View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3277_low_20 (Length: 318)

Name: NF3277_low_20
Description: NF3277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3277_low_20
NF3277_low_20
[»] chr7 (40 HSPs)
chr7 (171-277)||(29737314-29737420)
chr7 (185-277)||(4974539-4974630)
chr7 (185-277)||(35445567-35445658)
chr7 (185-277)||(42696253-42696345)
chr7 (185-267)||(15238564-15238645)
chr7 (185-267)||(37476884-37476965)
chr7 (185-274)||(20009902-20009991)
chr7 (185-277)||(3962148-3962239)
chr7 (185-277)||(24395141-24395232)
chr7 (185-277)||(30848739-30848830)
chr7 (185-277)||(34483008-34483099)
chr7 (185-277)||(35876414-35876505)
chr7 (185-277)||(42611981-42612072)
chr7 (185-277)||(45637881-45637972)
chr7 (185-277)||(48880731-48880822)
chr7 (185-274)||(15577651-15577739)
chr7 (185-277)||(15329444-15329535)
chr7 (185-261)||(25167660-25167735)
chr7 (185-267)||(18037157-18037238)
chr7 (188-253)||(3961991-3962056)
chr7 (188-253)||(15329285-15329350)
chr7 (188-253)||(48880915-48880980)
chr7 (188-253)||(4974723-4974788)
chr7 (188-253)||(18036990-18037055)
chr7 (188-253)||(34482847-34482912)
chr7 (188-253)||(42611823-42611888)
chr7 (188-253)||(45637724-45637789)
chr7 (188-250)||(15577841-15577903)
chr7 (188-253)||(36790454-36790519)
chr7 (188-253)||(37477068-37477133)
chr7 (188-230)||(24394984-24395026)
chr7 (141-187)||(28885512-28885558)
chr7 (188-253)||(20010086-20010150)
chr7 (188-253)||(25167838-25167903)
chr7 (188-253)||(29737151-29737216)
chr7 (188-253)||(35444570-35444635)
chr7 (146-188)||(32553681-32553723)
chr7 (188-253)||(15238394-15238459)
chr7 (204-253)||(30848597-30848646)
chr7 (188-241)||(36790283-36790336)
[»] chr3 (54 HSPs)
chr3 (178-277)||(33839705-33839804)
chr3 (185-277)||(36864836-36864928)
chr3 (185-277)||(47738281-47738373)
chr3 (185-274)||(40328004-40328093)
chr3 (185-277)||(33145882-33145973)
chr3 (185-277)||(42921295-42921387)
chr3 (185-277)||(3137218-3137309)
chr3 (185-277)||(26612916-26613008)
chr3 (185-277)||(34482692-34482783)
chr3 (185-277)||(37522223-37522314)
chr3 (185-267)||(8361843-8361924)
chr3 (185-277)||(3089589-3089680)
chr3 (185-277)||(3456234-3456325)
chr3 (185-277)||(19650704-19650795)
chr3 (185-276)||(24343720-24343811)
chr3 (188-277)||(30385570-30385658)
chr3 (185-277)||(2754889-2754980)
chr3 (185-277)||(3574330-3574421)
chr3 (185-277)||(8320386-8320477)
chr3 (185-277)||(22426149-22426240)
chr3 (185-277)||(33113964-33114055)
chr3 (185-277)||(37216857-37216948)
chr3 (185-267)||(9796833-9796914)
chr3 (185-269)||(6042055-6042138)
chr3 (185-269)||(48161084-48161167)
chr3 (185-267)||(41224414-41224495)
chr3 (219-277)||(42298032-42298090)
chr3 (188-253)||(3574515-3574580)
chr3 (188-253)||(6041896-6041961)
chr3 (188-253)||(42297365-42297431)
chr3 (188-253)||(2754729-2754794)
chr3 (188-253)||(3456076-3456141)
chr3 (188-253)||(11347280-11347345)
chr3 (188-253)||(37217041-37217106)
chr3 (188-253)||(37522065-37522130)
chr3 (188-253)||(48160917-48160982)
chr3 (185-269)||(46919072-46919156)
chr3 (188-253)||(3137402-3137467)
chr3 (188-253)||(8320572-8320637)
chr3 (188-253)||(9797017-9797082)
chr3 (188-253)||(19650888-19650953)
chr3 (188-253)||(22426332-22426397)
chr3 (188-253)||(33839543-33839608)
chr3 (188-232)||(42921155-42921199)
chr3 (188-253)||(33113805-33113870)
chr3 (188-253)||(33145725-33145789)
chr3 (189-253)||(30385024-30385088)
chr3 (206-253)||(8362033-8362080)
chr3 (191-274)||(41883031-41883114)
chr3 (188-253)||(34482898-34482963)
chr3 (204-253)||(41883211-41883260)
chr3 (129-186)||(42380740-42380797)
chr3 (129-186)||(42409454-42409511)
chr3 (188-253)||(47738117-47738182)
[»] chr8 (62 HSPs)
chr8 (185-277)||(32064916-32065007)
chr8 (185-276)||(37132484-37132575)
chr8 (185-277)||(6108037-6108128)
chr8 (185-277)||(20091605-20091696)
chr8 (185-277)||(34665551-34665642)
chr8 (185-277)||(3596845-3596936)
chr8 (185-277)||(17841654-17841745)
chr8 (185-277)||(25581043-25581134)
chr8 (185-277)||(26041917-26042008)
chr8 (185-277)||(30055686-30055777)
chr8 (185-277)||(40779933-40780024)
chr8 (185-277)||(42754846-42754937)
chr8 (185-269)||(1503647-1503730)
chr8 (185-277)||(14129029-14129120)
chr8 (204-277)||(41819590-41819663)
chr8 (185-277)||(10044518-10044609)
chr8 (185-277)||(24211176-24211267)
chr8 (185-277)||(37985860-37985951)
chr8 (188-277)||(32394027-32394114)
chr8 (185-277)||(1645768-1645859)
chr8 (185-277)||(15187730-15187821)
chr8 (185-257)||(30834859-30834931)
chr8 (185-265)||(31347580-31347659)
chr8 (185-276)||(38017103-38017194)
chr8 (187-277)||(39772608-39772697)
chr8 (188-277)||(35353211-35353299)
chr8 (185-273)||(3890418-3890506)
chr8 (185-277)||(24844664-24844756)
chr8 (185-267)||(7017662-7017743)
chr8 (185-267)||(7022159-7022240)
chr8 (208-277)||(8454003-8454072)
chr8 (188-253)||(1645953-1646018)
chr8 (188-253)||(8453846-8453911)
chr8 (188-253)||(14128876-14128941)
chr8 (188-253)||(26042104-26042169)
chr8 (188-253)||(32064757-32064822)
chr8 (188-253)||(32393870-32393935)
chr8 (188-253)||(34665394-34665459)
chr8 (188-253)||(35353053-35353118)
chr8 (188-253)||(37986043-37986108)
chr8 (188-253)||(42755030-42755095)
chr8 (188-253)||(6108221-6108286)
chr8 (188-253)||(7021990-7022055)
chr8 (188-253)||(17841838-17841903)
chr8 (188-253)||(20091789-20091854)
chr8 (188-253)||(24844847-24844911)
chr8 (188-253)||(31347770-31347835)
chr8 (188-253)||(40780117-40780182)
chr8 (222-274)||(27835293-27835345)
chr8 (188-252)||(38016983-38017047)
chr8 (204-253)||(3817918-3817967)
chr8 (188-253)||(15187572-15187637)
chr8 (204-253)||(15972865-15972914)
chr8 (188-253)||(24211541-24211606)
chr8 (188-253)||(27782105-27782170)
chr8 (145-186)||(38125618-38125659)
chr8 (188-253)||(39772789-39772854)
chr8 (188-253)||(41819766-41819831)
chr8 (200-248)||(37132651-37132699)
chr8 (188-227)||(1886633-1886672)
chr8 (188-253)||(7017853-7017918)
chr8 (188-253)||(30835035-30835099)
[»] chr6 (36 HSPs)
chr6 (185-277)||(28675318-28675409)
chr6 (185-277)||(17705273-17705363)
chr6 (185-277)||(29693615-29693707)
chr6 (185-277)||(32702375-32702466)
chr6 (185-277)||(33696867-33696958)
chr6 (185-277)||(2309227-2309318)
chr6 (185-277)||(33695130-33695221)
chr6 (185-277)||(17175825-17175916)
chr6 (187-274)||(6031546-6031632)
chr6 (185-267)||(11548393-11548474)
chr6 (185-277)||(18365378-18365469)
chr6 (185-277)||(18370642-18370733)
chr6 (188-253)||(17705453-17705518)
chr6 (185-277)||(23290885-23290976)
chr6 (188-253)||(6127287-6127352)
chr6 (204-277)||(18889466-18889539)
chr6 (188-253)||(23291072-23291137)
chr6 (188-253)||(17176009-17176074)
chr6 (188-253)||(33695315-33695380)
chr6 (188-253)||(33696708-33696773)
chr6 (185-255)||(582531-582602)
chr6 (219-277)||(6127447-6127505)
chr6 (185-243)||(34238891-34238948)
chr6 (188-253)||(6031729-6031794)
chr6 (188-253)||(11548576-11548641)
chr6 (188-253)||(28675160-28675225)
chr6 (188-253)||(18365561-18365626)
chr6 (188-253)||(18370825-18370890)
chr6 (188-243)||(8515723-8515778)
chr6 (246-277)||(9752110-9752141)
chr6 (215-277)||(8515560-8515622)
chr6 (203-253)||(9752233-9752283)
chr6 (188-253)||(18889685-18889749)
chr6 (188-253)||(25986942-25987007)
chr6 (188-253)||(32702217-32702282)
chr6 (129-185)||(30416941-30416997)
[»] scaffold0471 (2 HSPs)
scaffold0471 (185-277)||(13012-13103)
scaffold0471 (188-253)||(12854-12919)
[»] scaffold0178 (2 HSPs)
scaffold0178 (185-277)||(11791-11882)
scaffold0178 (188-253)||(11633-11698)
[»] chr5 (40 HSPs)
chr5 (185-277)||(3362949-3363040)
chr5 (185-277)||(3521811-3521902)
chr5 (185-277)||(6043316-6043407)
chr5 (185-277)||(12614541-12614633)
chr5 (185-277)||(4892372-4892463)
chr5 (185-277)||(33584133-33584224)
chr5 (185-277)||(8145543-8145634)
chr5 (185-277)||(12850972-12851063)
chr5 (185-277)||(25398408-25398499)
chr5 (185-277)||(38899529-38899621)
chr5 (185-267)||(17545486-17545567)
chr5 (185-267)||(22912861-22912942)
chr5 (185-277)||(37321597-37321688)
chr5 (185-277)||(2477806-2477897)
chr5 (185-277)||(14138837-14138928)
chr5 (188-253)||(2477648-2477713)
chr5 (188-253)||(11361119-11361184)
chr5 (188-253)||(4892214-4892279)
chr5 (188-253)||(8145387-8145452)
chr5 (129-186)||(8564912-8564969)
chr5 (188-253)||(12614721-12614786)
chr5 (188-253)||(22913042-22913107)
chr5 (188-253)||(25398250-25398315)
chr5 (218-277)||(4433844-4433903)
chr5 (188-253)||(6043499-6043564)
chr5 (188-253)||(33584317-33584382)
chr5 (197-277)||(11360947-11361026)
chr5 (193-253)||(37321781-37321841)
chr5 (219-269)||(13664737-13664787)
chr5 (193-274)||(27481995-27482077)
chr5 (188-253)||(3362790-3362855)
chr5 (188-253)||(14138680-14138745)
chr5 (188-253)||(38899714-38899779)
chr5 (188-244)||(10458409-10458465)
chr5 (219-277)||(36880150-36880213)
chr5 (188-253)||(4433995-4434060)
chr5 (188-253)||(12850813-12850878)
chr5 (188-253)||(17545673-17545738)
chr5 (193-230)||(27481843-27481880)
chr5 (146-187)||(34547730-34547771)
[»] chr4 (57 HSPs)
chr4 (185-277)||(17655600-17655692)
chr4 (185-277)||(21802124-21802215)
chr4 (185-277)||(24128409-24128500)
chr4 (185-277)||(44893017-44893108)
chr4 (185-277)||(44893596-44893687)
chr4 (185-277)||(36073519-36073610)
chr4 (185-277)||(37219801-37219893)
chr4 (185-277)||(46442014-46442105)
chr4 (185-274)||(11314055-11314144)
chr4 (185-277)||(4751617-4751708)
chr4 (185-277)||(9089040-9089131)
chr4 (185-277)||(49387691-49387782)
chr4 (185-277)||(50156383-50156473)
chr4 (185-277)||(53123201-53123292)
chr4 (185-275)||(42671840-42671930)
chr4 (185-277)||(22199429-22199520)
chr4 (185-277)||(36073121-36073212)
chr4 (185-277)||(47290236-47290327)
chr4 (185-267)||(10442591-10442672)
chr4 (185-267)||(24392854-24392935)
chr4 (204-277)||(30563379-30563452)
chr4 (185-277)||(2625007-2625098)
chr4 (185-277)||(31078623-31078714)
chr4 (185-277)||(37934745-37934837)
chr4 (186-277)||(23964269-23964359)
chr4 (185-269)||(7744916-7744999)
chr4 (185-277)||(33530488-33530579)
chr4 (188-253)||(7745100-7745165)
chr4 (188-253)||(33530676-33530741)
chr4 (129-179)||(4473076-4473126)
chr4 (185-272)||(44744607-44744690)
chr4 (188-253)||(10442777-10442842)
chr4 (188-253)||(23964453-23964518)
chr4 (188-253)||(31078807-31078872)
chr4 (129-186)||(32564847-32564904)
chr4 (196-269)||(36073276-36073349)
chr4 (188-253)||(42671681-42671746)
chr4 (188-253)||(49387876-49387941)
chr4 (188-253)||(2624849-2624914)
chr4 (188-253)||(21802310-21802375)
chr4 (188-253)||(22199273-22199338)
chr4 (188-253)||(24392679-24392744)
chr4 (185-230)||(25063378-25063423)
chr4 (188-253)||(36072959-36073024)
chr4 (188-253)||(47290078-47290143)
chr4 (188-253)||(50156566-50156631)
chr4 (189-253)||(36073731-36073795)
chr4 (188-253)||(4751458-4751523)
chr4 (129-186)||(7209058-7209115)
chr4 (188-253)||(24128251-24128316)
chr4 (188-253)||(36073362-36073427)
chr4 (188-253)||(44893438-44893503)
chr4 (188-253)||(46441856-46441921)
chr4 (188-253)||(44893201-44893267)
chr4 (188-253)||(53123042-53123108)
chr4 (204-253)||(9088898-9088947)
chr4 (185-213)||(53998988-53999016)
[»] chr2 (41 HSPs)
chr2 (185-277)||(9293379-9293470)
chr2 (185-277)||(10662058-10662149)
chr2 (185-277)||(23267866-23267957)
chr2 (185-277)||(22592880-22592974)
chr2 (185-277)||(33380377-33380468)
chr2 (185-277)||(35160929-35161020)
chr2 (197-267)||(37335824-37335894)
chr2 (185-277)||(7475312-7475403)
chr2 (185-277)||(9723576-9723668)
chr2 (185-277)||(3989246-3989337)
chr2 (205-277)||(16767285-16767357)
chr2 (185-267)||(21393490-21393570)
chr2 (185-277)||(13355018-13355109)
chr2 (185-277)||(31174639-31174730)
chr2 (19-79)||(37335893-37335953)
chr2 (185-267)||(43331092-43331173)
chr2 (188-253)||(10661899-10661964)
chr2 (188-253)||(35160769-35160834)
chr2 (219-277)||(14941201-14941259)
chr2 (219-267)||(34320994-34321042)
chr2 (219-277)||(21936252-21936310)
chr2 (188-253)||(7475496-7475561)
chr2 (188-253)||(9293564-9293629)
chr2 (188-253)||(9723417-9723482)
chr2 (188-253)||(14941354-14941419)
chr2 (188-253)||(21393676-21393741)
chr2 (188-253)||(21936093-21936158)
chr2 (188-253)||(23268050-23268115)
chr2 (188-253)||(31174822-31174887)
chr2 (188-253)||(33380219-33380284)
chr2 (188-253)||(43330924-43330989)
chr2 (140-186)||(9154164-9154210)
chr2 (204-253)||(3989104-3989153)
chr2 (129-186)||(12457018-12457075)
chr2 (188-253)||(13354858-13354923)
chr2 (188-253)||(27847644-27847709)
chr2 (141-186)||(33810617-33810662)
chr2 (129-186)||(36887339-36887396)
chr2 (129-186)||(41877555-41877612)
chr2 (141-186)||(12890265-12890310)
chr2 (158-186)||(12457065-12457093)
[»] chr1 (41 HSPs)
chr1 (185-277)||(37821638-37821729)
chr1 (185-277)||(25973577-25973668)
chr1 (185-277)||(51737675-51737766)
chr1 (188-277)||(19015574-19015662)
chr1 (185-277)||(18404618-18404709)
chr1 (185-277)||(36966512-36966603)
chr1 (185-277)||(41876246-41876337)
chr1 (185-267)||(32000070-32000151)
chr1 (185-267)||(33786435-33786516)
chr1 (185-267)||(40273888-40273969)
chr1 (185-277)||(6883657-6883748)
chr1 (185-277)||(9910095-9910186)
chr1 (185-277)||(20304934-20305025)
chr1 (185-269)||(40215166-40215249)
chr1 (185-277)||(44094867-44094958)
chr1 (185-274)||(44690825-44690914)
chr1 (185-277)||(3559787-3559878)
chr1 (185-277)||(25463846-25463937)
chr1 (185-253)||(19722903-19722970)
chr1 (185-253)||(40273711-40273779)
chr1 (190-253)||(27523243-27523306)
chr1 (188-269)||(10167577-10167658)
