View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3279-Insertion-6 (Length: 431)
Name: NF3279-Insertion-6
Description: NF3279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3279-Insertion-6 |
 | |
|
| [»] chr5 (21 HSPs) |
| |
|
| [»] chr4 (2 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 8 - 431
Target Start/End: Original strand, 30434799 - 30435219
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
30434799 |
cacggaaggtagagattgacctcagtaactcattgttacgtccatcgacaccgaggtctttaagagatggaagacatggcagtccaagtttagggcattt |
30434898 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| | ||||||||||| | |
|
|
| T |
30434899 |
ccagatatccaaactagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaacccatgtaattcgagtacctccaaa |
30434998 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |
|
|
| T |
30434999 |
gatgggaaagccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatatactctaagtttttttagagatg--- |
30435095 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
30435096 |
gtagtttaccaaataacggaagccgcacaattttgttgcaatccccaagtttaagagaaattaaattactaagaataattatccaacttggtaacgataa |
30435195 |
T |
|
| Q |
408 |
tccgtcatagcaatttatatccaa |
431 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
30435196 |
tccgtcatagcaatttatatccaa |
30435219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 8 - 424
Target Start/End: Complemental strand, 30339651 - 30339238
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30339651 |
cacggaaggtagagattgacctcagtaactcattgttacatccctcaacatagaggtctttaagagatggaagacatggcagtccaattttagggcaata |
30339552 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| | ||||||||||||| |
|
|
| T |
30339551 |
ggagattgtcaagttagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcgttgtaagtagagtacctccaga |
30339452 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||| |
|
|
| T |
30339451 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcatacgatatactctaagattttttagagatg--- |
30339355 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||| | ||| | ||||||||||||||||||| ||| |||||||||| ||||||||||| |
|
|
| T |
30339354 |
gtagtttaccaagtaactgaagcagcacaattttgttgcaattccaaagattaagagaaattaaattactaagaaggcttatccaacttggtaacgataa |
30339255 |
T |
|
| Q |
408 |
tccgtcatagcaattta |
424 |
Q |
| |
|
||| |||||| |||||| |
|
|
| T |
30339254 |
tccttcatagaaattta |
30339238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 8 - 425
Target Start/End: Original strand, 30748620 - 30749034
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | | | |||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30748620 |
cacggaaggtagagattgacctcagtaactcattgttacattcccataaatggagggatttaagagatggaagacatggcagtccaagttcagggcaatc |
30748719 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| | |||| |||| ||| |
|
|
| T |
30748720 |
ccagatatccaacttagaaagacaaggaaacatctcccctctttccactttcaataatccctctatgtttggtagggattttaagttgagttcctctaga |
30748819 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
30748820 |
gatgggaaaacgctcacctccataccatactcagattcatcatcatccaagtatttcagattattcataccatataatcttagtttttttagagatg--- |
30748916 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
30748917 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaaatctcaagttcaagagaaattaaattactaagaataattatccaacttggtaacgataa |
30749016 |
T |
|
| Q |
408 |
tccgtcatagcaatttat |
425 |
Q |
| |
|
||| |||||| ||||||| |
|
|
| T |
30749017 |
tccttcatagtaatttat |
30749034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 425
Target Start/End: Original strand, 30399042 - 30399456
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
30399042 |
cacggaaggtagagattgacctcagtaactcattgttacatcccaatacatagagggatttaagagatggaagacatggcactccaagtttagggcaagc |
30399141 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30399142 |
tgtgattctcaactcagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagttcctccaga |
30399241 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| || ||||| ||| ||||| | |
|
|
| T |
30399242 |
gatgggaaaaccctcacctccacaccatcctgagattcatcatcatccaagtatttcagattatccatatcagataattccagtttttttagagacg--- |
30399338 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
|||||||||||| |||| |||| ||||||| ||| ||||||| | ||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||| |
|
|
| T |
30399339 |
