View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3282-Insertion-9 (Length: 900)

Name: NF3282-Insertion-9
Description: NF3282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3282-Insertion-9
NF3282-Insertion-9
[»] chr4 (55 HSPs)
chr4 (223-900)||(22357098-22357772)
chr4 (346-817)||(14648880-14649343)
chr4 (358-777)||(19929364-19929777)
chr4 (345-789)||(19092279-19092715)
chr4 (356-777)||(17671997-17672401)
chr4 (346-822)||(5679190-5679659)
chr4 (8-140)||(22357768-22357900)
chr4 (363-777)||(13908856-13909264)
chr4 (356-554)||(12578176-12578370)
chr4 (654-776)||(22173241-22173363)
chr4 (346-559)||(17951201-17951410)
chr4 (346-559)||(17955053-17955262)
chr4 (347-528)||(11490518-11490695)
chr4 (425-742)||(8969455-8969760)
chr4 (410-750)||(17336850-17337188)
chr4 (363-877)||(7582299-7582807)
chr4 (497-742)||(19374538-19374778)
chr4 (503-690)||(19492487-19492673)
chr4 (345-462)||(13692670-13692784)
chr4 (358-522)||(22175904-22176064)
chr4 (465-750)||(24639178-24639458)
chr4 (346-458)||(9737509-9737623)
chr4 (674-777)||(3775116-3775219)
chr4 (506-557)||(20829645-20829696)
chr4 (356-559)||(13128777-13128978)
chr4 (346-556)||(21323784-21323989)
chr4 (480-559)||(15164880-15164960)
chr4 (363-462)||(19562179-19562275)
chr4 (346-743)||(25120952-25121339)
chr4 (359-460)||(13992879-13992977)
chr4 (723-789)||(17275908-17275974)
chr4 (424-539)||(19636510-19636625)
chr4 (346-462)||(19882625-19882738)
chr4 (614-738)||(9851170-9851295)
chr4 (705-742)||(17026007-17026044)
chr4 (363-462)||(19492701-19492797)
chr4 (356-750)||(40227772-40228158)
chr4 (346-397)||(9052659-9052710)
chr4 (704-743)||(17710104-17710143)
chr4 (502-559)||(19562079-19562137)
chr4 (654-755)||(23652014-23652116)
chr4 (349-444)||(11521210-11521302)
chr4 (634-730)||(17106858-17106954)
chr4 (704-743)||(11933838-11933877)
chr4 (356-445)||(15047123-15047209)
chr4 (356-445)||(15107215-15107301)
chr4 (704-743)||(15165188-15165227)
chr4 (366-536)||(17216822-17216991)
chr4 (705-743)||(8969371-8969409)
chr4 (479-536)||(16730328-16730386)
chr4 (705-743)||(17107011-17107049)
chr4 (704-741)||(11253418-11253455)
chr4 (503-559)||(13692585-13692642)
chr4 (363-462)||(20315002-20315098)
chr4 (675-731)||(25023979-25024036)
[»] chr7 (83 HSPs)
chr7 (346-782)||(7318258-7318687)
chr7 (378-822)||(17152795-17153236)
chr7 (356-774)||(10586720-10587128)
chr7 (346-826)||(3734581-3735053)
chr7 (356-783)||(15869590-15870010)
chr7 (346-724)||(9574392-9574761)
chr7 (424-789)||(3190739-3191098)
chr7 (356-782)||(6013588-6014004)
chr7 (367-729)||(8313137-8313488)
chr7 (600-743)||(4986825-4986968)
chr7 (600-743)||(4990923-4991066)
chr7 (484-777)||(16297532-16297813)
chr7 (363-667)||(5108568-5108864)
chr7 (497-743)||(7397274-7397516)
chr7 (475-755)||(9131019-9131297)
chr7 (363-681)||(16365707-16366020)
chr7 (486-754)||(17829691-17829953)
chr7 (519-739)||(39272902-39273121)
chr7 (363-737)||(18662443-18662806)
chr7 (363-522)||(4986557-4986713)
chr7 (363-522)||(4990655-4990811)
chr7 (356-729)||(9731364-9731731)
chr7 (379-667)||(4785854-4786140)
chr7 (363-743)||(8978728-8979103)
chr7 (356-559)||(3329561-3329762)
chr7 (379-667)||(4818854-4819141)
chr7 (694-857)||(1586289-1586452)
chr7 (479-559)||(7492167-7492248)
chr7 (363-462)||(10584487-10584583)
chr7 (363-536)||(2563820-2563989)
chr7 (681-824)||(18202853-18202996)
chr7 (503-559)||(19153434-19153490)
chr7 (503-559)||(20752833-20752889)
chr7 (480-739)||(1847956-1848213)
chr7 (614-699)||(1584445-1584530)
chr7 (346-538)||(1587666-1587856)
chr7 (356-435)||(2350775-2350851)
chr7 (658-750)||(10331595-10331688)
chr7 (372-557)||(10648589-10648770)
chr7 (346-475)||(1584530-1584654)
chr7 (363-492)||(8054457-8054586)
chr7 (360-462)||(13759861-13759960)
chr7 (628-743)||(21501522-21501638)
chr7 (467-538)||(1584335-1584405)
chr7 (574-647)||(4986740-4986810)
chr7 (574-647)||(4990838-4990908)
chr7 (357-437)||(10937598-10937675)
chr7 (506-646)||(16058851-16058991)
chr7 (356-462)||(9245176-9245279)
chr7 (356-462)||(9864327-9864430)
chr7 (363-545)||(11221083-11221261)
chr7 (696-743)||(9864052-9864099)
chr7 (704-743)||(17152790-17152829)
chr7 (504-559)||(18368883-18368938)
chr7 (356-445)||(23099970-23100056)
chr7 (346-462)||(5530006-5530119)
chr7 (705-743)||(8978644-8978682)
chr7 (346-462)||(18495358-18495471)
chr7 (705-778)||(10649615-10649688)
chr7 (507-690)||(11803211-11803393)
chr7 (345-545)||(31492914-31493107)
chr7 (603-683)||(1861150-1861230)
chr7 (503-620)||(6042589-6042701)
chr7 (356-514)||(12181603-12181759)
chr7 (384-462)||(18467474-18467549)
chr7 (699-754)||(1882588-1882643)
chr7 (704-743)||(3735015-3735054)
chr7 (363-436)||(8054085-8054155)
chr7 (357-462)||(9916562-9916664)
chr7 (357-462)||(9924474-9924576)
chr7 (704-743)||(13289087-13289126)
chr7 (498-537)||(14195898-14195937)
chr7 (704-743)||(16058675-16058714)
chr7 (346-393)||(19153283-19153330)
chr7 (346-393)||(20752682-20752729)
chr7 (672-734)||(31493229-31493292)
chr7 (704-743)||(39272814-39272853)
chr7 (499-545)||(140251-140297)
chr7 (507-557)||(8293948-8293997)
chr7 (705-743)||(11803421-11803459)
chr7 (699-788)||(2574360-2574448)
chr7 (674-743)||(16223867-16223936)
chr7 (363-462)||(18368981-18369077)
[»] scaffold0005 (1 HSPs)
scaffold0005 (346-817)||(167949-168412)
[»] chr6 (48 HSPs)
chr6 (346-822)||(28933304-28933774)
chr6 (346-857)||(21907417-21907924)
chr6 (410-783)||(6630375-6630745)
chr6 (343-794)||(11176932-11177359)
chr6 (470-777)||(8241381-8241679)
chr6 (346-840)||(22567825-22568311)
chr6 (363-777)||(4339737-4340142)
chr6 (620-783)||(21688536-21688699)
chr6 (459-822)||(19244668-19245029)
chr6 (356-782)||(15466365-15466778)
chr6 (363-599)||(12183196-12183428)
chr6 (414-777)||(9838406-9838761)
chr6 (356-749)||(21672152-21672539)
chr6 (356-749)||(21679568-21679955)
chr6 (410-559)||(17827000-17827145)
chr6 (378-748)||(22410050-22410409)
chr6 (366-559)||(23645672-23645861)
chr6 (356-748)||(27737408-27737793)
chr6 (346-462)||(9726007-9726120)
chr6 (503-748)||(14079176-14079419)
chr6 (512-777)||(1635110-1635371)
chr6 (356-522)||(21688736-21688899)
chr6 (425-525)||(8039074-8039177)
chr6 (356-478)||(23143717-23143838)
chr6 (654-743)||(14072371-14072461)
chr6 (346-595)||(22566030-22566276)
chr6 (663-743)||(2586996-2587077)
chr6 (363-485)||(9516787-9516909)
chr6 (672-755)||(18075128-18075212)
chr6 (503-678)||(20005704-20005879)
chr6 (656-743)||(20144827-20144915)
chr6 (656-743)||(22187924-22188012)
chr6 (356-436)||(17729147-17729224)
chr6 (346-545)||(25927223-25927417)
chr6 (362-599)||(23844329-23844563)
chr6 (704-743)||(11136297-11136336)
chr6 (704-743)||(28933299-28933338)
chr6 (705-743)||(14637973-14638011)
chr6 (410-557)||(24252137-24252282)
chr6 (614-742)||(24251964-24252093)
chr6 (504-559)||(22813625-22813680)
chr6 (704-743)||(20005580-20005619)
chr6 (704-743)||(22813405-22813444)
chr6 (363-436)||(27124519-27124589)
chr6 (614-664)||(9898766-9898816)
chr6 (705-743)||(15466785-15466823)
chr6 (356-435)||(18075416-18075492)
chr6 (346-403)||(19244570-19244627)
[»] chr2 (39 HSPs)
chr2 (345-738)||(32085447-32085831)
chr2 (452-822)||(29027584-29027950)
chr2 (410-756)||(28605889-28606231)
chr2 (348-783)||(20174323-20174747)
chr2 (495-777)||(25887593-25887873)
chr2 (410-789)||(25885140-25885513)
chr2 (358-789)||(23011443-23011864)
chr2 (363-690)||(17743252-17743573)
chr2 (379-743)||(25618574-25618932)
chr2 (693-822)||(29849652-29849781)
chr2 (341-748)||(17349338-17349730)
chr2 (503-741)||(17890076-17890309)
chr2 (356-559)||(15339233-15339433)
chr2 (356-681)||(29719018-29719335)
chr2 (363-565)||(11382651-11382850)
chr2 (346-690)||(27908894-27909233)
chr2 (346-545)||(45621799-45621995)
chr2 (654-743)||(28928928-28929018)
chr2 (503-708)||(26603120-26603320)
chr2 (697-757)||(11390607-11390667)
chr2 (697-757)||(11407268-11407328)
chr2 (356-678)||(31804695-31805004)
chr2 (363-559)||(28925524-28925716)
chr2 (503-682)||(30411805-30411981)
chr2 (535-678)||(26667465-26667607)
chr2 (356-471)||(25888216-25888324)
chr2 (503-556)||(45553268-45553320)
chr2 (356-462)||(12953295-12953398)
chr2 (503-668)||(17675427-17675589)
chr2 (410-559)||(13776384-13776533)
chr2 (502-595)||(23933415-23933506)
chr2 (603-750)||(9762164-9762312)
chr2 (363-464)||(29883226-29883328)
chr2 (503-679)||(17635562-17635735)
chr2 (704-743)||(23933293-23933332)
chr2 (518-559)||(12953248-12953290)
chr2 (346-462)||(45553115-45553228)
chr2 (681-742)||(13776647-13776708)
chr2 (503-559)||(25920391-25920448)
[»] chr1 (59 HSPs)
chr1 (457-822)||(18100659-18101019)
chr1 (365-843)||(33190681-33191151)
chr1 (345-789)||(24281261-24281694)
chr1 (447-755)||(28008188-28008491)
chr1 (356-734)||(9787612-9787983)
chr1 (479-777)||(12012505-12012797)
chr1 (467-777)||(15807711-15808016)
chr1 (378-783)||(24214561-24214947)
chr1 (364-822)||(16179010-16179458)
chr1 (506-775)||(21449218-21449485)
chr1 (356-684)||(22664201-22664523)
chr1 (626-822)||(25404142-25404338)
chr1 (363-755)||(13345048-13345433)
chr1 (625-768)||(14779805-14779948)
chr1 (356-743)||(17359157-17359537)
chr1 (600-743)||(16112053-16112195)
chr1 (544-789)||(25960846-25961085)
chr1 (410-737)||(9401551-9401875)
chr1 (490-749)||(31235766-31236024)
chr1 (356-557)||(23037918-23038115)
chr1 (363-557)||(25405536-25405727)
chr1 (363-712)||(17610009-17610353)
chr1 (363-668)||(15543765-15544063)
chr1 (498-709)||(17121260-17121465)
chr1 (345-485)||(12208585-12208725)
chr1 (496-559)||(16360003-16360065)
chr1 (686-777)||(32382699-32382790)
chr1 (410-536)||(147677-147801)
chr1 (505-559)||(21973110-21973164)
chr1 (346-551)||(21847619-21847820)
chr1 (363-559)||(14779567-14779760)
chr1 (346-559)||(15813060-15813268)
chr1 (346-439)||(16359856-16359945)
chr1 (356-559)||(51473781-51473978)
chr1 (614-740)||(21847825-21847950)
chr1 (363-468)||(26648966-26649067)
chr1 (480-545)||(16787645-16787712)
chr1 (509-592)||(21334589-21334672)
chr1 (363-436)||(21449091-21449161)
chr1 (381-492)||(21666576-21666687)
chr1 (705-741)||(15543678-15543714)
chr1 (704-743)||(727853-727892)
chr1 (346-435)||(3591681-3591767)
chr1 (704-743)||(18735913-18735952)
chr1 (704-739)||(18826041-18826076)
chr1 (704-743)||(21334425-21334464)
chr1 (704-743)||(25404137-25404176)
chr1 (502-557)||(32382915-32382969)
chr1 (346-393)||(32383065-32383112)
chr1 (531-565)||(155183-155217)
chr1 (346-462)||(17837502-17837615)
chr1 (705-743)||(18830868-18830906)
chr1 (689-743)||(21972115-21972169)
chr1 (695-777)||(22620590-22620672)
chr1 (503-557)||(44795507-44795561)
chr1 (503-559)||(14781770-14781827)
chr1 (503-559)||(16916850-16916907)
chr1 (503-559)||(21987898-21987955)
chr1 (346-437)||(27117744-27117832)
[»] scaffold0062 (2 HSPs)
scaffold0062 (383-756)||(42938-43304)
scaffold0062 (705-743)||(42868-42906)
[»] scaffold0008 (1 HSPs)
scaffold0008 (346-722)||(54845-55215)
[»] chr8 (40 HSPs)
chr8 (346-789)||(19786716-19787153)
chr8 (356-789)||(14528144-14528559)
chr8 (346-660)||(25182234-25182542)
chr8 (346-756)||(34497100-34497502)
chr8 (410-640)||(13697901-13698125)
chr8 (497-743)||(24644970-24645214)
chr8 (363-665)||(13314795-13315089)
chr8 (356-668)||(24269593-24269897)
chr8 (344-515)||(30806440-30806613)
chr8 (356-690)||(24114059-24114386)
chr8 (356-559)||(29382265-29382465)
chr8 (499-782)||(7983716-7983983)
chr8 (518-750)||(26394416-26394644)
chr8 (497-556)||(44010931-44010990)
chr8 (356-557)||(6884953-6885150)
chr8 (346-462)||(5850926-5851039)
chr8 (675-743)||(9642182-9642251)
chr8 (346-461)||(15238784-15238896)
chr8 (727-788)||(25182142-25182203)
chr8 (502-734)||(30121887-30122115)
chr8 (503-559)||(18448446-18448502)
chr8 (704-743)||(18448251-18448290)
chr8 (677-743)||(23867761-23867828)
chr8 (625-743)||(27659691-27659809)
chr8 (357-437)||(14075590-14075667)
chr8 (378-445)||(2637615-2637679)
chr8 (358-445)||(24904630-24904714)
chr8 (363-445)||(17101911-17101990)
chr8 (503-586)||(18569193-18569276)
chr8 (510-668)||(24110468-24110623)
chr8 (357-408)||(14006091-14006142)
chr8 (654-748)||(14626289-14626383)
chr8 (704-739)||(16404298-16404333)
chr8 (704-743)||(19264428-19264467)
chr8 (357-408)||(26008019-26008070)
chr8 (357-437)||(31288354-31288430)
chr8 (356-405)||(14628371-14628420)
chr8 (363-408)||(24110707-24110752)
chr8 (681-734)||(28276490-28276543)
chr8 (356-405)||(30235372-30235421)
[»] scaffold0024 (1 HSPs)
scaffold0024 (356-743)||(39579-39959)
[»] scaffold0622 (2 HSPs)
scaffold0622 (348-749)||(715-1107)
scaffold0622 (625-778)||(1353-1506)
[»] chr3 (41 HSPs)
chr3 (346-769)||(12805592-12806004)
chr3 (356-777)||(21325335-21325747)
chr3 (363-690)||(21303132-21303451)
chr3 (470-774)||(17155898-17156195)
chr3 (346-738)||(8319025-8319416)
chr3 (467-777)||(2723535-2723831)
chr3 (475-737)||(41508477-41508736)
chr3 (626-756)||(38083814-38083944)
chr3 (570-738)||(8267136-8267301)
chr3 (356-748)||(21301913-21302298)
chr3 (356-736)||(21825601-21825972)
chr3 (363-559)||(16245634-16245826)
chr3 (614-736)||(31285747-31285870)
chr3 (356-742)||(3116144-3116522)
chr3 (346-559)||(5508321-5508529)
chr3 (480-742)||(19908421-19908683)
chr3 (479-736)||(18736405-18736657)
chr3 (510-742)||(8143760-8143986)
chr3 (346-750)||(20429695-20430082)
chr3 (348-455)||(10923134-10923238)
chr3 (373-668)||(4650243-4650528)
chr3 (672-755)||(12373674-12373757)
chr3 (356-450)||(10917913-10918004)
chr3 (506-678)||(12754709-12754881)
chr3 (379-681)||(17438216-17438512)
chr3 (379-743)||(2167342-2167698)
chr3 (704-743)||(4650622-4650661)
chr3 (372-462)||(821515-821602)
chr3 (540-668)||(19171662-19171790)
chr3 (377-462)||(8557130-8557212)
chr3 (506-559)||(932884-932937)
chr3 (507-559)||(8170013-8170066)
chr3 (346-557)||(10744887-10745093)
chr3 (704-737)||(19167794-19167827)
chr3 (346-436)||(12411136-12411223)
chr3 (475-538)||(8445932-8445995)
chr3 (535-667)||(7494915-7495043)
chr3 (503-559)||(8765244-8765300)
chr3 (503-559)||(8770146-8770202)
chr3 (503-559)||(16229858-16229915)
chr3 (372-455)||(28728955-28729035)
[»] scaffold0427 (1 HSPs)
scaffold0427 (410-742)||(2543-2871)
[»] chr5 (38 HSPs)
chr5 (363-783)||(34487640-34488047)
chr5 (346-755)||(22755506-22755908)
chr5 (495-789)||(24265150-24265443)
chr5 (495-789)||(24341781-24342074)
chr5 (346-738)||(24266687-24267068)
chr5 (346-738)||(24343318-24343699)
chr5 (346-559)||(18208155-18208362)
chr5 (337-557)||(18937724-18937940)
chr5 (480-742)||(20744394-20744654)
chr5 (356-538)||(17171479-17171657)
chr5 (356-737)||(15690773-15691145)
chr5 (346-544)||(19283774-19283969)
chr5 (425-545)||(24662094-24662214)
chr5 (475-754)||(25402051-25402326)
chr5 (356-462)||(24852173-24852276)
chr5 (478-559)||(36175247-36175327)
chr5 (503-559)||(20563996-20564053)
chr5 (363-437)||(17185465-17185536)
chr5 (363-445)||(17431885-17431964)
chr5 (704-743)||(15375597-15375636)
chr5 (603-678)||(23388644-23388719)
chr5 (704-743)||(24659690-24659729)
chr5 (356-478)||(25550487-25550608)
chr5 (363-431)||(19004258-19004323)
chr5 (484-557)||(24260635-24260708)
chr5 (500-536)||(15375823-15375859)
chr5 (603-690)||(24659756-24659844)
chr5 (363-436)||(15375909-15375979)
chr5 (704-743)||(19008220-19008259)
chr5 (704-743)||(20563793-20563832)
chr5 (356-445)||(24167602-24167688)
chr5 (614-743)||(17474371-17474501)
chr5 (355-393)||(20419950-20419988)
chr5 (357-437)||(23380283-23380360)
chr5 (702-743)||(17314774-17314815)
chr5 (701-742)||(19051749-19051790)
chr5 (356-435)||(19086207-19086283)
chr5 (659-743)||(24167310-24167395)
[»] scaffold0155 (1 HSPs)
scaffold0155 (356-646)||(35815-36099)
[»] scaffold0102 (1 HSPs)
scaffold0102 (414-777)||(35587-35946)
[»] scaffold0043 (1 HSPs)
scaffold0043 (484-739)||(89583-89833)
[»] scaffold0002 (1 HSPs)
scaffold0002 (465-586)||(114589-114710)
[»] scaffold0502 (1 HSPs)
scaffold0502 (640-744)||(393-497)
[»] scaffold0351 (2 HSPs)
scaffold0351 (420-586)||(151-320)
scaffold0351 (465-586)||(5641-5759)
[»] scaffold0838 (1 HSPs)
scaffold0838 (363-544)||(2372-2548)
[»] scaffold0832 (1 HSPs)
scaffold0832 (363-544)||(2403-2579)
[»] scaffold0035 (1 HSPs)
scaffold0035 (363-559)||(69915-70107)
[»] scaffold0638 (1 HSPs)
scaffold0638 (363-559)||(726-919)
[»] scaffold0653 (1 HSPs)
scaffold0653 (356-462)||(4484-4587)
[»] scaffold0016 (2 HSPs)
scaffold0016 (603-678)||(3749-3824)
scaffold0016 (357-437)||(12105-12182)
[»] scaffold0650 (1 HSPs)
scaffold0650 (346-450)||(6272-6373)
[»] scaffold0054 (2 HSPs)
scaffold0054 (626-743)||(72286-72404)
scaffold0054 (503-559)||(72148-72205)
[»] scaffold0019 (3 HSPs)
scaffold0019 (681-743)||(163820-163882)
scaffold0019 (681-743)||(181427-181489)
scaffold0019 (503-557)||(181612-181666)
[»] scaffold0957 (1 HSPs)
scaffold0957 (503-591)||(3283-3371)
[»] scaffold0263 (1 HSPs)
scaffold0263 (503-559)||(15785-15841)
[»] scaffold0671 (1 HSPs)
scaffold0671 (704-743)||(828-867)
[»] scaffold0034 (1 HSPs)
scaffold0034 (704-743)||(76803-76842)
[»] scaffold0386 (1 HSPs)
scaffold0386 (503-559)||(6009-6066)


Alignment Details
Target: chr4 (Bit Score: 515; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 223 - 900
Target Start/End: Complemental strand, 22357772 - 22357098
Alignment:
Q  223 attgacaaggggagacttttattaattaaagtgcctctaacactccttgtacgacagtcgctcccgaaaatatttgaactttataccttgagattataag 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22357772 attgacaaggggagacttttattaattaaagtgcctctaacactccttgtacgacagtcgctcccgaaaatatttgaactttatagcttgagattataag 22357673  T
Q  323 ctaaactcttaccattgacataatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccaca 422  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22357672 ctaaactcttaccattgatataatgatggtcagattaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccaca 22357573  T
Q  423 tggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 522  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  22357572 tggattgtcgtttcatttaaacagttcgtgttacttatttaaagttgacgatataaaaaataagagataagagttagagattgcaatttttatttgtttg 22357473  T
Q  523 caacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaa 622  Q
    ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||    
T  22357472 caatatagcaagttacttgtttttgattgcagaaaaggaagcatcgtttaggactttttgaatcccccctattt---attttgttggataataaataaaa 22357376  T
Q  623 tccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcac 722  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  22357375 tccatgtcgcgtttagttatcttaaatagaatatacaagtgatgagattgttgagacattctaacctagtcggttgtcaagctgcacctgttgatcgcac 22357276  T
Q  723 ggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaacttcactgctggatcgcatgatgatccttacgtgc 822  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| | ||||| | ||||||||||||||||||||||||    
T  22357275 ggtgatccttacgtgcggggtctatactatctcgactggtctaggtctatccctctgatggctaaatccactg-ttgatcgcatgatgatccttacgtgc 22357177  T
Q  823 aggg-ctttgtaattcaaaagttaattgacacataggattaaaattggcgttcc-agatttccaaaaccaa-gaaggtcaa 900  Q
     ||| ||||||||||| |||| |||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||    
T  22357176 ggggtctttgtaattc-aaaggtaattgacacatagaatt-aaattggcgttccaagatttccaaaaccaatgaaggtcaa 22357098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 346 - 817
Target Start/End: Original strand, 14648880 - 14649343
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| ||||||||||||| |||||| |    
T  14648880 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccaca-ggattgtcgtttcttctaaata 14648975  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
    | |||||||| |||||| ||||||||||||||||||| ||||  |||| |||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  14648976 gctcgtgttacttattttaagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttt 14649075  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    |||||| ||||||||||||| || |||||||| |||||||| ||||| ||||||   |||||||||||||||||| || |  ||||||||||||||||||    
T  14649076 tggttgtagaaaaggaaacaacggttaggactctttgaatc-cccctgtttata---ttgttggataataaataacattctagtcgcgtttagttatctt 14649171  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgt 745  Q
    || || | ||||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |    
T  14649172 aactagactatacaagtgacgaggtcgttgggacgttctaacctagtcagttgtcaagctgcacctgttgatcgcacggtgatccatacgtgtggggtct 14649271  T
Q  746 atactatctcgactgatctaggtctatccctctgatgggtaacttca-ctgctggatcgcatgatgatcctta 817  Q
    |||||||||||  |||||||||| |||||||| ||||| ||||| || || || ||||||| |||||||||||    
T  14649272 atactatctcggttgatctaggtatatccctccgatggctaactgcacctact-gatcgcacgatgatcctta 14649343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 358 - 777
Target Start/End: Complemental strand, 19929777 - 19929364
Alignment:
Q  358 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatt 457  Q
    |||| |||||||| |||||||||||||||||| ||| || ||| || ||||   ||||||||||||||||||||||||| |||||| ||  ||||||| |    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagta---tcgtatccacatggattgtcgtttcgtctaaatagcccgtgttact 19929681  T
Q  458 tatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    ||||| |||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||||||||    
T  19929680 tattttaagttgacaatataaaataaaagagataagggttaaagatttcaatttttatctgtttgcaacagagcaaattacatgtttttggttgcagaaa 19929581  T
Q  558 aggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatata 657  Q
    |||||||| |  |||||||| ||| |||  |||||  |||||   | |||||||||||||||| || ||||||||||||||||||||||| || | ||||    
T  19929580 aggaaacaacagttaggactctttaaattccccctgcttata---tcgttggataataaataacattcatgtcgcgtttagttatcttaagtagactata 19929484  T
Q  658 caagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcga 757  Q
    ||||||||||| |  |||||| ||||| ||||||||||||||||| |||||||||  ||||||||| ||||||||||  ||  ||| ||||||||||||     
T  19929483 caagtgatgaggcctttgggatgttctgacctagtcggttgtcaaactgcacctgccgatcgcacgttgatccttacaagcatggtctatactatctcgg 19929384  T
Q  758 ctgatctaggtctatccctc 777  Q
     | |||||||||||| ||||    
T  19929383 tttatctaggtctattcctc 19929364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 345 - 789
Target Start/End: Original strand, 19092279 - 19092715
Alignment:
Q  345 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 444  Q
    |||||||||| |||||| |||||||| ||||  |||| ||||||||||| || |||| | ||||   ||| || |||||||||||||||||| || ||||    
T  19092279 atgatggtcagattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagta---tcgcattcacatggattgtcgtttcgtccaaac 19092375  T
Q  445 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
    |  ||  |||  |||||| ||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| ||||| || || |||| |||||    
T  19092376 aactcacgttgcttattttaagttgacgatattaaataaaagagataagagttagagattgcaatttttatctgtttacaacagagtaaattacctgttt 19092475  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    | |||| |||||||| ||| | || |||||||| |||| ||| ||| |||||||   ||| ||||||  ||||||| || ||||| ||||||||||| ||    
T  19092476 t-ggttacagaaaagtaaatagcggttaggactctttgcatcccccatatttat---tttattggatt-taaataacattcatgttgcgtttagttaact 19092570  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtg 744  Q
    ||| || | ||||||||||||||||| |||||||||||||||| | ||| |||| |||||||||||||||||||||| | |||||||||||||| ||||     
T  19092571 taagtagactatacaagtgatgagaccgttgggacgttctaactttgtcagttgccaagctgcacctgttgatcgcatgatgatccttacgtgcagggtc 19092670  T
Q  745 tatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    ||||||||||    |||||||||| |||||||  ||||| |||||    
T  19092671 tatactatctttgttgatctaggtttatcccttcgatggctaact 19092715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 356 - 777
Target Start/End: Original strand, 17671997 - 17672401
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| |||| |   ||||||||||||||||| ||||| ||||||||  ||| ||||    
T  17671997 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatt---gtatccacatggattgttgtttcgtctaaacaactcgcgtta 17672093  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 555  Q
     |||||| ||||| ||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||| |||||||||| ||  ||||||||||||    
T  17672094 cttattttaagttaacgatataaaataaaagagttaaaggttagagattgcaatttttatctgtttgcaacagagcaagttacctg-gtttggttgcaga 17672192  T
Q  556 aaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaata 655  Q
    |||| ||  | |  |||||| | ||||             ||| ||||||||||||| ||||||| |  ||||||||||||| |||||||||||| | ||    
T  17672193 aaagtaagaagcagttaggattatttg-------------tatcattttgttggatattaaataacagtcatgtcgcgtttatttatcttaaatagacta 17672279  T
Q  656 tacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    |||| ||||||||   ||||||||| ||||||||| ||| ||||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||    
T  17672280 tacaggtgatgaggtcgttgggacgctctaacctaatcgattgtcaagctgcacctgctgatcgcacagtgatcgttacgtgcagggtgtatactatctc 17672379  T
Q  756 gactgatctaggtctatccctc 777  Q
    |  |||| | ||| ||||||||    
T  17672380 ggttgatttcggtttatccctc 17672401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 346 - 822
Target Start/End: Original strand, 5679190 - 5679659
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||  |||||||| ||||| |||||||||||||||| || | |||| ||||   ||||||| ||||| | | | ||||| || |||||    
T  5679190 tgatggtccaattagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagta---tcgtatctacatgaacttttgtttcgtccaaaca 5679286  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
     |||| |||| |||||| ||||| ||||||||||||| |||||||||| |||||| |||||||||||||| |||||| |||| |||||||||| | |||     
T  5679287 attcgcgttacttattttaagttaacgatataaaataaaagagttaagggttagacattgcaatttttatctgtttgtaacagagcaagttacctattt- 5679385  T
Q  546 tggttgcagaaaaggaaa-catcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
     ||||||| |||| | || || |  |||||||| ||||||||  ||||||||||   ||||||||| | ||||||| || ||||||||||||||||||||    
T  5679386 -ggttgcaaaaaaagtaagcagccattaggactctttgaatcctccctatttat---tttgttgga-attaaataacattcatgtcgcgtttagttatct 5679480  T
Q  645 taaa-taaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||| || | ||||||||| |||||  |||||||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||| |||| |||| |||    
T  5679481 taaagtagactatacaagtaatgaggttgttgggacgttctaagctagtcgggtgttaagctgcacctgctgatcgcacagtgatctttacatgcgtggt 5679580  T
Q  744 gtatactatctcgactgatctaggtctatccctctgatgggtaacttca-ctgctggatcgcatgatgatccttacgtgc 822  Q
     ||||||||| |   ||||||||||| || ||||  |||| ||||| || || || ||||||||| ||||||||||||||    
T  5679581 ttatactatccctgttgatctaggtcaattcctccaatggctaactacagctact-gatcgcatggtgatccttacgtgc 5679659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 22357900 - 22357768
Alignment:
Q  8 caatgaaagttacacggaaggctaaatgaatggacttccactgatcattatattcataacataacatctattgaactcaagatatctgtttcaattccag 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22357900 caatgaaagttacacggaaggctaaatgaatggacttccaccgatcattatattcataacataacatctattgaactcaagatatctgtttcaattccag 22357801  T
Q  108 aagcttcaactgctgatattccactgagattga 140  Q
    |||||||||||||||||||||||||||||||||    
T  22357800 aagcttcaactgctgatattccactgagattga 22357768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 363 - 777
Target Start/End: Original strand, 13908856 - 13909264
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| ||||||||||||| || ||||| ||||||||| ||||||    
T  13908856 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttattt 13908952  T
Q  463 ----aaagttgacgatataaaatataagagttaagagttagaga---ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcag 554  Q
        ||  ||||||||||||||       || ||| |||||| |   ||||||||||||| ||||||||||| |||||||| || ||||||||||||||     
T  13908953 ttgtaattttgacgatataaaa-------gtaaag-gttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaa 13909044  T
Q  555 aaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaat 654  Q
    ||||| || || || |||||| | |||||||| ||| | ||||||   |||||||||| ||||||| ||  |||||  ||||| |||| |||  || | |    
T  13909045 aaaagtaagcagcggttaggattctttgaatcccccttgtttata---ttgttggatattaaataacatatatgtcatgtttatttatattaggtagatt 13909141  T
Q  655 atacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatct 754  Q