chr1 (188-253)||(16045786-16045851)
chr1 (188-253)||(25463688-25463753)
chr1 (188-277)||(27523062-27523151)
chr1 (188-253)||(32000255-32000320)
chr1 (188-253)||(40215000-40215065)
chr1 (185-253)||(33786623-33786690)
chr1 (185-249)||(52064381-52064445)
chr1 (188-253)||(3559629-3559694)
chr1 (188-253)||(18404454-18404519)
chr1 (188-253)||(44094710-44094775)
chr1 (188-253)||(9910281-9910346)
chr1 (188-253)||(19015416-19015481)
chr1 (188-253)||(36966696-36966761)
chr1 (188-253)||(37821822-37821887)
chr1 (188-249)||(41876434-41876495)
chr1 (219-277)||(52329445-52329503)
chr1 (188-253)||(6883499-6883564)
chr1 (188-253)||(25973426-25973490)
chr1 (145-185)||(7255168-7255208)
[»] scaffold0228 (5 HSPs)
scaffold0228 (185-277)||(26106-26197)
scaffold0228 (185-277)||(16154-16245)
scaffold0228 (188-253)||(8414-8479)
scaffold0228 (188-253)||(15996-16061)
scaffold0228 (188-253)||(25948-26013)
[»] scaffold0204 (2 HSPs)
scaffold0204 (185-277)||(4566-4657)
scaffold0204 (188-253)||(4408-4473)
[»] scaffold0085 (2 HSPs)
scaffold0085 (185-277)||(48019-48110)
scaffold0085 (189-253)||(47863-47927)
[»] scaffold0096 (2 HSPs)
scaffold0096 (185-277)||(41180-41271)
scaffold0096 (188-253)||(41023-41088)
[»] scaffold0665 (1 HSPs)
scaffold0665 (188-253)||(3080-3145)
[»] scaffold0001 (1 HSPs)
scaffold0001 (146-185)||(504626-504665)
[»] scaffold0009 (1 HSPs)
scaffold0009 (129-186)||(143351-143408)
[»] scaffold0064 (1 HSPs)
scaffold0064 (145-186)||(59434-59475)
[»] scaffold0263 (1 HSPs)
scaffold0263 (154-186)||(13373-13405)
[»] scaffold0002 (1 HSPs)
scaffold0002 (154-186)||(92001-92033)


Alignment Details
Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 29737420 - 29737314
Alignment:
Q  171 agggacagagggagtagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaac 270  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  29737420 agggacggagggagtagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaac 29737321  T
Q  271 ctttcat 277  Q
    |||||||    
T  29737320 ctttcat 29737314  T

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Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 4974539 - 4974630
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| || ||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  4974539 tagatatcaagaatgattttataaa-aaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 4974630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 35445658 - 35445567
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  35445658 tagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttcat 35445567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 42696345 - 42696253
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||||||    
T  42696345 tagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttcat 42696253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 15238645 - 15238564
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15238645 tagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 15238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 37476884 - 37476965
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  37476884 tagatatcaagaatgattt-atcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttatt 37476965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 20009902 - 20009991
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||    
T  20009902 tagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaaccttt 20009991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 3962239 - 3962148
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  3962239 tagatatcaagaatgattttat-aagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3962148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 24395232 - 24395141
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| || ||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  24395232 tagatatcaagaatgattttataaa-aaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24395141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 30848830 - 30848739
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||| |||| |||||||| ||| |||||||||||||||||||| |||||||    
T  30848830 tagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcat 30848739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 34483099 - 34483008
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||| ||||||||||||| |||||||    
T  34483099 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 34483008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 35876505 - 35876414
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| || ||| ||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  35876505 tagatatcaagaatgattttat-aagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 35876414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 42612072 - 42611981
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| || ||||||||||||| |||| |||||||| |||||||||||||| ||||||||| |||||||    
T  42612072 tagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcat 42611981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 45637972 - 45637881
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||| |||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  45637972 tagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 45637881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 48880731 - 48880822
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||  |||||||||||| ||||||||||| |||||||    
T  48880731 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttcat 48880822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 15577651 - 15577739
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  15577651 tagatatcaagaatgattttat-aagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatcttt 15577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 15329535 - 15329444
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||| |||||||||||||| |||||| ||| |||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||||    
T  15329535 tagatataaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcat 15329444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 25167660 - 25167735
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctca 261  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| ||||||||||||||||    
T  25167660 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca 25167735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 18037238 - 18037157
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||  ||| |||||||||||||||||||||| ||||||||    
T  18037238 tagatatcaacaatgattt-atcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt 18037157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3961991 - 3962056
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||| ||||    
T  3961991 atatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattt 3962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 15329285 - 15329350
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || ||||||||||||||| | |||||||||||||||||    
T  15329285 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 48880980 - 48880915
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || ||||||||||||||| | |||||||||||||||||    
T  48880980 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 4974788 - 4974723
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  4974788 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 18036990 - 18037055
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||||||||||||||||||| || | |||||||||||| ||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattt 18037055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 34482847 - 34482912
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || | |||||||||||||||||    
T  34482847 atatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 42611823 - 42611888
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  42611823 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 45637724 - 45637789
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  45637724 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 15577903 - 15577841
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttaga 250  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | ||||||||||||||    
T  15577903 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 36790519 - 36790454
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| | |||||||||||||||||||||||||||||| || | |||| ||||||| ||||    
T  36790519 atatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattt 36790454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37477133 - 37477068
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||||||||||||||||||| || | |||||| ||||| ||||    
T  37477133 atatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatcatccttaaattt 37477068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 24394984 - 24395026
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatg 230  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  24394984 atatcaagaaagattttatcaagaaaattttaagaatgacatg 24395026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 28885512 - 28885558
Alignment:
Q  141 ttttcctctaataaaaaggtgcttacatatagggacagagggagtag 187  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||    
T  28885512 ttttcctctaataaaagggtgcttacatataaggacggagggagtag 28885558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 20010150 - 20010086
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| || ||||||||||| ||| | |||||||||||||||||    
T  20010150 atatcaagaaagattttatcaaaaaaatttcaagaatgacat-acagaataatcacccttagattt 20010086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 25167903 - 25167838
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| | ||||||| ||||||||||||||| || | |||||| ||||||||||    
T  25167903 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattt 25167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 29737151 - 29737216
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| | ||||||| |||||||||||||||  | | |||||||||||||||||    
T  29737151 atatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattt 29737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 35444570 - 35444635
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||| ||||||||| || |||||||||||| || | |||||||||||||||||    
T  35444570 atattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 32553723 - 32553681
Alignment:
Q  146 ctctaataaaaaggtgcttacatatagggacagagggagtaga 188  Q
    ||||||||||| |||| |||||||||||||| |||||||||||    
T  32553723 ctctaataaaagggtgtttacatatagggacggagggagtaga 32553681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 15238394 - 15238459
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  | ||| |||||||||||| |||||||||||| || | |||||||| ||||||||    
T  15238394 atatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 30848597 - 30848646
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||| ||||||||||||||| || | |||||| ||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatcatccttagattt 30848646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 36790283 - 36790336
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatc 241  Q
    ||||||| |||| ||||||||| ||| ||| ||||||||||||||||| |||||    
T  36790283 atatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc 36790336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 33839804 - 33839705
Alignment:
Q  178 gagggagtagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  33839804 gagggagtatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcat 33839705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 36864836 - 36864928
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36864836 tagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttcat 36864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 47738373 - 47738281
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||    
T  47738373 tagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctttcat 47738281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 40328093 - 40328004
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  40328093 tagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttaccttt 40328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 33145973 - 33145882
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  33145973 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcat 33145882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 42921387 - 42921295
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||    
T  42921387 tagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 3137218 - 3137309
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  3137218 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3137309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 26613008 - 26612916
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| ||||||||||| |||||| ||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  26613008 tagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 26612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 34482692 - 34482783
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  34482692 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 34482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 37522314 - 37522223
