View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3273_low_1 (Length: 772)

Name: NF3273_low_1
Description: NF3273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3273_low_1
NF3273_low_1
[»] chr4 (39 HSPs)
chr4 (299-753)||(13620125-13620596)
chr4 (143-300)||(13620890-13621047)
chr4 (85-143)||(599302-599360)
chr4 (82-135)||(47688477-47688530)
chr4 (82-134)||(8248518-8248570)
chr4 (82-134)||(8266183-8266235)
chr4 (89-135)||(42882686-42882732)
chr4 (82-134)||(20774178-20774230)
chr4 (83-135)||(26147031-26147083)
chr4 (82-134)||(30573707-30573759)
chr4 (82-134)||(53147874-53147926)
chr4 (82-134)||(53732438-53732490)
chr4 (88-136)||(55000688-55000736)
chr4 (88-143)||(5046486-5046541)
chr4 (82-133)||(16903641-16903692)
chr4 (83-134)||(24374792-24374843)
chr4 (83-134)||(47785798-47785849)
chr4 (88-143)||(55976959-55977014)
chr4 (64-134)||(7841547-7841617)
chr4 (90-135)||(2444374-2444419)
chr4 (90-135)||(53772809-53772854)
chr4 (83-135)||(1866345-1866397)
chr4 (88-136)||(24551927-24551975)
chr4 (82-134)||(56262481-56262533)
chr4 (64-115)||(5046006-5046057)
chr4 (83-134)||(9365172-9365223)
chr4 (83-134)||(19080388-19080439)
chr4 (64-135)||(47687911-47687982)
chr4 (89-132)||(52871303-52871346)
chr4 (88-135)||(53773590-53773637)
chr4 (88-131)||(55976172-55976215)
chr4 (64-134)||(8247699-8247769)
chr4 (82-136)||(26159619-26159673)
chr4 (89-135)||(32089618-32089664)
chr4 (82-132)||(55001438-55001488)
chr4 (86-135)||(2446163-2446212)
chr4 (89-134)||(3654520-3654565)
chr4 (64-133)||(8265365-8265434)
chr4 (89-134)||(31329722-31329767)
[»] chr1 (36 HSPs)
chr1 (10-135)||(10121477-10121603)
chr1 (82-134)||(34309228-34309280)
chr1 (85-136)||(4433848-4433899)
chr1 (89-135)||(10120784-10120830)
chr1 (86-135)||(49680812-49680861)
chr1 (83-135)||(13262834-13262886)
chr1 (82-134)||(13263514-13263566)
chr1 (82-134)||(25469084-25469136)
chr1 (82-134)||(30663360-30663412)
chr1 (82-134)||(30663974-30664026)
chr1 (85-136)||(4439207-4439258)
chr1 (83-134)||(30932794-30932845)
chr1 (86-136)||(7558449-7558499)
chr1 (38-135)||(32038478-32038576)
chr1 (82-135)||(168891-168944)
chr1 (93-134)||(26118675-26118716)
chr1 (83-135)||(169626-169678)
chr1 (86-134)||(7559201-7559249)
chr1 (82-134)||(25468512-25468564)
chr1 (82-134)||(27256710-27256762)
chr1 (82-134)||(28181535-28181587)
chr1 (82-134)||(34308475-34308527)
chr1 (83-134)||(7406247-7406298)
chr1 (83-134)||(8987792-8987843)
chr1 (89-136)||(17172667-17172714)
chr1 (89-136)||(24991970-24992017)
chr1 (83-134)||(46909361-46909412)
chr1 (83-134)||(49681672-49681723)
chr1 (82-132)||(8988546-8988596)
chr1 (90-136)||(17171931-17171977)
chr1 (82-128)||(46812185-46812231)
chr1 (88-134)||(47967864-47967910)
chr1 (85-134)||(11548802-11548851)
chr1 (86-135)||(11704810-11704859)
chr1 (89-134)||(19172580-19172625)
chr1 (82-143)||(27789888-27789949)
[»] chr5 (29 HSPs)
chr5 (10-136)||(38056794-38056921)
chr5 (10-101)||(18676819-18676911)
chr5 (83-134)||(6476789-6476840)
chr5 (84-134)||(29046031-29046081)
chr5 (89-135)||(38057599-38057645)
chr5 (82-135)||(235593-235646)
chr5 (88-136)||(7632095-7632143)
chr5 (82-134)||(19128772-19128824)
chr5 (82-134)||(28705876-28705928)
chr5 (83-134)||(27364485-27364536)
chr5 (83-133)||(10554550-10554600)
chr5 (82-135)||(236926-236979)
chr5 (83-136)||(1554081-1554134)
chr5 (82-135)||(17071225-17071278)
chr5 (82-135)||(34600262-34600315)
chr5 (90-134)||(234703-234747)
chr5 (90-134)||(237826-237870)
chr5 (88-136)||(1281836-1281884)
chr5 (90-134)||(19359706-19359750)
chr5 (89-133)||(25858213-25858257)
chr5 (83-131)||(28705170-28705218)
chr5 (86-134)||(29087927-29087975)
chr5 (88-143)||(2313940-2313995)
chr5 (83-134)||(4084882-4084933)
chr5 (64-135)||(17071773-17071844)
chr5 (698-752)||(1480796-1480850)
chr5 (88-133)||(1283503-1283548)
chr5 (93-134)||(1283533-1283574)
chr5 (93-134)||(10554524-10554565)
[»] chr2 (27 HSPs)
chr2 (15-132)||(23856640-23856757)
chr2 (83-135)||(1297121-1297173)
chr2 (83-135)||(9275588-9275640)
chr2 (83-134)||(29719449-29719500)
chr2 (82-135)||(11750259-11750312)
chr2 (83-135)||(12725613-12725665)
chr2 (83-143)||(15774196-15774256)
chr2 (83-143)||(22301868-22301928)
chr2 (82-134)||(22560565-22560617)
chr2 (83-134)||(1296382-1296433)
chr2 (83-134)||(9276328-9276379)
chr2 (88-143)||(9541037-9541092)
chr2 (89-136)||(27178649-27178696)
chr2 (84-134)||(23343782-23343832)
chr2 (89-135)||(23857028-23857074)
chr2 (82-135)||(18174667-18174720)
chr2 (82-135)||(42182612-42182665)
chr2 (82-134)||(8542545-8542597)
chr2 (88-136)||(29513150-29513198)
chr2 (83-134)||(9540334-9540385)
chr2 (64-135)||(18174101-18174172)
chr2 (83-134)||(19918720-19918771)
chr2 (83-134)||(36237634-36237685)
chr2 (88-134)||(15902885-15902931)
chr2 (90-136)||(27177913-27177959)
chr2 (85-135)||(29559420-29559470)
chr2 (89-134)||(34812860-34812905)
[»] chr8 (14 HSPs)
chr8 (10-108)||(3290743-3290841)
chr8 (83-135)||(38576300-38576352)
chr8 (38-135)||(31602018-31602116)
chr8 (82-134)||(31642084-31642136)
chr8 (86-134)||(41974643-41974691)
chr8 (88-138)||(28929844-28929894)
chr8 (83-135)||(37025008-37025059)
chr8 (83-134)||(8996972-8997023)
chr8 (88-134)||(3165125-3165171)
chr8 (89-135)||(14825645-14825691)
chr8 (82-132)||(26654375-26654425)
chr8 (88-134)||(32414527-32414573)
chr8 (82-135)||(11686961-11687014)
chr8 (83-136)||(27441467-27441520)
[»] chr3 (22 HSPs)
chr3 (88-143)||(17603162-17603217)
chr3 (88-143)||(11654033-11654088)
chr3 (83-134)||(46150728-46150779)
chr3 (83-136)||(31974652-31974705)
chr3 (82-134)||(48648206-48648258)
chr3 (85-132)||(265099-265146)
chr3 (88-134)||(21727533-21727579)
chr3 (89-135)||(54458670-54458716)
chr3 (82-131)||(981673-981722)
chr3 (86-134)||(14871156-14871204)
chr3 (85-133)||(31115600-31115648)
chr3 (82-134)||(41458036-41458088)
chr3 (82-134)||(48507030-48507082)
chr3 (83-134)||(37520560-37520611)
chr3 (83-134)||(45081402-45081453)
chr3 (85-135)||(264468-264518)
chr3 (38-143)||(13349409-13349515)
chr3 (82-128)||(17605715-17605761)
chr3 (82-128)||(51826546-51826592)
chr3 (82-115)||(29856681-29856714)
chr3 (82-115)||(44699883-44699916)
chr3 (82-127)||(48413329-48413374)
[»] chr7 (44 HSPs)
chr7 (82-143)||(3029196-3029257)
chr7 (82-143)||(19067630-19067691)
chr7 (83-135)||(25342498-25342550)
chr7 (83-135)||(25343304-25343356)
chr7 (82-134)||(26636105-26636157)
chr7 (82-134)||(26636858-26636910)
chr7 (82-134)||(30661453-30661505)
chr7 (82-134)||(37949607-37949659)
chr7 (83-134)||(7668484-7668535)
chr7 (701-752)||(10482331-10482382)
chr7 (89-136)||(31278159-31278206)
chr7 (83-134)||(46428189-46428240)
chr7 (85-135)||(24719336-24719386)
chr7 (64-134)||(25599024-25599094)
chr7 (82-136)||(42421048-42421102)
chr7 (82-135)||(3772524-3772577)
chr7 (83-136)||(24389615-24389668)
chr7 (86-135)||(30660594-30660643)
chr7 (86-135)||(37950469-37950518)
chr7 (83-135)||(27948447-27948499)
chr7 (88-143)||(43065120-43065175)
chr7 (88-134)||(3688386-3688432)
chr7 (88-134)||(13785597-13785643)
chr7 (86-136)||(14686131-14686181)
chr7 (64-134)||(21496963-21497033)
chr7 (83-136)||(1417608-1417661)
chr7 (83-136)||(38225974-38226027)
chr7 (82-135)||(40273561-40273614)
chr7 (88-136)||(14305090-14305138)
chr7 (83-135)||(16664124-16664176)
chr7 (83-135)||(17638484-17638536)
chr7 (82-134)||(19068393-19068445)
chr7 (90-134)||(45099899-45099943)
chr7 (88-136)||(47719708-47719756)
chr7 (83-134)||(18977768-18977819)
chr7 (83-134)||(25343238-25343289)
chr7 (84-135)||(45161970-45162021)
chr7 (85-135)||(45931218-45931268)
chr7 (89-134)||(3689276-3689321)
chr7 (85-134)||(3903340-3903389)
chr7 (83-116)||(23889866-23889899)
chr7 (83-116)||(23902061-23902094)
chr7 (88-133)||(24453730-24453775)
chr7 (90-135)||(37395505-37395550)
[»] chr6 (16 HSPs)
chr6 (82-134)||(10171278-10171330)
chr6 (82-134)||(26529510-26529562)
chr6 (82-143)||(505897-505959)
chr6 (88-134)||(33436277-33436323)
chr6 (82-135)||(8488470-8488523)
chr6 (82-135)||(10171963-10172016)
chr6 (82-135)||(26528824-26528877)
chr6 (64-135)||(3623726-3623797)
chr6 (83-134)||(19323765-19323816)
chr6 (84-134)||(19311003-19311053)
chr6 (83-131)||(11434455-11434503)
chr6 (83-134)||(18227734-18227784)
chr6 (86-129)||(19322990-19323033)
chr6 (88-134)||(19311830-19311876)
chr6 (82-135)||(3623176-3623229)
chr6 (82-135)||(12344895-12344948)
[»] scaffold0093 (1 HSPs)
scaffold0093 (82-135)||(23726-23779)
[»] scaffold0176 (1 HSPs)
scaffold0176 (83-134)||(26594-26645)
[»] scaffold1207 (1 HSPs)
scaffold1207 (82-143)||(1580-1641)
[»] scaffold1213 (1 HSPs)
scaffold1213 (84-132)||(1900-1948)
[»] scaffold0504 (1 HSPs)
scaffold0504 (90-134)||(5385-5429)
[»] scaffold0085 (1 HSPs)
scaffold0085 (90-134)||(22076-22120)
[»] scaffold2007 (1 HSPs)
scaffold2007 (85-134)||(753-802)
[»] scaffold0096 (1 HSPs)
