View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3282-Insertion-27 (Length: 219)
Name: NF3282-Insertion-27
Description: NF3282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3282-Insertion-27 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 50529962 - 50529767
Alignment:
| Q |
8 |
ggtgtctcttctgctaaatggaggatcaccgttccttcttttccggaagggtttaaccaaatcgacttggttgctgtcgttgttgttttactcatcacag |
107 |
Q |
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| T |
50529962 |
ggtgtctcttctgctaaatggaggatcaccgttccttcttttccggaagggtttaaccaaatcgacttggttgctgtcgttgttgttttactcatcacag |
50529863 |
T |
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| Q |
108 |
tggttatctgctacaggtttgtaactgatccttcttgatcaacat------ccaccattaagcacagtcacagacaacaaacacgatatgatacac |
197 |
Q |
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| T |
50529862 |
tggttatctgctacaggtttgtaactgatccttcttgatcaacatccacatccaccactaagcacagtcacagacaacaaacacgatatgatacac |
50529767 |
T |
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