View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3282-Insertion-32 (Length: 204)
Name: NF3282-Insertion-32
Description: NF3282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3282-Insertion-32 |
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Alignment Details
Target: chr5 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 41704328 - 41704462
Alignment:
| Q |
8 |
cctttgaccagtgacaacactatccattgttctatctttcattgatgaacaccatcaatgaaaccacaatttcttgcagtatcatataaatacgtaaaca |
107 |
Q |
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| T |
41704328 |
cctttgaccagtgacaacactatccattgttctatctttcattgatgaacaccatcaatgaaaccacaatttcttgcagtatcatataaataagtaaaca |
41704427 |
T |
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| Q |
108 |
tgtaaaataattgtcgatagacagcataaccagac |
142 |
Q |
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| T |
41704428 |
tgtaaaataattgtcgatagacagcataaccagac |
41704462 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 41704472 - 41704512
Alignment:
| Q |
164 |
agaggagccaataataacgttctttgtctttgtgcatggag |
204 |
Q |
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| T |
41704472 |
agaggagccaataataatgttctttgtctttgtgcatggag |
41704512 |
T |
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