View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3272_low_4 (Length: 529)
Name: NF3272_low_4
Description: NF3272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3272_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 18 - 513
Target Start/End: Complemental strand, 45616800 - 45616305
Alignment:
| Q |
18 |
gataactgttttccatgttcataattttgttcacaatatcattgtagattcttacaattctagttgaaaagagcattgtagagaaaaacttcctagaacg |
117 |
Q |
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| T |
45616800 |
gataactgttttccatgttcataattttgttcacaatatcattgtagattcttacaattctagttgaatagagcattgtagagaaaaacttcctagaacg |
45616701 |
T |
|
| Q |
118 |
tgataaccttagaccacgtagttttccattcaaagacttcacccaaatgcaacgttttcctactctcatcatccttttacttgttaacttttcatagcca |
217 |
Q |
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| T |
45616700 |
tgataaccttagaccacgtagttttccattcaaagacttcacccaaatgcaacgttttcctactctcatcatccttttacttgttaacttttcatagcca |
45616601 |
T |
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| Q |
218 |
aatctcatgcgtttgctagccaaatactgcaaactcatttgcaacatggtactgacagtgttaattagtggttttaatgaacaagcaagagctgaattaa |
317 |
Q |
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| T |
45616600 |
aatctcatgcgtttggtagccaaatactgcaaactcatttgcaacatggtactgacagtgttaattagtgg-tttaatgaacaagcaagagctgaattaa |
45616502 |
T |
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| Q |
318 |
acatcttatatagcacattgttgccaccatgttccaatgagtagagacaaaattacatcattttaaaacatgaaaacacatggttataaatcaatcacgt |
417 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
45616501 |
acatcttatataacacattgttgccaccatgttccaatgagtagagacaaaattacatcatttt-aaacatgaaaacacatggttataaatcaatcacgt |
45616403 |
T |
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| Q |
418 |
tgtatattcagagtctataacttgttcggttattcttagaaatccaaattaat--tagttggtgggtaaaggaatatttgatgcatgtgcaatgattg |
513 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45616402 |
tgtatattcagagtctataacttgttctgttattcttagaaatccaaattaattatagttggtgggtaaaggaatatttgatgcatgtgcaatgattg |
45616305 |
T |
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