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||| |||||||||||||||||||||||| |||||||    
T  37522314 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttcat 37522223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 8361843 - 8361924
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8361843 tagatatcaagaatgattt-atcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttatt 8361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 3089680 - 3089589
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| || ||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  3089680 tagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3089589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 3456325 - 3456234
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||    
T  3456325 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatctttcat 3456234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 19650704 - 19650795
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  19650704 tagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 19650795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 24343811 - 24343720
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttca 276  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||| ||||||||||||||||    
T  24343811 tagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctttca 24343720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 30385658 - 30385570
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  30385658 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 30385570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 2754980 - 2754889
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| |||| |||||||| ||| |||||||||||||||||||| |||||||    
T  2754980 tagatatcaagaatcattttat-aagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcat 2754889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 3574330 - 3574421
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||    
T  3574330 tagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttcat 3574421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 8320386 - 8320477
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| ||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  8320386 tagatatcaataatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8320477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 22426149 - 22426240
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||||    
T  22426149 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcat 22426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 33114055 - 33113964
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||| ||||||||||||| |||||||    
T  33114055 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 33113964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 37216857 - 37216948
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||  ||| |||||||| |||||||||||||||||||||||| |||||||    
T  37216857 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcat 37216948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 9796833 - 9796914
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  9796833 tagatatcaagaatgattt-atcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt 9796914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 6042138 - 6042055
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  6042138 tagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 6042055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 48161167 - 48161084
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    |||||||||||||||||||||| |||||| ||  ||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  48161167 tagatatcaagaatgattttat-aagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaa 48161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 41224495 - 41224414
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||||||| |||||| |||||||||||    
T  41224495 tagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatt 41224414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 42298090 - 42298032
Alignment:
Q  219 aagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  42298090 aagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttcat 42298032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 3574580 - 3574515
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  3574580 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6041896 - 6041961
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || ||||||||||||||| | |||||||||||||||||    
T  6041896 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 42297365 - 42297431
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgac-acagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| | | |||||||||||||||||    
T  42297365 atatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatcacccttagattt 42297431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 2754729 - 2754794
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||| ||||||||    
T  2754729 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3456076 - 3456141
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| || | |||||||||||||||||    
T  3456076 atatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattt 3456141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 11347280 - 11347345
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||| ||||||||||||    
T  11347280 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattt 11347345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37217106 - 37217041
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||| ||||    
T  37217106 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 37522065 - 37522130
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||| | |||||||||| ||||||    
T  37522065 atatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatcaccctaagattt 37522130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 48160917 - 48160982
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| || | |||||||||||||||||    
T  48160917 atatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattt 48160982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 46919156 - 46919072
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    ||||||||||||||||||||||||| ||| ||| || ||||||||| || | ||||||||  |||||||| |||| |||||||||    
T  46919156 tagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaa 46919072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 3137467 - 3137402
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||||||||||||||    
T  3137467 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 8320637 - 8320572
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| || | |||||||||||| ||||    
T  8320637 atatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatcacccttaaattt 8320572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 9797082 - 9797017
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| |||||||||||| |||||||||||| || | |||||||| ||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 19650953 - 19650888
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||||||||||||| ||||||||||||||| || | |||||||| ||||||||    
T  19650953 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattt 19650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 22426397 - 22426332
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||||||||||||| ||||| ||||||||| || | |||||||||||||||||    
T  22426397 atattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagattt 22426332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 33839543 - 33839608
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| ||||||||||| |||||||||||||| |||||||| | |||||||| ||||||||    
T  33839543 atattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatcaccattagattt 33839608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 42921155 - 42921199
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgac 232  Q
    |||||||||| |||||||||||||||| |||||||||||||||||    
T  42921155 atatcaagaaagattttatcaagaaaattttaagaatgacatgac 42921199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 33113805 - 33113870
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||| ||||||| || |||||| ||||| || | |||||||||||||||||    
T  33113805 atatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatcacccttagattt 33113870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 33145725 - 33145789
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||| || |||| ||||||||||||||| || | |||||||||||||||||    
T  33145725 atatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 30385024 - 30385088
Alignment:
Q  189 tatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||| |||||||||||||||| || || ||||||||| || | |||||||||||| ||||    
T  30385024 tatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattt 30385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 8362080 - 8362033
Alignment:
Q  206 tcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||||| |||||||||||| || | |||||||||||||||||    
T  8362080 tcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 41883031 - 41883114
Alignment:
Q  191 tcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    |||| ||||||||||| |||||| ||| ||||||||||||  | | |||||| | || ||||||||||| |||||| |||||||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttt 41883114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 34482963 - 34482898
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||| |||  | | |||||||||||||||||    
T  34482963 atatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattt 34482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 41883260 - 41883211
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||||||| |||||||||||| || | |||||||||||| ||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 41883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 42380740 - 42380797
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||  |||| |||||||||||| |||  ||| ||||||||||||||||||||    
T  42380740 atgtaagcatcctttgcctctaataaaagggttattagatatagggacagagggagta 42380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 42409454 - 42409511
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||  |||| |||||||||||| |||  ||| ||||||||||||||||||||    
T  42409454 atgtaagcatcctttgcctctaataaaagggttattagatatagggacagagggagta 42409511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 47738117 - 47738182
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||||||| ||| |||||||| ||| || | |||| ||| ||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattt 47738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 32065007 - 32064916
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  32065007 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 32064916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 37132484 - 37132575
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttca 276  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  37132484 tagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca 37132575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 6108037 - 6108128
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  6108037 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 6108128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 20091605 - 20091696
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  20091605 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 20091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 34665642 - 34665551
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  34665642 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 34665551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 3596845 - 3596936
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  3596845 tagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3596936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 17841654 - 17841745
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  17841654 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 17841745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 25581043 - 25581134
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||||    
T  25581043 tagatatcaagaatgattttat-aagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctttcat 25581134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 26041917 - 26042008
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  26041917 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 26042008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 30055777 - 30055686
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||| |||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  30055777 tagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctttcat 30055686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 40779933 - 40780024
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  40779933 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 40780024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 42754846 - 42754937
