View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3275_high_8 (Length: 231)
Name: NF3275_high_8
Description: NF3275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3275_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 5511505 - 5511701
Alignment:
| Q |
18 |
caataatgtcaatttgtcaaaatgacccgtgggctataaactctggcattcatagtataattttgtcttcataaacaaatcaggtctaacatcatagtta |
117 |
Q |
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| T |
5511505 |
caataatgtcaatttgtcaaaatgacccgtgggctataaactctggcattcatagtataattttgtcttcataaaaaaatcaggtctaacatcatagtta |
5511604 |
T |
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| Q |
118 |
gctattgttggaatgttggtcagttttaataatggacaaaactaaggnnnnnnnngctgacagtaatggacaaacaaggttaggtaccccaactctg |
214 |
Q |
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| T |
5511605 |
gctattgttggaatgttggtcagttttaataatggacaaaactaaggtttttgttgctgacagtaatggacaaacaaggttaggtaccccaactctg |
5511701 |
T |
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