View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3272_high_10 (Length: 254)

Name: NF3272_high_10
Description: NF3272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3272_high_10
NF3272_high_10
[»] scaffold0088 (2 HSPs)
scaffold0088 (4-214)||(46914-47126)
scaffold0088 (203-238)||(46855-46890)
[»] chr4 (4 HSPs)
chr4 (72-153)||(11314441-11314522)
chr4 (74-154)||(27918506-27918586)
chr4 (73-141)||(42380866-42380934)
chr4 (74-138)||(42170570-42170634)
[»] chr5 (4 HSPs)
chr5 (73-153)||(40279675-40279755)
chr5 (73-158)||(41954677-41954761)
chr5 (68-153)||(15711128-15711211)
chr5 (79-158)||(14045171-14045250)
[»] chr2 (6 HSPs)
chr2 (73-153)||(11129529-11129609)
chr2 (80-141)||(21425054-21425115)
chr2 (73-154)||(28694479-28694560)
chr2 (76-153)||(43264087-43264162)
chr2 (73-155)||(42063971-42064053)
chr2 (73-121)||(11842010-11842058)
[»] chr3 (5 HSPs)
chr3 (73-158)||(1214866-1214950)
chr3 (73-114)||(43978456-43978497)
chr3 (96-158)||(27039061-27039123)
chr3 (105-158)||(41935957-41936010)
chr3 (90-158)||(25630008-25630076)
[»] chr8 (5 HSPs)
chr8 (70-158)||(33822156-33822244)
chr8 (73-154)||(23052134-23052215)
chr8 (76-154)||(5374500-5374578)
chr8 (73-158)||(33747600-33747687)
chr8 (79-129)||(37288497-37288547)
[»] chr7 (3 HSPs)
chr7 (73-155)||(40343294-40343376)
chr7 (74-156)||(37467224-37467303)
chr7 (106-139)||(22597117-22597150)
[»] chr1 (4 HSPs)
chr1 (73-147)||(9001595-9001669)
chr1 (73-153)||(21937922-21938002)
chr1 (76-136)||(6947947-6948007)
chr1 (105-158)||(4226288-4226341)
[»] chr6 (2 HSPs)
chr6 (62-111)||(8543497-8543546)
chr6 (96-128)||(11213594-11213626)


Alignment Details
Target: scaffold0088 (Bit Score: 161; Significance: 6e-86; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 47126 - 46914
Alignment:
Q  4 tagatattcacagaaatgaaata-ggtaaaagaagaaccaacaattaaattatattctatctgtcccactttatatgtcattctagcaaaatttatttat 102  Q
    |||||||| |||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |    
T  47126 tagatattgacagaaatgaaaaaaggtaaaagaaaaaccaacaattaaattatattccatctgttccactttatatgtcattctagcaaaatttatttgt 47027  T
Q  103 ttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctatgtatgtgtgtttaaatgttttttattgtggctttgcccataaaa 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47026 ttcaaattatatgtcactttacaatatcaaagaatcattcatgtttattttcctatgtatgtgtgtttaaatgttttttattgtggctttgtccgtaaaa 46927  T
Q  203 -tatgtctcttat 214  Q
     ||||||||||||    
T  46926 gtatgtctcttat 46914  T

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Target: scaffold0088; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 46890 - 46855
Alignment:
Q  203 tatgtctcttatatcaaaaaccaacaaatttatttt 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  46890 tatgtctcttatatcaaaaaccaacaaatttatttt 46855  T

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Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 11314522 - 11314441
Alignment:
Q  72 tttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttatttt 153  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||| ||||||||||| |||||||||||    
T  11314522 tttatatgtcattctaccaaaatttatttgtttcaaattatatatcattttacaatatcaaagaatcattaatgtttatttt 11314441  T

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Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 27918586 - 27918506
Alignment:
Q  74 tatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttc 154  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| || |||||||| ||| ||||||||    
T  27918586 tatatgtcattctagcaaaatttgtttctttcaaattatatgtcattttacaatatcaatgaatcattaatgcttattttc 27918506  T

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Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 42380934 - 42380866
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcatt 141  Q
    |||||||| |||||| |||||||| ||| ||||||||| |||||||||||||||||| |||||||||||    
T  42380934 ttatatgtaattctaacaaaatttgtttgtttcaaattctatgtcactttacaatatcaaagaatcatt 42380866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 42170570 - 42170634
Alignment:
Q  74 tatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatc 138  Q
    ||||||||||||||||||||| ||||| || ||| |||||||||| |||||||||| ||||||||    
T  42170570 tatatgtcattctagcaaaatctatttgttccaagttatatgtcattttacaatatcaaagaatc 42170634  T