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||| |||||||    
T  42754846 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcat 42754937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 1503647 - 1503730
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  1503647 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 1503730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 14129120 - 14129029
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  14129120 tagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 14129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 41819590 - 41819663
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  41819590 tatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcat 41819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 10044609 - 10044518
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||| ||||||||||||| |||||||    
T  10044609 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 10044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 24211176 - 24211267
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  24211176 tagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 37985860 - 37985951
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| ||||||||||||| |||||||||| |||||||    
T  37985860 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttcat 37985951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 32394114 - 32394027
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||| || ||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  32394114 atatcaagaatgattttataaa-aaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttcat 32394027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 1645768 - 1645859
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| |   |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  1645768 tagatatcaagaatgattttat-aagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 1645859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 15187821 - 15187730
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||  |||| |||||||| |||||||||||||||||||||||| |||||||    
T  15187821 tagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 15187730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 30834859 - 30834931
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagt 257  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||| |||||||||||||||||    
T  30834859 tagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagt 30834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 31347580 - 31347659
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcattta 265  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||| ||||||||||||||||||||    
T  31347580 tagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 38017194 - 38017103
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatc-acccttagatttcagtctcatttattaacctttca 276  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||  ||| |||||||||||||||||||||||| ||||||    
T  38017194 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttca 38017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 39772608 - 39772697
Alignment:
Q  187 gatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||| |||||| ||  ||||||||||||||||| |||||||| |||||||||||| || |||||||| |||||||    
T  39772608 gatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcat 39772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 35353299 - 35353211
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| ||| |||| | ||||||||||||| |||||||    
T  35353299 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcat 35353211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 273
Target Start/End: Original strand, 3890418 - 3890506
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctt 273  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||| || | |||||||| |||||||| | ||| |||||||||||||    
T  3890418 tagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaacctt 3890506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 24844664 - 24844756
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||| || | ||||||| ||||||||| | ||| | |||||||||||||||    
T  24844664 tagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttcat 24844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 7017662 - 7017743
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||   | | |||||| ||||||||||||||||||||||||    
T  7017662 tagatatcaagaatgattt-atcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt 7017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 7022240 - 7022159
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    |||||||||| |||||||| ||||||||| ||| |||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  7022240 tagatatcaacaatgattt-atcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt 7022159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 8454072 - 8454003
Alignment:
Q  208 aagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  8454072 aagaagaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8454003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 1646018 - 1645953
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |||||||| |||||| || | |||||||||||||||||    
T  1646018 atatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatcacccttagattt 1645953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 8453846 - 8453911
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || ||||||||||||||| | |||||||||||||||||    
T  8453846 atatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattt 8453911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 14128876 - 14128941
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| || | |||||||||||||||||    
T  14128876 atatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 14128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 26042169 - 26042104
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||||||||||||| || ||||||||||||||| | |||||||||||||||||    
T  26042169 atattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 32064757 - 32064822
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  32064757 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 32393870 - 32393935
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||| ||||    
T  32393870 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 32393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 34665394 - 34665459
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  34665394 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 35353053 - 35353118
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| || | |||||||||||||||||    
T  35353053 atatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37986108 - 37986043
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| || | |||||||||||||||||    
T  37986108 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 37986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 42755095 - 42755030
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 6108286 - 6108221
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| | ||||||| ||||||||||||||| || | |||||||||||||||||    
T  6108286 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattt 6108221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 7021990 - 7022055
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| |||||||||||| |||||||| ||| || | |||||||||||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17841903 - 17841838
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||||||||||||||    
T  17841903 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 20091854 - 20091789
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  ||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  20091854 atatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 24844911 - 24844847
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  ||||||| |||||||||| ||||||||||||||| | |||||||||||||||||    
T  24844911 atatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattt 24844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 31347835 - 31347770
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  ||||| |||||||||||| |||||||||||| || | |||||||||||||||||    
T  31347835 atatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 40780182 - 40780117
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||||||||||||||    
T  40780182 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 27835293 - 27835345
Alignment:
Q  222 aatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    ||||| |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  27835293 aatgatatgacacaataatcatccttagatttcaatctcatttattaaccttt 27835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 38016983 - 38017047
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatt 252  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | ||||||||||| ||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttggatt 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 3817967 - 3817918
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||||||| |||||| |||||||| | |||||||||||||||||    
T  3817967 tatcaagaaaaattcaagaattacatgacagaataatcacccttagattt 3817918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 15187572 - 15187637
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||| ||| || | |||| ||||||||||||    
T  15187572 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 15187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 15972914 - 15972865
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||| ||||||||||||||| | |||||||||||||||||    
T  15972914 tatcaagaaagattgaagaatgacatgacagaataatcacccttagattt 15972865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 24211606 - 24211541
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || ||||||| |||| || | |||||||||||| ||||    
T  24211606 atatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatcacccttaaattt 24211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 27782170 - 27782105
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  |||||||||||||| ||| || ||||||||| || | |||||||||||||||||    
T  27782170 atatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 38125618 - 38125659
Alignment:
Q  145 cctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  38125618 cctctaataaaagggtgcttacatatagggacggagggagta 38125659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 39772854 - 39772789
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  |||||||||| |||| || |||||||||||| || | |||||||||||||||||    
T  39772854 atatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 41819831 - 41819766
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||||||   ||||||||||| ||| || | |||||||||||||||||    
T  41819831 atatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatcacccttagattt 41819766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 37132699 - 37132651
Alignment:
Q  200 attttatcaagaaaaatttaagaatgacatgacacagtaatcaccctta 248  Q
    ||||||||||||||||||||||||||||||| || | |||||| |||||    
T  37132699 attttatcaagaaaaatttaagaatgacatggcagaataatcatcctta 37132651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 1886672 - 1886633
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgac 227  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgac 1886633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 7017918 - 7017853
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||| ||| |||||| | |||||||||| |||||||||||| || | |||||| ||||||||||    
T  7017918 atatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 30835099 - 30835035
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||| | ||||||| |||||||||||| || | ||||||||||| |||||    
T  30835099 atatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatcaccctttgattt 30835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 28675409 - 28675318
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28675409 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttcat 28675318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 17705273 - 17705363
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  17705273 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacc-ttagatttcagtctcatttattaacctttcat 17705363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 29693707 - 29693615
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || | |||| |||||||||||||||||| |||||||| ||||||||    
T  29693707 tagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctttcat 29693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 32702466 - 32702375
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  32702466 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcat 32702375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 33696958 - 33696867
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  33696958 tagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 33696867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 2309227 - 2309318
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||  |||||||||| |||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  2309227 tagatatcaacgatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 2309318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 33695130 - 33695221
