View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3276_low_34 (Length: 210)
Name: NF3276_low_34
Description: NF3276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3276_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 42484556 - 42484732
Alignment:
| Q |
15 |
caaagggagggctaataaggaaatataccatgatctatatgaaatctgacaaaaaggagggaggccatccatggaattcatacaaagagcacaaatgcaa |
114 |
Q |
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| T |
42484556 |
caaagggagggctaataaggaaatataccatgatctatatgaaatctgacaaaaaggagggaggccatccatggaattcatacaaagagcacaaatgcaa |
42484655 |
T |
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| Q |
115 |
acaccttcaaacaagaacaatatattgaactaattattgcaaaattataacaagaagtgcatttcaagagctctatc |
191 |
Q |
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| T |
42484656 |
acaccttcaaacaagaacaatatattgaactaattattgcaaaattataacaagaagtgcatttcaagagctctatc |
42484732 |
T |
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