    ||||||||||| || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||| |||||| |||    
T  13909142 atacaagtgataaggccgttgggacgttctaacctagtcggttttcaagttgcacctgttgatcgcacggtgatccttaagtgtggggtctatactgtct 13909241  T
Q  755 cgactgatctaggtctatccctc 777  Q
    |   |||| ||||| ||||||||    
T  13909242 ccgttgatttaggtatatccctc 13909264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 356 - 554
Target Start/End: Complemental strand, 12578370 - 12578176
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| |||||||||||||| ||||||| || ||| || ||||   ||||||||||||||||||||||||  || ||||| || | |||     
T  12578370 attaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagta---tcgtatccacatggattgtcgttttgtccaaacaatttgcgttt 12578274  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 554  Q
     |||||| ||||||||||||||||||| |||||| ||| |||||||||| |||||||||| ||||||||||| |||||||||| || ||||||||||||    
T  12578273 cttattttaagttgacgatataaaataaaagagtaaagggttagagattacaatttttatctgtttgcaacagagcaagttacctg-ttttggttgcag 12578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 654 - 776
Target Start/End: Complemental strand, 22173363 - 22173241
Alignment:
Q  654 tatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatc 753  Q
    |||||||||||||||  || |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| |||| |||||||||    
T  22173363 tatacaagtgatgaggttgctgggacgttctaaccttgtcggttgtcaagttgcacatgttgatcgcacggtgatccttacgtgcagggtctatactatc 22173264  T
Q  754 tcgactgatctaggtctatccct 776  Q
    |||  ||||||||||||||||||    
T  22173263 tcggttgatctaggtctatccct 22173241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 346 - 559
Target Start/End: Complemental strand, 17951410 - 17951201
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggatt-gtcgtttcatctaaac 444  Q
    ||||||||  |||||  |||||||| ||||| ||||||||||| |||| || |||||||||||   |||||||||  |||||| |||||||| |||||      
T  17951410 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagta---tcgtatccat-tggatttgtcgtttcgtctaact 17951315  T
Q  445 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
    || ||| |||| |||||| ||||||||||||||||||| |||||| | | ||||||||||||||||||||| ||||||||||| |||||||||| ||  |    
T  17951314 agctcgcgttacttattttaagttgacgatataaaataaaagagtgacgggttagagattgcaatttttatctgtttgcaacagagcaagttacctg-at 17951216  T
Q  545 ttggttgcagaaaag 559  Q
    |||||||||||||||    
T  17951215 ttggttgcagaaaag 17951201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 346 - 559
Target Start/End: Complemental strand, 17955262 - 17955053
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggatt-gtcgtttcatctaaac 444  Q
    ||||||||  |||||  |||||||| ||||| ||||||||||| |||| || |||||||||||   |||||||||  |||||| |||||||| |||||      
T  17955262 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagta---tcgtatccat-tggatttgtcgtttcgtctaact 17955167  T
Q  445 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
    || ||| |||| |||||| ||||||||||||||||||| |||||| | | ||||||||||||||||||||| ||||||||||| |||||||||| ||  |    
T  17955166 agctcgcgttacttattttaagttgacgatataaaataaaagagtgatgggttagagattgcaatttttatctgtttgcaacagagcaagttacctg-at 17955068  T
Q  545 ttggttgcagaaaag 559  Q
    |||||||||||||||    
T  17955067 ttggttgcagaaaag 17955053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 347 - 528
Target Start/End: Original strand, 11490518 - 11490695
Alignment:
Q  347 gatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacag 446  Q
    |||||||  |||||| |||||||| ||||  |||| ||||||||||| || |||||| ||||   ||||||||||| ||||||| ||||| || |||||     
T  11490518 gatggtcggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagta---tcgtatccacagggattgtagtttcttccaaacaa 11490614  T
Q  447 ttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacat 528  Q
    |||| |||| |||||| |  |||||||||||||||| ||||||| || ||||||||||||||||||||| ||||| ||||||    
T  11490615 ttcgcgttacttattttagtttgacgatataaaataaaagagtt-agtgttagagattgcaatttttatctgttttcaacat 11490695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 425 - 742
Target Start/End: Complemental strand, 8969760 - 8969455
Alignment:
Q  425 gattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgca 524  Q
    |||||||||||| || ||||| ||||||||| ||||||    |||||||||||| | ||      |||| ||||||||||||||||| ||| | | ||||    
T  8969760 gattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacgatataataaat------taagggttagagattgcaatttatatctatatgca 8969667  T
Q  525 acatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatc 624  Q
    ||| |||||||||| | ||||  |||||| |  || || ||  | |||||||| || ||||| |||||||||||   |||||| || | ||||||| ||     
T  8969666 acagagcaagttacatttttt--gttgcaaattagtaagcaatggttaggactcttcgaatc-cccctatttat---tttgtttga-actaaataacata 8969574  T
Q  625 catgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacg 723  Q
     || |||||||||||||||| || || | |||||| |||||||| | || ||||||||||||||||||||||| |||||| |||||||||||||| |||     
T  8969573 aatctcgcgtttagttatctgaagtagactatacacgtgatgaggccgtcgggacgttctaacctagtcggttcgtcaagttgcacctgttgatcacaca 8969474  T
Q  724 gtgatccttacgtgcgggg 742  Q
     ||||||||||||||||||    
T  8969473 atgatccttacgtgcgggg 8969455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 410 - 750
Target Start/End: Complemental strand, 17337188 - 17336850
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagatt-gcaa 508  Q
    ||||||||||| |  ||||||| |||| || ||||| || | |||| ||||||  ||||||||||||||  || |||||| ||| ||| |||||| ||||    
T  17337188 tatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttagttgacgatataa--taaaagagtaaagggtttgagatttgcaa 17337091  T
Q  509 tttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgtt 607  Q
    ||||||| ||||| ||||| |||||| |||| |||||||||||||| ||||| || ||  | ||| || | || ||||| ||| ||||||||   ||| |    
T  17337090 tttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattcttcgaatcccccttatttata---ttgat 17336994  T
Q  608 ggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctg 706  Q
    ||||| ||||||| |   |||||||||| | ||||||||  || | ||||||||||||||| | ||||| || || |||||||| ||||| |||||||||    
T  17336993 ggatattaaataacagtaatgtcgcgttcatttatcttaggtagactatacaagtgatgagtccgttggaacattactaacctaatcggtcgtcaagctg 17336894  T
Q  707 cacctgttgatcgcacggtgatccttacgtgcggggtgtatact 750  Q
    |||||  ||  | |||||||||||||||||  ||||| ||||||    
T  17336893 cacctactggccacacggtgatccttacgtatggggtctatact 17336850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 363 - 877
Target Start/End: Original strand, 7582299 - 7582807
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| |||||||||||||||||||||| || |||||| ||||   || |||||||||||||||| ||||| || ||||| |  |  ||| ||||||    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagta---tcatatccacatggattgttgtttcgtccaaacaatctgcattacttattt 7582395  T
Q  463 ----aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaa 557  Q
        ||  |||||||||||||| ||||     |||  ||||   |||||||||| || ||||||||| | | |||||| || ||||||||||||||||||    
T  7582396 tggtaagtttgacgatataaaagataa-----aaggcttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaa 7582490  T
Q  558 aggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatata 657  Q
    |  || ||  | |||||| | |||||||| || || ||||||   |||||||||| ||||||| |   || || |||||| ||||||||  || | ||||    
T  7582491 aataagcagtggttaggattctttgaatcccctctgtttata---ttgttggatattaaataacagtaatatcacgtttatttatcttaggtagactata 7582587  T
Q  658 caagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcg 756  Q
    |||| ||||||   ||| ||||||| ||||||||||||||  ||||| ||||| ||||||||||||  ||||||||||||||||||| | |||| || |     
T  7582588 caagagatgaggtcgttcggacgtttctaacctagtcggtcatcaagttgcacatgttgatcgcacaatgatccttacgtgcggggtct-tactctccca 7582686  T
Q  757 actga-tctaggtctatccctctgatgggtaacttca-ctgctggatcgcatgatgatccttacgtgcaggg-ctttgtaattcaaaagttaattgacac 853  Q
      ||| | |||||||||||||| ||||| ||| | || ||||| ||||||| | |||||||||||||| ||| |||  |||||| |||||||||||| ||    
T  7582687 gttgattataggtctatccctccgatggctaattgcacctgct-gatcgcacggtgatccttacgtgcggggtcttgctaattc-aaagttaattgaaac 7582784  T
Q  854 ataggattaaaattggcgttccag 877  Q
    |||  | | |||||||||||||||    
T  7582785 ata-aacttaaattggcgttccag 7582807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 497 - 742
Target Start/End: Complemental strand, 19374778 - 19374538
Alignment:
Q  497 tagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctattt 596  Q
    |||||||||||| |||||| |||||||| || |||||||||| |||||| ||||||||||| | || ||| | |||||| | |||| ||| ||| ||||     
T  19374778 tagagattgcaaattttatatgtttgcagcaaagcaagttacctgtttt-ggttgcagaaatgtaagcattggttaggattctttgtatcgcccttattc 19374680  T
Q  597 ataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggt 696  Q
    ||    |||||||| | ||||||| || |||||| | |||||||||| ||| || | |||  |||||| ||| | ||||||| ||||||||||| |||||    
T  19374679 at----ttgttgga-attaaataacattcatgtcacatttagttatcctaagtagactatctaagtgaggagtcggttgggatgttctaacctaatcggt 19374585  T
Q  697 t-gtcaagctgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    | || ||| ||||||| |||||||||| || ||||||||||||||||    
T  19374584 tcgttaagttgcacctattgatcgcacagtcatccttacgtgcgggg 19374538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 503 - 690
Target Start/End: Complemental strand, 19492673 - 19492487
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataat 601  Q
    ||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||| || |  || |||||| | || ||||| ||||| ||||||      
T  19492673 ttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaagtaagcggcggttaggattcttcgaatcccccctgtttata-- 19492576  T
Q  602 tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaaccta 690  Q
     |||||||||| ||| ||| |   |||||||||||| ||||||||  || | ||||||||||||||| | ||||||||||| ||||||||    
T  19492575 -ttgttggatattaagtaacagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgaggcagttgggacgttactaaccta 19492487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 345 - 462
Target Start/End: Complemental strand, 13692784 - 13692670
Alignment:
Q  345 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 444  Q
    |||||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||   |||| ||||||||||||||||||||||  | ||||    
T  13692784 atgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcatatccacatggattgtcgtttcgaccaaac 13692688  T
Q  445 agttcgtgttatttattt 462  Q
    | ||||||||| ||||||    
T  13692687 aattcgtgttacttattt 13692670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 358 - 522
Target Start/End: Complemental strand, 22176064 - 22175904
Alignment:
Q  358 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatt 457  Q
    |||| |||||||| ||||| |||| ||||||||||| || |||||| |||| |   ||||||| |  ||||||| |||  || ||||| |||| || |||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtatt---gtatccatagagattgtcattttctccaaacaattcgcgtaatt 22175968  T
Q  458 tatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 522  Q
     ||||  |||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  22175967 -attttgagttgatgatataaaataaaagagttaagggttagagattgcaatttttatttgtttg 22175904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 465 - 750
Target Start/End: Complemental strand, 24639458 - 24639178
Alignment:
Q  465 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaa 563  Q
    ||||||||||||||  || || ||| ||| ||||||||||   | |||||||||||||||||| |||||| |||| |||||| ||||||||||||| ||     
T  24639458 agttgacgatataa--taaaatagtaaagggttagagatttgtaattttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaag 24639361  T
Q  564 catcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtg 663  Q
    ||  | |||||| | |||||||| || |||||||||   |||||||||| ||||||| |   |||||| ||||| ||||||||  |||| |||| ||||     
T  24639360 cagtggttaggattctttgaatc-cctctatttata---ttgttggatattaaataacagtaatgtcgtgtttatttatcttaggtaaactatataagta 24639265  T
Q  664 atgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatact 750  Q
    |||||   ||||||||||| |||||||| | ||| |  |||||||||||  ||||| |||||| ||||||| ||| ||||| ||||||    
T  24639264 atgaggtcgttgggacgttactaacctaataggtcg-gaagctgcacctactgatcacacggtaatccttatgtgtggggtctatact 24639178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 346 - 458
Target Start/End: Complemental strand, 9737623 - 9737509
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagt--actatcgtatccacatggattgtcgtttcatctaaa 443  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| || | ||||||||  | ||||||||||||||||||||| ||||| ||||||    
T  9737623 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaa 9737524  T
Q  444 cagttcgtgttattt 458  Q
    || || | |||||||    
T  9737523 caatttgcgttattt 9737509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 674 - 777
Target Start/End: Original strand, 3775116 - 3775219
Alignment:
Q  674 tgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatc 773  Q
    ||||||||  ||||||| || |||||||||||||||||||||||||||  |||||| ||| ||||||  | |||||||||||||  ||| || |||||||    
T  3775116 tgggacgtgataacctaatcagttgtcaagctgcacctgttgatcgcaatgtgatcattatgtgcggtatctatactatctcgatcgatttacgtctatc 3775215  T
Q  774 cctc 777  Q
    ||||    
T  3775216 cctc 3775219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 557
Target Start/End: Complemental strand, 20829696 - 20829645
Alignment:
Q  506 caatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  20829696 caatttttatctgtttgcgacatagcaagttacttgtttttggttgcagaaa 20829645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 356 - 559
Target Start/End: Complemental strand, 13128978 - 13128777
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| ||   ||| ||||||| | ||||||||||||| || |||||  ||| ||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagag---tattgtatccatagggattgtcgtttcgtccaaacaactcgcgtta 13128882  T
Q  456 ttta--tttaaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgttttt-ggtt 550  Q
     |||  |||  ||||||| |||||    |||| || |||| |||||||| |||||||||||||||||||| |||| || ||| || | ||||||| ||||    
T  13128881 cttatttttttagttgaccatata----ataaaagataagggttagagagttgcaatttttatttgtttggaacagagtaagtttgcctgtttttcggtt 13128786  T
Q  551 gcagaaaag 559  Q
    |||||||||    
T  13128785 gcagaaaag 13128777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 346 - 556
Target Start/End: Complemental strand, 21323989 - 21323784
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||||||||| |||||||| ||||||  || | |||| ||   |||||||||||||| |||||||||||| || |||||    
T  21323989 tgatggtcggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagag---tatcgtatccacatagattgtcgtttcgtccaaaca 21323893  T
Q  446 gttcgtgttatttatttaaagttg-acgatataa-aatataagagttaagag-ttagagattgcaatttttatttgtttgcaacatagcaagttacttgt 542  Q
     |||| |||| ||||||    ||| || ||| || |||| ||||||| || | | ||||||| |||||||||| | ||||||||| |||||||||| ||     
T  21323892 attcgcgttacttattt----ttgaacaataaaataataaaagagttgagggataagagattacaatttttatctatttgcaacagagcaagttacctg- 21323798  T
Q  543 ttttggttgcagaa 556  Q
    ||||||||||||||    
T  21323797 ttttggttgcagaa 21323784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 559
Target Start/End: Original strand, 15164880 - 15164960
Alignment:
Q  480 atataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||    
T  15164880 atataaaagttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctg-ttttggttgcagaaaag 15164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 462
Target Start/End: Complemental strand, 19562275 - 19562179
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| |||||||||||||||||||||| || |||||||||   |||||| |||||| | |||||||||||||| ||||| || || ||| ||||||    
T  19562275 aagtgtaccaaatcatttaccaagtaataaagtgataagtaaag---tatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattacttattt 19562179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 346 - 743
Target Start/End: Complemental strand, 25121339 - 25120952
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||| | ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||||| ||||| || |||||    
T  25121339 tgatggtcggattaggaaagtgttccaaatcgtttaccaagtaataaagtgt-aagtatagta---tcgtatccacaaggattgtggtttcgtccaaaca 25121244  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagag-ttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
     |||| |||| ||||||    || |  | || ||||| ||||||| || | | | |||||||||||| ||| ||||||||||| ||||||||||  | ||    
T  25121243 attcgcgttacttatttggttttaaaaaaat-aaataaaagagttgagtgataatagattgcaatttctatctgtttgcaacagagcaagttacccg-tt 25121146  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    ||| ||||||||||| || || || |||||| | || ||||| |||||||| |    |||||| || | ||||||| || |||| | |  || |||||||    
T  25121145 ttgattgcagaaaagtaagcagcggttaggattcttcgaatc-cccctattca----tttgtt-gacattaaataacattcatgccacactttgttatct 25121052  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||| || | |||  ||||||||||   ||||||| ||||||||||| |||||| |||||| |||||||| |||| |||| |||||  ||||||| |||||    
T  25121051 taagtagactatctaagtgatgaggtcgttgggatgttctaacctaatcggttcgtcaagttgcacctgctgattgcacagtgatatttacgtgtggggt 25120952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 359 - 460
Target Start/End: Complemental strand, 13992977 - 13992879
Alignment:
Q  359 aggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattt 458  Q
    |||||||||||| ||||  |||||||||||||||| || |||||| ||||   ||||||||||||||||| ||||||  || ||||| ||||||||| ||    
T  13992977 aggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagta---tcgtatccacatggattttcgttttgtccaaacaattcgtgttactt 13992881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 723 - 789
Target Start/End: Original strand, 17275908 - 17275974
Alignment:
Q  723 ggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    ||||||||||||||||| ||| ||||||||||||  ||||||| |||| |||||||||||| |||||    
T  17275908 ggtgatccttacgtgcgaggtctatactatctcggttgatctatgtctgtccctctgatggctaact 17275974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 539
Target Start/End: Complemental strand, 19636625 - 19636510
Alignment:
Q  424 ggattgtcgtttcatctaaacagttcgtgttatttatttaaag-ttgacgatataaaatataagagttaagagttagagatt-gcaatttttatttgttt 521  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||| ||||||  |||||||| |||||||||| ||||||||||  | |||||||| |||||    
T  19636625 ggattgtcgtttcatccaaacaattcatgttacttattttaagtttgacg--ataaaataaaagagttaagggttagagattcactatttttatatgttt 19636528  T
Q  522 gcaacatagcaagttact 539  Q
    | | || |||||||||||    
T  19636527 gtagcagagcaagttact 19636510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 462
Target Start/End: Original strand, 19882625 - 19882738
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||| |||| ||||||||||| || | |||| ||||   ||||||| ||||||||||||||||| || |||||    
T  19882625 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagta---tcgtatcaacatggattgtcgtttcgtccaaaca 19882721  T
Q  446 gttcgtgttatttattt 462  Q
     |||| |||| ||||||    
T  19882722 attcgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 614 - 738
Target Start/End: Complemental strand, 9851295 - 9851170
Alignment:
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctg 712  Q
    ||||||| || ||||||||||||||||||||| | || ||||||||  |||| || |||||| ||| |||||||||| ||| ||  ||||| ||||||||    
T  9851295 taaataatattcatgtcgcgtttagttatcttgagtagaatatacagatgataagcctgttgcgacattctaacctaatcgattcatcaagttgcacctg 9851196  T
Q  713 ttgatcgcacggtgatccttacgtgc 738  Q
     |||| ||||  ||||| ||||||||    
T  9851195 ctgatagcacaatgatctttacgtgc 9851170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 705 - 742
Target Start/End: Complemental strand, 17026044 - 17026007
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17026044 tgcacctgttgatcgcacggtgatccttacgtgcgggg 17026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 363 - 462
Target Start/End: Complemental strand, 19492797 - 19492701
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| ||||||||||||||||  | |||||| ||||   ||||||||||| | |||||||||||||| ||||| |||| |||| ||||||    
T  19492797 aagtgtaccaaatcgtttaccaagtaataaagggataagtagagta---tcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattt 19492701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 750
Target Start/End: Original strand, 40227772 - 40228158
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| || ||||||||||||| || ||||| ||    ||| ||||||| | | ||||| |||||||| ||||| |||| ||||    
T  40227772 attaggcaagtgtaccaaatcgtt-accaagtaataaagtgataagttaa----tattgtatccataggaattgtagtttcatccaaacaattcgcgtta 40227866  T
Q  456 tttatttaaagtt-gacgatataaaatataagagttaagagttagagattg-caatttttatttgtttgcaacatagcaagtt-acttgtttttggttgc 552  Q
     ||||||  |||| |||||||  | ||| |||||| ||| | ||||| ||  |||||||||| ||||||||||  || ||||| || | ||||| |||||    
T  40227867 cttatttttagtttgacgata--atataaaagagtaaagggctagaggtttacaatttttatctgtttgcaacggagtaagtttacctattttttgttgc 40227964  T
Q  553 agaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaa 652  Q
     |||||  || || || |||||| || ||||||| ||||||||||||   || ||||||| ||||||| |   || ||||||| | ||||||||  || |    
T  40227965 cgaaaaataagcagcggttagga-ttcttgaatc-cccctatttata---ttattggatattaaataacagtaatatcgcgttcatttatcttaggtaga 40228059  T
Q  653 atatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatact 750  Q
     ||||||| ||||||| | ||| ||||||| ||||||||||| || |||||| |||||||  || || || | ||||||||||||| ||||| ||||||    
T  40228060 ctatacaattgatgaggccgttaggacgttactaacctagtcagtcgtcaagttgcacctactggtcacatgatgatccttacgtgtggggtctatact 40228158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 9052659 - 9052710
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgt 397  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||||||    
T  9052659 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatgt 9052710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 17710104 - 17710143
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  17710104 ctgcacctgttgatcgcacggtgatccttaagtgcggggt 17710143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Complemental strand, 19562137 - 19562079
Alignment:
Q  502 attgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    |||||||||||||| | ||||||||| |||||| |||| ||||||||||||||||||||    
T  19562137 attgcaatttttatctctttgcaacagagcaagtttacctgtttttggttgcagaaaag 19562079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 755
Target Start/End: Original strand, 23652014 - 23652116
Alignment:
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactat 752  Q
    |||||||||||||||   ||||||| ||| ||||||||||  ||  ||||| |||||||| ||||| || ||||||||||||||| | ||| ||||||||    
T  23652014 tatacaagtgatgaggtcgttgggatgttactaacctagttagtcatcaagttgcacctgctgatcacatggtgatccttacgtgtgaggtctatactat 23652113  T
Q  753 ctc 755  Q
    |||    
T  23652114 ctc 23652116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 444
Target Start/End: Complemental strand, 11521302 - 11521210
Alignment:
Q  349 tggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 444  Q
    |||||| ||||  ||||||||| ||||| |||| ||| ||||||| || |||||| ||||   |||||| |||||||||||||||||| |||||||    
T  11521302 tggtcagattaaataagtgtaccaaatcgtttatcaaataataaagtgataagtagagta---tcgtatacacatggattgtcgtttcttctaaac 11521210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 634 - 730
Target Start/End: Original strand, 17106858 - 17106954
Alignment:
Q  634 tttagttatcttaaataaaatatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatcc 730  Q
    |||| ||||||||| || | ||||||||||||||| | ||||||||||  |||||||||  |||||| |||||||||| | ||||| |||||||||||    
T  17106858 tttatttatcttaagtagactatacaagtgatgagcccgttgggacgtgactaacctagaaggttgt-aagctgcaccagctgatcacacggtgatcc 17106954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 11933838 - 11933877
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  11933838 ctgcacttgttgatcgcaccgtgatccttacgtgcggggt 11933877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 445
Target Start/End: Original strand, 15047123 - 15047209
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||||| |||||| | ||||| |||||||||||||||| || |||||| ||    |||||||| ||||||||| ||||||| ||||||||    
T  15047123 attaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagag---gatcgtatctacatggattttcgtttcgtctaaaca 15047209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 445
Target Start/End: Complemental strand, 15107301 - 15107215
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||||| |||||| | ||||| |||||||||||||||| || |||||| ||    |||||||| ||||||||| ||||||| ||||||||    
T  15107301 attaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagag---gatcgtatctacatggattttcgtttcgtctaaaca 15107215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 15165188 - 15165227
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  15165188 ctgcacctgctgatcgcacgatgatccttacgtgcggggt 15165227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 536
Target Start/End: Original strand, 17216822 - 17216991
Alignment:
Q  366 tgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattta---ttt 462  Q
    ||||| ||||| ||||||||| |||||| || |||||| ||||   || |||||||||||||||||||||| || ||||| |||  |||| |||   ||     
T  17216822 tgtaccaaatcgtttaccaagcaataaagtgataagtagagta---tcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttg 17216918  T
Q  463 aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 536  Q
     ||||||| |||||  |||| ||||   ||| |||||| | ||||||||||||| ||||||||||| ||||||||    
T  17216919 taagttgatgatat--aatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtt 17216991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 705 - 743
Target Start/End: Complemental strand, 8969409 - 8969371
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  8969409 tgcacctgttgatcgtacggtgatccttacgtgtggggt 8969371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 479 - 536
Target Start/End: Complemental strand, 16730386 - 16730328
Alignment:
Q  479 aatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 536  Q
    ||||||| ||||||| |||||| | ||||||||||||| ||||||||||| ||||||||    
T  16730386 aatataaaagttaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtt 16730328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 705 - 743
Target Start/End: Original strand, 17107011 - 17107049
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  17107011 tgcacctgctgatcgcacgatgatccttacgtgcggggt 17107049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 704 - 741
Target Start/End: Complemental strand, 11253455 - 11253418
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggg 741  Q
    ||||||||||||||| || |||||||||||||||||||    
T  11253455 ctgcacctgttgatcacatggtgatccttacgtgcggg 11253418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 13692642 - 13692585
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 559  Q
    |||||||||||||| ||||| || | |||||||| || ||||||||||||||||||||    
T  13692642 ttgcaatttttattagtttgtaaaagagcaagtttacctgtttttggttgcagaaaag 13692585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 462
Target Start/End: Original strand, 20315002 - 20315098
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| || ||||||    | |||| |||||||| ||||||||||||| || ||||| || | |||| ||||||    
T  20315002 aagtgtaccaaatcgtttaccaagtaataaattgataagta---gaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 731
Target Start/End: Original strand, 25023979 - 25024036
Alignment:
Q  675 gggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatcct 731  Q
    |||||||||||||||| |||||| |||||| ||||| ||||||| |||| ||||||||    
T  25023979 gggacgttctaacctaatcggttcgtcaagttgcacttgttgattgcacagtgatcct 25024036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 230; Significance: 1e-126; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 346 - 782
Target Start/End: Original strand, 7318258 - 7318687
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| | ||| |||||||||||||||| || |||||| ||||   ||||||||||||||||||||||||| ||||||||    
