View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3277_high_28 (Length: 249)
Name: NF3277_high_28
Description: NF3277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3277_high_28 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 9054995 - 9055231
Alignment:
| Q |
1 |
agtgtttggaaagtcttagaggttaatttagtttgtataatcatcggtatttaagatttaaaggatatggaacataggtgtaaattagttttgcaccgaa |
100 |
Q |
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| T |
9054995 |
agtgtttggaaagtcttggaggttaatttagtttgtataatcatcggtatttaagatttaaaggatatggaacataggtgtaaattagttttgcaccgaa |
9055094 |
T |
|
| Q |
101 |
tagaaattatgttctcgtagctacattttaaaagtggtgatatgatatgacaaaatagcggactcatattggatatcagacgtgtaaaactacttaacta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
9055095 |
tagaaattatgttctcgtagctacattttaaaagtggtgatatgatatgacaaaatagcagactcatattggatatcagacgtgtaaaactacttaacta |
9055194 |
T |
|
| Q |
201 |
cactggcaggcagtgtatgctcattaaactcgtgttc |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
9055195 |
cactggcaggcagtgtatgctcattaaactcgtgttc |
9055231 |
T |
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