gtagtttaccaattaactgaagtcgcacaactttcttgcaattcccaagttcaagagaaactaaattactaagaataattatccaacttggtaatgataa |
30399438 |
T |
|
| Q |
408 |
tccgtcatagcaatttat |
425 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
30399439 |
tccgtcatagtaatttat |
30399456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 417
Target Start/End: Complemental strand, 30243498 - 30243092
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
30243498 |
cacggaaggtagagattgacctcagtaactcattgttacattcccatacaaagaggtctttaagagatggaagacatggcagtccaagtttagggcattt |
30243399 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||| |
|
|
| T |
30243398 |
ccagatatccaaactagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtagacaagataattggagtacctctaga |
30243299 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||| ||| ||| |
|
|
| T |
30243298 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattatccatttcgaataattccagtttttttagatatg--- |
30243202 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||| |
|
|
| T |
30243201 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaattccgaagttcaagagaaattaaattactaagaagaattatccaacttggtaaggataa |
30243102 |
T |
|
| Q |
408 |
tccgtcatag |
417 |
Q |
| |
|
||| |||||| |
|
|
| T |
30243101 |
tccctcatag |
30243092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 8 - 425
Target Start/End: Complemental strand, 30678297 - 30677880
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaag---tttagggca |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30678297 |
cacggaaggtagagattgacctcagtaactcattgttacatccccatatctcgagttctttaagagatggaagacatggcagtccaagcagtttagggca |
30678198 |
T |
|
| Q |
105 |
atcgatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctcc |
204 |
Q |
| |
|
|| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| |||| |
|
|
| T |
30678197 |
attccagatatccaacctagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtagagaatctaataagagtttctcc |
30678098 |
T |
|
| Q |
205 |
agagatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatg |
304 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| |
|
|
| T |
30678097 |
agagatgggaaaaccctcaccttcataccatcctcagattcatcatcatccaagtatttcagattattcatacgagataatctcagtctttttagagatg |
30677998 |
T |
|
| Q |
305 |
gtagtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacga |
404 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
30677997 |
---gtagtttaccacgtaacggaagccgcacaattttgttgcattcctcaagttcaagagaaattaaattactaagaataattatccaacttggtaacga |
30677901 |
T |
|
| Q |
405 |
taatccgtcatagcaatttat |
425 |
Q |
| |
|
||||| |||||| ||||||| |
|
|
| T |
30677900 |
taatctttcatagtaatttat |
30677880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 425
Target Start/End: Original strand, 29871168 - 29871577
Alignment:
| Q |
13 |
aaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatga |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| ||||||||| | | |
|
|
| T |
29871168 |
aaggtagagattgacctcagtaactcattgttacatggatcggcaacgaggtctttaagagatggaagacatggcagtccaattttagggcatttccaaa |
29871267 |
T |
|
| Q |
113 |
ttgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggc-atagtaaatggagtacctccagagatg |
211 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| ||| |||| |||||||||||| |
|
|
| T |
29871268 |
tatccaaactagaaagacaaggaaacatctcccctctttcaactttcaataaaccctctatgtttggtaacttata-taatacgagttcctccagagatg |
29871366 |
T |
|
| Q |
212 |
ggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggtagtag |
311 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||| ||| ||||||||||| |
|
|
| T |
29871367 |
ggaaaatcctcacctccataccatcctgagattcatcatcatccaagtatttcagattatccatataagataattccagtttttttagagatggtag--- |
29871463 |
T |
|
| Q |
312 |
tttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataatccg |
411 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
29871464 |
tttaccaagtaacggaagccgcacaatcttgttgcaatcctcaagtttaagagaaattaaattactaagaataattatccaacttggtaacgataatcct |
29871563 |
T |
|
| Q |
412 |
tcatagcaatttat |
425 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
29871564 |
tcatagtaatttat |
29871577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 60 - 425
Target Start/End: Complemental strand, 30714508 - 30714146
Alignment:
| Q |
60 |
gaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgat-gattgacaaattagaaagacaaggaaacatctcccctctttccacttt |