T  7318258 tgatggtcggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcgtctaaaca 7318354  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
    | |||  ||| |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  7318355 gctcgcattacttattttaagttgacgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacttctttt 7318454  T
Q  546 tggttgcagaaaaggaaacatcgtttaggact-ttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    |||||||||||||||||||| || |||||||| ||||||||| |||||||||   ||||||||||| | ||||||| || ||||| ||||||||||||||    
T  7318455 tggttgcagaaaaggaaacaacgattaggactcttttgaatc-cccctattt---attttgttgga-attaaataacattcatgttgcgtttagttatct 7318549  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtg 744  Q
    ||| || | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||     
T  7318550 taagtagactatacaagtgatgagaccgttgggacgttataacctagtcggttgtcaagctgcacttgctgatcgcacggtgatccatacgtgcggggtc 7318649  T
Q  745 tatactatctcgactgatctaggtctatccctctgatg 782  Q
    ||||||||||||  ||||||||||||||||||| ||||    
T  7318650 tatactatctcggttgatctaggtctatccctcagatg 7318687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 378 - 822
Target Start/End: Complemental strand, 17153236 - 17152795
Alignment:
Q  378 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatata 477  Q
    |||||||||||| ||| || |||||| ||||   |||||||||||| |||||||||||| ||||||||| ||| |||| |||||| |||||||||| |||    
T  17153236 tttaccaagtaagaaagtgataagtagagta---tcgtatccacatagattgtcgtttcgtctaaacagctcgcgttacttattttaagttgacgacata 17153140  T
Q  478 aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggact 577  Q
    ||||| ||||| |||| |||||||||||  |||||||| ||||||||||| |||||||||| |||||||||||||||||||| || || || ||| ||||    
T  17153139 aaataaaagagataagggttagagattgttatttttatctgtttgcaacaaagcaagttacctgtttttggttgcagaaaagtaagcagcggttatgact 17153040  T
Q  578 ttttgaat-cacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgg 676  Q
     ||||||| | |||||||||||  |  | ||||||| ||||||| |    ||||||||||||||||||||| || | ||||||||||||||| | ||||     
T  17153039 ctttgaatccccccctatttat-ttagttttggatattaaataacagttgtgtcgcgtttagttatcttaagtagactatacaagtgatgaggccgttga 17152941  T
Q  677 gacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccct 776  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||  |||||||||| |||||||| ||||| |||||   | |||||||| |||||||    
T  17152940 gacattctaacctagtcggttgtcaatctgcacctattgatcgcacaatgatccttacatgcggggtctataccatctcagtttatctaggtttatccct 17152841  T
Q  777 ctgatgggtaacttca-ctgctggatcgcatgatgatccttacgtgc 822  Q
    ||||| | ||||| || ||||| ||||||| | ||||||||||||||    
T  17152840 ctgatagctaactgcacctgct-gatcgcacggtgatccttacgtgc 17152795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 356 - 774
Target Start/End: Complemental strand, 10587128 - 10586720
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||| ||| ||||||||||||| ||||||||  || |||||    
T  10587128 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatctacagggattgtcgtttcgtctaaacaactcatgtta 10587032  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 555  Q
     |||||| ||||| || |||||||||| ||||  |||| |||| |||||||||||||||| ||||||||||| |||||| ||| ||||| |||||||| |    
T  10587031 cttattttaagtttacaatataaaataaaagaaataagggttaaagattgcaatttttatctgtttgcaacagagcaagatacatgtttctggttgcaaa 10586932  T
Q  556 aaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaata 655  Q
    |||| || ||  | ||| |||| |||||||| ||| |||||||   ||||||||||| ||||||| || ||||||||||||||||||||||| || | ||    
T  10586931 aaagtaagcagtggttaagactctttgaatc-cccttatttat---tttgttggatattaaataacattcatgtcgcgtttagttatcttaagtagacta 10586836  T
Q  656 tacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    || ||  ||||||   |||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||  |||||||||||    
T  10586835 taaaaaggatgag---gttgggacgttctaacttagtcggttgtcaagttgcacctattgatcgcatggtgatccttacgtgcgggggctatactatctc 10586739  T
Q  756 gactgatctaggtctatcc 774  Q
    |  | ||||||||||||||    
T  10586738 ggtttatctaggtctatcc 10586720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 346 - 826
Target Start/End: Original strand, 3734581 - 3735053
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||| || |||||| ||||   ||||||||||||| ||||| ||||  || |||||    
T  3734581 tgatggtcagattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagta---tcgtatccacatgaattgttgtttggtccaaaca 3734677  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
     |||  |||| |||||| ||||||||||||||||||| |||||||||| |||| ||||||||| |||||| ||||||||||| |||||||||| || |||    
T  3734678 attcacgttacttattttaagttgacgatataaaataaaagagttaagggttaaagattgcaaattttatctgtttgcaacagagcaagttacctg-ttt 3734776  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    |||||||||||||| || ||  | |||||||| |||||||| |||||||||   |||| |||||| | ||||||| || ||||||  |||||||||| ||    
T  3734777 tggttgcagaaaagtaagcaatggttaggactctttgaatctcccctattt---atttcgttgga-attaaataacattcatgtcatgtttagttatttt 3734872  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgt 745  Q
    || || | ||||||||||||||| |||||| |||||||||||  |||||| ||||||| ||||||| |||||||| |  ||||||| || ||| ||   |    
T  3734873 aagtagactatacaagtgatgaggctgttgagacgttctaacacagtcgggtgtcaagttgcacctattgatcgcgcactgatcctaacatgcaggacct 3734972  T
Q  746 atactatctcgactgatctaggtctatccctctgatgggtaacttca-ctgctggatcgcatgatgatccttacgtgcaggg 826  Q
    |||||||||||  ||||||||||||||| |||  || | ||||| || ||||| ||||||| | ||||||||||||||||||    
T  3734973 atactatctcggttgatctaggtctatctctccaatagctaactgcacctgct-gatcgcacggtgatccttacgtgcaggg 3735053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 356 - 783
Target Start/End: Original strand, 15869590 - 15870010
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||  ||||| |||||||||||||||| || |||||| ||||   |||||||| || ||||| | ||||  |||||| |||  | ||||    
T  15869590 attaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccgcaaggatttttgttttgtctaaatagtctgcgtta 15869686  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 555  Q
     |||||| ||||||||||||||||||| || || |||| ||| |||||||||||||| || ||||||||| | |  ||||||| |||||||||||||| |    
T  15869687 cttattttaagttgacgatataaaataaaatagataagggtttgagattgcaatttt-atctgtttgcaatagaaaaagttacctgtttttggttgcata 15869785  T
Q  556 aaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaata 655  Q
    |||| ||||| || |||||||| |||||||| ||||| ||||||   |||||||||||||||||||||  | |||| ||||||||||||||| || | ||    
T  15869786 aaagtaaacaacggttaggactctttgaatcccccctgtttata---ttgttggataataaataaaattaacgtcgtgtttagttatcttaagtagacta 15869882  T
Q  656 tacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    | |||||||||||   ||||| ||||||||| |||| | | ||||||| |||||||| |||||||| |||||||||||||||  |||| |||||||||||    
T  15869883 tgcaagtgatgaggtcgttggaacgttctaaactagacaggtgtcaagatgcacctgctgatcgcatggtgatccttacgtgttgggtctatactatctc 15869982  T
Q  756 gactgatctaggtctatccctctgatgg 783  Q
    |  |||||||||  |||||||| |||||    
T  15869983 gtttgatctaggaatatccctccgatgg 15870010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 346 - 724
Target Start/End: Original strand, 9574392 - 9574761
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| |||||| |||||||||||||| ||||||||| |||||| || |||||| ||||   ||||||| |||  |||||| ||||| |||||||     
T  9574392 tgatggtcagattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagta---tcgtatctacagagattgttgtttcgtctaaacg 9574488  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
      ||| ||||||||||| ||||||||||||||||||| |||||||||| |||||| |||| ||||||||| ||||||||| | ||||||| || ||  ||    
T  9574489 actcgcgttatttattttaagttgacgatataaaataaaagagttaagggttagaaattgtaatttttatctgtttgcaatagagcaagtaacctg-gtt 9574587  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    || ||| ||||||| ||||| |  |||||| | |||||||| |||||||||   ||||||||||||| ||||||| |  |||||||||||| ||||||||    
T  9574588 tgtttgaagaaaagtaaacagcagttaggattctttgaatc-cccctattt---attttgttggatattaaataacaatcatgtcgcgttttgttatctt 9574683  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacgg 724  Q
    || || | |||| ||||||||||||  ||| ||||||||||| |||||||||| |||| ||||| ||||||||||||||    
T  9574684 aagtagactata-aagtgatgagaccattgagacgttctaacatagtcggttgccaagatgcacatgttgatcgcacgg 9574761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 424 - 789
Target Start/End: Complemental strand, 3191098 - 3190739
Alignment:
Q  424 ggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgc 523  Q
    ||||||||||||| || ||||| |||||||||||||||| ||||||| ||||||||| | ||| |||  | ||||||||||| ||||||||| |||||||    
T  3191098 ggattgtcgtttcgtccaaacaattcgtgttatttattttaagttgaggatataaaacaaaagggttttgggttagagattgtaatttttatatgtttgc 3190999  T
Q  524 aacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccc-tatttataattttgttggataataaataaaa 622  Q
    |||| | |||||||  | | |||||||||||||||| ||  | ||  ||||||| |||||||| |||| |||||||   ||||||||||  ||||||| |    
T  3190998 aacaga-caagtta--tctatttggttgcagaaaagtaagtagcgagtaggactatttgaatccccccctatttat---tttgttggatt-taaataaca 3190906  T
Q  623 tccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcac 722  Q
      |||||| | |||||||||||||| || | ||||||||||||||| | | ||||| |||||||||| |||||||||||| ||||| ||| |||||||||    
T  3190905 gtcatgtcacatttagttatcttaagtagactatacaagtgatgaggccgatgggaagttctaacctggtcggttgtcaaactgcatctgctgatcgcac 3190806  T
Q  723 ggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    | | ||||||||||| ||||| ||||||||||||| | ||||||||||||||||| ||||| |||||    
T  3190805 gataatccttacgtgtggggtctatactatctcgatttatctaggtctatccctccgatggctaact 3190739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 356 - 782
Target Start/End: Original strand, 6013588 - 6014004
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| |||||||||| |||||| | || || |||||| ||||   ||||||||||| ||||| || ||| ||| ||||| || |  |||    
T  6013588 attaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagta---tcgtatccacaaggattctcattttatccaaacaattggcttta 6013684  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaattttt-atttgtttgcaacatagcaagttacttgtttttggttgcag 554  Q
     |||||| |  |||| ||||||||||| |||||| ||| ||||| ||||||||||||| |||||||||||||| ||||| |||| |||||  ||||||||    
T  6013685 cttattttagtttgatgatataaaataaaagagtaaagggttagcgattgcaattttttatttgtttgcaacaaagcaatttacatgttt--ggttgcag 6013782  T
Q  555 aaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaat 654  Q
    |||||  | || || ||| |||| |||||||| || ||||||||   ||||||||||  ||||||| || |||||| |||||||||||| |||||| | |    
T  6013783 aaaagtgagcaacggttatgactctttgaatc-cctctatttat---tttgttggatt-taaataacattcatgtcccgtttagttatcataaatagact 6013877  T
Q  655 atacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatct 754  Q
    ||||||||||||||   |||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||  ||| |||| |||||    
T  6013878 atacaagtgatgaggacgttgggacgttctaacctagtcggtttttaagttgcatctgttgatcgcacggtgatccttacgtgcaaggtctataatatct 6013977  T
Q  755 cgactgatctaggtctatccctctgatg 782  Q
     |  ||||||||||||||| ||| ||||    
T  6013978 -ggttgatctaggtctatcactccgatg 6014004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 367 - 729
Target Start/End: Complemental strand, 8313488 - 8313137
Alignment:
Q  367 gtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttc---gtgttatttattta 463  Q
    |||| |||||||||||||||||||||| || |||||| | ||   ||||||||||| ||||||||||||| ||||||||  |    |||||| ||||||     
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagatta---tcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttatttt 8313392  T
Q  464 aagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaa 563  Q
    ||||||| | ||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| |  ||||||||||||||||| ||     
T  8313391 aagttgaaggtataaaataaaagagttaagggttagagattgcaatttttatctgttttcaacagagcaagttacct-attttggttgcagaaaagtaag 8313293  T
Q  564 catcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtg 663  Q
    || | ||||||||| || ||||| |||||||||   ||||||||||||  |||||||    |||||| | ||||||||||     || | ||||||||||    
T  8313292 caacatttaggactcttggaatc-cccctattt---attttgttggat-ttaaataaccatcatgtcacatttagttatc-----tatactatacaagtg 8313203  T
Q  664 atgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatc 729  Q
    ||||| | |||||||| |||||| ||||||||||||||||| || ||||||||||||  |||||||    
T  8313202 atgaggccgttgggacattctaatctagtcggttgtcaagcggctcctgttgatcgcgtggtgatc 8313137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 600 - 743
Target Start/End: Original strand, 4986825 - 4986968
Alignment:
Q  600 attttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgt 699  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| || | |||| ||||||||||   ||||| ||||||||||||||||||||||    
T  4986825 attttgttggatattaaataacattcatgtcgcgtttagttatcttaagtagactatataagtgatgaggtcgttggaacgttctaacctagtcggttgt 4986924  T
Q  700 caagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||| || | ||||||||||||||||||||||||||||||||||    
T  4986925 caagttgtatctgttgatcgcacggtgatccttacgtgcggggt 4986968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 600 - 743
Target Start/End: Original strand, 4990923 - 4991066
Alignment:
Q  600 attttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgt 699  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| || | |||| ||||||||||   ||||| ||||||||||||||||||||||    
T  4990923 attttgttggatattaaataacattcatgtcgcgtttagttatcttaagtagactatataagtgatgaggtcgttggaacgttctaacctagtcggttgt 4991022  T
Q  700 caagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||| || | ||||||||||||||||||||||||||||||||||    
T  4991023 caagttgtatctgttgatcgcacggtgatccttacgtgcggggt 4991066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 484 - 777
Target Start/End: Complemental strand, 16297813 - 16297532
Alignment:
Q  484 aagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttga 583  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| || ||||||| | |||||||||||||||||| || || || |||| | |  |       
T  16297813 aagagttaagggttagaaattgcaatttttatatgtttgcaacagagtaagttacctatttttggttgcagaaaagtaagcagcggttagaaatcct--- 16297717  T
Q  584 atcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttc 683  Q
        | |||||||||    |||||||||| ||||||| |  ||||||||||||| ||| ||||| || | ||||||||||| ||| |  |||||||||||    
T  16297716 ----cacctatttat----ttgttggatattaaataacagtcatgtcgcgtttatttaccttaagtagactatacaagtgacgaggccattgggacgttc 16297625  T
Q  684 taacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    ||||||| ||||||||||||||||||||| | || |||||||||||||||||||| ||||  |||||||||||  |||| | ||||||||||||    
T  16297624 taacctaatcggttgtcaagctgcacctgctcattgcacggtgatccttacgtgc-gggtcgatactatctcggttgatttcggtctatccctc 16297532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 363 - 667
Target Start/End: Original strand, 5108568 - 5108864
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| |||| ||||||||||||||||| ||| ||||| ||||   ||||||||||| ||||||||||||| || ||||| ||||     ||  |||    
T  5108568 aagtgtaccaaattatttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaattcgaacacttatttt 5108663  T
Q  463 aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaagg 560  Q
     |||||||||||||||  || ||||||  |  |||||||| || |||||||||| ||||||||| | |||||||| ||||| |||||||||||||||||     
T  5108664 taagttgacgatataa--taaaagagtatatggttagagagttacaatttttatctgtttgcaagagagcaagtttacttgattttggttgcagaaaagt 5108761  T
Q  561 aaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaa 660  Q
    || || || |||||| | |||||||| ||||||||||||   |||||||||| |||||||||| ||||||| ||||| |||||||| ||| | |||||||    
T  5108762 aagcagcggttaggattctttgaatc-cccctatttata---ttgttggatattaaataaaattcatgtcgtgtttatttatcttagatagactatacaa 5108857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 497 - 743
Target Start/End: Original strand, 7397274 - 7397516
Alignment:
Q  497 tagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctattt 596  Q
    ||||||||||||||||||| ||||||||||| | |||||||  |||||||||||||||||||| || || || |||||| | || ||||  || |||||     
T  7397274 tagagattgcaatttttatctgtttgcaacaaaacaagttatctgtttttggttgcagaaaagtaagcagcggttaggattcttcgaattccctctattc 7397373  T
Q  597 ataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggt 696  Q
    ||    |||||||| | ||||||| || ||||| ||| ||||||||||||| || | |||||||||| ||||||| ||||||| || ||||||| |||||    
T  7397374 at----ttgttgga-attaaataacattcatgtggcgattagttatcttaagtagactatacaagtgttgagactattgggacattataacctaatcggt 7397468  T
Q  697 t-gtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    | |||||  ||||| || |||| |||||||||||||||||||||||||    
T  7397469 tcgtcaatatgcacttgatgattgcacggtgatccttacgtgcggggt 7397516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 475 - 755
Target Start/End: Original strand, 9131019 - 9131297
Alignment:
Q  475 ataaaatataagagttaagag-ttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgttta 572  Q
    |||||||| |||||||||| | ||||||||| ||||||||||||||||||||| | |||||||||  |||||||||||||| ||||| || |  || |||    
T  9131019 ataaaataaaagagttaaggggttagagatttgcaatttttatttgtttgcaatagagcaagttaactgtttttggttgcaaaaaagtaagctgcggtta 9131118  T
Q  573 ggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactg 672  Q
    ||| | || ||||| |||  ||| |||   |||||||||| |||||||     || || |||||| |||||||| ||| | ||||||||||||||| ||     
T  9131119 ggattcttcgaatccccc--attgata---ttgttggatattaaataactagaatatcacgtttatttatcttagatagactatacaagtgatgaggcta 9131213  T
Q  673 ttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    |||||||||| ||||||||||| || |||||||| |||||| ||||| |||||||||||||||||| ||| | |||||||||||    
T  9131214 ttgggacgttactaacctagtcagtcgtcaagctacacctgctgatcacacggtgatccttacgtgtgggatctatactatctc 9131297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 363 - 681
Target Start/End: Original strand, 16365707 - 16366020
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| |   ||||| ||||   ||||||||||||||||||||||||  |  ||||| |||| |||| ||||||    
T  16365707 aagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagta---tcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttattt 16365803  T
Q  463 a-aagttgacgatataaaatataagagttaagagttagagattg-caatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagg 560  Q
      |||||||||||||||  || ||||||||||  |||||||||  ||||||| || | |||||| |  |||||||||| |||||||||||||| |||||     
T  16365804 ttaagttgacgatataa--taaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaagttacatgtttttggttgcaaaaaagt 16365901  T
Q  561 aaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtc-gcgtttagttatcttaaataaaatataca 659  Q
    || || || |||||| | || ||||| ||||||||||||   |||||||||| |||||||||   |||||  |||||| ||||||||| || ||||||||    
T  16365902 aagcagcggttaggattcttcgaatctcccctatttata---ttgttggatattaaataaaagtaatgtcatcgtttatttatcttaagtagaatataca 16365998  T
Q  660 agtgatgagactgttgggacgt 681  Q
    ||||||||| | ||||||||||    
T  16365999 agtgatgaggcagttgggacgt 16366020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 486 - 754
Target Start/End: Original strand, 17829691 - 17829953
Alignment:
Q  486 gagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaat 585  Q
    |||||||| ||||| ||||| ||||||||| ||||||||||| | |||||||  |||||| ||||| ||||||  || ||  | ||| || | || ||||    
T  17829691 gagttaagggttagcgattgtaatttttatctgtttgcaacagaacaagttaactgtttt-ggttggagaaaattaagcagtggttaagattcttcgaat 17829789  T
Q  586 cacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttcta 685  Q
    | |||||||||||    ||||| |||| |||||||||| ||||||  ||||| |||| |||| || | ||||||||||||||    ||||| ||||||||    
T  17829790 c-cccctatttat----ttgttagatattaaataaaattcatgtcatgtttatttatgttaagtagactatacaagtgatgaagtcgttggtacgttcta 17829884  T
Q  686 acctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatct 754  Q
    ||||| |||||||||||| |||||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  17829885 acctaatcggttgtcaagttgcaccagttgatcacacggtgatccttacgtgcagggtctatactatct 17829953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 519 - 739
Target Start/End: Complemental strand, 39273121 - 39272902
Alignment:
Q  519 tttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaa 617  Q
    ||||||||| |||||||| || | |||||||||||||||||| || || || ||||||   || ||||| || || ||||||   |||||||||| ||||    
T  39273121 tttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttaggatccttcgaatctcctctgtttata---ttgttggatattaaa 39273025  T
Q  618 taaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttga 716  Q
    |||||   |||||||||||| ||||||||  || | ||||||||||||||| | |||| |||||| |||||||||||||| |||||| |||||||| |||    
T  39273024 taaaagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgaggccgttgagacgtttctaacctagtcggtcgtcaagttgcacctgctga 39272925  T
Q  717 tcgcacggtgatccttacgtgcg 739  Q
    || ||||||||||||||||||||    
T  39272924 tcacacggtgatccttacgtgcg 39272902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 363 - 737
Target Start/End: Original strand, 18662443 - 18662806
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||  ||||| ||||||||| | |||| || |||||| ||||   ||||||||||| ||||||||||||| || ||||| |||  |||| ||||||    
T  18662443 aagtgtatcaaatcgtttaccaagcactaaagtgataagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T
Q  463 aaagttgacgatata-aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagga 561  Q
       ||  || | ||| ||||| |||| || ||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||| | |    
T  18662540 g--gtgaacaaaatataaataaaagatttgagagttagatattgcaatttttatttgtttgcaacagagcaagttacctg-ttttggttgcagaaatgta 18662636  T
Q  562 aacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaag 661  Q
    | || || |||||||| || ||||| |||||| | |    ||||||||  ||| ||||| |||||||||||||| | ||||  ||| || | |||  | |    
T  18662637 agcagcggttaggactcttcgaatc-cccctaatca----tttgttgg--aattaataacatccatgtcgcgttcatttattctaagtagactatctagg 18662729  T
Q  662 tgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtg 737  Q
    | ||||| | || |||||||||||||||| ||||||  ||||| ||||| |||||||||||||||||||||||||||    
T  18662730 taatgagtccgtcgggacgttctaacctaatcggttcttcaagttgcacatgttgatcgcacggtgatccttacgtg 18662806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 363 - 522
Target Start/End: Original strand, 4986557 - 4986713
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| || | |||| ||||   | ||| ||||||||||||||||||| |||||| || ||| |||| ||||||    
T  4986557 aagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagta---tagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattt 4986653  T
Q  463 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 522  Q
     |||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  4986654 taagttgacgataaaaaataaaagtgttaagggttagagattgcaatttttatctgtttg 4986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 363 - 522
Target Start/End: Original strand, 4990655 - 4990811
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| || | |||| ||||   | ||| ||||||||||||||||||| |||||| || ||| |||| ||||||    
T  4990655 aagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagta---tagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattt 4990751  T
Q  463 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 522  Q
     |||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  4990752 taagttgacgataaaaaataaaagtgttaagggttagagattgcaatttttatctgtttg 4990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 356 - 729
Target Start/End: Complemental strand, 9731731 - 9731364
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| ||||  ||||| |||| || |||||| ||||   ||||| ||||| ||||||||||||| || ||||| |||| ||||    
T  9731731 attaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagta---tcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgtta 9731635  T
Q  456 tttatttaaag-ttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     ||||||  || |||| |  |||||||| |||||||| || ||||||| ||||||||||||| | | || ||||||||||||||| ||||||||||||||    
T  9731634 cttatttttagtttgatg--ataaaataaaagagttacgaattagagatttgcaatttttatctatgtgtaacatagcaagttacctgtttttggttgca 9731537  T
Q  554 gaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaa 653  Q
     ||||| || || || |||||  |  | ||||| || |||||||||   ||||||| ||  |||||| |   |||||||||||| ||||||||| || |     
T  9731536 taaaagtaagcagcggttagggttgatcgaatc-ccactatttata---ttgttggctataaaataacagtaatgtcgcgtttatttatcttaattatac 9731441  T
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatc 729  Q
    |||  |||||||||| |  |||||||||| |||||||| ||||| ||||||||||||||| ||||| |||| |||||    
T  9731440 tatgaaagtgatgaggccattgggacgttactaacctaatcggtcgtcaagctgcacctgctgatcacacgatgatc 9731364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 379 - 667
Target Start/End: Original strand, 4785854 - 4786140
Alignment:
Q  379 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa 478  Q
    ||||||||||||||| || |||||| ||||   ||  ||||||| ||||||||||||| || || || |||  |||| ||||||  ||||||||||||||    
T  4785854 ttaccaagtaataaagtgataagtagagta---tcacatccacagggattgtcgtttcgtccaagcacttcacgttacttatttttagttgacgatataa 4785950  T
Q  479 aatataagagttaagagttagagattgcaa----tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttagg 574  Q
    |||| |||||||||| ||||||||||   |    ||||||| | ||||||| | |||||||||| |||||||||||||||||||| || || || |||||    
T  4785951 aataaaagagttaagggttagagatttttaattttttttatctatttgcaatagagcaagttacctgtttttggttgcagaaaagtaagcagcggttagg 4786050  T
Q  575 actttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatga 667  Q
    | | || ||||| | ||||||||||   |||||||||| ||||||| | | ||||| |||| | ||||||||  || | ||||||||||||||    
T  4786051 attcttcgaatccctcctatttata---ttgttggatattaaataacagcaatgtcacgttcatttatcttaggtagactatacaagtgatga 4786140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 363 - 743
Target Start/End: Complemental strand, 8979103 - 8978728
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| |||||||||||||||||||||| || |||||| ||||   || |||||||||||||||| ||||| || ||||| ||||  ||| ||||||    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagta---tcatatccacatggattgttgtttcgtccaaacaattcgcattacttattt 8979007  T
Q  463 ----aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaa 557  Q
        ||  ||||| |||||||| ||||     ||| |||||   |||||||||| || ||||||||| | | |||||| || ||||||||||||||||||    
T  8979006 tggtaagtttgacaatataaaagataa-----aagggttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaa 8978912  T
Q  558 aggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatata 657  Q
    |  || || |  |||||| | ||| |||| || || ||||||   |||||||||| ||||||| |   || ||||||||| ||||||||  || | ||||    
T  8978911 aataagcagcagttaggattctttaaatcccctctgtttata---ttgttggatattaaataacagtaatatcgcgtttatttatcttaggtagactata 8978815  T
Q  658 caagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||| ||||||   ||| ||||||| |||||||||||||| |||||| ||||| ||||||||||||  |||||||||| ||||||||    
T  8978814 caagagatgaggtcgttcggacgtttctaacctagtcggtcgtcaagttgcacatgttgatcgcacaatgatccttacatgcggggt 8978728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 356 - 559
Target Start/End: Complemental strand, 3329762 - 3329561
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    ||||||||||||||  |||| ||||||||||||||||| || |||||| ||||   |||||||||||||||||||||||||||| ||||| |  | ||||    
T  3329762 attaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcatccaaacaatctgcgtta 3329666  T
Q  456 tttattta---aagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggtt 550  Q
     ||||||    ||||| |   |||||    | | || |||| |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3329665 cttatttttgtaagtttaacgtataa----tgaaagataagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtttttggtt 3329570  T
Q  551 gcagaaaag 559  Q
    |||||||||    
T  3329569 gcagaaaag 3329561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 379 - 667
Target Start/End: Original strand, 4818854 - 4819141
Alignment:
Q  379 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa 478  Q
    ||||||||||||||| || |||||| ||||   ||  ||||||| ||||||||||||| || || || |||  |||| ||||||  ||||||||||||||    