scaffold0096 (90-131)||(39901-39942)
[»] scaffold0086 (1 HSPs)
scaffold0086 (82-135)||(8289-8342)


Alignment Details
Target: chr4 (Bit Score: 321; Significance: 0; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 299 - 753
Target Start/End: Complemental strand, 13620596 - 13620125
Alignment:
Q  299 tattaaacaacttttaatattaaatgaagaagaccttaatccaaatgcatgcaagtagtgtggttgcttaatataaacaaatacaaattgaggaaaccag 398  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  13620596 tattaaacaacttttaatattaaatgaagaagacct-aatccaaatgcatgcaagtagtgtggttgcttaatataaacaaaaacaaattgaggaaactag 13620498  T
Q  399 aatttgacttggataagacaaagaccaaaatgttttgaccgtatgaaaaaggttaaagttataaactttataaatacaaactttatagaga--------- 489  Q
    || ||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |             
T  13620497 aagttgacgtggataagacaaagaccagaatgttttgactgaatgaaaaaggttaaagttataaactttataaatacaaactttatagacaatcttgttt 13620398  T
Q  490 ---------gaagcagaacactcatcttgactgagaaaaagcatacaaaatggtttcatttcttgannnnnnnctttcacctactcttgccaccaaagta 580  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||    
T  13620397 caatacacagaagcagaacactcatcttgactgagaaaaagcatacaaaatggtttcatttcttgatttttttctttcaccaactcttgccaccaaagta 13620298  T
Q  581 agacgattggtttcgaggacagataaacctaaccctaagcctcagccatctaagtcttgtaagttttaaaccttttaattcttccacttcaatagaattt 680  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  13620297 agacgattggtttcgaggactgataaacctaaccctaagcctcagccatccaagtctcgtaagttttaaaccttttaaatcttccactttaatagaattt 13620198  T
Q  681 atacttcaattatatacatgcagatattagtttaaactttcatatatgatggtcgaacttgtttgtgtgtatc 753  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  13620197 atacttcaattatatacatgcagatattagtttgaactttcatatatgatggtcgaactcgtttgtgtgtatc 13620125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 13621047 - 13620890
Alignment:
Q  143 acttgccattaaaaagataaattttaagagagagtagtgtatgaaaaggtgttcgaaactataattgtatcactaattttgtcgccaccctccaaacatg 242  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13621047 acttgccattagaaagaaaatttttaagagagagtagtgtatgaaaaagtgttcgaaactataattgtatcactaattttgtcgccaccctccaaacatg 13620948  T
Q  243 cttaaaaaattgtaaataannnnnnngaaacattgaaaaacattagttaaatttgtta 300  Q
    |||||||||||||||||||       |||||||||||||| |||||||||||||||||    
T  13620947 cttaaaaaattgtaaataatttttttgaaacattgaaaaatattagttaaatttgtta 13620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 599302 - 599360
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||    
T  599302 ttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctatatatata 599360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 47688477 - 47688530
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  47688477 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 47688530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 8248518 - 8248570
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  8248518 cggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 8248570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 8266183 - 8266235
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  8266183 cggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 8266235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 42882686 - 42882732
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  42882686 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatccta 42882732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 20774178 - 20774230
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| |||||||    
T  20774178 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 20774230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 26147031 - 26147083
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  26147031 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 26147083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 30573707 - 30573759
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| |||||||    
T  30573707 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 30573759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 53147926 - 53147874
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||    
T  53147926 cggttgggatttggtgtcaacgaatccgttgacatctggtgtcaatggatcct 53147874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 53732490 - 53732438
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||| |||||||| |||||||||||| || |||||||||||||||    
T  53732490 cggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcct 53732438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 55000736 - 55000688
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  55000736 agatttggtgtcaacgaatccgttgacatctggtgtcaatggatcctat 55000688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 5046486 - 5046541
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||| |||| ||||| | || ||||||||||||||||||||||||    
T  5046486 agatttggtgtcaacgaatctgttgatacctggtgtcaacggatcctatatatata 5046541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 16903641 - 16903692
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcc 133  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||| ||||    
T  16903641 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 16903692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 24374843 - 24374792
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||||||| || |||||||||||||||    
T  24374843 ggttgagatttggtgtcaacgaattcgttgacagctggtgtcaacggatcct 24374792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 47785798 - 47785849
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||||||||||| || |||||||| ||||||    
T  47785798 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacagatcct 47785849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 55976959 - 55977014
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||| |||||||||||| || ||||| | ||||||||||||||||    
T  55976959 agatttggtgtcaacgaatccgttgacacctggtgtcgatggatcctatatatata 55977014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 7841617 - 7841547
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||| || |||| ||| ||||||||||||||||| |||||||| ||| ||  ||||||||||||||    
T  7841617 ttgattaaataaaatatacggatgagatttggtgtcaacgaatccgttaacacctgatgtcaacggatcct 7841547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 2444419 - 2444374
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 2444374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 53772854 - 53772809
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||    
T  53772854 atttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 53772809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 1866397 - 1866345
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| ||| | |||||| || ||||||||||||||||    
T  1866397 ggttgagatttggtgtcaacgaattcattgacacctagtgtcaacggatccta 1866345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 24551927 - 24551975
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||||    
T  24551927 agatttggtgtcaacaaatccgttgacacctggtgtcaatggatcctat 24551975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 56262533 - 56262481
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| ||| | |||||| || |||||||||||||||    
T  56262533 cggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 56262481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 5046057 - 5046006
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgaca 115  Q
    ||||||||| || |||  ||||||||||||||||||||| ||||||||||||    
T  5046057 ttgattaaataaaataaacggttgagatttggtgtcaacgaatccgttgaca 5046006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 9365223 - 9365172
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||||||| || |||| ||||||||||    
T  9365223 ggttgagatttggtgtcaacaaattcgttgacacctggtgttaacggatcct 9365172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 19080439 - 19080388
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||| ||||||||||||| |||||||||||| || |||||||| ||||||    
T  19080439 ggttgaaatttggtgtcaacgaatccgttgacacctggtgtcaacagatcct 19080388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 47687982 - 47687911
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||| || |||  |||||| |||||||||||||| ||| |||| ||| || ||||||||||||||||    
T  47687982 ttgattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatccta 47687911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 52871346 - 52871303
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatc 132  Q
    |||||||||||||| |||||||||||| || |||||||||||||    
T  52871346 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 52871303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 53773590 - 53773637
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||| |||||||||||| ||  |||||||||||||||    
