View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3282-Insertion-33 (Length: 193)
Name: NF3282-Insertion-33
Description: NF3282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3282-Insertion-33 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 3713375 - 3713190
Alignment:
| Q |
8 |
ccaaacacctgcatgttctcttaaagatccccttctatcccatacaaaacctacatttaatgcaccttctattctaacattacatataactgaacctaga |
107 |
Q |
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| T |
3713375 |
ccaaacacctgcatgttctcttaaagatccccttctatcccatacaaaacctacatttaatgcaccttctattctaacattacatataactgaacctaga |
3713276 |
T |
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| Q |
108 |
cattcatacaaacattgagtctttattcttgttctgcattttatctcaacatggcttcacttcctcttcttctgctcctcatcctc |
193 |
Q |
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| T |
3713275 |
cattcatacaaacattgagtctttattattgttctgcattttatctcaacatggcttctcttcctcttcttctgctcctcatcctc |
3713190 |
T |
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