T  4818854 ttaccaagtaataaagtgataagtagagta---tcacatccacagggattgtcgtttcgtccaagcacttcacgttacttatttttagttgacgatataa 4818950  T
Q  479 aatataagagttaagagttagagattgcaatttttatttgt---ttgcaacatagcaagttacttgtttttggttgcagaaaaggaaaca--tcgtttag 573  Q
    |||| |||||||||| ||||||||||   | |||| ||| |   |||||| | |||||||||| | |||||||||||||||||| || ||   || ||||    
T  4818951 aataaaagagttaagggttagagatttttaattttttttatctattgcaatagagcaagttacctatttttggttgcagaaaagtaagcagcgcggttag 4819050  T
Q  574 gactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatga 667  Q
    || | || ||||| | ||||||||||   |||||||||| ||||||| | | |||||||||| | ||||||||  || | ||||||||||||||    
T  4819051 gattcttcgaatccctcctatttata---ttgttggatattaaataacagcaatgtcgcgttcatttatcttaggtagactatacaagtgatga 4819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 694 - 857
Target Start/End: Original strand, 1586289 - 1586452
Alignment:
Q  694 ggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaacttca- 792  Q
    |||||||||||||||||| |||||| |||  ||||||||||||||||||| ||||||||||    |||| |||||||||||||| ||| | ||||| ||     
T  1586289 ggttgtcaagctgcacctattgatcacacattgatccttacgtgcggggtctatactatcttcgttgatttaggtctatccctcggatagataactgcac 1586388  T
Q  793 ctgctggatcgcatgatgatccttacgtgcagggctttgtaattcaaaagttaattgacacatag 857  Q
    ||||| |||| || |||||||||||||||| ||  ||||| | || |||| ||||||| ||||||    
T  1586389 ctgct-gatcacacgatgatccttacgtgcgggattttgttaatccaaaggtaattgaaacatag 1586452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 7492248 - 7492167
Alignment:
Q  479 aatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    |||| |||||||||| |||||||||| ||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||    
T  7492248 aataaaagagttaagggttagagatttgcaatttttaactgtttgcaacagagcaagttacctgtttttggttgcagaaaag 7492167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 363 - 462
Target Start/End: Complemental strand, 10584583 - 10584487
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||| ||||||||||| || |||| ||||||   |||||||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  10584583 aagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagta---tcgtatccacatggattgtcgtttcatagaaacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 363 - 536
Target Start/End: Original strand, 2563820 - 2563989
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||||||||||| || ||||| || |||||| ||||||    
T  2563820 aagtgtaccaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttattt 2563915  T
Q  463 ---aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt 536  Q
        ||||| ||||||||    |||| || |||| |||||||| ||| ||||||||| ||||||||||| ||||||||    
T  2563916 ctgtaagttcacgatata----ataaaagataagggttagagagttgaaatttttatctgtttgcaacagagcaagtt 2563989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 681 - 824
Target Start/End: Complemental strand, 18202996 - 18202853
Alignment:
Q  681 ttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctga 780  Q
    |||||||||||| |||||||||| || ||||| |||| | ||||||||| ||||||||||||| |||||||| | |  |||||||||||||| |||   |    
T  18202996 ttctaacctagtaggttgtcaagttgtacctgctgattgtacggtgatcattacgtgcggggtttatactatattggttgatctaggtctattccttcaa 18202897  T
Q  781 tgggtaacttca-ctgctggatcgcatgatgatccttacgtgcag 824  Q
    ||| ||||| || ||||| |||||||   ||||||||||||||||    
T  18202896 tggctaactgcatctgct-gatcgcacagtgatccttacgtgcag 18202853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 19153434 - 19153490
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  19153434 ttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaag 19153490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 20752833 - 20752889
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  20752833 ttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaag 20752889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 480 - 739
Target Start/End: Complemental strand, 1848213 - 1847956
Alignment:
Q  480 atataagagttaagagttagaga--ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggac 576  Q
    |||||| | ||||| ||||||||  ||||||||||||| |||||| |||| |||||||| || |||||| ||||||||||||| || || || ||| ||     
T  1848213 atataaaaattaagggttagagagcttgcaatttttatctgtttgaaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagcggttatgat 1848115  T
Q  577 tttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgg 676  Q
    | || ||||| ||| ||| ||||   |||||||||| |||| || |   |||||| ||||| ||||||||  | | | |||||||||||||| | |||||    
T  1848114 tcttcgaatctccc-tatatata---ttgttggatattaaaaaacagtaatgtcgtgtttatttatcttaggtgaca-atacaagtgatgaggccgttgg 1848020  T
Q  677 gacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcg 739  Q
    |||||| |||||||| ||| | |||||  ||||| |||||| ||||| ||||||||||||||||    
T  1848019 gacgtttctaacctaatcgatcgtcaatttgcacgtgttgaccgcacagtgatccttacgtgcg 1847956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 614 - 699
Target Start/End: Original strand, 1584445 - 1584530
Alignment:
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgt 699  Q
    ||||||| || ||| ||||||||||||||||||| || | |||||||||||| ||  ||||||||| |||||||||||||| ||||    
T  1584445 taaataacattcatatcgcgtttagttatcttaagtagactatacaagtgataaggttgttgggactttctaacctagtcgattgt 1584530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 538
Target Start/End: Original strand, 1587666 - 1587856
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| || ||||| ||||| ||||| ||||| |||| || ||| || ||||   || |||| |||| ||| || |||||||| |||||    
T  1587666 tgatggtcggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagta---tcatatctacatagatagttgtttcatccaaaca 1587762  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagag--attgcaatttttatttgtttgcaacatagcaagttac 538  Q
     |||| ||||  |||||    |||||||||||||||| |||| ||| | |||||||  |||||||||||||||||||||||||| ||||||||||    
T  1587763 attcgcgttacctattttgttttgacgatataaaataaaagatttagg-gttagagagattgcaatttttatttgtttgcaacagagcaagttac 1587856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 356 - 435
Target Start/End: Complemental strand, 2350851 - 2350775
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 435  Q
    |||||| |||||||| |||||||||||||||||||||| || ||||||    | ||||||||||||||||||||||||||    
T  2350851 attaggcaagtgtaccaaatcatttaccaagtaataaactgctaagta---gattatcgtatccacatggattgtcgttt 2350775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 750
Target Start/End: Original strand, 10331595 - 10331688
Alignment:
Q  658 caagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatact 750  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||| |||| ||  || || |||||||||||||||||| ||||| ||||||    
T  10331595 caagtgatgagaccgttgggacgttactaacctaatcggtcgtcaagatgcatctactggtcacacggtgatccttacgtgtggggtctatact 10331688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 557
Target Start/End: Original strand, 10648589 - 10648770
Alignment:
Q  372 aaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgac 471  Q
    ||||| |||||||||||||||| || ||| || ||||   || ||| | || |||||||||||||||||||||| ||||||||| |||||| | |   |     
T  10648589 aaatcgtttaccaagtaataaagtgataaatagagta---tcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttta-gaacaa 10648684  T
Q  472 gata-taaaatataagagttaagagtta-gagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
     ||| || |||| ||||||| || |||| ||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  10648685 aataatacaata-aagagttgagggttaagagattgcaatttttatctgtttgcaacaaagcaagttacatg-ttttggttgcagaaa 10648770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 1584530 - 1584654
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| || ||||||||||||||||||| || ||||| |     ||||||||||||| ||||||| ||||| ||||||||    
T  1584530 tgatggtcggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagtgag----tatcgtatccacagggattgttgtttcgtctaaaca 1584624  T
Q  446 gttcgtgttatttatttaaagttgacgata 475  Q
      ||| |||| |||||| ||||||||||||    
T  1584625 aatcgcgttacttattttaagttgacgata 1584654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 363 - 492
Target Start/End: Complemental strand, 8054586 - 8054457
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||| ||||||| || |||||| ||||   |||||| |||| | ||||||||||| || ||||| ||| ||||| ||||||    
T  8054586 aagtgtaccaaatcgtttaccaaataataaagtgataagtagagta---tcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T
Q  463 a---aagttgacgatataaaatataagagttaa 492  Q
        ||||||||||||||||| |||||||||||    
T  8054489 ttgtaagttgacgatataaaagataagagttaa 8054457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 360 - 462
Target Start/End: Complemental strand, 13759960 - 13759861
Alignment:
Q  360 ggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattta 459  Q
    ||||||||||| ||||| |||||||| ||||||| || |||||| ||||   || |||||||| ||||||||||||| || |||||||||| |||| |||    
T  13759960 ggtaagtgtaccaaatcgtttaccaattaataaagtgataagtagagta---tcatatccacaaggattgtcgtttcgtccaaacagttcgcgttactta 13759864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 628 - 743
Target Start/End: Original strand, 21501522 - 21501638
Alignment:
Q  628 gtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtg 726  Q
    |||||||| ||||||||||  || | |||  |||||||||| || |||||||| ||||||||| ||| || |||||| |||||||| || ||| | ||||    
T  21501522 gtcgcgttcagttatcttatgtagactatctaagtgatgagtctattgggacggtctaacctaatcgatttgtcaagttgcacctgctggtcgtatggtg 21501621  T
Q  727 atccttacgtgcggggt 743  Q
    |||||||||||||||||    
T  21501622 atccttacgtgcggggt 21501638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 467 - 538
Target Start/End: Original strand, 1584335 - 1584405
Alignment:
Q  467 ttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 538  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||| | ||||||| | ||||||||||    
T  1584335 ttgacgatataaaataaaagagttaaaggttagagattgcaatttttatctttttgcaa-aaagcaagttac 1584405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 574 - 647
Target Start/End: Original strand, 4986740 - 4986810
Alignment:
Q  574 gactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaa 647  Q
    |||| |||||||| |||||||||||   ||||||||||| ||||||| || |||||||||||||||||||||||    
T  4986740 gactctttgaatcccccctatttat---tttgttggatattaaataacattcatgtcgcgtttagttatcttaa 4986810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 574 - 647
Target Start/End: Original strand, 4990838 - 4990908
Alignment:
Q  574 gactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaa 647  Q
    |||| |||||||| |||||||||||   ||||||||||| ||||||| || |||||||||||||||||||||||    
T  4990838 gactctttgaatcccccctatttat---tttgttggatattaaataacattcatgtcgcgtttagttatcttaa 4990908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 10937598 - 10937675
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 437  Q
    ||||| |||||||  ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||||||||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagta---tcgtatccacatggattgtcgtttca 10937675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 506 - 646
Target Start/End: Complemental strand, 16058991 - 16058851
Alignment:
Q  506 caatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataatttt 604  Q
    |||||||||| ||||||||||| ||||| || |||||||||||||||||| |||| || || |  |||||| | || ||||| || || | |||  ||||    
T  16058991 caatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttaggattcttcgaatcccctctgtatat-ttttt 16058893  T
Q  605 gttggataataaataaaatccatgtcgcgtttagttatctta 646  Q
    |||||||||||||||| ||  || ||||||||| ||||||||    
T  16058892 gttggataataaataatataaatctcgcgtttatttatctta 16058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 462
Target Start/End: Original strand, 9245176 - 9245279
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| || |||||  |||| |||||||||||| |||||| |||| | ||||   |||||||||||||||||||| |||| | |||||| |||||||||    
T  9245176 attaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagta---tcgtatccacatggattgtcatttcgtttaaacaattcgtgtta 9245272  T
Q  456 tttattt 462  Q
     ||||||    
T  9245273 cttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 462
Target Start/End: Complemental strand, 9864430 - 9864327
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||||| ||||   || |||||||| ||||||||||||| |||||||| || | ||||    
T  9864430 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagta---tcatatccacaaggattgtcgtttcgtctaaacaatttgcgtta 9864334  T
Q  456 tttattt 462  Q
     ||||||    
T  9864333 cttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 545
Target Start/End: Complemental strand, 11221261 - 11221083
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| ||||| |||||||||| || |||||| |||| |   ||||||||| ||||||||||||| | |||||| || | |||| ||||||    
T  11221261 aagtgtaccaaatcgtttactaagtaataaattgataagtagagtatt---gtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattt 11221165  T
Q  463 aaagttgacgatataaaatata-agagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
        || |||||| || | | | |||||| || |||| | | ||||||||||||||||||||||||| || ||||||||||||||    
T  11221164 t---ttaacgataaaataaaaagagagttgagggttaaaaaattgcaatttttatttgtttgcaacagagaaagttacttgtttt 11221083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 696 - 743
Target Start/End: Complemental strand, 9864099 - 9864052
Alignment:
Q  696 ttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  9864099 ttgtcaagttgcacttgttggtcgcacggtgatccttacgtgcggggt 9864052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 17152829 - 17152790
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  17152829 ctgcacctgctgatcgcacggtgatccttacgtgcggggt 17152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 504 - 559
Target Start/End: Complemental strand, 18368938 - 18368883
Alignment:
Q  504 tgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    |||||||||||| ||||||||||| |||||||||| || ||||||||| |||||||    
T  18368938 tgcaatttttatctgtttgcaacaaagcaagttacctgcttttggttgtagaaaag 18368883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 356 - 445
Target Start/End: Complemental strand, 23100056 - 23099970
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||||| |||||||| ||||| |||||||| ||||||| || |||||| ||||   |||||||||||| |||||||||||| || |||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagta---tcgtatccacatagattgtcgtttcgtccaaaca 23099970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 346 - 462
Target Start/End: Original strand, 5530006 - 5530119
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| | |||||| ||||  ||||||||||||||||||| |||||||||    ||||||||||||  |||| ||||||| || |||||    
T  5530006 tgatggtcggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaag---catcgtatccacagagattttcgtttcgtccaaaca 5530102  T
Q  446 gttcgtgttatttattt 462  Q
     || |||||| ||||||    
T  5530103 atttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 705 - 743
Target Start/End: Complemental strand, 8978682 - 8978644
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  8978682 tgcacctgctgatcgcacggtgatccttacgtgcggggt 8978644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 346 - 462
Target Start/End: Original strand, 18495358 - 18495471
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||  |||||||||||||  ||||| |||||||||| || ||||||||||| |   |||||||   ||||||||||||| ||||||||    
T  18495358 tgatggtcggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaat---gtatccatggggattgtcgtttcgtctaaaca 18495454  T
Q  446 gttcgtgttatttattt 462  Q
     || |||||| ||||||    
T  18495455 atttgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 705 - 778
Target Start/End: Original strand, 10649615 - 10649688
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctct 778  Q
    |||||||||||||||| |||||||| ||| |||||| || |||||||||| || ||||  |||| |||||||||    
T  10649615 tgcacctgttgatcgctcggtgatcattatgtgcggagtttatactatcttgattgattaaggtttatccctct 10649688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 690
Target Start/End: Original strand, 11803211 - 11803393
Alignment:
Q  507 aatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttg 605  Q
    |||||||| |||||||||||| |||||| |||| || ||||||||||||| ||| || || || |||||| | || ||||| || || | ||| || |||    
T  11803211 aatttttagttgtttgcaacagagcaagtttacctg-ttttggttgcagagaagtaaccagcggttaggattattcgaatcccctctgtatat-atattg 11803308  T
Q  606 ttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaaccta 690  Q
    ||||||||||| |||||   ||||| |||||| ||||||||  || | ||||||||||||||| |  |||||||||| ||||||||    
T  11803309 ttggataataagtaaaa-gtatgtcacgtttatttatcttaggtagactatacaagtgatgaggccattgggacgttactaaccta 11803393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 545
Target Start/End: Original strand, 31492914 - 31493107
Alignment:
Q  345 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 444  Q
    |||||||||  || ||| |||||||  ||||| ||||||| |||||||| || |||||| ||||   ||||||||||||||||||||||||  || ||||    
T  31492914 atgatggtcggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagta---tcgtatccacatggattgtcgttttgtccaaac 31493010  T
Q  445 agttcgtgttatttatttaaagttgacgatata--aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgt 542  Q
    | || || ||| ||||||    |  || ||| |  ||||| ||||||| || |||||||  |||||||||||| ||||||||||| ||  ||||||||||    
T  31493011 aatttgttttacttattt----tgaacaataaaataaataaaagagttgagggttagag--tgcaatttttatctgtttgcaacagagtcagttacttgt 31493104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 603 - 683
Target Start/End: Original strand, 1861150 - 1861230
Alignment:
Q  603 ttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttc 683  Q
    |||||||||| ||| ||| ||  |||||| ||||| ||||||||  || |||||||||||||||||  |||||||||||||    
T  1861150 ttgttggatagtaagtaatataaatgtcgggtttatttatcttaggtagaatatacaagtgatgaggttgttgggacgttc 1861230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 620
Target Start/End: Original strand, 6042589 - 6042701
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataatt 602  Q
    ||||||||||||| ||||||||||| || |  |||| | |||||||||||||||||  || || || |||||| | |||||||  ||||||||||||       
T  6042589 ttgcaatttttatatgtttgcaacagagaagtttacctttttttggttgcagaaaaataagcagcggttaggattctttgaat--cccctatttata--- 6042683  T
Q  603 ttgttggataataaataa 620  Q
    |||||||||| |||||||    
T  6042684 ttgttggatattaaataa 6042701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 356 - 514
Target Start/End: Original strand, 12181603 - 12181759
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcat-ctaaacagttcgtgtt 454  Q
    |||||| |||| ||| ||||| ||||  |||||||||| ||  ||||| |||||   |||||||||||| ||||||||||| | | ||||| |||| |||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtac---cgtatccacatgaattgtcgtttcgtcccaaacaattcgagtt 12181699  T
Q  455 atttatttaaagttgacgatataaaatataagagtt-aagagttagaga-ttgcaattttta 514  Q
    | |||||| |||||||||  ||||| || ||||||| ||| |||||||| ||||||||||||    
T  12181700 acttattttaagttgacg--ataaattaaaagagttgaagggttagagatttgcaattttta 12181759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 18467474 - 18467549
Alignment:
Q  384 aagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||||| || ||||||||||| |   ||||||||||||||||||||||| |||||||| ||  ||||| ||||||    
T  18467474 aagtaataaagtgataagtaaagtatt---gtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 754
Target Start/End: Original strand, 1882588 - 1882643
Alignment:
Q  699 tcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatct 754  Q
    ||||| |||||||| || ||||||||||||||||||||||  ||| ||||||||||    
T  1882588 tcaagttgcacctgctggtcgcacggtgatccttacgtgcaaggtttatactatct 1882643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 3735015 - 3735054
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  3735015 ctgcacctgctgatcgcacggtgatccttacgtgcagggt 3735054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 8054155 - 8054085
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 436  Q
    |||||||| ||||| |||||||||||||||| || ||| || ||||   ||||||||||||| |||||||||||    
T  8054155 aagtgtaccaaatcgtttaccaagtaataaagtgataattagagta---tcgtatccacatgaattgtcgtttc 8054085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 9916562 - 9916664
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttat 456  Q
    ||||| |||| ||| ||||||||||||| |||||||| |  |||||| ||||   ||||||||||||||||||| |||||| | ||||| |  ||||||     
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagta---tcgtatccacatggattgtagtttcaaccaaacaatatgtgttac 9916658  T
Q  457 ttattt 462  Q
    ||||||    
T  9916659 ttattt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 9924474 - 9924576
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttat 456  Q
    ||||| |||| ||| ||||||||||||| |||||||| |  |||||| ||||   ||||||||||||||||||| |||||| | ||||| |  ||||||     
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagta---tcgtatccacatggattgtagtttcaaccaaacaatatgtgttac 9924570  T
Q  457 ttattt 462  Q
    ||||||    
T  9924571 ttattt 9924576  T

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Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 13289126 - 13289087
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  13289126 ctgcacatgttgatcgcacgatgatccttacgtgcggggt 13289087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 537
Target Start/End: Complemental strand, 14195937 - 14195898
Alignment:
Q  498 agagattgcaatttttatttgtttgcaacatagcaagtta 537  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  14195937 agagattgcaatttttatctgtttgcaacagagcaagtta 14195898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 16058714 - 16058675
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  16058714 ctgcacctgctgatcgcacggtgacccttacgtgcggggt 16058675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 19153283 - 19153330
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaa 393  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||    
T  19153283 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaa 19153330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 20752682 - 20752729
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaa 393  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||    
T  20752682 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaa 20752729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 734
Target Start/End: Original strand, 31493229 - 31493292
Alignment:
Q  672 gttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttac 734  Q
    |||| ||||||||||||||  ||||| |||||| ||||||||||||||||||  ||||||||||    
T  31493229 gttgtgacgttctaacctaaccggttcgtcaagttgcacctgttgatcgcacaatgatccttac 31493292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 39272853 - 39272814
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  39272853 ctgcacctgttgatcacatggtgatccttacgtgcggggt 39272814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 499 - 545
Target Start/End: Original strand, 140251 - 140297
Alignment:
Q  499 gagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
    |||||||| |||||||| ||||||||||| |||||||||| ||||||    
T  140251 gagattgccatttttatctgtttgcaacagagcaagttacctgtttt 140297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 507 - 557
Target Start/End: Complemental strand, 8293997 - 8293948
Alignment:
Q  507 aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    ||||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  8293997 aatttttatctgtttgcaacagagcaagttacctg-ttttggttgcagaaa 8293948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 705 - 743
Target Start/End: Original strand, 11803421 - 11803459
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  11803421 tgcacttgctgatcgcacggtgatccttacgtgcggggt 11803459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 788
Target Start/End: Complemental strand, 2574448 - 2574360
Alignment:
Q  699 tcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaac 788  Q
    ||||| |||||||| | |||||||||||||||||||||||| ||| | |||| |||| | |||| ||||  ||||||| |||||| ||||    
T  2574448 tcaagttgcacctgctaatcgcacggtgatccttacgtgcgaggtct-tactctctcaattgatttaggcttatccctttgatggctaac 2574360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 743
Target Start/End: Complemental strand, 16223936 - 16223867
Alignment:
Q  674 tgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||  ||||||| |  ||||||||| |||||||| || |||||||||||||||||| || |||||    
T  16223936 tgggacgtgataacctaattagttgtcaagttgcacctgctggtcgcacggtgatccttacatgtggggt 16223867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 462
Target Start/End: Complemental strand, 18369077 - 18368981
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||||||||  |||||||||||||||| || |||||| ||   ||| ||||||| | ||||||||||||| || ||||| |||  |||| ||||||    
T  18369077 aagtgtactaaatagtttaccaagtaataaagtgataagtagag---tattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattt 18368981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 225; Significance: 1e-123; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 346 - 817
Target Start/End: Complemental strand, 168412 - 167949
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| ||||||||||||| |||||| |    
T  168412 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccaca-ggattgtcgtttcttctaaata 168317  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
    | |||||||| |||||| ||||||||||||||||||| ||||  |||| |||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  168316 gctcgtgttacttattttaagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttt 168217  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    |||||| ||||||||||||| || |||||||| |||||||| ||||| ||||||   |||||||||||||||||| || |  ||||||||||||||||||    
T  168216 tggttgtagaaaaggaaacaacggttaggactctttgaatc-cccctgtttata---ttgttggataataaataacattctagtcgcgtttagttatctt 168121  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgt 745  Q
    || || | ||||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |    
T  168120 aactagactatacaagtgacgaggtcgttgggacgttctaacctagtcagttgtcaagctgcacctgttgatcgcacggtgatccatacgtgtggggtct 168021  T
Q  746 atactatctcgactgatctaggtctatccctctgatgggtaacttca-ctgctggatcgcatgatgatcctta 817  Q
    |||||||||||  |||||||||| |||||||| ||||| ||||| || || || ||||||| |||||||||||    
T  168020 atactatctcggttgatctaggtatatccctccgatggctaactgcacctact-gatcgcacgatgatcctta 167949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 346 - 822
Target Start/End: Complemental strand, 28933774 - 28933304
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| | ||  |||| ||| ||||||| || |||||| ||||   ||||||||||| ||||| ||||||| || |||||    
T  28933774 tgatggtcggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagta---tcgtatccacaaggattatcgtttcgtccaaaca 28933678  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
     || |||||  |||||| ||||||| ||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  28933677 atttgtgttgcttattttaagttgatgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacttgttct 28933578  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    |||||||| ||||||||||| || |||||||| |||||||| |||||  || |||||| |||||||| ||||||| || |||||| | ||||||||| ||    
T  28933577 tggttgca-aaaaggaaacagcggttaggactctttgaatccccccttatt-taattt-gttggatattaaataacattcatgtcacatttagttatatt 28933481  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgt 745  Q
    || || | |||||||||||||||   ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  28933480 aagtagactatacaagtgatgaggtcgttgggatgttctaacctagtcgggtgtcaagctgcacctgttgatcgcacggtgatccttacgtgtggggtct 28933381  T
Q  746 atactatctcgactgatctaggtctatccctctgatgggtaacttcactgctggatcgcatgatgatccttacgtgc 822  Q
    |||||||||||| |||||||||| |||||||| ||||| ||||| ||||  | ||||||| | ||||||||||||||    
T  28933380 atactatctcgattgatctaggtttatccctccgatggctaactgcacttgttgatcgcacggtgatccttacgtgc 28933304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 346 - 857
Target Start/End: Original strand, 21907417 - 21907924