T  53773590 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatccta 53773637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 55976215 - 55976172
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggat 131  Q
    ||||||||||||||| |||||||||||| || ||||||||||||    
T  55976215 agatttggtgtcaacgaatccgttgacacctggtgtcaacggat 55976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 8247769 - 8247699
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||| || |||  ||||| |||||| |||||||| |||||||||||| |  |||||||||||||||    
T  8247769 ttgattaaataaaatagacggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcct 8247699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 26159619 - 26159673
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||||| |||||||||||||| ||||||||||||  |  ||||||||||||||||    
T  26159619 cggttgcgatttggtgtcaacgaatccgttgacacttgatgtcaacggatcctat 26159673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 32089618 - 32089664
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||| ||||| ||| ||||||||||| ||||||||||||||||    
T  32089618 gatttggtatcaacgaattcgttgacatctggtgtcaacggatccta 32089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 55001438 - 55001488
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatc 132  Q
    ||||| |||||| |||||||| |||||||||||| || |||||||||||||    
T  55001438 cggttaagatttagtgtcaacgaatccgttgacacctggtgtcaacggatc 55001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 2446163 - 2446212
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||| ||| |||| ||||||| || ||||||||||||||||    
T  2446163 tgagatttggtgttaacgaatctgttgacacctggtgtcaacggatccta 2446212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 3654520 - 3654565
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||| |||||||||||| || | |||||||||||||    
T  3654520 gatttggtgtcaacgaatccgttgacacctggcgtcaacggatcct 3654565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 8265434 - 8265365
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcc 133  Q
    ||||||||| || |||  ||||| |||||| |||||||| |||||||||||| |  ||||||||||||||    
T  8265434 ttgattaaataaaatagacggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcc 8265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 31329722 - 31329767
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||| ||| |||||||||||| || |||||||||||||||    
T  31329722 gatttggtgttaacgaatccgttgacacctggtgtcaacggatcct 31329767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 3e-41; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 10121477 - 10121603
Alignment:
Q  10 ggagcagagagtgaaaggttcacctcagttaattta-acaaataattaaggatccttgattaaacaagatattcggttgagatttggtgtcaaccaatcc 108  Q
    ||||||||||| ||||||||||| | |||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  10121477 ggagcagagagagaaaggttcacatgagttaattttgacaaataattaaggacccttgattaaacaagatatgcggttgagatttggtgtcaaccaatcc 10121576  T
Q  109 gttgacatctcgtgtcaacggatccta 135  Q
    ||||||| || ||||||||||||||||    
T  10121577 gttgacacctggtgtcaacggatccta 10121603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 34309228 - 34309280
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  34309228 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 34309280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 4433848 - 4433899
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||    
T  4433848 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctat 4433899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 10120830 - 10120784
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||    
T  10120830 gatttggtgtcaaccaatccgttgacacctggtgtcaacggatccta 10120784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 49680861 - 49680812
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  49680861 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 49680812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 13262886 - 13262834
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  13262886 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 13262834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 13263514 - 13263566
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| ||||| |||||| || |||||||||||||||    
T  13263514 cggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcct 13263566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 25469084 - 25469136
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||||||||    
T  25469084 cggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25469136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 30663412 - 30663360
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||| | || |||||||||||||||    
T  30663412 cggttgagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcct 30663360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 30663974 - 30664026
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| |  |||||||||||||||    
T  30663974 cggttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 30664026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 4439207 - 4439258
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||||||||||||||||| |||||||||||| |  |||||||||||||||||    
T  4439207 ttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctat 4439258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 30932794 - 30932845
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||| |||||||||||| || |||||||||||||||    
T  30932794 ggttgagatttggtgccaacgaatccgttgacacctggtgtcaacggatcct 30932845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 7558499 - 7558449
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  7558499 tgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatcctat 7558449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 32038576 - 32038478
Alignment:
Q  38 ttaatttaacaaataattaaggatccttga-ttaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||| |||||||||||||| ||||| |||| ||||| ||  ||  ||||||||||||||||||||| ||| |||||||| || || ||||| |||||||    
T  32038576 ttaacttaacaaataattatggatcattgaattaaataaattagacggttgagatttggtgtcaacgaattcgttgacacctggtatcaaccgatccta 32038478  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 168944 - 168891
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||  |||||| ||||| || ||||||||||||||||    
T  168944 cggttgagatttggtgtcaatgaatccgctgacacctggtgtcaacggatccta 168891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 26118716 - 26118675
Alignment:
Q  93 tggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  26118716 tggtgtcaacaaatccgttgacatctggtgtcaacggatcct 26118675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 169626 - 169678
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||  ||| |||||||| || ||||||||||||||||    
T  169626 ggttgagatttggtgtcaataaattcgttgacacctggtgtcaacggatccta 169678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 7559201 - 7559249
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||  ||||||||||| || |||||||||||||||    
T  7559201 tgagatttggtgtcaacggatccgttgacacctggtgtcaacggatcct 7559249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 25468564 - 25468512
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||  |||||||||||| || ||||||| |||||||    
T  25468564 cggttgagatttggtgtcaatgaatccgttgacacctggtgtcaatggatcct 25468512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 27256710 - 27256762
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||| ||||||||||||| ||| |||||||| || |||||||||||||||    
T  27256710 cggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 27256762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 28181587 - 28181535
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| ||| |||||||| |  |||||||||||||||    
T  28181587 cggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcct 28181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 34308527 - 34308475
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||| ||||||||||||| ||| |||||||| || |||||||||||||||    
T  34308527 cggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 34308475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 7406298 - 7406247
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||| ||| || |||||||||||||||    
T  7406298 ggttgagatttggtgtcaacgaattcgttaacacctggtgtcaacggatcct 7406247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 8987843 - 8987792
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||||||||||| ||  ||||||| ||||||    
T  8987843 ggttgagatttggtgtcaacgaatccgttgacacctgatgtcaaccgatcct 8987792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 17172667 - 17172714
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||| |||||| |||||||||||| || |||||||||||||||||    
