View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3282-Insertion-35 (Length: 166)
Name: NF3282-Insertion-35
Description: NF3282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3282-Insertion-35 |
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Alignment Details
Target: chr4 (Bit Score: 158; Significance: 2e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 158; E-Value: 2e-84
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 24186200 - 24186043
Alignment:
| Q |
8 |
agtagaagtagcagcagttgcagctggatgtgttgttttcctcgaaagtgaacgactcagcgtcttttctctagcttgttctaatccaagtttctcattg |
107 |
Q |
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| T |
24186200 |
agtagaagtagcagcagttgcagctggatgtgttgttttcctcgaaagtgaacgactcagcgtcttttctctagcttgttctaatccaagtttctcattg |
24186101 |
T |
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| Q |
108 |
tttgacagaacatgtgtctgtgggcttcttggactcattcttgaatgttgcctgacat |
165 |
Q |
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| T |
24186100 |
tttgacagaacatgtgtctgtgggcttcttggactcattcttgaatgttgcctgacat |
24186043 |
T |
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