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||| ||| ||||| |||||||||||||||| || |||||||||||   ||||||||||| ||||||||||||| || ||| |    
T  21907417 tgatggtcggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagta---tcgtatccacaaggattgtcgtttcgtccaaaaa 21907513  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgca--atttttatttgtttgcaacatagcaagttacttgtt 543  Q
      ||| |||| ||| || ||||||| ||||||||||| ||||| |||| |||||| ||| ||  |||||||| ||||||||||| |||||||||  | ||    
T  21907514 agtcgcgttacttaatttaagttgatgatataaaataaaagagataagggttagaaattacataatttttatctgtttgcaacagagcaagttagctatt 21907613  T
Q  544 tttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatc 643  Q
    |||||||||| ||||||||||| || ||| |||| |||||||| ||| ||||||    ||||||||||| ||||||| || ||||||| |||||||||||    
T  21907614 tttggttgcaaaaaaggaaacagcggttacgactctttgaatc-cccttatttac---tttgttggatattaaataacattcatgtcgtgtttagttatc 21907709  T
Q  644 ttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgc-gggg 742  Q
    |||| || | |||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||  ||| |||||||||| |||| ||||    
T  21907710 ttaagtagactatacaagtgatgaggttgttggtacgttctaacctagtcggttgtcaagctgcacctgctgatgacacagtgatccttatgtgcggggg 21907809  T
Q  743 tgtatactatctcgactgatctaggtctatccctctgatgggtaacttcac-tgctggatcgcatgatgatccttacgtgcaggg-ctttgtaattcaaa 840  Q
    |  |||||||||||| |||||||||||||||| || ||||| ||| | ||| || | ||||||| | |||||||||||||||||| |||  |||||||||    
T  21907810 tcaatactatctcgattgatctaggtctatccatccgatggctaagtgcacatgat-gatcgcacggtgatccttacgtgcagggtcttactaattcaaa 21907908  T
Q  841 agttaattgacacatag 857  Q
    || ||||||| ||||||    
T  21907909 ag-taattgaaacatag 21907924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 410 - 783
Target Start/End: Complemental strand, 6630745 - 6630375
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 509  Q
    ||||| |||||||| |||||||||||| ||||||| | | | |||| |||||| |||||||| |||||||||| ||||  |||  |||||||||||||||    
T  6630745 tatcggatccacatagattgtcgtttcgtctaaaccgcttgcgttacttattttaagttgacaatataaaataaaagatataaaggttagagattgcaat 6630646  T
Q  510 ttttatttgttt-gcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttg 608  Q
    |||||||| ||| |||||| |||||||||| |||||||||||||| ||| ||||| | || |||||||| ||||||| |||||||||||||   ||||||    
T  6630645 ttttattttttttgcaacagagcaagttacctgtttttggttgcaaaaatggaaatagcggttaggactctttgaat-acccctatttata---ttgttg 6630550  T
Q  609 gataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgca 708  Q
    |||||||||||| || |||||||||||| |||||||||| || | ||||||||||||| |   |||| ||| |||||||||| |||||||||||||||||    
T  6630549 gataataaataacattcatgtcgcgttttgttatcttaagtagactatacaagtgatgggtacgttgagacattctaacctactcggttgtcaagctgca 6630450  T
Q  709 cctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgg 783  Q
    || | |||||||||| |||||||||||||   ||| ||||||||||||  ||||| |||| ||||| ||| ||||    
T  6630449 ccagctgatcgcacgatgatccttacgtgaaaggtttatactatctcggttgatccaggtatatccttctaatgg 6630375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 343 - 794
Target Start/End: Original strand, 11176932 - 11177359
Alignment:
Q  343 taatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaa 442  Q
    |||||||||||  |||||| ||||||||  |||| |||||| |||| |||| || |||||| ||||   |||||||||||||| |||||||||| || ||    
T  11176932 taatgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagta---tcgtatccacatgggttgtcgtttcttcgaa 11177028  T
Q  443 acagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgt 542  Q
    | | ||||||||| |||||| || |||||||||||||||| ||||| |||| |||||| ||||||||||||||  ||||||||||||||||||||| |||    
T  11177029 ataattcgtgttacttattttaaattgacgatataaaataaaagagataagggttagaaattgcaatttttataagtttgcaacatagcaagttacctgt 11177128  T
Q  543 ttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttat 642  Q
    |||| ||| || ||||||||||| || |||||||| ||| |||| || ||||||   | ||||||||||| | ||||| ||                  |    
T  11177129 tttttgttacataaaaggaaacagcggttaggactctttaaatcccctctattt---actttgttggatattgaataacat------------------t 11177207  T
Q  643 cttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    | | |||| | |||||||||||||||| ||||||||| ||||| |||| |||||||||||| |||||||| | ||||||| |||||||||||||| ||||    
T  11177208 cattaatagactatacaagtgatgagattgttgggacattctagcctaatcggttgtcaagttgcacctgcttatcgcacagtgatccttacgtgtgggg 11177307  T
Q  743 tgtatactatctcgactgatctaggtctatccctctgatgggtaacttcact 794  Q
    | ||||||||||||  |||| ||||| |||||||||||||| ||||| ||||    
T  11177308 tctatactatctcggttgatttaggtttatccctctgatggctaactgcact 11177359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 470 - 777
Target Start/End: Original strand, 8241381 - 8241679
Alignment:
Q  470 acgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgt 569  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||||| ||||||| || || |      
T  8241381 acgatataaaataaaagagttaagagttagagattgcaatttttatctgtttgcaacatagcaagttacctg--tttggttgtagaaaagtaagcagcag 8241478  T
Q  570 ttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgaga 669  Q
    ||| ||||||||||||| |||||||||   ||||||||||| | ||||||| || ||||||||||||| ||||||||| || |  ||||||||||||||     
T  8241479 tta-gactttttgaatc-cccctattt---attttgttgga-attaaataacattcatgtcgcgtttatttatcttaagtagacaatacaagtgatgagg 8241572  T
Q  670 ctgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtc 769  Q
      |||| || ||||||||||| || ||| ||||||| |||||| |||||||   |||||||||||||||  ||| ||||||||||||  ||||||||||     
T  8241573 gcgttgcgatgttctaacctattcagttttcaagcttcacctgctgatcgc-tagtgatccttacgtgcaaggtctatactatctcggttgatctaggta 8241671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 346 - 840
Target Start/End: Original strand, 22567825 - 22568311
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||  |||||||||||||||  ||  ||||| |||| |   ||||||||||||||||| ||||| || |||||    
T  22567825 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtatt---gtatccacatggattgtggtttcgtccaaaca 22567921  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
      ||  |||| |||||| ||||| ||||||||||||| ||| |||||| ||||||||||| || |||||| ||||||||||| ||  |||||| |   ||    
T  22567922 actcacgttacttattttaagttaacgatataaaataaaagggttaagggttagagattgtaa-ttttatctgtttgcaacagagtcagttacct-agtt 22568019  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    |||||||||||||| || || || | | |||| ||||||| ||||||||||    |||||||||||  ||||||| ||  |||| || ||||||||||||    
T  22568020 tggttgcagaaaagtaagcaacggtaatgactctttgaat-acccctattt---gttttgttggat-ttaaataacatttatgttgcatttagttatctt 22568114  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgt 745  Q
    || || |||||||||||||||||   ||||||| |||||||||||||||| ||| ||| ||||| || | |||| | |||||||||||||||| || | |    
T  22568115 aagtagaatatacaagtgatgaggtcgttgggatgttctaacctagtcgggtgtaaagttgcacatgctaatcgtatggtgatccttacgtgcaggttct 22568214  T
Q  746 atactatctcgactgatc--taggtctatccctctgatgggtaacttcactgctggatcgcatgatgatccttacgtgcagggctttgtaattcaaa 840  Q
    |||||||||| | |||||  |||||||||| ||| |||||  |||| |||   | ||||||| |||||||||||||||  || |||| |||||||||    
T  22568215 atactatctcaattgatctataggtctatctctccgatggccaactgcacatgttgatcgcacgatgatccttacgtgtgggtctttataattcaaa 22568311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 363 - 777
Target Start/End: Original strand, 4339737 - 4340142
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||  |||| ||| ||||||| || |||||| |||| |   |||||||||  |||||||||||  || || || ||||  ||| ||||||    
T  4339737 aagtgtaccaaattgtttatcaaataataaagtgataagtagagtatt---gtatccacaatgattgtcgttttgtccaaccaattcgcattacttattt 4339833  T
Q  463 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaa 562  Q
     |  |||||||||||||||| ||||| |||| |||||||||| |||| ||||||||||||||||  |||||||||| |||||| ||||||||||||| ||    
T  4339834 tagtttgacgatataaaataaaagagataagggttagagattacaatatttatttgtttgcaactaagcaagttacctgtttt-ggttgcagaaaagtaa 4339932  T
Q  563 acatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagt 662  Q
     || || | |||  || || ||||  ||||||||||    |||||||||| ||||||| |  |||||| | |||| |||||||||||| | |||| ||||    
T  4339933 ccagcggtcaggg-ttcttcaatcctccctatttat----ttgttggatattaaataacagtcatgtcacatttatttatcttaaatagactatataagt 4340027  T
Q  663 gatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgat 762  Q
    |||||| | ||||||||||||||| ||| || | |||||||||||| |||||||| ||||  |||| |||||||||||||| ||||||||||||  ||||    
T  4340028 gatgaggccgttgggacgttctaatctaatcagctgtcaagctgcatctgttgattgcacaatgattcttacgtgcggggtctatactatctcggttgat 4340127  T
Q  763 ctaggtctatccctc 777  Q
     | ||||||||||||    
T  4340128 ttcggtctatccctc 4340142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 620 - 783
Target Start/End: Complemental strand, 21688699 - 21688536
Alignment:
Q  620 aaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcg 719  Q
    |||| ||||||||||||||| ||||||| || | |||||||||||| || || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21688699 aaattcatgtcgcgtttagtcatcttaagtagactatacaagtgataagtctattgggacgttctaaccaagtcggttgtcaagctgcacctgttgatcg 21688600  T
Q  720 cacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgg 783  Q
    |||||||| ||||| ||| ||||| ||||||||||||  ||||||||||||||||||| |||||    
T  21688599 cacggtgacccttatgtgtggggtatatactatctcggttgatctaggtctatccctccgatgg 21688536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 459 - 822
Target Start/End: Original strand, 19244668 - 19245029
Alignment:
Q  459 atttaaagttgacgatataaaatataagagttaagagttagagattgcaattttt-atttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    |||| ||||||| ||||||||||| ||||| | || ||||||||||||| ||||| |  ||||||||||| |||||||||| || ||| ||||| |||||    
T  19244668 attttaagttgatgatataaaataaaagagatgagggttagagattgcactttttgaactgtttgcaacagagcaagttacctggttt-ggttgtagaaa 19244766  T
Q  558 aggaaacatcgtttaggactttttgaatcacccc-tatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatat 656  Q
    || ||  |  | | |||| | |||||||  |||| ||||| |   || |||  ||| ||||||| || || |||  ||||||||||||||| |  | |||    
T  19244767 agtaagtagtggtaaggattctttgaatgcccccatatttgt---ttcgttaaatattaaataacattcacgtcatgtttagttatcttaagttgagtat 19244863  T
Q  657 acaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcg 756  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| || |    
T  19244864 acaagtgatgaggctgttaggacgttctaacctagtcggtcgtcaagctgcacctgctgatcgcacggtgatccctacgtgcggggtctatactaacttg 19244963  T
Q  757 actgatctaggtctatccctctgatgggtaacttcactgctggatcgcatgatgatccttacgtgc 822  Q
      |||||||||| |||||||||||||  ||||| |||   | ||||||| ||||||||||| ||||    
T  19244964 gttgatctaggtatatccctctgatgactaactgcacatgttgatcgcacgatgatccttatgtgc 19245029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 356 - 782
Target Start/End: Original strand, 15466365 - 15466778
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| ||| | ||| ||||   ||||||| | | |||||||| |||| |||||||| |||| ||||    
T  15466365 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgt-acgtagagta---tcgtatcaatagggattgtcatttcgtctaaacaattcgcgtta 15466460  T
Q  456 tttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 554  Q
     ||||||    || ||||||||| |||| |||||||||| |||||||||||||| |||||| ||||||||||| |||||||||| | |||  ||||||||    
T  15466461 gttattttgttttaacgatataataataaaagagttaagggttagagattgcaaattttatctgtttgcaacagagcaagttacctattt--ggttgcag 15466558  T
Q  555 aaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaat 654  Q
    ||||| ||||| || |||| ||| ||  |||| || |||| |      |||||||| | ||||||| ||  ||||| |||||||||||||||| || | |    
T  15466559 aaaagtaaacagcggttagaactcttcaaatc-cctctatct------ttgttgga-attaaataacatttatgtcacgtttagttatcttaagtagact 15466650  T
Q  655 atacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatct 754  Q
    |||||| ||||||| | |||||||||| |||||||| |||||||| ||| ||||| |  |||||||| | |||||||||||||  |||| ||||||||||    
T  15466651 atacaaatgatgaggccgttgggacgtcctaacctactcggttgttaagatgcacatactgatcgcatgatgatccttacgtgtagggtctatactatct 15466750  T
Q  755 cgactgatctaggtctatccctctgatg 782  Q
    ||  |||| || || ||||||| |||||    
T  15466751 cggttgatttaagtatatccctttgatg 15466778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 363 - 599
Target Start/End: Complemental strand, 12183428 - 12183196
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   |||||||||||||||||||| |||| ||  |||| |||  |||| ||||||    
T  12183428 aagtgtaccaaatcgtttaccaagtaataaagtgataagtacagta---tcgtatccacatggattgtcatttcgtcctaacaattcacgttacttattt 12183332  T
Q  463 aaagttgacgatataaaatataagagttaagag-ttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagga 561  Q
     ||| ||||||||||||||| ||||||| | || |||||||||||||| ||||| |||||||||||||||||||||| || |||||||| |||||||| |    
T  12183331 taaggtgacgatataaaataaaagagtttaaaggttagagattgcaatgtttatctgtttgcaacatagcaagttacctg-ttttggttacagaaaagta 12183233  T
Q  562 aacatcgtttaggactttttgaatcacccctatttata 599  Q
    | || || |||||| | || ||||| ||||||||||||    
T  12183232 agcaacggttaggattcttcgaatc-cccctatttata 12183196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 414 - 777
Target Start/End: Original strand, 9838406 - 9838761
Alignment:
Q  414 gtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaattttt 513  Q
    |||||||||||||||||| |||  |  |||||  ||| |||| |||||| |  |||||||||||||||| |||||| ||| ||||||||||| |||||||    
T  9838406 gtatccacatggattgtcattttgttgaaacaactcgcgttacttattttagtttgacgatataaaataaaagagtgaagcgttagagattgtaattttt 9838505  T
Q  514 atttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataa 613  Q
    || ||||||||| | ||||||||||  | ||||||||||||||||| || ||  | |||||| | ||  |||| ||||||| ||    |||| | ||||     
T  9838506 atctgtttgcaaaagagcaagttacccg-ttttggttgcagaaaagtaagcaatggttaggattcttcaaatc-cccctatgta----tttgctagatat 9838599  T
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgt 713  Q
    ||||||  |  ||||||| ||||| ||||||||| || | |||||||||||||||   ||||||| |||| ||| ||  ||||||| ||||||||||||     
T  9838600 taaatattagtcatgtcgtgtttatttatcttaattagactatacaagtgatgaggtcgttgggaagttc-aacataagcggttgttaagctgcacctgc 9838698  T
Q  714 tgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
     ||||||||| ||||||||||||| ||||| ||||||| ||||  ||| |||||||||||||||    
T  9838699 cgatcgcacgatgatccttacgtgtggggtctatactaactcggttga-ctaggtctatccctc 9838761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 356 - 749
Target Start/End: Complemental strand, 21672539 - 21672152
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| ||||| || ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||| || |||| || ||||| |||||||||    
T  21672539 attaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattatcttttcgtccaaacaattcgtgtta 21672443  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagag-ttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     || |||  ||||||||||| || | |||||||||||  | ||||||||| ||||||||||| | ||||||||  |||||||||| |||||| | |||||    
T  21672442 cttttttttagttgacgataaaata-ataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgttttcg-ttgca 21672345  T
Q  554 gaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaa 653  Q
     ||||| ||    || |||||| | ||| |||| |||||||||||    || ||||||| |||||||||   |||||| ||||| ||||||||  || |     
T  21672344 taaaagtaagtggcggttaggaatatttcaatcccccctatttat----tttttggatattaaataaaagtaatgtcgtgtttatttatcttaggtagac 21672249  T
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatac 749  Q
    |||| ||||||||||   ||||||| ||| |||||||| ||||| |||||| |||||||| | |||   |||||||||||||||| ||||| |||||    
T  21672248 tatataagtgatgaggtcgttgggatgttactaacctaatcggtcgtcaagttgcacctgctcatcatgcggtgatccttacgtgtggggtctatac 21672152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 356 - 749
Target Start/End: Complemental strand, 21679955 - 21679568
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| ||||| || ||||| ||||| |||||||||| || |||||| ||||   ||||||||||||||||| || |||| || ||||| |||||||||    
T  21679955 attaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagta---tcgtatccacatggattatcttttcgtccaaacaattcgtgtta 21679859  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagag-ttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     || |||  ||||||||||| || | |||||||||||  | ||||||||| ||||||||||| | ||||||||  |||||||||| |||||| | |||||    
T  21679858 cttttttttagttgacgataaaata-ataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgttttcg-ttgca 21679761  T
Q  554 gaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaa 653  Q
     ||||| ||    || |||||| | ||| |||| |||||||||||    || ||||||| |||||||||   |||||| ||||| ||||||||  || |     
T  21679760 taaaagtaagtggcggttaggaatatttcaatcccccctatttat----tttttggatattaaataaaagtaatgtcgtgtttatttatcttaggtagac 21679665  T
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatac 749  Q
    |||| ||||||||||   ||||||| ||| |||||||| ||||| |||||| |||||||| | |||   |||||||||||||||| ||||| |||||    
T  21679664 tatataagtgatgaggtcgttgggatgttactaacctaatcggtcgtcaagttgcacctgctcatcatgcggtgatccttacgtgtggggtctatac 21679568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 410 - 559
Target Start/End: Complemental strand, 17827145 - 17827000
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagtt-gacgatataaaatataagagttaagagttagagattgcaa 508  Q
    ||||||||||||||||||||||||||| || ||||| |||| |||| ||||||    || ||| |||||||| ||||| ||||| ||    || ||||||    
T  17827145 tatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattttttttttgacaatataaaagataagggttaaaag----ag-ttgcaa 17827051  T
Q  509 tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  17827050 tttttatatgtttgcaacatagcagtttacttgtttttggttgcagaaaag 17827000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 378 - 748
Target Start/End: Complemental strand, 22410409 - 22410050
Alignment:
Q  378 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttattta-tttaaagttgacgatat 476  Q
    ||||||||||||||||||| |||||| ||||   ||||||||||| |||||||||||||||  ||||| |||  |||| ||| ||| |||||||||||||    
T  22410409 tttaccaagtaataaaatgataagtagagta---tcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatat 22410313  T
Q  477 aaaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttagg 574  Q
    |    |||| || |||| ||||| |  ||||||||||||| ||||||||||| |||||| || | | ||||||||||||| ||||||| || ||  |||     
T  22410312 a----ataaaagataagggttagaatcttgcaatttttatctgtttgcaacagagcaagttttcctatttttggttgcag-aaaggaagcagcggctag- 22410219  T
Q  575 actttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatc-ttaaataaaatatacaagtgatgagactgt 673  Q
        || ||||| || | |||||||   |||||||||| ||||||| |  ||||| | ||||| ||||| ||| ||| | ||||||||||||||| ||||    
T  22410218 ---attcgaatcccctcaatttata---ttgttggatattaaataacagtcatgttgtgtttatttatctttacatagactatacaagtgatgaggctgt 22410125  T
Q  674 tgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtata 748  Q
    ||||||||| ||||| || |  ||||  || ||||||||| ||||| ||||||||||| |||||| ||||| ||||    
T  22410124 tgggacgttactaacttaatatgttg-gaaactgcacctggtgatcacacggtgatccatacgtgtggggtctata 22410050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 366 - 559
Target Start/End: Complemental strand, 23645861 - 23645672
Alignment:
Q  366 tgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaa 465  Q
    ||||| ||||| |||||||||||||||| || |||||| ||   ||||||||||| | ||||||||||||| || ||||| ||   |||| ||||||       
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattattt--- 23645768  T
Q  466 gttg-acgat---ataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
     ||| || ||   |||||||| ||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||    
T  23645767 -ttgaacaataaaataaaataaaagagttgagggttagagattgcaatttttatttgtttgcaacagagcaagttacatg-ttttggttgcataaaag 23645672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 356 - 748
Target Start/End: Complemental strand, 27737793 - 27737408
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||||||||| |||||||||||||||| || |||||| ||   |||| || ||||| ||||||| ||||| || ||||| |||| ||||    
T  27737793 attaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagag---tatcatacccacaaggattgttgtttcgtccaaacaattcgcgtta 27737697  T
Q  456 tttattt---aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggtt 550  Q
     ||||||    |||||||||  |||||||  ||||  |||| |||||||| ||||||||||||| ||||||||||| |||||| |||| ||||||| |||    
T  27737696 cttatttttgtaagttgacg--ataaaatgaaaga--taagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctgttttt-gtt 27737602  T
Q  551 gcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaata 650  Q
    ||| ||||| || || || |||||| | || ||||| | ||  ||||||   || ||||||| ||||||| |   ||||| | || | ||||||||  ||    
T  27737601 gcaaaaaagtaagcagcggttaggattcttcgaatc-ctccattttata---ttattggatattaaataacagtaatgtcacattcatttatcttacgta 27737506  T
Q  651 aaatatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtata 748  Q
     | ||||||||||||||| | |||||||| |  |||||||||  | |||  ||||||||| |||||||| |||| ||||||||||||| ||||| ||||    
T  27737505 gactatacaagtgatgaggccgttgggacatgactaacctagaagattg-gaagctgcacatgttgatcacacgatgatccttacgtgtggggtttata 27737408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 346 - 462
Target Start/End: Original strand, 9726007 - 9726120
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| || |||||| ||   ||||||||||||||||||||||||||| || |||||    
T  9726007 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacatggattgtcgtttcgtccaaaca 9726103  T
Q  446 gttcgtgttatttattt 462  Q
     || | |||| ||||||    
T  9726104 atttgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 503 - 748
Target Start/End: Complemental strand, 14079419 - 14079176
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataat 601  Q
    ||||||||||||| ||||||||||| || ||| || | | ||||||||| |||||||| || || || |||| | | || ||||  ||||||||||||      
T  14079419 ttgcaatttttatctgtttgcaacaaaggaagttttcctatttttggttacagaaaagtaagcagcggttagaattcttcgaattccccctatttata-- 14079322  T
Q  602 tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtc 700  Q
     |||||||||| ||||||| |  ||||||| ||||| |||||||   || | ||||||||| ||||| | |||||||| | ||||||||||| |||||      
T  14079321 -ttgttggatattaaataacagtcatgtcgtgtttatttatctttggtagactatacaagttatgaggccgttgggacatgtctaacctagtaggttg-g 14079224  T
Q  701 aagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtata 748  Q
    || ||||||||| ||||| ||||||||| ||||| || ||||| ||||    
T  14079223 aaactgcacctgctgatcacacggtgattcttacatgtggggtctata 14079176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 512 - 777
Target Start/End: Original strand, 1635110 - 1635371
Alignment:
Q  512 ttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggat 611  Q
    |||| ||||||||||| |||||||||| |||||| ||||| ||||||| ||||| || |||||| | || ||||| || |||   || ||| ||||||||    
T  1635110 ttatctgtttgcaacaaagcaagttacatgtttt-ggttgtagaaaagtaaacagcggttaggattcttcgaatctccgcta---atgattatgttggat 1635205  T
Q  612 aataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacc 710  Q
    | ||||||  |  ||||||| |||||  ||| |||  || | |||| ||||||||||   |||| |||||| ||||||||| |||| |||||| |||||     
T  1635206 attaaatagcagtcatgtcgtgtttatctattttaggtagactataaaagtgatgaggtcgttgagacgtttctaacctagccggtcgtcaagttgcact 1635305  T
Q  711 tgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    || ||||| || ||||||| ||||||| | ||| |||||||||||   ||| |||||||||||||||    
T  1635306 tgctgatcacatggtgatctttacgtgtgaggtctatactatctcagttga-ctaggtctatccctc 1635371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 356 - 522
Target Start/End: Complemental strand, 21688899 - 21688736
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| ||||||||  |||| ||||| ||||||| || || |||||| |||| |   ||||||| | ||||||||||| |||| ||| | |||| ||||    
T  21688899 attaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtatt---gtatccatagggattgtcgttacatccaaaaaattcgcgtta 21688803  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttg 522  Q
     ||||||  |||||| ||||||||||| ||||||||   |||||||||||| |||||||| ||||||    
T  21688802 cttattttgagttgaagatataaaataaaagagttagaggttagagattgcgatttttatatgtttg 21688736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 425 - 525
Target Start/End: Complemental strand, 8039177 - 8039074
Alignment:
Q  425 gattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa----aatataagagttaagagttagagattgcaatttttatttgtt 520  Q
    ||||||||||||||| ||||| ||||||||| ||||||    ||||||||||||    |||| |||||||||| ||||||||||||||||||||| ||||    
T  8039177 gattgtcgtttcatccaaacaattcgtgttacttattttgt-ttgacgatataataataataaaagagttaagggttagagattgcaatttttatatgtt 8039079  T
Q  521 tgcaa 525  Q
    |||||    
T  8039078 tgcaa 8039074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 356 - 478
Target Start/End: Original strand, 23143717 - 23143838
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| |||||||||||||| ||||||| || |||||| ||   |||| |||||||| ||||||||||||| || ||||| ||| |||||    
T  23143717 attaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagag---tatcatatccacagggattgtcgtttcgtccaaacaattcatgtta 23143813  T
Q  456 tttattt--aaagttgacgatataa 478  Q
     ||||||   |||||||||||||||    
T  23143814 cttattttgtaagttgacgatataa 23143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 654 - 743
Target Start/End: Original strand, 14072371 - 14072461
Alignment:
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||||||||| | ||||||||||| |||||||||||||| |||||| |||||||| |||||||||  |||||  |||||| |||||    
T  14072371 tatacaagtgatgagcccgttgggacgtttctaacctagtcggtcgtcaagttgcacctgctgatcgcacaatgatcaatacgtgtggggt 14072461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 346 - 595
Target Start/End: Complemental strand, 22566276 - 22566030
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  ||| ||||| ||||| |||| ||||||||||||||||| || |||||| ||||   || |||||||| | ||||||| ||| ||||| ||    
T  22566276 tgatggtcgaattgggtaaatgtaccaaattatttaccaagtaataaagtgataagtagagta---tcatatccacaagaattgtcgcttcgtctaagca 22566180  T
Q  446 gttcgtgttatttatttaaagttgacgatata-aaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaagttacttgtt 543  Q
     |||| |||| ||||||   ||| || | ||| ||||  ||||||| |||| ||  |||||||||||||||| |||||||||||   |||||||| | ||    
T  22566179 attcgcgttacttatttg--gttaacaaaatataaattaaagagttgagagataatagattgcaatttttatctgtttgcaacactacaagttacctatt 22566082  T
Q  544 tttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatt 595  Q
    |||| ||| ||||||| || || || |||||| |||||||||| || |||||    
T  22566081 tttgattgtagaaaagtaagcagcggttaggattttttgaatctcctctatt 22566030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 663 - 743
Target Start/End: Original strand, 2586996 - 2587077
Alignment:
Q  663 gatgagactgttgggacgttctaacctagtcgg-ttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||| ||||||||||||||||||||| |||| || ||||| |||||||| || |||||||||||||||| | ||||||||    
T  2586996 gatgagtctgttgggacgttctaacctaatcggtttttcaagttgcacctgctggtcgcacggtgatccttgcatgcggggt 2587077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 485
Target Start/End: Original strand, 9516787 - 9516909
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||| ||||||||| || |||||| ||||   ||||||||||||||||||||||||| || |||||  ||| |||| ||||||    
T  9516787 aagtgtaccaaatcgtttacctagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattt 9516883  T
Q  463 ---aaagttgacgatataaaatataa 485  Q
        ||||||||||||||||| ||||    
T  9516884 ttgtaagttgacgatataaaagataa 9516909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 672 - 755
Target Start/End: Complemental strand, 18075212 - 18075128
Alignment:
Q  672 gttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    ||||||||||| |||||||| || || || ||| |||||||||||||| |||| ||||||||||||| ||||| |||||||||||    
T  18075212 gttgggacgttactaacctaatcagtcgttaagttgcacctgttgatcacacgatgatccttacgtgtggggtctatactatctc 18075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 503 - 678
Target Start/End: Complemental strand, 20005879 - 20005704
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataat 601  Q
