View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3275_low_4 (Length: 271)
Name: NF3275_low_4
Description: NF3275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3275_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 37140596 - 37140835
Alignment:
| Q |
14 |
gaacctgtggatagcggatcatcaagtgacaatgaggtattactgttctatggttactcttatacacttattagtctattgtcatatctgggtttaattc |
113 |
Q |
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| T |
37140596 |
gaacctgtggatagcggatcatcaagtgacaatgaggtattactgttctatggttactcttatacacttattagtctattgtcatatctggctttaattc |
37140695 |
T |
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| Q |
114 |
tgtttacttgtacaggaaactgatcaacacatgagaattactttcccggtaaagaaaatgcagacgatggcagatagatttcacaatgctttagggactt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37140696 |
tgtttacttgtacaggaaactgatcaacacatgagaattactttcccgggaaagaaaatgcagacgatggcagatagatttcacaatgctttagggactt |
37140795 |
T |
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| Q |
214 |
cctctgttatcactgaaagtgttggagcacataactcatt |
253 |
Q |
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|||||||||| ||||||||||||||||||||||||||||| |
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| T |
37140796 |
cctctgttattactgaaagtgttggagcacataactcatt |
37140835 |
T |
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