T  17172667 gatttggcgtcaacgaatccgttgacacctggtgtcaacggatcctat 17172714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 24992017 - 24991970
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||||||||||||| |||||||||||| || ||||||| |||||||||    
T  24992017 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctat 24991970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 46909361 - 46909412
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| |||||||||||||  |||| |||||||||| |||||||||||||||    
T  46909361 ggttgtgatttggtgtcaatgaatctgttgacatctggtgtcaacggatcct 46909412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 49681672 - 49681723
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||  || |||||| |||| |||||||||||||||    
T  49681672 ggttgagatttggtgtcaacggattcgttgatatctggtgtcaacggatcct 49681723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 8988546 - 8988596
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatc 132  Q
    ||||||||||||||||||||  |||||||||||| || |||||| ||||||    
T  8988546 cggttgagatttggtgtcaaggaatccgttgacacctggtgtcagcggatc 8988596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 17171977 - 17171931
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||| ||| |||||||| || |||||||||||||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctat 17171931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 46812185 - 46812231
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacg 128  Q
    ||||||||||||||||||||| |||||||||||| || |||| ||||    
T  46812185 cggttgagatttggtgtcaacgaatccgttgacacctggtgttaacg 46812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 47967910 - 47967864
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||    
T  47967910 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 47967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 11548851 - 11548802
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||| |||||||| |||| ||||||| || |||||||||||||||    
T  11548851 ttgagatttagtgtcaacgaatctgttgacacctggtgtcaacggatcct 11548802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 11704810 - 11704859
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||| ||||||||||||  | ||||||| ||||||||    
T  11704810 tgagatttggtgtcaacgaatccgttgacacttggtgtcaatggatccta 11704859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 19172580 - 19172625
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||| |||||||||||| || ||||||| |||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 19172625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 27789949 - 27789888
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||| ||||||| |||| ||| ||| || |||||||| |||| ||||||||||    
T  27789949 cggttgagatttgatgtcaacgaatcggttaacacctggtgtcaacagatcatatatatata 27789888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 4e-37; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 38056921 - 38056794
Alignment:
Q  10 ggagcagagagtgaaaggttcacctcagttaattta-acaaataattaaggatccttgattaaacaagatattcggttgagatttggtgtcaaccaatcc 108  Q
    ||||||||||| ||||||||||| | |||||||||  ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  38056921 ggagcagagagagaaaggttcacatgagttaattttgacaaataattaaggacccttgattaaacaagatatgcggttgaaatttggtgtcaaccaatcc 38056822  T
Q  109 gttgacatctcgtgtcaacggatcctat 136  Q
    ||||||| || |||||||| ||||||||    
T  38056821 gttgacacctggtgtcaacagatcctat 38056794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 18676819 - 18676911
Alignment:
Q  10 ggagcagagagtgaaaggttcacctcagttaatttaacaaataattaaggatccttgattaaa-caagatattcggttgagatttggtgtcaa 101  Q
    |||| |||||| ||||||||||| | ||||||||||| ||||||||||||||||||||||||| ||| | |  | ||||||||||||||||||    
T  18676819 ggagtagagagagaaaggttcacatgagttaatttaaaaaataattaaggatccttgattaaaacaaaacagaccgttgagatttggtgtcaa 18676911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 6476789 - 6476840
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  6476789 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 6476840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 29046081 - 29046031
Alignment:
Q  84 gttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  29046081 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 29046031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 38057599 - 38057645
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||    
T  38057599 gatttggtgtcaaccaatccgttgacacctagtgtcaacggatccta 38057645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 235646 - 235593
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| ||||||||    
T  235646 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatccta 235593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 7632143 - 7632095
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||    
T  7632143 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctat 7632095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 19128824 - 19128772
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||||||||    
T  19128824 cggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 19128772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 28705876 - 28705928
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||| |||||||| |||||||||||| || |||||||||||||||    
T  28705876 cggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcct 28705928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 27364485 - 27364536
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||||| |||||| || |||||||||||||||    
T  27364485 ggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcct 27364536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 10554600 - 10554550
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcc 133  Q
    |||||||||||||||||||| |||||||||||| || ||||||||| ||||    
T  10554600 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 10554550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 236926 - 236979
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||| || |||||||||||| || ||||||| ||||||||    
T  236926 cggttgagatttggtgtctacgaatccgttgacacctggtgtcaatggatccta 236979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 1554081 - 1554134
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||| ||||||||||||||| ||| |||||||| || |||||||||||||||||    
T  1554081 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctat 1554134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 17071278 - 17071225
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||| |||||||| ||  |||||||||||||||    
T  17071278 cggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatccta 17071225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 34600315 - 34600262
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||| |||||||| ||  |||||||||||||||    
T  34600315 cggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatccta 34600262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 234747 - 234703
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||| |||||||||||| || |||||||||||||||    
T  234747 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 234703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 237826 - 237870
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||| |||||||||||| || |||||||||||||||    
T  237826 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 237870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 1281884 - 1281836
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||||    
T  1281884 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctat 1281836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 19359750 - 19359706
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||| |||||||||||| || |||||||||||||||    
T  19359750 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 19359706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 25858257 - 25858213
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcc 133  Q
    |||||||||||||| |||||||||||| || ||||||||||||||    
T  25858257 gatttggtgtcaacgaatccgttgacacctagtgtcaacggatcc 25858213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 28705218 - 28705170
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggat 131  Q
    |||||||||||||||| ||| |||||||||||| || ||||||||||||    
T  28705218 ggttgagatttggtgtaaacgaatccgttgacacctggtgtcaacggat 28705170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 29087975 - 29087927
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||  |||||||||||| || |||||||||||||||    
T  29087975 tgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcct 29087927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 2313995 - 2313940
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||  |||| ||||||| || ||||||| ||||||||||||||||    