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  33695130 tagatatcaagaatgattttat-aagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatctttcat 33695221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 17175825 - 17175916
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||  ||| |||||||| |||||||||||||||||||||||| |||||||    
T  17175825 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcat 17175916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 6031546 - 6031632
Alignment:
Q  187 gatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    |||||||||||||||||||| || ||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  6031546 gatatcaagaatgattttataaa-aaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 6031632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 11548393 - 11548474
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||  ||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  11548393 tagatatcaagaatgattt-atcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 11548474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 18365378 - 18365469
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||  |||| |||||||| |||||||||||||||||||||||| |||||||    
T  18365378 tagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 18365469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 18370642 - 18370733
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||  |||| |||||||| |||||||||||||||||||||||| |||||||    
T  18370642 tagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 18370733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17705518 - 17705453
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  17705518 atatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattt 17705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 23290885 - 23290976
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| ||||||||||| |||||| ||| |||||||| ||| |||| |||| ||| |||||||||||||||||||||||| |||||||    
T  23290885 tagatatcaaaaatgattttat-aagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttcat 23290976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6127287 - 6127352
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  6127287 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 18889466 - 18889539
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||  ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  18889466 tatcaagaatgattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 18889539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 23291137 - 23291072
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  23291137 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17176074 - 17176009
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| || ||||||||||||||| | |||||||||||||||||    
T  17176074 atatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattt 17176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 33695380 - 33695315
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  33695380 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 33696708 - 33696773
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  33696708 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 582531 - 582602
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacat-gacacagtaatcacccttagatttca 255  Q
    |||||||||||||||||||||| ||||||||||||||||||| || | || | |||||||| ||||||||||    
T  582531 tagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 6127505 - 6127447
Alignment:
Q  219 aagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||||    
T  6127505 aagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcat 6127447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 34238891 - 34238948
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcac 243  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||| |||||||    
T  34238891 tagatatcaagaatgattttatcaag-aagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 6031794 - 6031729
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||| ||||| |||| |||||||||||||||||| | |||||||||||| ||||    
T  6031794 atatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatcacccttaaattt 6031729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 11548641 - 11548576
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  ||||| |||||||||||| |||||||||||| || | |||||||||||||||||    
T  11548641 atatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 28675160 - 28675225
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| |  | |||||||||||||||||    
T  28675160 atatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattt 28675225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 18365626 - 18365561
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| || |||||||||||| || | |||||||||||| ||||    
T  18365626 atatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 18370890 - 18370825
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| || |||||||||||| || | |||||||||||| ||||    
T  18370890 atatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18370825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 8515778 - 8515723
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcac 243  Q
    |||||||||| ||||||||||||| | |||||||||||||||| || | |||||||    
T  8515778 atatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 277
Target Start/End: Original strand, 9752110 - 9752141
Alignment:
Q  246 ttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||||||||||||||||    
T  9752110 ttagatttcagtctcatttattaacctttcat 9752141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 8515560 - 8515622
Alignment:
Q  215 atttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||| |||||||||  | | ||||||| ||||||||||||||| |||||||||| ||||||    
T  8515560 atttaaaaatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcat 8515622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 9752283 - 9752233
Alignment:
Q  203 ttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||||||| |||||||| ||| || | |||||||||||||||||    
T  9752283 ttatcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 9752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 18889749 - 18889685
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||| |||||||||| || |||||||||||| || | |||| ||||||||||||    
T  18889749 atatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25986942 - 25987007
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||| ||||||| || |||||||||||| || | ||||||| |||| ||||    
T  25986942 atatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcactcttaaattt 25987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 32702217 - 32702282
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||| ||||| || |||||||| ||| || | |||||||||||||||||    
T  32702217 atatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatcacccttagattt 32702282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 30416941 - 30416997
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagt 185  Q
    ||||||| | ||||| |||||||||||| | ||||||||||||||| | ||||||||    
T  30416941 atgtaagaactctttgcctctaataaaaggatgcttacatataggggcggagggagt 30416997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 13103 - 13012
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  13103 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcat 13012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 12854 - 12919
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||| ||||||||||    
T  12854 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 11882 - 11791
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  11882 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 11791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 11633 - 11698
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || ||||||||||||||| | |||||||||||||||||    
T  11633 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 3363040 - 3362949
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||    
T  3363040 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcat 3362949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 3521811 - 3521902
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  3521811 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3521902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 6043316 - 6043407
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  6043316 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 6043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 12614541 - 12614633
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  12614541 tagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 12614633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 4892463 - 4892372
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  4892463 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 4892372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 33584133 - 33584224
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  33584133 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 33584224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 8145634 - 8145543
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  8145634 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8145543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 12851063 - 12850972
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| ||| |||| |||||||||||||||||||||||| |||||||    
T  12851063 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 12850972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 25398499 - 25398408
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| || ||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  25398499 tagatatcaagaatgattttat-aagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 25398408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 38899529 - 38899621
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| || ||||||| |||||||||||| |||| ||| |||| |||||||||||||||||||||||| |||||||    
T  38899529 tagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 38899621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 17545486 - 17545567
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17545486 tagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 17545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 22912861 - 22912942
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  22912861 tagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 22912942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 37321597 - 37321688
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||| ||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  37321597 tagatatcaagaatgattttat-aagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttcat 37321688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 2477897 - 2477806
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| || ||||||||||||| |||| | |||||| |||||||||||||| ||||||||| |||||||    
T  2477897 tagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttcat 2477806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 14138928 - 14138837
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||| |||||||||||||| |||||| ||| |||||||||||| |||| |||||||| |||||||||| ||||||||||||| |||||||    
T  14138928 tagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 14138837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 2477648 - 2477713
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  2477648 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 11361184 - 11361119
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  11361184 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 4892214 - 4892279
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| || | |||||||||||||||||    
T  4892214 atatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 8145387 - 8145452
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 8564912 - 8564969
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||    
T  8564912 atgtaagcatttttttcttctaataaaaaggtgcttacatatagggacggagggagta 8564969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 12614786 - 12614721
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  |||||||||||||| ||| ||||||||||||||| | |||||||||||||||||    
T  12614786 atatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 22913107 - 22913042
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| |||||||||||| |||||||||||| || | |||||||||||||||||    
T  22913107 atatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25398250 - 25398315
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| || | |||||||||||||||||    
T  25398250 atatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 25398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 277
Target Start/End: Original strand, 4433844 - 4433903
Alignment:
Q  218 taagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||| |||| |||||||| |||||||||||||| ||||||||| |||||||    
T  4433844 taagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcat 4433903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 6043564 - 6043499