158 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| | || |||| ||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30714508 |
gaggtctttaagagatggaagacatggcagtccaagtttagggcaa-caatcgattaccaatttagaaagagaaggaaacatctcccctctttccacttt |
30714410 |
T |
|
| Q |
159 |
caataacccctctatgtttggtaggcatagtaaatggagtacctccagagatgggaaaaccctcacctccataccatcctcagattcatcatcatccaag |
258 |
Q |
| |
|
|||||||||| |||||||| |||| || ||| | ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30714409 |
caataaccccactatgtttcgtagacaagataattcgagtatctccagagaggggaaaaccctcacctccataccatcctcagattcatcatcatccaag |
30714310 |
T |
|
| Q |
259 |
tatttcagattattcataccatataatctcagnnnnnnnagagatggtagtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagtt |
358 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
30714309 |
tatttcagattattgataccatataatctcagtttttttagagatg---gtagtttaccaagtaacggaagccgcacaattttcttgcaatggagaagta |
30714213 |
T |
|
| Q |
359 |
caagagaaattaaattactaggaataattatccaactgggtaacgataatccgtcatagcaatttat |
425 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||| ||||| |||||||| |||||| ||||||| |
|
|
| T |
30714212 |
caagagaaactaaattactaagaataattatccaacttggtaatgataatccttcatagtaatttat |
30714146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 425
Target Start/End: Original strand, 30482381 - 30482795
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
30482381 |
cacggaaggtagagattgacctcagtaactcattgttacatccatccacatagaggccttcaagagatggaagagatggcagtccaagtttatggcaata |
30482480 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
|||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| || |||| |
|
|
| T |
30482481 |
tgagatttccaagtaagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttcgtaggtatcgtaaatggagatccatcaga |
30482580 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| | ||||| ||| ||||||| |
|
|
| T |
30482581 |
gatcggaaaaccatcacctccacaccatcctgagattcatcatcatccaagtatttcagattatccatataagataattccagtttttttagagatg--- |
30482677 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||||| ||||||||||| |
|
|
| T |
30482678 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaattccgaagttcaagagaaattaaattactaagaaggcttatccaacttggtaacgataa |
30482777 |
T |
|
| Q |
408 |
tccgtcatagcaatttat |
425 |
Q |
| |
|
|| |||| | ||||||| |
|
|
| T |
30482778 |
cccttcattgtaatttat |
30482795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 431
Target Start/End: Original strand, 29852276 - 29852696
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29852276 |
cacggaaggtagagattgacctcagtaactcattgttacatcccaatacatggagcagtttcagagatggaagacatggcagtccaagttcagggcaata |
29852375 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
|||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| | |||| | |||| ||||||| |
|
|
| T |
29852376 |
tgagattttcaaattagaaagacaaggaaatatcttccctctttccactttcaataacccctctatgtttcgtaggcgttgtaatagaagtatctccaga |
29852475 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| || ||| ||| |
|
|
| T |
29852476 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatctaagtatttcagattatccattttgaataataccaacttttttagatatg--- |
29852572 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||| |||||||||| ||||||||||| |
|
|
| T |
29852573 |
gtagtttacaaagtaacggaagccgcacaattttgttgcaattccgaagttcaagagaaattaaactactaagaaggcttatccaacttggtaacgataa |
29852672 |
T |
|
| Q |
408 |
tccgtcatagcaatttatatccaa |
431 |
Q |
| |
|
||| |||||| ||||||| ||||| |
|
|
| T |
29852673 |
tccttcatagtaatttatgtccaa |
29852696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 8 - 378
Target Start/End: Original strand, 4380635 - 4381002
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4380635 |
cacgaaaggtagagattgacctcagtaactcattgttacatccctcaacaacgaggtgtttaagagatggatgacatggcagtccaagtttagggcaatt |
4380734 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || ||| | ||||||||||||| |
|
|
| T |
4380735 |
ctagatatccaagttagaaagacaaggaaacaactcccctctttccactttcaataacccctttatgtttggtagacaatataattcgagtacctccaga |
4380834 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| | ||||| || ||||||| |
|
|
| T |
4380835 |
gatgggaaaaccctcacctccataccatcctcaaattcatcatcatccaagtatttcagattatccgtacgaaataattccaatttttttagagatg--- |
4380931 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactc-aagttcaagagaaattaaattacta |
378 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| || | ||||| ||||||||||||||||||| |
