View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3279_low_7 (Length: 204)
Name: NF3279_low_7
Description: NF3279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3279_low_7 |
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| [»] scaffold0007 (1 HSPs) |
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Alignment Details
Target: scaffold0007 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 148906 - 148851
Alignment:
| Q |
18 |
taaagttaaaaagaaaataatgttaaaagagggggtgatagatgacagtgatgttt |
73 |
Q |
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| T |
148906 |
taaagttaaaaagaaaataatgttaaaagagggggtgatagatgacagtgatgttt |
148851 |
T |
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