    ||||||||||||||||||||||||| ||| || |||| |||||||||||||||||| | |  || || ||| || | || ||||| || || | ||| ||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattcttcgaatcccctctgtatat-at 20005781  T
Q  602 tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggga 678  Q
     |||||||||||||||||| ||  |||||| ||||| ||||||||  || | |||| |||||||||| | |||||||    
T  20005780 gttgttggataataaataatataaatgtcgagtttatttatcttaggtagactatataagtgatgaggccgttggga 20005704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 656 - 743
Target Start/End: Complemental strand, 20144915 - 20144827
Alignment:
Q  656 tacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||   ||||||||||| |||||||||||||| |||||| || ||||  |||||||  |||||||||||||||||||||    
T  20144915 tacaagtgatgaggtcgttgggacgtttctaacctagtcggtcgtcaagttgaaccttctgatcgcttggtgatccttacgtgcggggt 20144827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 656 - 743
Target Start/End: Original strand, 22187924 - 22188012
Alignment:
Q  656 tacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||   ||||||||||| |||||||||||||| |||||| || ||||  |||||||  |||||||||||||||||||||    
T  22187924 tacaagtgatgaggtcgttgggacgtttctaacctagtcggtcgtcaagttgaaccttctgatcgcttggtgatccttacgtgcggggt 22188012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 356 - 436
Target Start/End: Original strand, 17729147 - 17729224
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 436  Q
    ||||||||||||||| ||||| |||||||||||||||| || |||||| ||   |||||||||||||  ||||||||||||    
T  17729147 attaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacaaagattgtcgtttc 17729224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 545
Target Start/End: Complemental strand, 25927417 - 25927223
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||| | |||||||||||||||| || |||||| | ||   ||||||||||||||||| | ||||| || |||||    
T  25927417 tgatggtcggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaata---tcgtatccacatggattttagtttcgtccaaaca 25927321  T
Q  446 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagtta-gagattgcaatttttatttgtttgcaacatagcaagttacttgtt 543  Q
     |||  |||| |||||  ||    || ||| || |||| ||||||| || |||| ||||||||||||||||| ||||||||| | |||||||||| ||||    
T  25927320 attcacgttacttattctaa----acaataaaataataaaagagtttagggttaagagattgcaatttttatctgtttgcaatagagcaagttacctgtt 25927225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 362 - 599
Target Start/End: Complemental strand, 23844563 - 23844329
Alignment:
Q  362 taagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatt 461  Q
    ||||||||| ||||| ||||||||||||||||||| |||||| ||   |||| |||| | | ||||||||||||| || |||||  ||| |||| |||||    
T  23844563 taagtgtaccaaatcgtttaccaagtaataaaatgataagtagag---tatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatt 23844467  T
Q  462 t---aaagttgacgatataaaatataagagttaagagttagaga--ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcaga 555  Q
    |    ||||||||||||||||| ||||     ||| |||||| |  ||||||||||||| ||||||||| | | |||| |||| || ||||||||||| |    
T  23844466 tttgtaagttgacgatataaaagataa-----aagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctg-ttttggttgcata 23844373  T
Q  556 aaaggaaacatcgtttaggactttttgaatcacccctatttata 599  Q
    |||| || || || |||||| |||| ||||| | ||| ||||||    
T  23844372 aaagtaagcagcggttaggatttttcgaatccctcctgtttata 23844329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 11136297 - 11136336
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  11136297 ctgcacctgctgatcgcacggtgatccttacgtgcggggt 11136336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 28933338 - 28933299
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  28933338 ctgcacttgttgatcgcacggtgatccttacgtgcggggt 28933299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 705 - 743
Target Start/End: Original strand, 14637973 - 14638011
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  14637973 tgcacctgctgatcgcacggtgatccttacgtgcggggt 14638011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 557
Target Start/End: Complemental strand, 24252282 - 24252137
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttga-cgatataa--aatataagagttaagagttagagattgc 506  Q
    ||||||||||||||||||||||||||  || ||||| ||| ||||| ||||||    |||| | ||| ||  |||| ||||| | || |||||| ||||     
T  24252282 tatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttattt----ttgaacaataaaataaataaaagagatgagggttagatattgt 24252187  T
Q  507 aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    ||||||||| ||||||||||| |||||||| | || |||||||||||||||    
T  24252186 aatttttatctgtttgcaacagagcaagtttcgtg-ttttggttgcagaaa 24252137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 614 - 742
Target Start/End: Complemental strand, 24252093 - 24251964
Alignment:
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctg 712  Q
    ||||||| || ||||||||||||| ||||  ||| || | |||  |||||||||| ||||||||||||||||| ||| || ||| |||||| |||| |||    
T  24252093 taaataacattcatgtcgcgtttaattattctaagtagactatctaagtgatgagtctgttgggacgttctaatctaatcagttcgtcaagttgcatctg 24251994  T
Q  713 ttgatcgcacggtgatccttacgtgcgggg 742  Q
     ||||||||   ||||||| ||||| ||||    
T  24251993 ctgatcgcaaaatgatcctcacgtgtgggg 24251964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 559
Target Start/End: Complemental strand, 22813680 - 22813625
Alignment:
Q  504 tgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    |||||||||||||||||||||||| |||||| |||| || |||||||||||||||||    
T  22813680 tgcaatttttatttgtttgcaacaaagcaagtttacctg-ttttggttgcagaaaag 22813625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 20005619 - 20005580
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  20005619 ctgcacctgttgattgcacgatgatccttacgtgcggggt 20005580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 22813444 - 22813405
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  22813444 ctgcacctgctgatcgcacggtgatccttacctgcggggt 22813405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 27124589 - 27124519
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 436  Q
    |||||||| ||||| |||||||||||||||| || ||| ||   || ||||||||| |||||||||||||||||    
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataatta---tattatcgtatcgacatggattgtcgtttc 27124519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 614 - 664
Target Start/End: Complemental strand, 9898816 - 9898766
Alignment:
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtga 664  Q
    ||||||| || ||||||||||||||||||||||| || | |||||||||||    
T  9898816 taaataacattcatgtcgcgtttagttatcttaagtagactatacaagtga 9898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 705 - 743
Target Start/End: Original strand, 15466785 - 15466823
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  15466785 tgcacctgctgatcgcacggcgatccttacgtgcggggt 15466823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 435
Target Start/End: Complemental strand, 18075492 - 18075416
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 435  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||| | ||||   |||||||||| |||||||||||||    
T  18075492 attaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagta---tcgtatccacgtggattgtcgttt 18075416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 346 - 403
Target Start/End: Original strand, 19244570 - 19244627
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagta 403  Q
    ||||||||| |||||| |||| ||||| ||| |||||||||||||||| || ||||||    
T  19244570 tgatggtcagattaggcaagtttactagatcgtttaccaagtaataaagtgataagta 19244627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 345 - 738
Target Start/End: Original strand, 32085447 - 32085831
Alignment:
Q  345 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 444  Q
    |||||||||  ||||||||||||||| ||||  |||||||||||||||| || |||||| ||||   || |||||||||||||||||||||| |||||||    
T  32085447 atgatggtcggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgtttcgtctaaac 32085543  T
Q  445 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
    || |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||  |    
T  32085544 agctcgtgttacttattttaagttgacgatataaaataaaagagttaagagttagagattgcaatttttatctgtttgcaacagagcaagttacctg-gt 32085642  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    ||||||||||||||| || || || |||||||| ||| |||| |||||||||   ||||||||||||  ||||||| || ||||||||||||||||||||    
T  32085643 ttggttgcagaaaagtaagcagcggttaggactctttaaatc-cccctattt---attttgttggat-ttaaataacattcatgtcgcgtttagttatct 32085737  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgc 738  Q
    ||| || |  |||||||||||||||| |||| |||||||| ||| ||||| || ||||||||||| || |||||||||||||||||||||||||    
T  32085738 taagtagacaatacaagtgatgagaccgttgtgacgttctgaccaagtcgattttcaagctgcacttgctgatcgcacggtgatccttacgtgc 32085831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 452 - 822
Target Start/End: Original strand, 29027584 - 29027950
Alignment:
Q  452 gttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttg 551  Q
    |||| |||||| |||||| |||||| ||||| ||||| |||| ||||||||||||||||||||| ||||||||| | ||||||| || || ||| |||||    
T  29027584 gttacttattttaagttgccgatattaaataaaagagataagggttagagattgcaatttttatctgtttgcaagagagcaagtgacctgattt-ggttg 29027682  T
Q  552 cagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataa 651  Q
    |||||||| ||||| || |||| ||| | ||||||  ||||||||||   | |||| |||||||||||| || ||||||||||||||||||||||| ||     
T  29027683 cagaaaagaaaacaacggttagaactatgtgaatccaccctatttat---tgtgttagataataaataacattcatgtcgcgtttagttatcttaagtag 29027779  T
Q  652 aatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatacta 751  Q
    | |||| ||||||||     |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||| ||| |||||||    
T  29027780 actataaaagtgatggcgtcgttgggacgttctaacctagtcgggtgtcaagctgcacctgttgatcgcacgatgatcaatacgtgcgaggtctatacta 29027879  T
Q  752 tctcgactgatctaggtctatccctctgatgggtaacttca-ctgctggatcgcatgatgatccttacgtgc 822  Q
    |||||  |||| ||||| |||||||||||||| ||||| || ||||| ||| | | ||||||||||||||||    
T  29027880 tctcggttgatataggtttatccctctgatggctaactgcacctgct-gattgtacgatgatccttacgtgc 29027950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 410 - 756
Target Start/End: Complemental strand, 28606231 - 28605889
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 509  Q
    ||||||||||||  ||||||||||||| ||||||||| | | |||| |||||| |||||||||||||| |||| |||||  ||| |||||||||||||||    
T  28606231 tatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattttaagttgacgatatataataaaagagacaagggttagagattgcaat 28606132  T
Q  510 ttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttgg 609  Q
    |||||||||||| | ||||| |||||||| ||||||| |||||| ||||||||||| |  |||||| | ||| |||| |||| |||||||   |||||||    
T  28606131 ttttatttgtttacgacataacaagttacctgttttttgttgcataaaaggaaacaactgttaggaatctttaaatc-cccccatttata---ttgttgg 28606036  T
Q  610 ataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcac 709  Q
    ||||||||||| ||  ||||| |||||||||||||||| || | ||||||  | |||||   |||| || ||||||| |||| | |||| ||||||| ||    
T  28606035 ataataaataacatttatgtcacgtttagttatcttaagtagactatacagataatgaggtcgttgagatgttctaagctaggcagttgccaagctgaac 28605936  T
Q  710 ctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcg 756  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||||||    
T  28605935 ctgttgatcgcactgtgatccttacatgcagggtatatactatctcg 28605889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 348 - 783
Target Start/End: Complemental strand, 20174747 - 20174323
Alignment:
Q  348 atggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt 447  Q
    ||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   || | |||||||||||||||||||| || ||||| |    
T  20174747 atggtcagattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcatttccacatggattgtcgtttcgtccaaacaat 20174651  T
Q  448 tcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttg 547  Q
    || ||||| |||||| ||||||| ||||||||||| || ||||||| ||||||||||| ||||||||| ||||||||||| ||||| |||| ||  ||||    
T  20174650 tcatgttacttattttaagttgatgatataaaataaaatagttaagggttagagattggaatttttatctgtttgcaacagagcaaattacctg--tttg 20174553  T
Q  548 gttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaa 647  Q
    ||   ||||||| || || || |||| ||| || ||||| || ||||||    |||| ||||| | ||||||| || ||||||||  |||| ||||||||    
T  20174552 gtaaaagaaaagtaagcagcggttagcactcttcgaatc-cctctattt---ttttttttgga-attaaataacattcatgtcgcaattag-tatcttaa 20174459  T
Q  648 ataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtat 747  Q
     || | |||||| |||||||| |  ||||||| || |||||||||||||||||||| || ||||| |||| |||| ||||||||||||||   ||| |||    
T  20174458 gtagactatacatgtgatgaggcccttgggacattttaacctagtcggttgtcaagttgtacctgctgattgcacagtgatccttacgtgtaaggtctat 20174359  T
Q  748 actatctcgactgatctaggtctatccctctgatgg 783  Q
    |||||||||  ||||||||||||||||||| |||||    
T  20174358 actatctcggttgatctaggtctatccctccgatgg 20174323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 495 - 777
Target Start/End: Complemental strand, 25887873 - 25887593
Alignment:
Q  495 gttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcaccccta 593  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||| | |||||||||||||||||| || || || ||| || | ||  |||| ||||||    
T  25887873 gttagagatttgcaatttttatctgtttgcaacagagcaagttacctatttttggttgcagaaaagtaaccagcgattatgattcttcaaatccccccta 25887774  T
Q  594 tttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacg-ttctaacctagt 692  Q
    ||||||   |||||||||| |||||||     |||||||||||| ||||||||  || | ||||||||||||||| ||||||||| | | |||||||| |    
T  25887773 tttata---ttgttggatattaaataattgtaatgtcgcgtttatttatcttaggtagattatacaagtgatgaggctgttgggatgctactaacctaat 25887677  T
Q  693 cggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    | |||||||| ||||||||| ||||  |||||||||||||||||| || || ||||||||||| | ||| |||||||||||||||    
T  25887676 cagttgtcaacctgcacctgctgattacacggtgatccttacgtgtggtgtctatactatctcaattga-ctaggtctatccctc 25887593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 410 - 789
Target Start/End: Complemental strand, 25885513 - 25885140
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 509  Q
    ||||||||||||| | ||||||||||| || ||||| || |||||| |||||| |    |||||||||||||| |||||||||| |||||| ||| ||||    
T  25885513 tatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttattttattccgacgatataaaataaaagagttaagggttagatatttcaat 25885414  T
Q  510 ttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttgg 609  Q
    |||||| |||| | || | || | ||||| || ||  ||||| ||||||| || ||  | |||||||| |||||||  ||||||| |||   |||||||     
T  25885413 ttttatctgttcggaatagagaaggttacctggtt--ggttgtagaaaagtaagcagtggttaggactctttgaattccccctatctat---tttgttga 25885319  T
Q  610 ataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcac 709  Q
    | | ||||||| ||  ||| ||| |||||||||||| | | || ||||||||||||||| | ||||||| |||||||||  || |||||| ||||||||     
T  25885318 a-attaaataacatttatgccgcatttagttatctttagttaactatacaagtgatgaggccgttgggatgttctaacccggttggttgtaaagctgcaa 25885220  T
Q  710 ctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    ||| |||||||||||||||||||||||||  ||| |||||||||||   | ||||| || ||||||||| |||| |||||    
T  25885219 ctgctgatcgcacggtgatccttacgtgcatggtctatactatctcagataatctatgtttatccctctaatggctaact 25885140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 358 - 789
Target Start/End: Complemental strand, 23011864 - 23011443
Alignment:
Q  358 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatt 457  Q
    |||| |||||||| ||||  |||||||||||||||| ||| ||||| | || |   ||||||||| ||||||||||||  |||||||| || | ||||||    
T  23011864 taggcaagtgtaccaaattttttaccaagtaataaagtgt-aagtagattatt---gtatccacaaggattgtcgttttgtctaaacaatttgcgttatt 23011769  T
Q  458 tatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaa 556  Q
    ||||||   | |||||||||| |||| |||||||||| |||||| |||| ||||||||| | ||| ||||||| |||||||| | |||  ||||| ||||    
T  23011768 tatttagtctagacgatataataataaaagagttaagggttagatattgaaatttttatctatttccaacatatcaagttacctattt--ggttgtagaa 23011671  T
Q  557 aaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatat 656  Q
    ||| || || || ||| |||| ||  |||| |||| || |||   |||| |||| | ||||||  || ||||| ||||||| || | |||| || | |||    
T  23011670 aagtaaccagcggttaagactcttcaaatcccccc-atctat---tttgctgga-attaaataccattcatgttgcgtttattttttttaagtagattat 23011576  T
Q  657 acaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcg 756  Q
    |||||||||| | | ||||| || |||||| | |||||  | ||||||| |||||||||||||||||||||| |||| || |||||| ||||||||||||    
T  23011575 acaagtgatggggccgttggaacattctaatcaagtcgaatctcaagctacacctgttgatcgcacggtgattcttatgttcggggtctatactatctcg 23011476  T
Q  757 actgatctaggtctatccctctgatgggtaact 789  Q
      |||||||||| |||| || |||||| |||||    
T  23011475 gttgatctaggtatatcactttgatggctaact 23011443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 363 - 690
Target Start/End: Complemental strand, 17743573 - 17743252
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||| ||||||| || ||||| ||||||||| ||||||    
T  17743573 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttattt 17743477  T
Q  463 ----aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaa 556  Q
        ||  || |||||||||||       |||||| |||||||| ||||||||||||| | ||||||||  |||||||| || |||||||||||| ||||    
T  17743476 ttgcaagtttaacgatataaaa-------gttaagggttagagagttgcaatttttatctttttgcaactaagcaagtttacctgtttttggttgtagaa 17743384  T
Q  557 aaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatat 656  Q
    |||||| |  || |||||| | |||||||| || |  ||||||   |||||||||| ||||||| | | |||| ||||||||||||||||| || | |||    
T  17743383 aaggaagccgcggttaggattatttgaatctcctccgtttata---ttgttggatattaaataacaacaatgttgcgtttagttatcttaagtagactat 17743287  T
Q  657 acaagtgatgagactgttgggacg-ttctaaccta 690  Q
     |||||||| ||  || ||||||| ||||||||||    
T  17743286 gcaagtgataaggttgctgggacgtttctaaccta 17743252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 379 - 743
Target Start/End: Original strand, 25618574 - 25618932
Alignment:
Q  379 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa 478  Q
    ||||||||||||||| || |||||| ||||   || |||||||||||||||||||||| |||||||| |||| || | ||||||  ||||||||||||      
T  25618574 ttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttatttttagttgacgatat-- 25618668  T
Q  479 aatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggac 576  Q
    |||| |||||| || ||||||||| ||||||||||||| ||||||||||| || ||| |||| || ||||||||||||||||| || || || || | |     
T  25618669 aataaaagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctg-ttttggttgcagaaaagtaagcagcggttcgaat 25618767  T
Q  577 tttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgttt-agttatcttaaataaaatatacaagtgatgagactgttg 675  Q
    | || ||||| |||| |||||||   |||||||||| ||||||| |   |||||| |||| | |||||||| | | | ||||||  ||||||| | ||||    
T  25618768 tcttcgaatc-cccccatttata---ttgttggatattaaataacagtaatgtcgtgtttcatttatcttagaaagactatacacatgatgaggccgttg 25618863  T
Q  676 ggacgt-tctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||  |||||||  || ||||||||| |||||||| | ||| |||  ||||||||||||| |||||    
T  25618864 ggacgtgactaaccttatctgttgtcaagttgcacctgctaatcacacaatgatccttacgtgtggggt 25618932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 693 - 822
Target Start/End: Original strand, 29849652 - 29849781
Alignment:
Q  693 cggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaacttca 792  Q
    |||||||||||||| || |||||||||||||||| |||||||||| ||||| ||| ||||||||  ||||||||||||||||||| ||||| ||||| ||    
T  29849652 cggttgtcaagctgtacatgttgatcgcacggtgctccttacgtgtggggtctatgctatctcggttgatctaggtctatccctccgatggctaactaca 29849751  T
Q  793 c-tgctggatcgcatgatgatccttacgtgc 822  Q
    | |||| ||||||| | | ||||||||||||    
T  29849752 cttgct-gatcgcacggtaatccttacgtgc 29849781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 341 - 748
Target Start/End: Original strand, 17349338 - 17349730
Alignment:
Q  341 cataatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatct 440  Q
    ||||||||||  || |||||| || ||||||||||| |||||||||||||||| ||| ||||| ||||   |||||||||||  |||||||||||| ||     
T  17349338 cataatgatgtgcagattaggcaa-tgtactaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaagattgtcgtttcgtcc 17349432  T
Q  441 aaacagttcgtgttatttattt--aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-tta 537  Q
    ||||| |||| |||| ||||||   ||||||||||||||    |||| || ||||       | ||||||||||||| ||||||||||| |||||| |||    
T  17349433 aaacatttcgcgttacttattttgtaagttgacgatata----ataaaagataag-------ggttgcaatttttatctgtttgcaacagagcaagttta 17349521  T
Q  538 cttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgttta 637  Q
    |||||||||||||||| ||||| || || || | || | | || ||||| || |||||||||   |||||||||| ||||||| |  |||||| |  |||    
T  17349522 cttgtttttggttgcaaaaaagtaagcagcggtcagaattcttcgaatcccctctatttata---ttgttggatattaaataacagacatgtcactctta 17349618  T
Q  638 gttatcttaaata-aaatatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacg 735  Q
     ||||||||  ||  | ||||||||||||| | ||||||||||||  |||||||||  |||||  || || |||||| ||||| |||||||||||||||     
T  17349619 tttatcttaggtagtactatacaagtgatggggctgttgggacgtgactaacctagaaggttg-gaaactacacctgctgatcacacggtgatccttaca 17349717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 503 - 741
Target Start/End: Original strand, 17890076 - 17890309
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataatt 602  Q
    ||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||| | || || || ||| || | ||| |||| |||||||| ||        
T  17890076 ttgcaatttttatatgtttgcaacagagcaagttacctgtttt-ggttgcagaaatgtaagcaacgattaagattctttcaatcccccctattcat---- 17890170  T
Q  603 ttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtca 701  Q
    |||||||| | ||||||| || ||| ||| ||||||||||||||| || | ||   |||||||||| |  ||  |||||||||||||| || ||| ||||    
T  17890171 ttgttgga-attaaataacattcatttcgtgtttagttatcttaagtatactacctaagtgatgagtccattccgacgttctaacctaatcagttcgtca 17890269  T
Q  702 agctgcacctgttgatcgcacggtgatccttacgtgcggg 741  Q
    || ||||| ||||||| |||||||||||||||| ||||||    
T  17890270 agttgcacatgttgatagcacggtgatccttacatgcggg 17890309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 356 - 559
Target Start/End: Original strand, 15339233 - 15339433
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| |||||||||||||||||||||| ||  ||||| ||   |||| |||||||||||||||||||||| || ||||| || | ||||    
T  15339233 attaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagag---tatcatatccacatggattgtcgtttcgtccaaacaattagcgtta 15339329  T
Q  456 ttta--tttaaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttg 551  Q
     |||  ||  ||||| | ||||||    |||| || |||| |||||||| ||||||||||||||||||||||||| |||||| |||  ||||||| ||||    
T  15339330 cttactttgtaagttaaggatata----ataaaagataagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttgttg 15339425  T
Q  552 cagaaaag 559  Q
    ||||||||    
T  15339426 cagaaaag 15339433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 356 - 681
Target Start/End: Complemental strand, 29719335 - 29719018
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| || ||||||    | ||||||||||||| ||||||||||||| |  ||||| |||| ||||    
T  29719335 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta---gattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgtta 29719239  T
Q  456 tttatttaaag-ttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgc 552  Q
     ||||||  || |||||| ||||    |||| |  |||| |||||||| ||||||||||||| ||| ||||||| |||||| |||| ||| |||||||||    
T  29719238 cttatttttagtttgacggtata----ataaaatataagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgc 29719143  T
Q  553 agaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaa 652  Q
    ||||||| || || |  |||||| | || ||||| || |||||||    |||||| || | ||||||| |   |||||||||||| ||||||||  || |    
T  29719142 agaaaagtaagcagcagttaggattcttcgaatcccctctattta----tttgttagaaattaaataacagtaatgtcgcgtttatttatcttaggtaga 29719047  T
Q  653 atatacaagtgatgagactgttgggacgt 681  Q
     |||||||||||||||   ||||||||||    
T  29719046 ctatacaagtgatgaggtcgttgggacgt 29719018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 565
Target Start/End: Complemental strand, 11382850 - 11382651
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||  ||||| |||||||  ||||||| || |||||| ||||   || |||||||||| |||||  ||||||| ||| | |||| |||| ||||||    
T  11382850 aagtgtatcaaatcgtttaccagataataaagtgataagtagagta---tcatatccacatgaattgtattttcatccaaataattcgcgttacttattt 11382754  T
Q  463 aaagtt-gacgatataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagg 560  Q
      |||| |||||||  | ||| ||||||||| ||||||||||| |||| |||||| ||||||||||| |||||||||||||||||| |||| |||||||     
T  11382753 ttagtttgacgata--agataaaagagttaaaagttagagatttgcaaattttatctgtttgcaacagagcaagttacttgttttttgttgtagaaaagt 11382656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 346 - 690
Target Start/End: Complemental strand, 27909233 - 27908894
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| ||  || |||||||| ||||| |||||||||||||||| || |||||| ||||   |||||||||||||| || | |||||||| |||||    
T  27909233 tgatggtcagatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatgggttattgtttcatccaaaca 27909137  T
Q  446 gttcgtgttatttattt----aaagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttact 539  Q
     |||  |||| ||||||    ||  ||||||||||||||  |||     ||| ||||||   ||||||||||||| ||||||||||| |||||| ||||     
T  27909136 attcacgttacttatttttgtaagtttgacgatataaaagttaa-----aagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacc 27909042  T
Q  540 tgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagt 639  Q
    || ||||||||||||||||  || || || |||||| | || ||||| ||||||||||||   |||||||||| ||| ||| |   |||| ||||||| |    
T  27909041 tg-ttttggttgcagaaaattaagcagcggttaggattcttcgaatcccccctatttata---ttgttggatattaagtaacaataatgttgcgtttatt 27908946  T
Q  640 tatcttaaataaaatatacaagtgatgagactgttgggacgt-tctaaccta 690  Q
    |||||||  || | ||||||||||||||  | |||||||||| |||||||||    
T  27908945 tatcttaggtagactatacaagtgatgaagccgttgggacgtgtctaaccta 27908894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 346 - 545
Target Start/End: Complemental strand, 45621995 - 45621799
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||| | |||||||| ||||| |||||||||||||||| ||  ||||| ||||   ||||||| ||| ||||||||||||| || |||||    
T  45621995 tgatggtcggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagta---tcgtatctacaaggattgtcgtttcgtccaaaca 45621899  T
Q  446 gttcgtgttatttatttaaagttg-acgatataaaatataaga-gttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgt 542  Q
     ||||||||| ||||||    ||| || | |||||||| |||| | |||| ||||||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  45621898 attcgtgttacttattt---tttgaacaaaataaaataaaagatgataagggttagagtttgtaatttttatctgtttgcaacatagcaagtttacttgt 45621802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 743
Target Start/End: Original strand, 28928928 - 28929018
Alignment:
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||||   ||||||||||| |||||||||| |||  ||||| |||||||| |||||||||||||||||||||||| |||||    
T  28928928 tatacaagtgatgaggtcgttgggacgtttctaacctagttggtcatcaagttgcacctgctgatcgcacggtgatccttacgtgtggggt 28929018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 26603320 - 26603120
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataatt 602  Q
    ||||||||||||| ||||||||||| ||||  |||| |||||||||||| ||||||| || || || |||||| | || ||||| ||||||||||||       
T  26603320 ttgcaatttttatctgtttgcaacagagcagtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaatc-cccctatttata--- 26603225  T
Q  603 ttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacg-ttctaacctagtcggttgtca 701  Q
    |||||||||| ||||||| |   |||| |||  || || ||||| ||| | || |||||||||||  ||||||||||| |||||||||||| ||| ||||    
T  26603224 ttgttggatattaaataacagtaatgttgcg--tatttgtcttagatagattaaacaagtgatgaagctgttgggacgtttctaacctagttggtcgtca 26603127  T
Q  702 agctgca 708  Q