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || ||||||||||||  | | |||||||||||||||||    
T  6043564 atatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 33584382 - 33584317
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| || | |||||||||||| ||||    
T  33584382 atatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 33584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 11360947 - 11361026
Alignment:
Q  197 atgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| |||||| ||| |||||||||||| |||| |||||| | |||||||||| ||| ||||||||| |||||||    
T  11360947 atgattttat-aagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcat 11361026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 37321841 - 37321781
Alignment:
Q  193 aagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||| |||||||||||||||| ||||||||||||||| || | |||||||||||| ||||    
T  37321841 aagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37321781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 13664787 - 13664737
Alignment:
Q  219 aagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    ||||||||||||| | | ||||||||||||||||||||||| |||||||||    
T  13664787 aagaatgacatgatagaataatcacccttagatttcagtcttatttattaa 13664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 27482077 - 27481995
Alignment:
Q  193 aagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttaga-tttcagtctcatttattaaccttt 274  Q
    ||||||||||||||||| ||| ||| ||||||||||| ||| | |||||||| ||||| ||| | ||| ||||||||||||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttt 27481995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3362790 - 3362855
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |  |||||||||||| || | ||| |||||||||||||    
T  3362790 atatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 3362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 14138680 - 14138745
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||| ||||| || | |||||||||||| ||||    
T  14138680 atatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatcacccttaaattt 14138745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 38899779 - 38899714
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |  |||||||||||| || | ||| |||||||||||||    
T  38899779 atatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 38899714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 10458409 - 10458465
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacc 244  Q
    ||||||||||  |||||||||||||||||| |||||||||||| || | ||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcacc 10458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 36880150 - 36880213
Alignment:
Q  219 aagaatgacatgacaca----gtaatcacccttaga-tttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||     |||||||||||||| |||||||||||| ||||||||||||||    
T  36880150 aagaatgacatgacacaatatataatcacccttagattttcagtctcatctattaacctttcat 36880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 4434060 - 4433995
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| | ||||||| || |||||||| ||| || | |||||||||||||||||    
T  4434060 atatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattt 4433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 12850813 - 12850878
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |  || ||||||||| || | ||| |||||||||||||    
T  12850813 atatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattt 12850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17545738 - 17545673
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  | ||| |||||||||||| |||||||||||| || | |||||||| ||||||||    
T  17545738 atatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 27481843 - 27481880
Alignment:
Q  193 aagaatgattttatcaagaaaaatttaagaatgacatg 230  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  27481843 aagaaagattttatcaagaaaaattcaagaatgacatg 27481880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 34547771 - 34547730
Alignment:
Q  146 ctctaataaaaaggtgcttacatatagggacagagggagtag 187  Q
    |||| ||||||||||| |||||||||||||||||| ||||||    
T  34547771 ctctgataaaaaggtgtttacatatagggacagagagagtag 34547730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 17655692 - 17655600
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||| ||| ||||||||||||||||||||||||||||||||    
T  17655692 tagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 21802124 - 21802215
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  21802124 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcat 21802215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 24128500 - 24128409
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  24128500 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcat 24128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 44893017 - 44893108
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  44893017 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 44893108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 44893687 - 44893596
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  44893687 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 44893596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 36073610 - 36073519
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  36073610 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 36073519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 37219893 - 37219801
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || | |||||| |||||||||||| ||| |||||||||||||||||    
T  37219893 tagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttcat 37219801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 46442105 - 46442014
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  46442105 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 46442014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 11314055 - 11314144
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||    
T  11314055 tagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 4751708 - 4751617
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||||| |||||||    
T  4751708 tagatatcaagaataattttat-aagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 4751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 9089131 - 9089040
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||| | |||||||||||||||||||||||| |||||||    
T  9089131 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcat 9089040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 49387691 - 49387782
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  49387691 tagatatcaaggatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 49387782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 50156383 - 50156473
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||    
T  50156383 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacataataatcacc-ttagatttcagtctcatttattaatctttcat 50156473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 53123292 - 53123201
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||| | |||||||||||||||||||||||| |||||||    
T  53123292 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcat 53123201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 42671930 - 42671840
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttc 275  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||  ||||||||| |||||||||| ||||||||||    
T  42671930 tagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 22199520 - 22199429
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  22199520 tagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 22199429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 36073212 - 36073121
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||| |||| ||| |||| |||||||||||||||||||||||| |||||||    
T  36073212 tagatatcaaaaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 36073121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 47290327 - 47290236
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||  ||| |||||||| |||||||||||||||||||||||  |||||||    
T  47290327 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattctttcat 47290236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 10442591 - 10442672
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  10442591 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 10442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 24392935 - 24392854
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  24392935 tagatatcaagaatgattt-atcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttatt 24392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 30563452 - 30563379
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  30563452 tatcaagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcat 30563379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 2625098 - 2625007
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||  |||| |||||||| |||||||||||||||||||||||| |||||||    
T  2625098 tagatatcaagaatgattttat-aagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 2625007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 31078623 - 31078714
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| || ||||||| |||||||||||| |||| |||||| | |||||||||| ||||||||||||| |||||||    
T  31078623 tagatatcaagaatgattttataaa-aaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttcat 31078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 37934745 - 37934837
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||| | || ||||||||| |||||| ||| || ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  37934745 tagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttcat 37934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 23964269 - 23964359
Alignment:
Q  186 agatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| || | |||||| | |||||||||| ||||||||||||| |||||||    
T  23964269 agatatcaagaatgattttat-aagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcat 23964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 7744916 - 7744999
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||  |||| |||||||| |||||||||| |||||||||||||    
T  7744916 tagatatcaagaatgattttat-aagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaa 7744999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 33530488 - 33530579
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| || ||| ||  |||||||||||| |||| |||||||| |||||||||||||| ||||||||| |||||||    
T  33530488 tagatatcaagaatgattttataaa-aaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcat 33530579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 7745165 - 7745100
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  7745165 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 33530741 - 33530676
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||||||||||| |||||||||||| || | |||||||||||||||||    
T  33530741 atatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 4473076 - 4473126
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacaga 179  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  4473076 atgtaagcactctttgcctctaataaaaaggtgcttacatatagggacaga 4473126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 44744690 - 44744607
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacct 272  Q
    |||||||||| ||||||||||||||||    || |||||||||||||| || |||| | |||||||||||||||| ||||||||||||    
T  44744690 tagatatcaaaaatgattttatcaaga----ttcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacct 44744607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 10442842 - 10442777
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  10442842 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 23964518 - 23964453
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| || | |||||||||||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 23964453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 31078872 - 31078807
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  31078872 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 32564847 - 32564904
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  32564847 atgtaagcactctttgcctctaataaaagggtgcttacatatagggacggagggagta 32564904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 36073276 - 36073349
Alignment:
Q  196 aatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    |||||||||||||||||| |||||||||||| ||| || | |||| || ||||||||||||||| |||||||||    
T  36073276 aatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 42671681 - 42671746
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||| || ||||||||||| |||||||||||||||||||| || | |||||||||||||||||    
T  42671681 atatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattt 42671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 49387941 - 49387876
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  49387941 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 2624849 - 2624914
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||| ||| || | |||||||||||||||||    
T  2624849 atatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 21802375 - 21802310