T  2313995 agatttggtgtcaatgaatctgttgacacctggtgtcaatggatcctatatatata 2313940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 4084933 - 4084882
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||||||| |  |||||||||||||||    
T  4084933 ggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcct 4084882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 17071773 - 17071844
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||| || |||  |||||| |||||||||||||| ||| |||| ||| || ||||||||||||||||    
T  17071773 ttgattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatccta 17071844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 752
Target Start/End: Complemental strand, 1480850 - 1480796
Alignment:
Q  698 atgcagatattagtttaaactttcatatatgatggtcgaacttgtttgtgtgtat 752  Q
    ||||||||||| |||| ||||||||||| || |||||||||  ||||||||||||    
T  1480850 atgcagatattggtttgaactttcatatgtgttggtcgaacccgtttgtgtgtat 1480796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 1283503 - 1283548
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcc 133  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||||    
T  1283503 agatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 1283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 1283533 - 1283574
Alignment:
Q  93 tggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||| |||||||||||| || |||||||||||||||    
T  1283533 tggtgtcaacgaatccgttgacacctggtgtcaacggatcct 1283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 10554565 - 10554524
Alignment:
Q  93 tggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||| |||||||||||| || |||||||||||||||    
T  10554565 tggtgtcaacgaatccgttgacacctggtgtcaacggatcct 10554524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 23856757 - 23856640
Alignment:
Q  15 agagagtgaaaggttcacctcagttaatttaacaaataattaaggatccttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgac 114  Q
    |||||| ||||||||||| | ||||||||||||||||||||||| |  |||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  23856757 agagagagaaaggttcacatgagttaatttaacaaataattaagaactcttgattaaacaggatatgcggttgagatttggtgtcaatcaatccgttgac 23856658  T
Q  115 atctcgtgtcaacggatc 132  Q
    | |  |||||||||||||    
T  23856657 accaggtgtcaacggatc 23856640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 1297121 - 1297173
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  1297121 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 1297173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 9275640 - 9275588
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  9275640 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 9275588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 29719500 - 29719449
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  29719500 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 29719449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 11750312 - 11750259
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| ||||||||    
T  11750312 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatccta 11750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 12725613 - 12725665
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||| |||||||||||||| |||||||||||| || ||||||||||||||||    
T  12725613 ggttgggatttggtgtcaacaaatccgttgacacctggtgtcaacggatccta 12725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 15774256 - 15774196
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    |||||||||||||||||||| ||| |||||||| |  ||||||||||||||||| ||||||    
T  15774256 ggttgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcctatctatata 15774196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 22301868 - 22301928
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    |||| ||||||||||||||| ||| |||||||| || ||||||||||||||||| ||||||    
T  22301868 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctatata 22301928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 22560565 - 22560617
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| ||  ||||||||||||||    
T  22560565 cggttgagatttggtgtcaacgaatccgttgacacctgatgtcaacggatcct 22560617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 1296433 - 1296382
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||||||| || |||||||||||||||    
T  1296433 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 1296382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 9276328 - 9276379
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||||||| || |||||||||||||||    
T  9276328 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 9276379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 9541037 - 9541092
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||| | ||||||    
T  9541037 agatttggtgtcaacgaattcgttgacatctcgtgccaacggatcctgtctatata 9541092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 27178649 - 27178696
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||    
T  27178649 gatttggtgtcaaacaatccgttgacacctggtgtcaacggatcctat 27178696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 23343832 - 23343782
Alignment:
Q  84 gttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||| ||||||    
T  23343832 gttgagatttgatgtcaacgaatccgttgacatctggtgtcaacagatcct 23343782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 23857028 - 23857074
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatccta 23857074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 18174667 - 18174720
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||| |||||||| ||  |||||||||||||||    
T  18174667 cggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatccta 18174720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 42182612 - 42182665
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||||| |||||| || |||||||||| |||||    
T  42182612 cggttgagatttggtgtcaacgaatcccttgacacctggtgtcaacgggtccta 42182665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 8542545 - 8542597
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || ||||| | |||||||    
T  8542545 cggttgagatttggtgtcaacgaatccgttgacacctagtgtccatggatcct 8542597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 29513150 - 29513198
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||||    
T  29513150 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctat 29513198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 9540385 - 9540334
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||| ||||||||||||||| ||| |||||||| || |||||||||||||||    
T  9540385 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 9540334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 18174172 - 18174101
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||| || |||  |||||| |||||||||||||| ||| |||| ||| || ||||||||||||||||    
T  18174172 ttgattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatccta 18174101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 19918720 - 19918771
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||| ||||||| ||||||||||||||   ||||||||||||||    
T  19918720 ggttgagatttgatgtcaacgaatccgttgacatcagatgtcaacggatcct 19918771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 36237685 - 36237634
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||| ||||||||||||  |||||||||||| || |||||||||||||||    
T  36237685 ggttgaaatttggtgtcaatgaatccgttgacacctggtgtcaacggatcct 36237634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 15902885 - 15902931
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  15902885 agattttgtgtcaacgaatccgttgacacctggtgtcaacggatcct 15902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 27177959 - 27177913
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||| ||| |||||||| || |||||||||||||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctat 27177913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 29559420 - 29559470
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||| ||| |||||||| || |||||||| |||||||    
T  29559420 ttgagatttggtgtcaacgaattcgttgacacctggtgtcaacagatccta 29559470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 34812860 - 34812905
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||| ||| |||||||||||| || |||||||||||||||    
T  34812860 gatttggtgttaacgaatccgttgacaactggtgtcaacggatcct 34812905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 8e-20; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 3290743 - 3290841
Alignment:
Q  10 ggagcagagagtgaaaggttcacctcagttaatttaacaaataattaaggatccttgattaaacaagatattcggttgagatttggtgtcaaccaatcc 108  Q
    ||||||||||  ||||||||||  | ||||||||||| ||||||||||||| |||||||||||||| |||| | |||||||||| ||||||| ||||||    