|
|
| T |
4380932 |
ttagtttaccaagtgacggaagccgcacaactttgttgcaa-acacaaagtttaagagaaattaaattacta |
4381002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 8 - 417
Target Start/End: Original strand, 30059334 - 30059740
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||| |||| || |
|
|
| T |
30059334 |
cacggaaggtagagattgacctcagtaactcattgttacattccgatacagtgagggatttaagagatggaagacatggcagtccaagtttacggcattc |
30059433 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggc-atagtaaatggagtacctccag |
206 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |||| ||||||| |
|
|
| T |
30059434 |
agagatatccaacttagaaagacaaggaaacatctcccctctttccactttcaataaaccctctatgtttggtaactgata-taatacgagttcctccag |
30059532 |
T |
|
| Q |
207 |
agatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggt |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||| | ||||||| |
|
|
| T |
30059533 |
agatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattatccatataagataattccaggttttttaaagatggt |
30059632 |
T |
|
| Q |
307 |
agtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgata |
406 |
Q |
| |
|
|||| ||||||||||| |||||||||||| ||| || ||| || ||||| |||||||| |||||||||| |||||||||||||||| || || |||| |
|
|
| T |
30059633 |
agta---taccaagtaactgaagccgcacaactttcttacaacgcttaagtttaagagaaactaaattactaagaataattatccaacttggcaaggata |
30059729 |
T |
|
| Q |
407 |
atccgtcatag |
417 |
Q |
| |
|
|||| |||||| |
|
|
| T |
30059730 |
atccctcatag |
30059740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 276
Target Start/End: Original strand, 30205496 - 30205758
Alignment:
| Q |
17 |
tagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgattga |
116 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| | |||| |||||||||| |||||||||||||||||||||||||||| | ||| | |
|
|
| T |
30205496 |
tagagattgacctcagcaactcattgttacatcccaatacatctaggtttttaagagatacaagacatggcagtccaagtttagggcaaaaggagatggt |
30205595 |
T |
|
| Q |
117 |
caaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccagagatgggaaa |
216 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| | ||| |||||||||||||||||||||| |
|
|
| T |
30205596 |
taaacgagaaagacaaggaaacatctcacctctttccactttcaataacccttctaagtttggtaggatttctaatatgagtacctccagagatgggaaa |
30205695 |
T |
|
| Q |
217 |
accctcacctccataccatcctcaga---ttcatcatcatccaagtatttcagattattcata |
276 |
Q |
| |
|
| |||| || | |||||||| | ||| ||||||||||||||||||||||| || ||||||| |
|
|
| T |
30205696 |
atcctcgccacaataccatcttgagattcttcatcatcatccaagtatttcaaatcattcata |
30205758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 29710029 - 29709864
Alignment:
| Q |
14 |
aggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgat |
113 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||| |||| ||||||||| | | | || |
|
|
| T |
29710029 |
aggtagagattgatctcagtaactcattgttacatcccgaaacatcgaggtctataagagacggaagacatgacagttcaagtttagtgaagagggcaat |
29709930 |
T |
|
| Q |
114 |
tgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttgg |
179 |
Q |
| |
|
| |||| ||||| |||||||||||| |||| |||||||||| |||| ||||||||||| |||||| |
|
|
| T |
29709929 |
tttcaaaatagaaggacaaggaaacacctcctctctttccacattcactaacccctctaagtttgg |
29709864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 30474363 - 30474473
Alignment:
| Q |
19 |
gagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgattgaca |
118 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||||| |||||||||||||||| || || | || |
|
|
| T |
30474363 |
gagattgatctcagtaactcattgttacatccaaatacaatgaggtctttaagggatggaaggcatggcaacacaagtttagggcaatcaataatggtca |
30474462 |
T |
|
| Q |
119 |
aattagaaaga |
129 |
Q |
| |
|
||||||||||| |
|
|
| T |
30474463 |
aattagaaaga |
30474473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 30203131 - 30203280
Alignment:
| Q |
12 |
gaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatg |
111 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| |||| ||| |||| ||||| | |||||||||||| |||| |||||||||| || | | |
|
|
| T |
30203131 |
gaagctagagatcgacctcagtaactcattgttacattcatttacataaaggtttttaacatatggaagacatgacagttgaagtttagggtaaaaggcg |
30203230 |
T |
|
| Q |
112 |
attgacaaattagaaagacaaggaaacatctcccctctttccactttcaa |
161 |
Q |
| |
|
|| ||| | | |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30203231 |
atatccaattgaaaaagacaaggaaacatctcctctctttccactttcaa |