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  ||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  21802375 atatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 22199273 - 22199338
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||| ||||||||||    
T  22199273 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 24392679 - 24392744
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| |||||||||||| |||||||||||| || | |||||||||||| ||||    
T  24392679 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 25063378 - 25063423
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatg 230  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  25063378 tagatatcaagaatgattttatcaagaaagattcaagaatgacatg 25063423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 36072959 - 36073024
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | ||| |||||||||||||    
T  36072959 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 47290078 - 47290143
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||||||||||||||    
T  47290078 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 50156631 - 50156566
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||| ||||||||| ||||||||||||||| || | |||||||||||||||||    
T  50156631 atattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 50156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 36073795 - 36073731
Alignment:
Q  189 tatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||| | |||||||  ||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 4751458 - 4751523
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |  |||||||||||| || | ||| |||||||||||||    
T  4751458 atatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 4751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 7209115 - 7209058
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||| |||||  |||||||||||| ||||||| |||||||||| |||||||||    
T  7209115 atgtaagcactctttgtctctaataaaaaagtgcttagatatagggactgagggagta 7209058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 24128251 - 24128316
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||| ||||||||||    
T  24128251 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 24128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 36073362 - 36073427
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||||||||| ||||    
T  36073362 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattt 36073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 44893438 - 44893503
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| |||| |||| || |||||||||||| || | |||||||||||||||||    
T  44893438 atatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 46441856 - 46441921
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| | ||||||| || |||||||||||| || | |||||||||||||||||    
T  46441856 atatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 44893267 - 44893201
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaattt-aagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||| |||| |||||||| |||||||||||| || | |||||||||||||||||    
T  44893267 atattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 53123042 - 53123108
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaattt-aagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||  ||||||| |||||||||||| || | |||||||||||||||||    
T  53123042 atatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 9088898 - 9088947
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||| || |||||||||||| || | |||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 9088947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 53998988 - 53999016
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaa 213  Q
    |||||||||||||||||||||||||||||    
T  53998988 tagatatcaagaatgattttatcaagaaa 53999016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 9293379 - 9293470
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  9293379 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcat 9293470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 10662149 - 10662058
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  10662149 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 10662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 23267866 - 23267957
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  23267866 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 23267957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 22592974 - 22592880
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttaga--tttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||    
T  22592974 tagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctttcat 22592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 33380468 - 33380377
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  33380468 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 33380377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 35161020 - 35160929
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  35161020 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 35160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  197 atgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 7475312 - 7475403
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||| | |||||||| |||||||||||||||||||||||| |||||||    
T  7475312 tagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctttcat 7475403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 9723668 - 9723576
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||| |||||||||||||| ||||||| || ||||||    
T  9723668 tagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttttcat 9723576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 3989337 - 3989246
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  3989337 tagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcat 3989246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 16767285 - 16767357
Alignment:
Q  205 atcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16767285 atcaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcat 16767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 21393490 - 21393570
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  21393490 tagatatcaagaatgattt-atcaagaaaa-ttcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt 21393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 13355109 - 13355018
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||||    
T  13355109 tagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcat 13355018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 31174639 - 31174730
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||| | || |||||||||| ||||||||||||| |||||||    
T  31174639 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcat 31174730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 37335953 - 37335893
Alignment:
Q  19 aattatgcttgcttacgtaagagacaaaacacaaggactatgctaatgcaattgaaagcat 79  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37335953 aattatgcttgcttacgtaagagacaaaacacgaggactatgctaatgcaattcaaagcat 37335893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 43331173 - 43331092
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  43331173 tagatatcaagaatgattt-atcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttatt 43331092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 10661899 - 10661964
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  10661899 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 35160769 - 35160834
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  35160769 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 14941201 - 14941259
Alignment:
Q  219 aagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||    
T  14941201 aagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcat 14941259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 34320994 - 34321042
Alignment:
Q  219 aagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  34320994 aagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 21936310 - 21936252
Alignment:
Q  219 aagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||||||| |||||||    
T  21936310 aagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcat 21936252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 7475561 - 7475496
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || ||||||||||||| | | |||||||||||||||||    
T  7475561 atatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattt 7475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 9293629 - 9293564
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||  || |||||||||||| || | |||||||||||||||||    
T  9293629 atatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 9723417 - 9723482
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||||| |||||| ||||||||||||||||||| | |||||||||||| ||||    
T  9723417 atattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 14941419 - 14941354
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||| |||||| ||| |||||||||||| || | |||||||||||||||||    
T  14941419 atatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 21393741 - 21393676
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  ||||| |||||||||||||||||||||||||  | | |||||||||||||||||    
T  21393741 atatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattt 21393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 21936093 - 21936158
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||| ||| || | |||||||||||||||||    
T  21936093 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 23268115 - 23268050
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||||||||||||||    
T  23268115 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 31174887 - 31174822
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||| ||||||| || |||||||||||| || | |||||||||||||||||    
T  31174887 atatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 33380219 - 33380284
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| |  | |||||||||||||||||    
T  33380219 atatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattt 33380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 43330924 - 43330989
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| |||| ||||||| |||||||||||| || | |||||||||||||||||    
T  43330924 atatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 9154164 - 9154210
Alignment:
Q  140 cttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||    
T  9154164 cttttcctctaataaaagggtgcttagatatagggacggagggagta 9154210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 3989104 - 3989153
Alignment:
Q  204 tatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||| ||||||||||||||| || | |||||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3989153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 12457075 - 12457018
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||  |||| |||||||||||| |||||||| |||||||||| |||||||||    
T  12457075 atgtaagcaccctttgcctctaataaaagggtgcttagatatagggacggagggagta 12457018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 13354858 - 13354923
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||| ||| || | |||| ||||||||||||    
T  13354858 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 13354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 27847644 - 27847709
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||||| |||||| ||| ||||||||||||||| | |||||||| ||||||||    
T  27847644 atataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 33810662 - 33810617
Alignment:
Q  141 ttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||    
T  33810662 ttttcctctaataaaagggtgcttacatatagggacgaagggagta 33810617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 36887339 - 36887396
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||| | ||||||| |||||||| |||| |||||||||||||| |||||||||    
T  36887339 atgtaagcatttttttcctataataaaatggtgtttacatatagggacggagggagta 36887396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 41877612 - 41877555
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||| ||||||| ||||||||||  ||||||| ||||||||||| ||||||||    
T  41877612 atgtaagcactcttttcttctaataaaagtgtgcttagatatagggacaaagggagta 41877555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 12890310 - 12890265
Alignment:
Q  141 ttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||||||||| | |||||| |||||||||| |||||||||    
T  12890310 ttttcctctaataaaaggatgcttagatatagggacggagggagta 12890265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 12457065 - 12457093
Alignment:
Q  158 ggtgcttacatatagggacagagggagta 186  Q
    |||||||||||||||||||||||||||||    
T  12457065 ggtgcttacatatagggacagagggagta 12457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 6e-31; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 37821638 - 37821729
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  37821638 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 37821729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 25973668 - 25973577
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||    
T  25973668 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttcat 25973577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 51737766 - 51737675