T  3290743 ggagcagagatagaaaggttcatatgagttaatttaagaaataattaaggacccttgattaaacaacatatgcagttgagatttagtgtcaatcaatcc 3290841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 38576300 - 38576352
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  38576300 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 38576352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 31602116 - 31602018
Alignment:
Q  38 ttaatttaacaaataattaaggatccttg-attaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||| |||||||||||||| ||||| ||| |||||| ||  ||  ||||||||||||||||||||| ||| |||||||| || |||||||| |||||||    
T  31602116 ttaacttaacaaataattatggatcattggattaaataaattagacggttgagatttggtgtcaacgaattcgttgacacctggtgtcaaccgatccta 31602018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 31642084 - 31642136
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||    
T  31642084 cggttgagatttggtgtcaacgaattcgttgacatctggtgtcaatggatcct 31642136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 41974691 - 41974643
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||    
T  41974691 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 41974643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 28929894 - 28929844
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatat 138  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||| |||||    
T  28929894 agatttggtgtcaacgaatccgttgacatctggtgtcaatggatcttatat 28929844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 37025059 - 37025008
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| |||| ||||||| || ||||||||||||||||    
T  37025059 ggttgagatttggtgtcaacgaatctgttgaca-ctggtgtcaacggatccta 37025008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 8996972 - 8997023
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||| ||||||| || || ||||||||||||    
T  8996972 ggttgagatttggtgtcaacaaatcagttgacacctggtatcaacggatcct 8997023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 3165125 - 3165171
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||||||||||| ||  ||||||||||||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcct 3165171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 14825691 - 14825645
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||| ||||||| |||||||||||| || ||||||||||||||||    
T  14825691 gatttgatgtcaacgaatccgttgacacctagtgtcaacggatccta 14825645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 26654375 - 26654425
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatc 132  Q
    ||||| ||||||||||||||| ||||| |||||| || |||||||||||||    
T  26654375 cggttaagatttggtgtcaacgaatccattgacacctggtgtcaacggatc 26654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 32414527 - 32414573
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||||||||||| || |||||||| ||||||    
T  32414527 agatttggtgtcaacgaatccgttgacacctggtgtcaacagatcct 32414573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 11686961 - 11687014
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||| |||||||| ||| |||||||| |  ||||||||||||||||    
T  11686961 cggttgagatttagtgtcaacgaattcgttgacaccaggtgtcaacggatccta 11687014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 27441520 - 27441467
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||| ||||||| ||||||| ||| |||||||| || |||||||||||||||||    
T  27441520 ggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctat 27441467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 17603217 - 17603162
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  17603217 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatatatata 17603162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 11654033 - 11654088
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||    
T  11654033 agatttggtgtcaacgaatccgttgagatctggtgtcaatggatcctatatatata 11654088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 46150728 - 46150779
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  46150728 ggttgagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcct 46150779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 31974705 - 31974652
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||||||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  31974705 ggttgagatttggtgtcaacgaatccgttgacacttggtgtcaacggatcctat 31974652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 48648258 - 48648206
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||||||||    
T  48648258 cggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 48648206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 265099 - 265146
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatc 132  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||    
T  265099 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 21727533 - 21727579
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||    
T  21727533 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 21727579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 54458670 - 54458716
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatccta 54458716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 981722 - 981673
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggat 131  Q
    ||||||||||||||||||||| ||| |||||||| || ||||||||||||    
T  981722 cggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 14871204 - 14871156
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||| ||| |||||||| || |||||||||||||||    
T  14871204 tgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 14871156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 31115600 - 31115648
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcc 133  Q
    |||||||||||||||||| |||| ||||||| || ||||||||||||||    
T  31115600 ttgagatttggtgtcaacgaatctgttgacacctagtgtcaacggatcc 31115648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 41458088 - 41458036
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || || |||||| |||||    
T  41458088 cggttgagatttggtgtcaacgaatccgttgacacctggtatcaacgaatcct 41458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 48507030 - 48507082
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| ||| | |||||| || |||||||||||||||    
T  48507030 cggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 48507082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 37520560 - 37520611
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||||||| || || ||||||||||||    
T  37520560 ggttgagatttggtgtcaacgaattcgttgacacctggtatcaacggatcct 37520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 45081402 - 45081453
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||||||||||||    |||||||||||||||    
T  45081402 ggttgagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcct 45081453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 264518 - 264468
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||| ||||| |||||| || ||||||| ||||||||    
T  264518 ttgagatttggtgtcaacaaatccattgacacctggtgtcaatggatccta 264468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 13349515 - 13349409
Alignment:
Q  38 ttaatttaacaaataattaaggatccttg-attaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||| |||||||||||||| ||||| ||| |||||| ||  ||  ||||| ||||||||||||||| |||  ||||||| || || ||||| |||||||     
T  13349515 ttaacttaacaaataattatggatcattggattaaataaattagacggttaagatttggtgtcaacgaatttgttgacacctggtatcaaccgatcctaa 13349416  T
Q  137 atatata 143  Q
    |||||||    
T  13349415 atatata 13349409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 17605761 - 17605715
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacg 128  Q
    ||||||| ||||||||||||| |||||||||||| || |||||||||    
T  17605761 cggttgaaatttggtgtcaacgaatccgttgacacctggtgtcaacg 17605715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 51826592 - 51826546
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacg 128  Q
    ||||| ||||||||||| ||| ||||||||||||||| |||||||||    
T  51826592 cggttaagatttggtgttaacgaatccgttgacatctggtgtcaacg 51826546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 29856681 - 29856714
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgaca 115  Q
    ||||||||||||||||||||| ||||||||||||    
T  29856681 cggttgagatttggtgtcaacgaatccgttgaca 29856714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 44699916 - 44699883
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgaca 115  Q
    ||||||||||||||||||||| ||||||||||||    
T  44699916 cggttgagatttggtgtcaacgaatccgttgaca 44699883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 48413374 - 48413329
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaac 127  Q
    |||||| |||||||||||||| |||||||||||| || ||||||||    
T  48413374 cggttgtgatttggtgtcaacgaatccgttgacacctggtgtcaac 48413329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 3029196 - 3029257