    || ||||    
T  26603126 agttgca 26603120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 697 - 757
Target Start/End: Original strand, 11390607 - 11390667
Alignment:
Q  697 tgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcga 757  Q
    |||||||||||||||| | ||||||||||||||||||||||||| || |||||||||||||    
T  11390607 tgtcaagctgcacctgctaatcgcacggtgatccttacgtgcggtgtctatactatctcga 11390667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 697 - 757
Target Start/End: Original strand, 11407268 - 11407328
Alignment:
Q  697 tgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcga 757  Q
    |||||||||||||||| | ||||||||||||||||||||||||| || |||||||||||||    
T  11407268 tgtcaagctgcacctgctaatcgcacggtgatccttacgtgcggtgtctatactatctcga 11407328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 356 - 678
Target Start/End: Complemental strand, 31805004 - 31804695
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||  |||||||| ||||||| || |||||| |||| |   |||||||||  ||||| |||||| || || || |  ||||||    
T  31805004 attaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtatt---gtatccacagagattgccgtttcgtccaaccaatctgtgtta 31804908  T
Q  456 tttattta---aagttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggtt 550  Q
     ||||||    |||||||||||||||    ||| || |||| |||||||| ||||||||||||||||||||||| | ||| || |||| |||||||||||    
T  31804907 cttatttttgtaagttgacgatataa----taaaagataagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggtt 31804812  T
Q  551 gcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaata 650  Q
    ||||||||| || || ||         ||| |||||  |||||||||||   |||||||||| ||||||| |  ||||||||||||| ||||||||  ||    
T  31804811 gcagaaaagtaagcagcg--------gtttggaatccaccctatttata---ttgttggatattaaataacaatcatgtcgcgtttatttatcttaggta 31804723  T
Q  651 aaatatacaagtgatgagactgttggga 678  Q
     | ||||||||||||||| | |||||||    
T  31804722 gactatacaagtgatgaggccgttggga 31804695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 363 - 559
Target Start/End: Original strand, 28925524 - 28925716
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||||||||| || ||||||||||||| || |||||| ||   |   |||||||| |||||||||||||| || ||||| ||| ||||||||||||    
T  28925524 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagcgtt---gtatccacgtggattgtcgtttcgtccaaacaattcatgttatttattt 28925619  T
Q  463 ----aaagttgacgatataaaatataagagttaagagttagaga--ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcaga 555  Q
        ||  |||||||||||||| ||||      || |||||| |  |||||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  28925620 ttgtaagtttgacgatataaaagataa------agggttagaaagcttgcaatttttatttgtttgcaacatagcaagtttacctg-ttttggttgcaga 28925712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 503 - 682
Target Start/End: Original strand, 30411805 - 30411981
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataat 601  Q
    ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||| || || || |||||| |||| ||||| ||||| || |||      
T  30411805 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc-cccctgttcata-- 30411901  T
Q  602 tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt 682  Q
     ||||||||||  || ||| |   ||||||| |||| ||||||||  || | ||||||||||||| ||  |||||||||||    
T  30411902 -ttgttggatatcaagtaacaataatgtcgcatttatttatcttaggtagactatacaagtgatgggatcgttgggacgtt 30411981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 535 - 678
Target Start/End: Original strand, 26667465 - 26667607
Alignment:
Q  535 ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataatt-ttgttggataataaataaaatccatgtcgcg 633  Q
    |||| |||||| ||||||||||||| ||||| || |||||| | || |||||  |||| | |||| |  |||||||||||||||||| ||  ||||||||    
T  26667465 ttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaatc--ccctctgtatattcgttgttggataataaataatataaatgtcgcg 26667562  T
Q  634 tttagttatcttaaataaaatatacaagtgatgagactgttggga 678  Q
    |||| |||||||| ||| | ||||||||||||||| || ||||||    
T  26667563 tttatttatcttagatagattatacaagtgatgaggctcttggga 26667607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 356 - 471
Target Start/End: Complemental strand, 25888324 - 25888216
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||||| ||||   |||||||||||||||||||||||||    ||||| |||| ||||    
T  25888324 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagta---tcgtatccacatggattgtcgtttc----aaacaattcgcgtta 25888232  T
Q  456 tttatttaaagttgac 471  Q
     |||||| ||||||||    
T  25888231 cttattttaagttgac 25888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 45553268 - 45553320
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaa 556  Q
    ||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaagttacctg-ttttggttgcagaa 45553320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 462
Target Start/End: Complemental strand, 12953398 - 12953295
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| |||||||||| ||||||||||| |  |||||| |||| |   || |||||||||||||||||||| || ||||| |||| ||||    
T  12953398 attaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtatt---gtgtccacatggattgtcgtttcgtcaaaacaattcgcgtta 12953302  T
Q  456 tttattt 462  Q
     ||||||    
T  12953301 cttattt 12953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 668
Target Start/End: Complemental strand, 17675589 - 17675427
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataat 601  Q
    ||||||||||||| ||||||||||| |||||| |||| || ||||||||||||||||  ||||| || |||| | |||| ||||  ||||| ||||||      
T  17675589 ttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagaaaaataaacagcggttagaatttttcgaattccccctgtttata-- 17675493  T
Q  602 tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgag 668  Q
     |||||||||| ||| ||| | | |||||||  ||| ||||||||  || | |||||||||||||||    
T  17675492 -ttgttggatattaagtaacaacaatgtcgcaattatttatcttaggtagactatacaagtgatgag 17675427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 559
Target Start/End: Original strand, 13776384 - 13776533
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gca 507  Q
    |||||||||||||| ||||||| |||| || |||||   |  |||| |||||| ||||||||||||  ||||| ||||| |||| |||| |||||| |||    
T  13776384 tatcgtatccacatagattgtcatttcgtccaaacaacccacgttacttattttaagttgacgata--aaata-aagagataagggttaagagatttgca 13776480  T
Q  508 atttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    |||||||| ||||||||||| || ||| |||| ||||||| ||| ||||||||    
T  13776481 atttttatctgtttgcaacagagtaagattacctgttttttgttccagaaaag 13776533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 595
Target Start/End: Complemental strand, 23933506 - 23933415
Alignment:
Q  502 attgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatt 595  Q
    |||||||||||||| ||||||||||| |||||||||||||  ||||||| || ||||| || || || |||||| | |||||||| ||||||||    
T  23933506 attgcaatttttatctgtttgcaacagagcaagttacttg-gtttggtttcacaaaagtaagcagcggttaggattctttgaatc-cccctatt 23933415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 603 - 750
Target Start/End: Complemental strand, 9762312 - 9762164
Alignment:
Q  603 ttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtca 701  Q
    |||||||||| ||||||| |  ||||||||||| | |||| |||  || | | || |||| |||||  |||||||||||| |||||||| | ||| ||||    
T  9762312 ttgttggatattaaataatagtcatgtcgcgttcatttatattaggtatactttataagtaatgaggttgttgggacgttactaacctaattggtcgtca 9762213  T
Q  702 agctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatact 750  Q
    || || ||||  ||||| ||||||||||||||||||  |||| ||||||    
T  9762212 agttgtacctactgatcacacggtgatccttacgtgttgggtctatact 9762164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 29883226 - 29883328
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta--ctatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttat 460  Q
    |||||||||||||  ||||||||||||||||||| |||||||| ||   |||| |||||||| | |||||||||||| ||| ||| |||  |||| ||||    
T  29883226 aagtgtactaaattgtttaccaagtaataaaatg-taagtaaaatattgtatcatatccacaagaattgtcgtttcaactagacaattcacgttacttat 29883324  T
Q  461 ttaa 464  Q
    ||||    
T  29883325 ttaa 29883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 679
Target Start/End: Complemental strand, 17635735 - 17635562
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataat 601  Q
    ||||||||||||| ||||||||||| |||||| |||| || ||||||||||||| ||  ||||| |  |||| | |||| ||||  ||||| ||||||      
T  17635735 ttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagataaataaacagcagttagaatttttcgaattccccctgtttata-- 17635639  T
Q  602 tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggac 679  Q
     |||||||||| ||| ||| | | |||||||  ||| ||||||||  || | ||||||||||||||| | ||||||||    
T  17635638 -ttgttggatattaagtaacaacaatgtcgcaattatttatcttaggtagactatacaagtgatgaggccgttgggac 17635562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 23933332 - 23933293
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  23933332 ctgcacctgctgatcgcacgatgatccttacgtgcggggt 23933293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 12953290 - 12953248
Alignment:
Q  518 gtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 559  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  12953290 gtttgcaacatagcaagtttacatgtttttggttgcagaaaag 12953248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 346 - 462
Target Start/End: Original strand, 45553115 - 45553228
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||| | |||||| |||||||| ||||| |||| ||||||||||| || |||||||   | ||||||||  ||| ||||||||||||  || || ||    
T  45553115 tgatggttagattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaa---aatatcgtatttacagggattgtcgttttgtccaagca 45553211  T
Q  446 gttcgtgttatttattt 462  Q
     ||||||||| ||||||    
T  45553212 attcgtgttaattattt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 742
Target Start/End: Original strand, 13776647 - 13776708
Alignment:
Q  681 ttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    ||||||||||||  || |||||| ||||||||||||| ||||   |||||||||||||||||    
T  13776647 ttctaacctagttagtcgtcaagttgcacctgttgattgcacaacgatccttacgtgcgggg 13776708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 25920391 - 25920448
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||| ||| |  |||| ||||||||||||||||||||    
T  25920391 ttgcaatttttatctgtttgcaacagagcgattttacctgtttttggttgcagaaaag 25920448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 4e-90; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 457 - 822
Target Start/End: Complemental strand, 18101019 - 18100659
Alignment:
Q  457 ttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaa 556  Q
    |||||| || |||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  18101019 ttattttaatttgacgatataaaatagaagagttaagggttagaaattgcaatttttatctgtttgcaacatagcaagttacatgtttt-ggttgcagaa 18100921  T
Q  557 aaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatat 656  Q
    ||| || || || ||| || | |||||||| ||| |||||||   ||||||||||| ||||||| |  |||||| |||||||||||||||| || | |||    
T  18100920 aagtaagcagcggttatgattatttgaatc-cccgtatttat---tttgttggatattaaataacagtcatgtcacgtttagttatcttaagtagactat 18100825  T
Q  657 acaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcg 756  Q
    |||||||||||| | ||||||||||||||||||| | |||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  18100824 acaagtgatgaggccgttgggacgttctaacctacttggttgtcaagttgcacctgctgatcacacggtgatccttacgtgcggggtctatactatctcg 18100725  T
Q  757 actgatctaggtctatccctctgatgggtaacttcac-tgctggatcgcatgatgatccttacgtgc 822  Q
    | |||||||||| ||| |||||||||| ||||| ||| |||||| |||||  |||||||||||||||    
T  18100724 attgatctaggtttattcctctgatggataactgcacatgctgg-tcgcacaatgatccttacgtgc 18100659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 365 - 843
Target Start/End: Original strand, 33190681 - 33191151
Alignment:
Q  365 gtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaa 464  Q
    |||||| ||||| |||| |||||||||||||| |||||| ||||  ||   |||||||   ||||||||||||||||||||  |||||||| |||||| |    
T  33190681 gtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataat---atccacaacaattgtcgtttcatctaaacaactcgtgttacttatttta 33190777  T
Q  465 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaac 564  Q
    |||||||||||||||||| || |||||||  |||||||||| |||||||||||||||||||||  ||||||||| || ||| | ||||||||||| || |    
T  33190778 agttgacgatataaaataaaatagttaaggtttagagattgtaatttttatttgtttgcaacagtgcaagttacctggttt-gattgcagaaaagtaagc 33190876  T
Q  565 atcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtga 664  Q
    | || |||||| | |||| ||| || ||||||||   ||||||  ||  | ||||| || |||||||| |||||||||||||| ||   |||||||||||    
T  33190877 agcggttaggattctttggatc-cctctatttat---tttgtttaatt-tcaataacattcatgtcgcatttagttatcttaagtaggttatacaagtga 33190971  T
Q  665 tgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatct 764  Q
    ||||   ||| ||||||| ||||||||||| ||||||||||||||||| | ||||||| ||||||||||||||| |||| ||||||||||||  ||||||    
T  33190972 tgagttcgttaggacgttttaacctagtcgattgtcaagctgcacctgctaatcgcacagtgatccttacgtgcagggtctatactatctcggttgatct 33191071  T
Q  765 aggtctatccctctgatgggtaacttcactgctggatcgcatgatgatccttacgtgcaggg-ctttgtaattcaaaagt 843  Q
    |||| |||||||||||||| ||||  |||   | ||||||||| |||||||||||||||||| |||  ||||||||||||    
T  33191072 aggtttatccctctgatggctaacaacacctgttgatcgcatggtgatccttacgtgcagggtcttgctaattcaaaagt 33191151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 345 - 789
Target Start/End: Original strand, 24281261 - 24281694
Alignment:
Q  345 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 444  Q
    |||||||||  |||||| || ||||| ||||| |||||||||||||||| || |||||| | ||   || |||||||||||||| ||||||  ||  |||    
T  24281261 atgatggtccaattaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagatta---tcatatccacatggattatcgttttttccgaac 24281357  T
Q  445 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
    | || | |||| |||||| |||||||| |||||||||| |||||| ||| ||||||||||||||||| ||| |||||| |||| || ||||||| |||||    
T  24281358 aatttgcgttacttattttaagttgacaatataaaataaaagagtaaagggttagagattgcaatttctatctgtttgaaacagagaaagttacatgttt 24281457  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
      ||||| ||||||| |  || |  |||||||  |||||| |  ||||||||||   ||||||||| | ||||||| || |||||| |||||||||||||    
T  24281458 --ggttgtagaaaagtatgcagcagttaggacactttgaacc--ccctatttat---tttgttgga-attaaataacattcatgtcccgtttagttatct 24281549  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtg 744  Q
    ||| || | ||| ||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| || |||||| ||||||||||| ||||||||     
T  24281550 taagtagactatgcaagtgatgaggctgttgggacgttctaacctagtcgggtgtcaagctccacctgctggtcgcacagtgatccttacatgcggggtc 24281649  T
Q  745 tatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    ||||||||||||   ||||||||||||||||| |||||| |||||    
T  24281650 tatactatctcggtagatctaggtctatccctttgatggctaact 24281694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 447 - 755
Target Start/End: Original strand, 28008188 - 28008491
Alignment:
Q  447 ttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttttt 546  Q
    ||||||||| |||||| ||||||||||||||||||| |||||| |||  |||||||||||||||||||| ||||| ||| | ||||| |||||||||||     
T  28008188 ttcgtgttacttattttaagttgacgatataaaataaaagagtaaaggattagagattgcaatttttatctgtttccaatagagcaaattacttgtttt- 28008286  T
Q  547 ggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctta 646  Q
    ||||||||||||| || || || |||||| | |||||||| |||||||||||    |||||| ||| ||||||| |  ||||||||||||| ||||||||    
T  28008287 ggttgcagaaaagtaagcagcggttaggattctttgaatctcccctatttat----ttgttgtatattaaataacagtcatgtcgcgtttatttatctta 28008382  T
Q  647 aataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgta 746  Q
    | || | |||||||||| ||||  |||||||||||| |||| || ||||||||||||||||||||| ||||||||| |||||||||||||| ||||| ||    
T  28008383 agtagattatacaagtggtgaggttgttgggacgttataacttaatcggttgtcaagctgcacctgctgatcgcacagtgatccttacgtgtggggtcta 28008482  T
Q  747 tactatctc 755  Q
    |||||||||    
T  28008483 tactatctc 28008491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 356 - 734
Target Start/End: Complemental strand, 9787983 - 9787612
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| |||||||||| ||||||||||| || |||||| ||||   ||||||||| ||  ||||||||||| ||||||||  ||   |||    
T  9787983 attaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagta---tcgtatccatataaattgtcgtttcgtctaaacaactccaatta 9787887  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 555  Q
     |||||| ||||| | ||||||||||| |||||  ||| |||||||||||||||||| |  ||||||||||| ||||||| || ||||||||||||||||    
T  9787886 cttattttaagtttatgatataaaatagaagagaaaagggttagagattgcaattttgaactgtttgcaacagagcaagtgacctgtttttggttgcaga 9787787  T
Q  556 aaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaata 655  Q
    |||| ||    || |||| ||| |||||||| ||| ||| ||||   ||||||||||| |||||| || ||||| | |||||  || ||||| || | ||    
T  9787786 aaagtaagttgcggttagaactctttgaatc-cccatatatata---ttgttggataaaaaataacattcatgttgtgtttaagtaccttaagtagacta 9787691  T
Q  656 tacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttac 734  Q
    |||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9787690 tacaagtgataaggccgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtaatccttac 9787612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 479 - 777
Target Start/End: Complemental strand, 12012797 - 12012505
Alignment:
Q  479 aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactt 578  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||| ||||| || |||||| |     
T  12012797 aataaaagagttaagggttagagattgcaatttttatttgtttgcaacatagcgagttacctgtttt-ggttgcacaaaagtaaacaacgattaggattc 12012699  T
Q  579 tttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggga 678  Q
    || ||||| |||||||||||    |||||||||| ||||||| || |||||| |||||| ||||||||| || | ||||||||||||||| | |||||||    
T  12012698 ttcgaatc-cccctatttat----ttgttggatattaaataacattcatgtcacgtttatttatcttaagtagactatacaagtgatgaggccgttggga 12012604  T
Q  679 cgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    ||| |||||||| || |||||||||  ||| ||| |||||||||| ||||||||||||| ||||| |||| |||||||   ||  ||||||||||||||    
T  12012603 cgtgctaacctaatcagttgtcaagtcgcatctgctgatcgcacgatgatccttacgtgaggggtctatattatctcggtcgacttaggtctatccctc 12012505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 467 - 777
Target Start/End: Complemental strand, 15808016 - 15807711
Alignment:
Q  467 ttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacat 566  Q
    |||| ||||||||||| |||||||||  ||||  ||||||||||||||||||||||||||| ||||||||||  ||||| ||||| ||||||  || ||     
T  15808016 ttgaagatataaaataaaagagttaatggttaaggattgcaatttttatttgtttgcaacagagcaagttaccagtttt-ggttgtagaaaaataagcag 15807918  T
Q  567 cgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatg 666  Q
    || |||||| | |||||||| || ||||||||    | |||||||| ||||||| || ||||||| ||||||||||||||| || | |||||||||||||    
T  15807917 cgattaggattctttgaatccccactatttat----tcgttggatattaaataatattcatgtcgtgtttagttatcttaagtagactatacaagtgatg 15807822  T
Q  667 agactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctag 766  Q
    ||   ||||||||||||||||||| | |||||||||| |||||||| ||||| ||||||||||||||| |||||||| |||| |||||||  |||| | |    
T  15807821 aggtcgttgggacgttctaacctaattggttgtcaagttgcacctgctgatcacacggtgatccttacatgcggggtctataatatctcggttgattttg 15807722  T
Q  767 gtctatccctc 777  Q
    || ||||||||    
T  15807721 gtttatccctc 15807711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 378 - 783
Target Start/End: Original strand, 24214561 - 24214947
Alignment:
Q  378 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatata 477  Q
    |||||||||||||||| || |||||| ||||||   ||||||||||||||||| ||||| ||||||||  |   |||| |||||| |||| |||||||||    
T  24214561 tttaccaagtaataaagtgataagtacagtact---gtatccacatggattgttgtttcgtctaaacaacttacgttacttattttaagtggacgatata 24214657  T
Q  478 aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggact 577  Q
    ||||| |||| ||||| ||| || |||| ||||||||| |||| |        |||||||| || ||| ||||||||||||  ||  | || ||||||||    
T  24214658 aaataaaagaattaagggtttgaaattggaatttttatctgttaggc------caagttacctggttt-ggttgcagaaaaataagtagcggttaggact 24214750  T
Q  578 ttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggg 677  Q
     |||||||| |||||||||||   ||||||||||| ||||||| |     |||||||||||||||||||| || | |||  ||||||||||   | || |    
T  24214751 ctttgaatc-cccctatttat---tttgttggatattaaataaca-----gtcgcgtttagttatcttaagtagactattgaagtgatgaggtcgatgag 24214841  T
Q  678 acgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||| ||||| |||||||||| |  |||||||||||||||||||    
T  24214842 acgttctaacctagtcggttgtcaagctgcacctgctgattgcacggtgggccttacgtgtggggtctatactatcttggttgatctaggtctatccctc 24214941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 364 - 822
Target Start/End: Original strand, 16179010 - 16179458
Alignment:
Q  364 agtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattta 463  Q
    ||||||| ||||| |||| ||||||||||| || |||||| ||||   ||||||||| | |||  |||||||| || ||||| ||| ||||| ||||||     
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagta---tcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttt 16179106  T
Q  464 ---aagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 559  Q
       ||||||||||||||||||||||| ||||   ||      ||||||||||||| || |||||||| |||||||| || | ||||||||||||||||||    
T  16179107 tgtaagttgacgatataaaatataagggttagatgtc-----ttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaag 16179201  T
Q  560 gaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatataca 659  Q
     || || || ||||||   || |||||  |||| ||||||   |||||||||| ||| ||| |   ||||||| |||| ||||||||  || | |||| |    
T  16179202 taagcagcggttagga---ttcgaatccaccctgtttata---ttgttggatattaagtaacagtaatgtcgcatttatttatcttaggtacactatata 16179295  T
Q  660 agtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgact 759  Q
    |||||| ||     || ||  ||||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||| ||||||||||||| |    
T  16179296 agtgataaggtcaatgtgatattctaacctagtcggttgtcaagctgcacctgcagatcacacggtgatccttatgtgcggggtatatactatctcgatt 16179395  T
Q  760 gatctaggtctatccctctgatgggtaacttca-ctgctggatcgcatgatgatccttacgtgc 822  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||||| || |||||||||||||    
T  16179396 gatctaggtctatccctctgatggctaactgcatctgct-gatcgcacgacgatccttacgtgc 16179458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 506 - 775
Target Start/End: Original strand, 21449218 - 21449485
Alignment:
Q  506 caatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataatttt 604  Q
    |||||||||| |||||||||||||||||||| |  ||||||||| |||||||||| || || || |||||| | || ||||| | ||| ||||||   ||    
T  21449218 caatttttatctgtttgcaacatagcaagtttaactgtttttggatgcagaaaagtaagcagcggttaggattcttcgaatccctcctgtttata---tt 21449314  T
Q  605 gttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagc 704  Q
    |||||||| ||| ||| ||  ||||| |||||| ||||||||  || | ||||||| |||| || | |||||||||||||||||||||||||||||||||    
T  21449315 gttggatattaagtaacatatatgtcacgtttatttatcttaggtagactatacaaatgataaggcggttgggacgttctaacctagtcggttgtcaagc 21449414  T
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccc 775  Q
    | |||||| || ||||| ||||||||||||||||||||| ||||||||||||  ||||||| || ||||||    
T  21449415 ttcacctgctggtcgcatggtgatccttacgtgcggggtctatactatctcggttgatctatgtttatccc 21449485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 356 - 684
Target Start/End: Original strand, 22664201 - 22664523
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| || ||||| ||||| |||||||||||||||| || |||||| ||||   || |||||||  ||||| || |||| ||||||||  ||| |||     
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcttatccactgggattttcatttcgtctaaacaactcgcgttg 22664297  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 554  Q
     |||||| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| |||| |||||||||| |||||| ||||||||    
T  22664298 cttattttaagttgacgatataaaataaaagagataagggttagtaaattgcaatttttatttgtttgtaacagagcaagttacatgtttt-ggttgcag 22664396  T
Q  555 aaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaat 654  Q
    ||||| ||  | || |||||||| ||||||||  || |||||||   ||| ||||||| ||||||| ||  |||||  ||||||||||||||  || | |    
T  22664397 aaaagtaagtagcggttaggactctttgaatcctccgtatttat---tttattggatattaaataacatttatgtcatgtttagttatcttaggtagact 22664493  T
Q  655 atacaagtgatgagactgttgggacgttct 684  Q
    |||||||| ||||||| |||||||||||||    
T  22664494 atacaagtaatgagaccgttgggacgttct 22664523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 626 - 822
Target Start/End: Complemental strand, 25404338 - 25404142
Alignment:
Q  626 atgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggt 725  Q
    |||| ||||||| |||||||| ||| | |||||||||||| || | ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||    
T  25404338 atgtggcgtttatttatcttagatagactatacaagtgataaggccgttgggacgttttaacctagttggttgtcaagctgcacctgttgatcgcacagt 25404239  T
Q  726 gatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaacttcactgctggatcgcatgatgatccttacgtgc 822  Q
    |||||||||||||||||| ||||  |||| |  ||||||| ||||||||||||||||| ||||| |||   | ||||||| | |||||| |||||||    
T  25404238 gatccttacgtgcggggtctatatgatcttggttgatctaagtctatccctctgatggctaactgcacatgttgatcgcacggtgatccctacgtgc 25404142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 363 - 755
Target Start/End: Complemental strand, 13345433 - 13345048
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||  |||||||||||||||| || |||||| ||||   || |||||||||||||||||||||  || ||||| |||| |||| ||||||    
T  13345433 aagtgtaccaaattgtttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 13345337  T
Q  463 aaagtt-gacgatataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagg 560  Q
    | |||| |||||||  ||||| |||||||||  |||| ||||| ||| ||||||| | |||  ||||||||| ||||| |||||| ||||  |||||||     
T  13345336 atagtttgacgata--aaataaaagagttaaaggttaaagatttgcagtttttatctatttaaaacatagca-gttacctgtttt-ggtttaagaaaagt 13345241  T
Q  561 aaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaa 660  Q
    ||||| || |||||| |||| ||||| ||||||||||||   |||||||||| ||||||| |    ||||||||||| ||||||||  ||   |||||||    
T  13345240 aaacagcggttaggatttttcgaatcccccctatttata---ttgttggatattaaataacaatattgtcgcgtttatttatcttaggtagtctatacaa 13345144  T
Q  661 gtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    ||||||||  ||||| |||||| |||||| | ||| | |||||||||||| |||||||| || ||| ||||||||||| ||||| ||||| |||||    
T  13345143 gtgatgaggttgttgtgacgttactaacccaatcgatcgtcaagctgcacatgttgatcacatggtaatccttacgtgtggggtctataccatctc 13345048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 625 - 768
Target Start/End: Original strand, 14779805 - 14779948
Alignment:
Q  625 catgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacgg 724  Q
    ||||||||||||| |||||| |  || | |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14779805 catgtcgcgtttatttatctcaggtagactatacaagtgataaggccgttgggacgttctaacctagtcggttgtcaagctgcacctgctgatcgcacgg 14779904  T
Q  725 tgatccttacgtgcggggtgtatactatctcgactgatctaggt 768  Q
    ||||||||| ||  ||||| ||||||||||||  ||||||||||    
T  14779905 tgatccttatgtatggggtctatactatctcggttgatctaggt 14779948  T

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Target: chr1; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 356 - 743
Target Start/End: Original strand, 17359157 - 17359537
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||  ||||   || |||||| |  |||||||||||| || ||| | |||  ||||    
T  17359157 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagta---tcatatccataaagattgtcgtttcgtccaaataattctcgtta 17359253  T
Q  456 tttatttaaag-ttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgc 552  Q
     ||||||  || ||||||||||||    ||| || |||| |||||||| ||||||||||||| || | |||||||||||| || || |||||||||||||    
T  17359254 cttatttttaggttgacgatataa----taaaagataagggttagagagttgcaatttttatctgctggcaacatagcaaatttacctgtttttggttgc 17359349  T
