View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3273_low_68 (Length: 250)
Name: NF3273_low_68
Description: NF3273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3273_low_68 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 245
Target Start/End: Complemental strand, 33183511 - 33183285
Alignment:
| Q |
19 |
gattgacctctacatgtaatgcaattggggttgacttgactttcattttatttggttatttttgcattgccactaattagctgtttttcacgcgtgttga |
118 |
Q |
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| T |
33183511 |
gattgacctctacatgtaatgcaattggggttgacttgactttcattttatttggttatttttgcattgccactaattagctgtttttcacgcgtgttga |
33183412 |
T |
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| Q |
119 |
gtattgacttaacaaaaccatagacttaagtagaagaatggaaataaattgcacctatgaactacttgctgagaaagaagaaaaagaacatttttattac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33183411 |
gtattgacttaacaaaaccatagacttaagtagaagaatggaaataaattgcacctatgaactacttgctgagaaagaagaaaaagaacatttttattac |
33183312 |
T |
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| Q |
219 |
tatttgcaactacatcatgatgatgtc |
245 |
Q |
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||||||||||||||||||||||||||| |
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| T |
33183311 |
tatttgcaactacatcatgatgatgtc |
33183285 |
T |
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