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    |||||| |||||||||||||| ||| |||||||| || ||||||||||||||||||||||||    
T  3029196 cggttgggatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatatatata 3029257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 19067691 - 19067630
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||||||||| ||||||||||||  | ||||||||||||||| ||||||||    
T  19067691 cggttgagatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcctgtatatata 19067630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 25342550 - 25342498
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  25342550 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 25342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 25343356 - 25343304
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  25343356 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 25343304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 26636157 - 26636105
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  26636157 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 26636105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 26636858 - 26636910
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  26636858 cggttgagatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcct 26636910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 30661453 - 30661505
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  30661453 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 30661505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 37949659 - 37949607
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  37949659 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 37949607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 7668535 - 7668484
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  7668535 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 7668484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 701 - 752
Target Start/End: Complemental strand, 10482382 - 10482331
Alignment:
Q  701 cagatattagtttaaactttcatatatgatggtcgaacttgtttgtgtgtat 752  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  10482382 cagatattggtttaaactttcatatgtgatggtcgaacatgtttgtgtgtat 10482331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 31278159 - 31278206
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  31278159 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctat 31278206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 46428240 - 46428189
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  46428240 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 46428189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 24719386 - 24719336
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  24719386 ttgatatttggtgtcaacgaatccgttgacatctggtgtcaacggatccta 24719336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 25599094 - 25599024
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||| |||||   || |||||||||||||||||| |||||||||||| || |||||||||||||||    
T  25599094 ttgattaaataagatcaacgattgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25599024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 42421048 - 42421102
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||| ||||||||    
T  42421048 cggttgagatttggtgtcaacaaatcggttgacatctggtgtcaacagatcctat 42421102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 3772524 - 3772577
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  3772524 cggttgagatttggtgtcaacgaatacgttgacacctggtgtcaacggatccta 3772577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 24389615 - 24389668
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||||||||||||||||||  |||||||||||| || |||||||||||||||||    
T  24389615 ggttgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctat 24389668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 30660643 - 30660594
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  30660643 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 30660594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 37950469 - 37950518
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  37950469 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 37950518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 27948499 - 27948447
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  27948499 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 27948447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 43065120 - 43065175
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||||| |||||||||||| || ||||||||||||| | ||||||||    
T  43065120 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcttttatatata 43065175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 3688432 - 3688386
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||||    
T  3688432 agatttggtgtcaacgaatccgttgatatctggtgtcaacggatcct 3688386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 13785597 - 13785643
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||    
T  13785597 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 13785643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 14686181 - 14686131
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  14686181 tgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatcctat 14686131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 21496963 - 21497033
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||  |||||  ||||||||||||||||||||| ||| |||||||| ||  ||||||||||||||    
T  21496963 ttgattaaatgagataaacggttgagatttggtgtcaacgaattcgttgacacctgttgtcaacggatcct 21497033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 1417661 - 1417608
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||| ||||||||||||||| ||| |||||||| || |||||||||||||||||    
T  1417661 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctat 1417608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 38225974 - 38226027
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    |||| ||||||||||||||| ||| |||||||| || |||||||||||||||||    
T  38225974 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctat 38226027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 40273614 - 40273561
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||| | |||||| || ||||||||||||||||    
T  40273614 cggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatccta 40273561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 14305138 - 14305090
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||  |||||||||||| || |||||||||||||||||    
T  14305138 agatttggtgtcaatgaatccgttgacacctagtgtcaacggatcctat 14305090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 16664124 - 16664176
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||| ||||||||  ||||||||||| || ||||||||||||||||    
T  16664124 ggttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatccta 16664176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 17638484 - 17638536
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||| ||||||||  ||||||||||| || ||||||||||||||||    
T  17638484 ggttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatccta 17638536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 19068393 - 19068445
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||| ||||||||||||| ||| |||||||| || |||||||||||||||    
T  19068393 cggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 19068445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 45099899 - 45099943
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||| |||||||||||| || |||||||||||||||    
T  45099899 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 45099943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 47719708 - 47719756
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctat 136  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||||    
T  47719708 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctat 47719756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 18977768 - 18977819
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||| ||| |||||||||||| || ||||||| |||||||    
T  18977768 ggttgagatttggtgttaacgaatccgttgacacctggtgtcaatggatcct 18977819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 25343238 - 25343289
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| | |||||| || |||||||||||||||    
T  25343238 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 25343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 45162021 - 45161970
Alignment:
Q  84 gttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||| |||||||| ||| || ||||||| ||||||||    
T  45162021 gttgagatttggtgtcaacgaatccgttaacacctggtgtcaatggatccta 45161970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 45931218 - 45931268
