alignment:
Q  173 aaaattctattttggtattttagacaacttgtacatgagacaaaaa 218  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||    
T  7548 aaaaatctattttggtattttagacaactcgtacgtgagacaaaaa 7503  T

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Target: scaffold0280 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 13768 - 13711
Alignment:
Q  179 ctattttggtattttagacaacttgtacatgagacaaaaagttgt--tgtggtttggt 234  Q
    |||||||||| ||||||||||||||||  || |||||||||||||  |||||||||||    
T  13768 ctattttggtgttttagacaacttgtaagtgggacaaaaagttgtactgtggtttggt 13711  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 33635 - 33581
Alignment:
Q  169 ggacaaaattctattttggtattttagacaacttgtacatgagacaaaaagttgt 223  Q
    ||||||||  |||||||||||||||| |||| |||||| || |||||||||||||    
T  33635 ggacaaaagcctattttggtattttatacaatttgtacgtgggacaaaaagttgt 33581  T

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