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Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 40279755 - 40279675
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttatttt 153  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| || |||||||| |||||| ||||    
T  40279755 ttatatgtcattctaacaaaatttgtttatttcaaattatatatcactttacaatattaatgaatcattaatgtttttttt 40279675  T

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Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 41954761 - 41954677
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    ||||||||||||||| ||||||| |||| |  ||||||||||||||||||||||||  || |||||||| | ||||||||||||||    
T  41954761 ttatatgtcattctaccaaaattcatttgtc-caaattatatgtcactttacaataacaaggaatcattgacgtttattttcctat 41954677  T

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Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 15711211 - 15711128
Alignment:
Q  68 ccactttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttatttt 153  Q
    |||||||||| |||||| || |||||||| ||| |  ||||||||||||||||||||||||| ||||||| ||| || ||||||||    
T  15711211 ccactttataagtcattttaacaaaatttgtttgt--caaattatatgtcactttacaatatcaaagaattattaatatttatttt 15711128  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 14045250 - 14045171
Alignment:
Q  79 gtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    |||||||||  ||||||||||| | ||||||||||||||| |||||||||| ||  ||| ||| ||| ||||||| ||||    
T  14045250 gtcattctaataaaatttatttgtctcaaattatatgtcattttacaatatcaataaataattaatgcttatttttctat 14045171  T

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Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 11129529 - 11129609
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttatttt 153  Q
    ||||||||||||||| |||||||| ||| ||  |||||||||||||||||||||||| || |||||||| |||||||||||    
T  11129529 ttatatgtcattctaacaaaatttgtttgttctaaattatatgtcactttacaatatcaaggaatcattaatgtttatttt 11129609  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 21425054 - 21425115
Alignment:
Q  80 tcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcatt 141  Q
    ||||||||||||||||| ||| || ||||||||| ||||||||||||| | |||||||||||    
T  21425054 tcattctagcaaaatttgtttgttccaaattatacgtcactttacaatgtcaaagaatcatt 21425115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 28694560 - 28694479
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttc 154  Q
    |||||||| ||| ||||||||||||||| || ||||||| |||||| |||||||||| ||||||| ||| ||| ||| ||||    
T  28694560 ttatatgttattttagcaaaatttatttgttccaaattacatgtcattttacaatattaaagaattattaatgcttaatttc 28694479  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 43264162 - 43264087
Alignment:
Q  76 tatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttatttt 153  Q
    ||||||||||||||||||||| ||| |  ||||  |||||||| |||||||||| ||||||||||| ||| |||||||    
T  43264162 tatgtcattctagcaaaatttgtttttcccaaa--atatgtcattttacaatatcaaagaatcattaatgcttatttt 43264087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 42063971 - 42064053
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcc 155  Q
    ||||| ||||||||| |||||||| ||||| | |||||||| |||| |||| ||||  || |||||||  |||||||||||||    
T  42063971 ttatacgtcattctatcaaaatttgtttatcttaaattataagtcattttataataccaatgaatcatcaatgtttattttcc 42064053  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 11842010 - 11842058
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactt 121  Q
    |||||||||||| || |||||||| ||| ||||||||||||| ||||||    
T  11842010 ttatatgtcattttaacaaaatttctttgtttcaaattatatttcactt 11842058  T

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Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 1214950 - 1214866
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    ||||||||||||||| ||||||| |||| || ||||||||||||||||||||||||  || |||||||| | ||||||||||||||    
T  1214950 ttatatgtcattctaccaaaattcatttgtt-caaattatatgtcactttacaataacaaggaatcattgacgtttattttcctat 1214866  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 43978497 - 43978456
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatat 114  Q
    |||||||||||| |||||||||||||||||| ||||||||||    
T  43978497 ttatatgtcattttagcaaaatttatttattccaaattatat 43978456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 27039123 - 27039061
Alignment:
Q  96 tatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    ||||||||||||||| |||||||||||||||||  || ||| |||| |||||  |||||||||    
T  27039123 tatttatttcaaattgtatgtcactttacaataccaatgaaacattaatgttacttttcctat 27039061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 41935957 - 41936010
Alignment:
Q  105 caaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    ||||||||||||| ||||||||||  || |||||||| ||||| ||||||||||    
T  41935957 caaattatatgtcgctttacaataccaatgaatcattaatgttaattttcctat 41936010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 25630008 - 25630076
Alignment:
Q  90 aaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    ||||||||||| | | ||||||||||| | |||||||||| ||||||||||| ||  ||||||| ||||    
T  25630008 aaaatttatttgtcttaaattatatgttattttacaatatcaaagaatcattaatacttatttttctat 25630076  T