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||  |||||||||||| | |||| |||||||||||    
T  45931218 ttgagatttggtgtcaacggatccgttgacatatggtgttaacggatccta 45931268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 3689276 - 3689321
Alignment:
Q  89 gatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||| |||| |||||||||  |||||||||||||||    
T  3689276 gatttggtgtcaacgaatctgttgacatcaggtgtcaacggatcct 3689321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 3903340 - 3903389
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||| |||||||||||||  ||||||||||| || |||||||||||||||    
T  3903340 ttgatatttggtgtcaacggatccgttgacacctggtgtcaacggatcct 3903389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 23889899 - 23889866
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacat 116  Q
    |||||||||||||||||||| |||||||||||||    
T  23889899 ggttgagatttggtgtcaacgaatccgttgacat 23889866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 23902094 - 23902061
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacat 116  Q
    |||||||||||||||||||| |||||||||||||    
T  23902094 ggttgagatttggtgtcaacgaatccgttgacat 23902061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 24453730 - 24453775
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcc 133  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||||    
T  24453730 agatttggtgtcaacaaatccgttgacacctggtgtcaacgaatcc 24453775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 37395505 - 37395550
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||| ||| |||||||||||| || ||||||||||||||||    
T  37395505 atttggtgttaacgaatccgttgacacctggtgtcaacggatccta 37395550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 10171330 - 10171278
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  10171330 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 10171278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 26529510 - 26529562
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  26529510 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 26529562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 505897 - 505959
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgtt-gacatctcgtgtcaacggatcctatatatata 143  Q
    ||||||||||||| ||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  505897 cggttgagatttgttgtcaacgaatccgtttgacatctgatgtcaacggatcctatatatata 505959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 33436277 - 33436323
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  33436277 agatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 33436323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 8488523 - 8488470
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| ||||||||    
T  8488523 cggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatccta 8488470  T

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Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 10171963 - 10172016
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  10171963 cggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatccta 10172016  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 26528877 - 26528824
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  26528877 cggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatccta 26528824  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 3623726 - 3623797
Alignment:
Q  64 ttgattaaacaagatattcggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||| || |||  |||||| |||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  3623726 ttgattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacatctggtgtcaacggatccta 3623797  T

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Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 19323765 - 19323816
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||||| ||| |||||||| || |||||||||||||||    
T  19323765 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 19323816  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 19311053 - 19311003
Alignment:
Q  84 gttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||||||| |||||||| ||| || |||||||||||||||    
T  19311053 gttgagatttggtgtcaacaaatccgttaacacctggtgtcaacggatcct 19311003  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 11434455 - 11434503
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggat 131  Q
    |||||||||||||||||||| ||||||||||||| | |||| |||||||    
T  11434455 ggttgagatttggtgtcaacgaatccgttgacatttggtgttaacggat 11434503  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 18227784 - 18227734
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| |||||||||||||| |||||||||||| || |||||||||||||||    
T  18227784 ggttgtgatttggtgtcaacgaatccgttgaca-ctggtgtcaacggatcct 18227734  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 19323033 - 19322990
Alignment:
Q  86 tgagatttggtgtcaaccaatccgttgacatctcgtgtcaacgg 129  Q
    ||||||||||||||||| |||||||||||| || ||||||||||    
T  19323033 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacgg 19322990  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 19311830 - 19311876
Alignment:
Q  88 agatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||||| |||||||||||| || ||||||||| |||||    
T  19311830 agatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcct 19311876  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 3623229 - 3623176
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||  ||| |||||||| ||  |||||||||||||||    
T  3623229 cggttgagatttggtgtcaaagaattcgttgacacctgatgtcaacggatccta 3623176  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 12344948 - 12344895
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||| ||||| |||| ||||||| || ||||||| ||||||||    
T  12344948 cggttgagatttggtatcaacgaatctgttgacacctggtgtcaatggatccta 12344895  T

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Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 23726 - 23779
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| ||||||||    
T  23726 cggttgagatttggtgtcaacgaatccgttgacaactggtgtcaatggatccta 23779  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 26645 - 26594
Alignment:
Q  83 ggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||| |||||||||||||| |||||||||||| || |||||||||||||||    
T  26645 ggttgtgatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 26594  T

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Target: scaffold1207 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 1641 - 1580
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcctatatatata 143  Q
    |||||| |||||||||||||| ||| |||||||| || |||||||| |||||| ||||||||    
T  1641 cggttgggatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctgtatatata 1580  T

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Target: scaffold1213 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 1948 - 1900
Alignment:
Q  84 gttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatc 132  Q
    |||| |||||||||||||| |||||||||||||||  ||||||||||||    
T  1948 gttgtgatttggtgtcaacgaatccgttgacatctgctgtcaacggatc 1900  T

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Target: scaffold0504 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 5385 - 5429
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||| |||||||||||| || |||||||||||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcct 5429  T

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Target: scaffold0085 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 22076 - 22120
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    ||||||||||||| |||||||||||| || |||||||||||||||    
T  22076 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 22120  T

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Target: scaffold2007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 802 - 753
Alignment:
Q  85 ttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatcct 134  Q
    |||||||||||||||||| |||||||||| | || ||||||| |||||||    
T  802 ttgagatttggtgtcaacgaatccgttgaaacctggtgtcaatggatcct 753  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 39942 - 39901
Alignment:
Q  90 atttggtgtcaaccaatccgttgacatctcgtgtcaacggat 131  Q
    ||||||||||||| |||||||||||| || ||||||||||||    
T  39942 atttggtgtcaacgaatccgttgacacctggtgtcaacggat 39901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 8289 - 8342
Alignment:
Q  82 cggttgagatttggtgtcaaccaatccgttgacatctcgtgtcaacggatccta 135  Q
    ||||||||||||||||| ||| ||| |||||||| || ||||||| ||||||||    
T  8289 cggttgagatttggtgttaacgaatacgttgacacctggtgtcaatggatccta 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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