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  51737766 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 51737675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 19015662 - 19015574
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  19015662 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 19015574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 18404709 - 18404618
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||||    
T  18404709 tagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcat 18404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 36966512 - 36966603
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  36966512 tagatatcaagaatgattttat-aagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 36966603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 41876246 - 41876337
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||  |||| |||||||| |||||||||||||||||||||||| |||||||    
T  41876246 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 41876337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 32000070 - 32000151
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  32000070 tagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 32000151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 33786435 - 33786516
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  33786435 tagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 33786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 40273969 - 40273888
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttatt 267  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  40273969 tagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 6883748 - 6883657
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| || | || ||||| |||||||||||||||||||||||| |||||||    
T  6883748 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttcat 6883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 9910095 - 9910186
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| ||||||||||| || ||||||||| |||||||    
T  9910095 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttcat 9910186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 20304934 - 20305025
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| ||||||||||||||||||||| || |||||||    
T  20304934 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttcat 20305025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 40215249 - 40215166
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  40215249 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 40215166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 44094958 - 44094867
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||| ||||||| |||||| ||  ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  44094958 tagatatcaagaattattttat-aagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 44094867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 44690825 - 44690914
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaaccttt 274  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||| || | |||||||||||||||| |||||| ||||||||| ||||    
T  44690825 tagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttt 44690914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 3559878 - 3559787
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||| |||||||| |||||||| ||| |||||||||||||||||||| |||||||    
T  3559878 tagatatcaagaatgattttat-aagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttcat 3559787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 25463937 - 25463846
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| |||| |||||||| |||||||| ||||||||||||||| |||||||    
T  25463937 tagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttcat 25463846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 19722903 - 19722970
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||||| ||||||||    
T  19722903 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 40273711 - 40273779
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||| || | |||||||||||||||||    
T  40273711 tagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 27523306 - 27523243
Alignment:
Q  190 atcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||  |||||||||||||||||||||||||||||||||| | |||||||||||| ||||    
T  27523306 atcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatcacccttaaattt 27523243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 10167658 - 10167577
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaa 269  Q
    |||| |||||||||||||| || ||| |||||||||| | |||| ||| |||||||| |||||||||||||| |||||||||    
T  10167658 atattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaa 10167577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 16045851 - 16045786
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  16045851 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25463688 - 25463753
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || | |||||||||||||||||    
T  25463688 atatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 27523062 - 27523151
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||||||| ||| ||||||   ||| || | ||||||||||| ||||| ||||| |||||||||| ||||||    
T  27523062 atatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttcat 27523151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 32000320 - 32000255
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||| | ||| |||||||||||||    
T  32000320 atatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattt 32000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 40215000 - 40215065
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  40215000 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 33786690 - 33786623
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||||||||||| ||||    
T  33786690 tagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 52064381 - 52064445
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttag 249  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||| | || ||||||||||    
T  52064381 tagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3559629 - 3559694
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| || | |||||||||||| ||||    
T  3559629 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattt 3559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 18404454 - 18404519
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| |||||||||||||||  | | |||||||| ||||||||    
T  18404454 atatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 44094710 - 44094775
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||||  ||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  44094710 atatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 9910346 - 9910281
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||||||| || | |||||| ||||||||||    
T  9910346 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattt 9910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 19015416 - 19015481
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||| ||| || | |||||||||||||||||    
T  19015416 atatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 19015481  T

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Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 36966761 - 36966696
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||| ||| || | |||||||||||||||||    
T  36966761 atatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 36966696  T

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Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37821887 - 37821822
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| || |||||||| ||| || | |||||||||||||||||    
T  37821887 atatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 37821822  T

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Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 41876495 - 41876434
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttag 249  Q
    |||||||||| |||||| |||| |||| ||||||||||||||| || | |||||||||||||    
T  41876495 atatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttag 41876434  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 52329503 - 52329445
Alignment:
Q  219 aagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||  || | ||||||||||||||||||||||| | |||||||| ||||||    
T  52329503 aagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcat 52329445  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6883499 - 6883564
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||| ||||| |||||| | ||||||| || |||||||||||| || | |||||||||||||||||    
T  6883499 atattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25973426 - 25973490
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||| ||||| || |||||||||| | || | |||||||||||||||||    
T  25973426 atatcaagaaagattttatcatgaaaatttcaagaatgacagg-cagaataatcacccttagattt 25973490  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 7255168 - 7255208
Alignment:
Q  145 cctctaataaaaaggtgcttacatatagggacagagggagt 185  Q
    |||||||||||| |||||||||||||||| || ||||||||    
T  7255168 cctctaataaaagggtgcttacatataggaacggagggagt 7255208  T

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Target: scaffold0228 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 26197 - 26106
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  26197 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 26106  T

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Target: scaffold0228; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 16245 - 16154
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||| | |||||||||||||||||||||||| |||||||    
T  16245 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcat 16154  T

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Target: scaffold0228; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 8414 - 8479
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 15996 - 16061
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25948 - 26013
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

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Target: scaffold0204 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 4657 - 4566
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  4657 tagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcat 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 4408 - 4473
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| || | |||||||||||||||||    
T  4408 atatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 48110 - 48019
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||  |||| |||||| | |||||||||||||||||||||||| |||||||    
T  48110 tagatatcaagaatgattttat-aagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctttcat 48019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 47863 - 47927
Alignment:
Q  189 tatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    ||||||||| |||||||||||||||| || |||||||||||| || | |||||||||||||||||    
T  47863 tatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 41271 - 41180
Alignment:
Q  185 tagatatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagatttcagtctcatttattaacctttcat 277  Q
    |||||||||||||||||||||| |||||| ||  |||||||| |||  ||| |||||||| |||||||||||||||||||||||| |||||||    
T  41271 tagatatcaagaatgattttat-aagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttcat 41180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 41023 - 41088
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| || |||||||||||| || | |||||||||||||||||    
T  41023 atatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3080 - 3145
Alignment:
Q  188 atatcaagaatgattttatcaagaaaaatttaagaatgacatgacacagtaatcacccttagattt 253  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| || | |||||||||||||||||    
T  3080 atatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 504626 - 504665
Alignment:
Q  146 ctctaataaaaaggtgcttacatatagggacagagggagt 185  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  504626 ctctaataaaaaggtgcttacatatagggacggagggagt 504665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 143408 - 143351
Alignment:
Q  129 atgtaagcaatcttttcctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||  |||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  143408 atgtaagcatcctttgcctctaataaaagggtgtttacatatagggacagaggaagta 143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 59434 - 59475
Alignment:
Q  145 cctctaataaaaaggtgcttacatatagggacagagggagta 186  Q
    |||||||||||| ||||||||||||||||||  |||||||||    
T  59434 cctctaataaaagggtgcttacatatagggatggagggagta 59475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 13405 - 13373
Alignment:
Q  154 aaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||||||||||||||||| |||||||||    
T  13405 aaaaggtgcttacatatagggacggagggagta 13373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 92033 - 92001
Alignment:
Q  154 aaaaggtgcttacatatagggacagagggagta 186  Q
    ||||||||||||||||||||||| |||||||||    
T  92033 aaaaggtgcttacatatagggacggagggagta 92001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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