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Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 33822156 - 33822244
Alignment:
Q  70 actttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |  || ||||||||| || |||||||| |||  |||||||||||    
T  33822156 actttatatgtcattctagcaaaatttatttgttccaaattatacgcgaccttacaatatcaaggaatcattaatgcgtattttcctat 33822244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 23052134 - 23052215
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttc 154  Q
    |||||| |||| | |||||||||| ||| ||| |||||||||||||||||||||||| || |||||||| |||||| |||||    
T  23052134 ttatatatcatccgagcaaaatttgtttgttttaaattatatgtcactttacaatattaaggaatcattaatgttttttttc 23052215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 5374500 - 5374578
Alignment:
Q  76 tatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttc 154  Q
    ||||||||| ||| ||||||| ||| || |||||||||||||| |||||||||| |  |||||||| ||||||||||||    
T  5374500 tatgtcattttagtaaaatttgtttgttccaaattatatgtcattttacaatatcattgaatcattaatgtttattttc 5374578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 33747600 - 33747687
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaat--tatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    |||||| ||||||||||||||||| ||| | ||||||  ||||||||||||| || |||||| |||| ||  |||||| |||||||||    
T  33747600 ttatatatcattctagcaaaatttgtttgtctcaaattatatatgtcacttttcactatgaatgaatgatcaatgtttgttttcctat 33747687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 37288547 - 37288497
Alignment:
Q  79 gtcattctagcaaaatttatttatttcaaattatatgtcactttacaatat 129  Q
    |||||| || |||| ||||||| ||| ||||||||||||||||||||||||    
T  37288547 gtcattttaacaaattttatttgttttaaattatatgtcactttacaatat 37288497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 40343294 - 40343376
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcc 155  Q
    |||||||||||| ||| ||||||| ||||||  ||||||||||||||||||| |||| || |||||||| || ||||||||||    
T  40343294 ttatatgtcattttagtaaaatttgtttattctaaattatatgtcactttacgatatcaaggaatcattaatttttattttcc 40343376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 37467303 - 37467224
Alignment:
Q  74 tatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttattttcct 156  Q
    |||||||||||||| |||||||  ||| || ||||||||  ||||||||| |||||  |||||||||| ||||||||||||||    
T  37467303 tatatgtcattctaacaaaattg-tttgttgcaaattat--gtcactttaaaatatccaagaatcattaatgtttattttcct 37467224  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 22597117 - 22597150
Alignment:
Q  106 aaattatatgtcactttacaatatgaaagaatca 139  Q
    |||||||||||||||||||||||| |||||||||    
T  22597117 aaattatatgtcactttacaatataaaagaatca 22597150  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 9001595 - 9001669
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtt 147  Q
    |||||||||||| || |||||||| ||| ||| |||||||||||||||||||||||| || |||||||| |||||    
T  9001595 ttatatgtcattttaacaaaatttgtttgttttaaattatatgtcactttacaatatcaatgaatcattaatgtt 9001669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 21937922 - 21938002
Alignment:
Q  73 ttatatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaatcattcatgtttatttt 153  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||| |||| ||||| || |||||||| ||| |||||||    
T  21937922 ttatatgtcattctaacaaaatttatttgcctcaaattatatgtcattttataatatcaatgaatcattgatgcttatttt 21938002  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 6948007 - 6947947
Alignment:
Q  76 tatgtcattctagcaaaatttatttatttcaaattatatgtcactttacaatatgaaagaa 136  Q
    |||||||||||  |||||| ||||| | ||||||||||||||| |||||||||| ||||||    
T  6948007 tatgtcattctgacaaaatatatttgtatcaaattatatgtcaatttacaatatcaaagaa 6947947  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 4226288 - 4226341
Alignment:
Q  105 caaattatatgtcactttacaatatgaaagaatcattcatgtttattttcctat 158  Q
    ||||||||||||||||||||||||| || ||| |||| |||||  |||||||||    
T  4226288 caaattatatgtcactttacaatatcaatgaaacattaatgttacttttcctat 4226341  T

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Target: chr6 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 8543497 - 8543546
Alignment:
Q  62 tctgtcccactttatatgtcattctagcaaaatttatttatttcaaatta 111  Q
    ||||| ||||||||||||||||| ||||||||||| ||| || |||||||    
T  8543497 tctgttccactttatatgtcattttagcaaaatttgtttgttccaaatta 8543546  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 11213626 - 11213594
Alignment:
Q  96 tatttatttcaaattatatgtcactttacaata 128  Q
    |||||||||||||||||||||| ||||||||||    
T  11213626 tatttatttcaaattatatgtcgctttacaata 11213594  T

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