30203280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 30522748 - 30522599
Alignment:
| Q |
17 |
tagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgattga |
116 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||| |||| ||| ||||||| |||| ||| ||||| ||||||||||||||| | | ||| | |
|
|
| T |
30522748 |
tagagattgactccagcaactcattgttacatccatctacaatgagttctttaaacgatgaaaggtgtggcaacccaagtttagggcaaccaacgatggc |
30522649 |
T |
|
| Q |
117 |
caaattagaaagacaaggaaacatctcccctctttccactttcaataacc |
166 |
Q |
| |
|
||| |||||||| | ||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
30522648 |
caacttagaaaggcggggaaaaatctcccctgtttccactttcaacaacc |
30522599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 30563088 - 30562939
Alignment:
| Q |
17 |
tagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgattga |
116 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||| |||| ||| ||||||| |||| ||| ||||| ||||||||||||||| | | ||| | |
|
|
| T |
30563088 |
tagagattgactccagcaactcattgttacatccatctacaatgagttctttaaacgatgaaaggtgtggcaacccaagtttagggcaaccaacgatggc |
30562989 |
T |
|
| Q |
117 |
caaattagaaagacaaggaaacatctcccctctttccactttcaataacc |
166 |
Q |
| |
|
||| |||||||| | ||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
30562988 |
caacttagaaaggcggggaaaaatctcccctgtttccactttcaacaacc |
30562939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 30429934 - 30430022
Alignment:
| Q |
17 |
tagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaa |
105 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||| ||| ||||||| ||||| ||| ||||||| ||||||||| ||||| |
|
|
| T |
30429934 |
tagagattgactccagtaactcattgttacatccatctacaatgagttctttaaaagatgaaaggcatggcaacccaagtttaaggcaa |
30430022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 17982082 - 17982152
Alignment:
| Q |
195 |
gagtacctccagagatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttca |
265 |
Q |
| |
|
||||| |||||||||||||||| ||| ||||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
17982082 |
gagtatctccagagatgggaaatttatcatctccacaccattttcaaattcatcatcatccaagtatttca |
17982152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 30203318 - 30203372
Alignment:
| Q |
198 |
tacctccagagatgggaaaaccctcacctccataccatcctcagattcatcatca |
252 |
Q |
| |
|
|||||||| | ||||||||| ||||||||||||||||| | ||||||||||||| |
|
|
| T |
30203318 |
tacctccaaatatgggaaaatcctcacctccataccattgtgagattcatcatca |
30203372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 8 - 431
Target Start/End: Complemental strand, 20297729 - 20297309
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||| || |||| ||||| ||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
20297729 |
cacggaaagtagagattgatctcagtaactcattgttacatggatcgacatcgagggatttaagagatggaagacatggcattccaagtttagggcattt |
20297630 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccaga |
207 |
Q |
| |
|
| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | ||| | ||||||||||||| |
|
|
| T |
20297629 |
ggagattttcaacttagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgttttgtagacaaaataagtcgagtacctccaga |
20297530 |
T |
|
| Q |
208 |
gatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggta |
307 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| ||| | |||| ||||||| |
|
|
| T |
20297529 |
gatgggaaaaccctcacctccctaccatcccgagattcatcatcatccaagtatttcagattatacataccagatattgtcagtttttttagagatg--- |
20297433 |
T |
|
| Q |
308 |
gtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgataa |
407 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| |||||||| ||||||||||| ||||| |||||||||| |||||||||||||||| |||||| | || |
|
|
| T |
20297432 |
gtagtttaccaattaacggaagctgcacaatttcgttgcaattctcaagttcaaaagaaactaaattactaagaataattatccaacttggtaaccacaa |
20297333 |
T |
|
| Q |
408 |
tccgtcatagcaatttatatccaa |
431 |
Q |
| |
|
||| |||||||||||||| ||||| |
|
|
| T |
20297332 |
tccatcatagcaatttatttccaa |
20297309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 52350946 - 52351175
Alignment:
| Q |
17 |
tagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgattga |
116 |
Q |
| |
|
|||| |||| ||| ||||||| | ||||||||||| | |||| |||||||||||| |||||||| || ||| |||||||||||||| | || | |
|
|
| T |
52350946 |
tagatattggccttagtaactgactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggt |
52351045 |
T |
|
| Q |
117 |
caaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccagagatgggaaa |
216 |
Q |
| |
|
||||| |||||||| | |||||||||| ||||||| ||||||||||| || | |||||| | | |||||| || | ||||||||||||||| |
|
|
| T |
52351046 |
caaatcagaaagac---ggaacatctcccgcctttccattttcaataaccgttcaaagtttggcaaacctagtaatgagactttttccagagatgggaaa |
52351142 |
T |
|
| Q |
217 |
accctcacctccataccatcctcagattcatca |
249 |
Q |
| |
|
||||||||| ||| |||||| | |||||||||| |
|
|
| T |
52351143 |
accctcacccccacaccatcgtgagattcatca |
52351175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 178; Significance: 7e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 8 - 431
Target Start/End: Original strand, 26706309 - 26706729
Alignment:
| Q |
8 |
cacggaaggtagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatc |
107 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
26706309 |
cacgaaaggtagggattgacctcagtaactcattgttacatcccgaaacattgagggatttaagagatggaagacatggcagtcctagcttagggcaata |
26706408 |
T |
|
| Q |
108 |
gatgattgacaaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtagg-catagtaaatggagtacctccag |
206 |
Q |
| |
|
| |||| |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||| |
|
|
| T |
26706409 |
gtatattgtcaaacgagaaagacaaggaaacacctttcctctttccactttcaataacccctctatgtttggtaactcata-taagtggagtaccttcag |
26706507 |
T |
|
| Q |
207 |
agatgggaaaaccctcacctccataccatcctcagattcatcatcatccaagtatttcagattattcataccatataatctcagnnnnnnnagagatggt |
306 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| | ||||| ||| ||||||| |
|
|
| T |
26706508 |
agatgggaaaaccctcacctccatgccatcctgagattcatcatcatccaagtatttcagattaaccatagaagataattccagtttttctagagatg-- |
26706605 |
T |
|
| Q |
307 |
agtagtttaccaagtaacggaagccgcacaattttgttgcaatactcaagttcaagagaaattaaattactaggaataattatccaactgggtaacgata |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||| |||||||||| ||||| ||| |||||| ||||| |||| |
|
|
| T |
26706606 |
-gtagtttaccaagtaacggaagccgcacaaatttcttgcaatccccaagttcaagagaaactaaattactaagaatacttacccaacttggtaatgata |
26706704 |
T |
|
| Q |
407 |
atccgtcatagcaatttatatccaa |
431 |
Q |
| |
|
||||||| ||| | ||||| ||||| |
|
|
| T |
26706705 |
atccgtcgtagtactttatttccaa |
26706729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 265
Target Start/End: Complemental strand, 7582801 - 7582597
Alignment:
| Q |
61 |
aggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgattgacaaattagaaagacaaggaaacatctcccctctttccactttca |
160 |
Q |
| |
|
|||||||||| |||||||||||| || ||| ||||||||||||||| | |||| |||| ||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
7582801 |
aggtctttaacagatggaagacacggaagttcaagtttagggcaattgttgatgttcaaaatagaaagacaaggaaacatctcctttttttccactttca |
7582702 |
T |
|
| Q |
161 |
ataacccctctatgtttggt-aggcat--agtaaatggagtacctccagagatgggaaaaccctcacctccataccatcctcagattcatcatcatccaa |
257 |
Q |
| |
|
| |||||||||| ||||||| || ||| | || | |||||||| ||||||||||||| ||||| |||| ||||| | | |||||||||||||||| |
|
|
| T |
7582701 |
acaacccctctaagtttggtaagtcatcaattata---agtacctcaagagatgggaaaattctcacttccaaaccattgtgaaattcatcatcatccaa |
7582605 |
T |
|
| Q |
258 |
gtatttca |
265 |
Q |
| |
|
|||||||| |
|
|
| T |
7582604 |
gtatttca |
7582597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 265
Target Start/End: Original strand, 7098401 - 7098649
Alignment:
| Q |
17 |
tagagattgacctcagtaactcattgttacatccattgacaacgaggtctttaagagatggaagacatggcagtccaagtttagggcaatcgatgattga |
116 |
Q |
| |
|
||||||||||| |||| | || ||| |||||| ||| ||| ||||||| ||| |||||||||||| || ||| ||||||||||||||| | |||| |
|
|
| T |
7098401 |
tagagattgacttcagcatcttattattacattcatctacatagaggtctctaacagatggaagacacggaagttcaagtttagggcaattgtcgatttc |
7098500 |
T |
|
| Q |
117 |
caaattagaaagacaaggaaacatctcccctctttccactttcaataacccctctatgtttggtaggcatagtaaatggagtacctccagagatgggaaa |
216 |
Q |
| |
|
|||| ||||||||||||||||| |||| |||||||||||||||| | ||||||| |||||| | | |||| |||| ||| |||||||||||| |
|
|
| T |
7098501 |
caaaatagaaagacaaggaaacgtctcatctctttccactttcaacagtccctctaagtttggcatcccgcgtaacaagagtgtctctagagatgggaaa |
7098600 |
T |
|
| Q |
217 |
accctcacctccataccatcctcagattcatcatcatccaagtatttca |
265 |
Q |
| |
|
| ||| ||||||||||||| | | |||||| ||||||||||||||||| |
|
|
| T |
7098601 |
atccttacctccataccattgtgaaattcattatcatccaagtatttca |
7098649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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