Q  553 agaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaa 652  Q
    | ||||| ||    || |||||| | || ||||| || |||||||||   |||||||||| ||||||| |  ||||||||||||| ||||||||  || |    
T  17359350 ataaaagtaagatgcggttaggattcttcgaatcccctctatttata---ttgttggatattaaataacaatcatgtcgcgtttatttatcttaggtaga 17359446  T
Q  653 atatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
     ||||||||||||||| ||||||||||||  |||||||| |  ||||  || |||||| |||||||| |||||||||||||||||| |||||    
T  17359447 ctatacaagtgatgaggctgttgggacgtgactaacctaataagttg-gaaactgcacatgttgatcacacggtgatccttacgtgtggggt 17359537  T

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Target: chr1; HSP #16
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 600 - 743
Target Start/End: Original strand, 16112053 - 16112195
Alignment:
Q  600 attttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgt 699  Q
    ||||||||||||  ||||||| |  ||||| | ||||||||||||||| || | |||||||||||||||  ||||||||| ||||||| ||||| |||||    
T  16112053 attttgttggatt-taaataacagtcatgtagagtttagttatcttaagtagactatacaagtgatgaggatgttgggacattctaacgtagtcagttgt 16112151  T
Q  700 caagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||| | |||||||||||||||||| ||||||||||||||||||    
T  16112152 caagttacacctgttgatcgcacggagatccttacgtgcggggt 16112195  T

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Target: chr1; HSP #17
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 544 - 789
Target Start/End: Complemental strand, 25961085 - 25960846
Alignment:
Q  544 tttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatc 643  Q
    |||||||||||||||| ||  | || |||||||| |||||||| |||||||||||   ||||||||| | ||||||| || ||||||| |||| ||||||    
T  25961085 tttggttgcagaaaagtaagaagcggttaggactctttgaatc-cccctatttat---tttgttgga-attaaataacattcatgtcgtgtttcgttatc 25960991  T
Q  644 ttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||| || | |||||||||| |||| | |||||||| |||||| |||||| ||||||||| | ||||| |||||| || || |||||||||||| |||||    
T  25960990 ttaagtagactatacaagtgttgaggccgttgggac-ttctaatctagtcagttgtcaagttacacctattgatcacatggcgatccttacgtgtggggt 25960892  T
Q  744 gtatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
     |||| ||||||   ||||||| || ||||| |||||||| |||||    
T  25960891 ctatattatctcagttgatctatgtatatccttctgatggctaact 25960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 410 - 737
Target Start/End: Original strand, 9401551 - 9401875
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattta---aagttgacgatataaaatataagagttaagagttagaga-ttg 505  Q
    ||||||||||||||| ||||||||||| || ||||| |||| |||| ||||||    ||||||  |||||||    ||| || |||  |||||||| |||    
T  9401551 tatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgttgatataa----taaaagataacggttagagagttg 9401646  T
Q  506 caatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataatttt 604  Q
    |||||||||| ||||||||||| || ||||| || |||||| |||| || ||||| ||  | || |||||| | || ||||| || |||||||||   ||    
T  9401647 caatttttatctgtttgcaacagagtaagtttacctgtttt-ggttacaaaaaagtaagtagcggttaggattcttcgaatcccctctatttata---tt 9401742  T
Q  605 gttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaag 703  Q
    || ||||| ||||||| |  ||| ||||||||| ||||||||| || | ||||| ||||||||| ||||||||||||  |||||||||  |||||  |||    
T  9401743 gtaggatattaaataacagacatatcgcgtttatttatcttaagtagactatacgagtgatgaggctgttgggacgtgactaacctagaaggttgg-aag 9401841  T
Q  704 ctgcacctgttgatcgcacggtgatccttacgtg 737  Q
    ||||||||||||||| ||||||||||||||||||    
T  9401842 ctgcacctgttgatcacacggtgatccttacgtg 9401875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 490 - 749
Target Start/End: Complemental strand, 31236024 - 31235766
Alignment:
Q  490 taagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatca 587  Q
    |||| |||||||| ||||||||||||| | ||||||||| |||||| ||||||||||||||||||| ||||| || || || ||| || | |||||||      
T  31236024 taagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaagcaacggttaagattctttgaattc 31235925  T
Q  588 cccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaa 686  Q
    || |||||||||   |||||||||| ||||||| |  |||||| | |||| |||||||   || | ||||||||||||||| ||||||||| ||| ||||    
T  31235924 cctctatttata---ttgttggatattaaataacagtcatgtcacatttatttatctttggtagactatacaagtgatgaggctgttgggatgttactaa 31235828  T
Q  687 cctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatac 749  Q
    |||| | |||||  |||||||||| ||||||| ||||||||| |||||||  ||||| |||||    
T  31235827 cctaataggttg-gaagctgcacccgttgatcacacggtgattcttacgtttggggtctatac 31235766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 356 - 557
Target Start/End: Complemental strand, 23038115 - 23037918
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| || ||||| |     ||||||||||||||||||||||||||| || |||||  ||  ||||    
T  23038115 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtgag----tatcgtatccacatggattgtcgtttcgtcaaaacaactctcgtta 23038020  T
Q  456 tttatttaaagttgacgat-ataaaatataagagttaagagtt-agagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     |||||| |||||   ||| |||||||| ||||| |||  ||| ||| ||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  23038019 cttattttaagttt--gatgataaaataaaagagataatggttgagaaattacaatttttttctgtttgcaacatagcaagttacttgtttttggttgca 23037922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 363 - 557
Target Start/End: Complemental strand, 25405727 - 25405536
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| || || |||||||||||||||| || |||||||||||   ||||||||||| ||||||||||||| || |||||||||  |||| ||||||    
T  25405727 aagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagta---tcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T
Q  463 ---aaagttgacgatataaaa-tataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaa 557  Q
        ||||||||||||||||| | |||| ||||      | || ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  25405630 ttgtaagttgacgatataaaagtttaagggtta-----gaaagcttgcaatttttatttgtttgcaacagagcaagtttacttgtttttggttgcagaaa 25405536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 363 - 712
Target Start/End: Complemental strand, 17610353 - 17610009
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| |  |||||| ||||   ||||||||||||||||||||||||| || ||||| |||  |||| ||||||    
T  17610353 aagtgtaccaaatcgtttaccaagtaataaagttataagtagagta---tcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttattt 17610257  T
Q  463 ----aaagttgacgatataaaatataagagttaagagttagaga--ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcaga 555  Q
        ||  ||||||||||||||       |||||  |||||| |  ||| ||||||||| ||||||||||| |||||||| || ||||||||||||||||    
T  17610256 ttgtaagtttgacgatataaaa-------gttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttggttgcaga 17610164  T
Q  556 aaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaata 655  Q
    |||| || || || |||||| | |||||| | ||||| ||||||   ||||| | || ||||||| | | ||||| |||||| ||||||||  || | ||    
T  17610163 aaagtaagcagcggttaggattctttgaaacccccctttttata---ttgttagttattaaataacagcaatgtcccgtttatttatcttaggtagacta 17610067  T
Q  656 tacaagtgatgagactgttgggacg-ttctaacctagtcggttgtcaagctgcacctg 712  Q
    ||||||||||| |   ||||||| | |||||||||||||| | |||||| ||||||||    
T  17610066 tacaagtgatgcggtcgttgggatgtttctaacctagtcgttcgtcaagttgcacctg 17610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 363 - 668
Target Start/End: Complemental strand, 15544063 - 15543765
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||    ||||||||||| || ||||| ||||||||| ||||||    
T  15544063 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattt 15543967  T
Q  463 a---aagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaa 558  Q
        || |||||||||||||| ||||| ||||| ||    || |||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||    
T  15543966 ttttaatttgacgatataaaagataagggttaaaag----ag-ttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaa 15543872  T
Q  559 ggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatac 658  Q
    | || || || |||||| | || ||||| ||| | ||||||    |||||||||  || ||| |  |||||||| |||| ||||||||  || | |||||    
T  15543871 gtaagcaacggttaggattcttcgaatcccccttgtttata---ctgttggatatcaagtaacaatcatgtcgcctttatttatcttaggtagattatac 15543775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 498 - 709
Target Start/End: Complemental strand, 17121465 - 17121260
Alignment:
Q  498 agagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctattta 597  Q
    |||||||||| |||| |||||||||||| | ||||||||||||| ||||||||||||||||| || || || |||||| | || |||||   ||||||||    
T  17121465 agagattgcatttttcatttgtttgcaatagagcaagttacttg-ttttggttgcagaaaagtaagcagcggttaggattcttcgaatc-ttcctattta 17121368  T
Q  598 taattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt 697  Q
        ||||||||| | ||||||| || ||||||||||||| ||||||||| || | |||  ||||||||||   |||||||| |||||||||||||||||    
T  17121367 ----tttgttgga-attaaataacattcatgtcgcgtttacttatcttaagtagattatctaagtgatgaggtcgttgggacattctaacctagtcggtt 17121273  T
Q  698 -gtcaagctgcac 709  Q
     |||||| |||||    
T  17121272 cgtcaagttgcac 17121260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 345 - 485
Target Start/End: Original strand, 12208585 - 12208725
Alignment:
Q  345 atgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaac 444  Q
    |||||||||| ||  || |||||||||||||| |||||||||||||||| || ||||||    | |||| |||||||||||||||||||||| || ||||    
T  12208585 atgatggtcagatatggcaagtgtactaaatcgtttaccaagtaataaagtgataagta---gaatatcatatccacatggattgtcgtttcgtccaaac 12208681  T
Q  445 agttcgtgttatttattt---aaagttgacgatataaaatataa 485  Q
    | |||| |||| ||||||    ||||||||||||||||| ||||    
T  12208682 aattcgcgttacttatttttgtaagttgacgatataaaagataa 12208725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 496 - 559
Target Start/End: Original strand, 16360003 - 16360065
Alignment:
Q  496 ttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  16360003 ttagagattgcaatttttatttgtttgcaacaaagcaagttacctg-ttttggttgcagaaaag 16360065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 686 - 777
Target Start/End: Complemental strand, 32382790 - 32382699
Alignment:
Q  686 acctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    ||||| || |||||||||||||| ||| |||||||||||||||| ||||||||||||| ||||||||||||  | ||  |||||||||||||    
T  32382790 acctaatcagttgtcaagctgcatctgctgatcgcacggtgatcattacgtgcggggtctatactatctcggttcattaaggtctatccctc 32382699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 536
Target Start/End: Original strand, 147677 - 147801
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 509  Q
    |||| ||| ||||||||||||| |||| ||||||||| ||| |||| |||||| || |||||||||| ||||| ||||| |||| |||||||||| |||     
T  147677 tatcatattcacatggattgtcatttcgtctaaacagctcgcgttacttattttaatttgacgatat-aaataaaagagataagggttagagatttcaa- 147774  T
Q  510 ttttatttgtttgcaacatagcaagtt 536  Q
    |||||| | ||||||||| ||||||||    
T  147775 ttttatctatttgcaacagagcaagtt 147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 505 - 559
Target Start/End: Complemental strand, 21973164 - 21973110
Alignment:
Q  505 gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  21973164 gcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaag 21973110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 346 - 551
Target Start/End: Original strand, 21847619 - 21847820
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| |||||| |||||||| ||||| |||||||||||||||| |  |||||| ||   ||| ||||||||||||||||||||||| || |||||    
T  21847619 tgatggtcatattaggcaagtgtaccaaatcgtttaccaagtaataaagt-ctaagtagag---tattgtatccacatggattgtcgtttcgtccaaaca 21847714  T
Q  446 gttcgtgttatttatttaaagttgacgata-taaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
     |||  |||| |||| |    || || | | ||||||| ||||||| |  | ||||||||||||||||||||||||||||||  ||||  |||||| |||    
T  21847715 attcacgttacttatct-ggtttaacaaaattaaaataaaagagttgaaggatagagattgcaatttttatttgtttgcaacggagcagtttacttattt 21847813  T
Q  545 ttggttg 551  Q
    || ||||    
T  21847814 tttgttg 21847820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 363 - 559
Target Start/End: Original strand, 14779567 - 14779760
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| |||||||||||||||||||||  || ||| || ||||   || |||||||| ||||||||||||| || |||||  ||| |||||||||||    
T  14779567 aagtgtaccaaatcatttaccaagtaataatgtgataattagagta---tcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttattt 14779663  T
Q  463 a---aagttgacgatataaaatataagagttaagagttaga--gattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaa 556  Q
        ||||||||||||||||| | ||     ||  ||||||  | ||||||||||||||||||| ||||||| |||| ||||||| ||||||||| ||||    
T  14779664 ttgtaagttgacgatataaaaaagaa-----aaaggttagaagggttgcaatttttatttgtttacaacatatcaagtttacttg-ttttggttgaagaa 14779757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 346 - 559
Target Start/End: Complemental strand, 15813268 - 15813060
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||| |||| || |||||||| || ||||| |    |||||||||||||| ||||| ||||| | || |||||    
T  15813268 tgatggtcggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagtga----ctatcgtatccacaaggattttcgttgcgtccaaaca 15813173  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtt 543  Q
      ||  |||| |||||| || |||||||||  ||||| ||||| |||| |||| ||| || ||||||||||| ||||| |||||||||||||||| |||     
T  15813172 actctcgttacttattttaatttgacgata--aaata-aagagataagggttaagaggtttgcaatttttatatgtttccaacatagcaagttacctgtc 15813076  T
Q  544 tttggttgcagaaaag 559  Q
    |||| ||||| |||||    
T  15813075 tttgcttgcaaaaaag 15813060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 346 - 439
Target Start/End: Original strand, 16359856 - 16359945
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatc 439  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||||| ||||||   || ||| ||||||||||| | ||||||||||||    
T  16359856 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagta---tagtattgtatccacatgtactgtcgtttcatc 16359945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 356 - 559
Target Start/End: Complemental strand, 51473978 - 51473781
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| || ||||| ||||| ||||||  |||||||| || |||||| ||||   ||||||||| ||||||||||||||  || ||||| || | ||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagta---tcgtatccatatggattgtcgttttgtccaaacaatttgcgtta 51473884  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagag-ttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     || |||  ||| ||| |||  ||||| ||||||||| || ||||||||| ||||||||||| ||||||||||||| ||||||| |   |||||||||||    
T  51473883 cttgtttttagtcgacaata--aaataaaagagttaaaaggttagagatttgcaatttttatctgtttgcaacatatcaagtta-tctattttggttgca 51473787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 614 - 740
Target Start/End: Original strand, 21847825 - 21847950
Alignment:
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctg 712  Q
    ||||||| || ||||||||||||||||||||||| || | ||||||||||||  | | |||   ||||||||||| | ||||||  |||||  |||| ||    
T  21847825 taaataacattcatgtcgcgtttagttatcttaagtagactatacaagtgat--ggccgttcaaacgttctaaccgaatcggttcatcaagtcgcacttg 21847922  T
Q  713 ttgatcgcacggtgatccttacgtgcgg 740  Q
    ||||||||||| ||||| ||||||||||    
T  21847923 ttgatcgcacgatgatctttacgtgcgg 21847950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 468
Target Start/End: Complemental strand, 26649067 - 26648966
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||  ||||| ||||||||||||||||||| ||||| ||    ||| ||||||||||||||| ||||||| || |||||  ||| |||||||||||    
T  26649067 aagtgtatcaaatcgtttaccaagtaataaaatgataagtgaa----tattgtatccacatggattatcgtttcgtccaaacaactcgcgttatttattt 26648972  T
Q  463 aaagtt 468  Q
     |||||    
T  26648971 taagtt 26648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 545
Target Start/End: Complemental strand, 16787712 - 16787645
Alignment:
Q  480 atataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
    ||||||||||| || |||| |||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  16787712 atataagagtttagggttaagagatttgcaatttttatatgtttgcaacatagcaaattacttgtttt 16787645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 509 - 592
Target Start/End: Complemental strand, 21334672 - 21334589
Alignment:
Q  509 tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccct 592  Q
    ||||||| ||||||||| |||||||||||| | |||||||||| ||||||| ||||| || |||||| | || ||||| |||||    
T  21334672 tttttatctgtttgcaaaatagcaagttacctatttttggttgaagaaaagtaaacagcggttaggattcttcgaatcccccct 21334589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 363 - 436
Target Start/End: Original strand, 21449091 - 21449161
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 436  Q
    |||||||| ||||| |||||||||||||||| || |||||| ||   ||||||||||||| |||||||||||||    
T  21449091 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacaaggattgtcgtttc 21449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 492
Target Start/End: Complemental strand, 21666687 - 21666576
Alignment:
Q  381 accaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt---aaagttgacgatata 477  Q
    ||||||||||||| || |||||| ||||   |||||||||||||||||||| |||| || ||||| |||  |||| ||||||    ||||||||||||||    
T  21666687 accaagtaataaagtgataagtagagta---tcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgatata 21666591  T
Q  478 aaatataagagttaa 492  Q
    ||| ||||| |||||    
T  21666590 aaagataagggttaa 21666576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 705 - 741
Target Start/End: Complemental strand, 15543714 - 15543678
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggg 741  Q
    |||||||| ||||||||||||||||||||||||||||    
T  15543714 tgcacctgctgatcgcacggtgatccttacgtgcggg 15543678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 727853 - 727892
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  727853 ctgcacctgctgatcgcacgttgatccttacgtgcggggt 727892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 3591767 - 3591681
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 435  Q
    ||||||||  |||||| |||||||| ||||| |||| ||||||||||| || ||| || ||   |||||||||||||| |||||||||||    
T  3591767 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagag---tatcgtatccacatagattgtcgttt 3591681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 18735952 - 18735913
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  18735952 ctgcacttgttgatcgcacgatgatccttacgtgcggggt 18735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 739
Target Start/End: Original strand, 18826041 - 18826076
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcg 739  Q
    |||||||||||||| |||||||||||||||||||||    
T  18826041 ctgcacctgttgattgcacggtgatccttacgtgcg 18826076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 21334464 - 21334425
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  21334464 ctgcacctgttgatcgcactgtgatccttatgtgcggggt 21334425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 25404176 - 25404137
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  25404176 ctgcacatgttgatcgcacggtgatccctacgtgcggggt 25404137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 557
Target Start/End: Complemental strand, 32382969 - 32382915
Alignment:
Q  502 attgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    |||||||||||||| ||||||||||| ||||| |||| || |||||||||||||||    
T  32382969 attgcaatttttatctgtttgcaacagagcaaattacctg-ttttggttgcagaaa 32382915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 32383112 - 32383065
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaa 393  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||    
T  32383112 tgatggtcaaattaggcaagtgtaccaaatcgtttaccaagtaataaa 32383065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 531 - 565
Target Start/End: Original strand, 155183 - 155217
Alignment:
Q  531 caagttacttgtttttggttgcagaaaaggaaaca 565  Q
    |||||||| ||||||||||||||||||||||||||    
T  155183 caagttacctgtttttggttgcagaaaaggaaaca 155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 346 - 462
Target Start/End: Original strand, 17837502 - 17837615
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||  |||||||||||||||| |  |||||| ||   |||| |||||||| |||||||| |||  ||||||||    
T  17837502 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagag---tatcatatccacaaggattgtcattttgtctaaaca 17837598  T
Q  446 gttcgtgttatttattt 462  Q
     |||| |||| ||||||    
T  17837599 attcgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 705 - 743
Target Start/End: Original strand, 18830868 - 18830906
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  18830868 tgcacctgctgatcgcacggtgatccttacatgcggggt 18830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 689 - 743
Target Start/End: Complemental strand, 21972169 - 21972115
Alignment:
Q  689 tagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||| || |||||| |||||||| |||||||| |||||||||||||||| ||||    
T  21972169 tagtcagtcgtcaagttgcacctgctgatcgcagggtgatccttacgtgcagggt 21972115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 695 - 777
Target Start/End: Original strand, 22620590 - 22620672
Alignment:
Q  695 gttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    ||||||||| ||||| ||||||||||||| ||||| |||| |||||| |  |||||||||||   ||| ||||||||| ||||    
T  22620590 gttgtcaagttgcacatgttgatcgcacgatgatcattacatgcgggatccatactatctcggtcgatttaggtctattcctc 22620672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 557
Target Start/End: Original strand, 44795507 - 44795561
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    ||||||||||||| |||||||| || ||| |||||  ||||||||||||||||||    
T  44795507 ttgcaatttttatatgtttgcagcaaagcgagttatctgtttttggttgcagaaa 44795561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 14781827 - 14781770
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 559  Q
    ||||||||||||| |||||||| || ||||| || || ||||||||||||||||||||    
T  14781827 ttgcaatttttatatgtttgcatcagagcaaatttacctgtttttggttgcagaaaag 14781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 16916907 - 16916850
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| | ||||||||| ||| || |||| ||||||||||||||||||||    
T  16916907 ttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaag 16916850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 21987955 - 21987898
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaa-gttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||| |||||  |||| |||||||||||||| |||||    
T  21987955 ttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaag 21987898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 346 - 437
Target Start/End: Complemental strand, 27117832 - 27117744
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 437  Q
    ||||||||  |||||| |||| ||| ||||| |||||||||||||||| || |||||| ||   ||| |||| |||||| ||||||||||||    
T  27117832 tgatggtcggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagag---tattgtattcacatgaattgtcgtttca 27117744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 158; Significance: 1e-83; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 383 - 756
Target Start/End: Complemental strand, 43304 - 42938
Alignment:
Q  383 caagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaata 482  Q
    ||||||||||| || |||||||||||    |||||||||| ||||||||||||| ||||||||| |||||||| |||||| || ||||||||||||||||    
T  43304 caagtaataaagtgataagtaaagtaa---cgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattttaaattgacgatataaaata 43208  T
Q  483 taagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttg 582  Q
     ||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||  ||| | || ||| |||| ||||    
T  43207 aaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacctgtttttggttacagaaaacaaaatagcggttaagactctttg 43108  T
Q  583 aatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt 682  Q
    |||| ||||| ||||||   |||||||||||| ||||| || ||||||  ||||||||||||||| || | |||  || ||||||| ||||||||| |||    
T  43107 aatc-cccctgtttata---ttgttggataattaataacattcatgtcaagtttagttatcttaagtagattatgtaactgatgaggctgttgggaagtt 43012  T
Q  683 ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcg 756  Q
    |||||||||| ||||||||| |||||||||||||| ||| |  |||||||||||||||||| |||| |||||||    
T  43011 ctaacctagttggttgtcaaactgcacctgttgattgcatgacgatccttacgtgcggggtctatattatctcg 42938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 705 - 743
Target Start/End: Complemental strand, 42906 - 42868
Alignment:
Q  705 tgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  42906 tgcacctgatgatcgcacggtgatccttacgtgtggggt 42868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 158; Significance: 1e-83; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 346 - 722
Target Start/End: Original strand, 54845 - 55215
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt-catctaaac 444  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| || |||||| |||| |   ||||||||| |||||||||||| | ||||||     
T  54845 tgatggtcggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatt---gtatccacagggattgtcgttttcgtctaaat 54941  T
Q  445 agttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
    || | | |||| |||||| ||||| ||||||||||||| || || |||| |||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  54942 agcttgcgttacttattttaagttaacgatataaaataaaaaagataagggttagagattccaatttttatttgtttgcgacatagcaagttacctgttt 55041  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    ||||||||| ||||| |||||  | |||||||| |||||||| ||||||||||||   || ||||||||||||||| || ||||||||||||||| |||     
T  55042 ttggttgcacaaaagaaaacactggttaggactctttgaatc-cccctatttata---ttattggataataaataacattcatgtcgcgtttagtcatcc 55137  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcac 722  Q
    ||| || | ||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  55138 taagtatactatacaagtgatgaggccgttgggacgtcctaacctagtcggttgtcaagatgcacctgttggtcgcac 55215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 2e-82; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 346 - 789
Target Start/End: Original strand, 19786716 - 19787153
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||  |||| ||| ||||| |||||||||||||||| ||  ||||||||||   || |||||| | ||| ||||||||| || |||||    
T  19786716 tgatggtcggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagta---tcatatccatagggactgtcgtttcgtccaaaca 19786812  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
      |||||||| || ||| ||||||| ||||||||||| ||||| ||| |||||||||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  19786813 actcgtgttacttgttttaagttgatgatataaaataaaagagataaaagttagagattgtaatttttatctgtttgcaacagagcaagttacatgtttt 19786912  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    || ||| |||||||||||||  | |||||||| |||||||  ||| ||||||    ||||||||||| |||| |  || |||||||||||||||||||||    
T  19786913 tgattgtagaaaaggaaacaatggttaggactctttgaattccccttatttac---tttgttggatattaaaaagcattcatgtcgcgtttagttatctt 19787009  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgt 745  Q
    || |  | |||||| |||||||| | ||||||| ||||||||||||| |||||||||| |||||||| ||||||||||  ||||||||||| |||||| |    
T  19787010 aagtcgactatacaggtgatgaggccgttgggatgttctaacctagttggttgtcaagatgcacctgctgatcgcacgacgatccttacgtacggggtct 19787109  T
Q  746 atactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    ||||||||||   |||||||||| |||||||| ||||| |||||    
T  19787110 atactatctcagttgatctaggtttatccctccgatggctaact 19787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 356 - 789
Target Start/End: Original strand, 14528144 - 14528559
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||| | ||||| |||||||||||||||| || || ||| ||||   |||||||||||| |||||||||||| || |||||  ||  ||||    
T  14528144 attaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagta---tcgtatccacatagattgtcgtttcgtccaaacaactcacgtta 14528240  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcaga 555  Q
     |||||| ||  ||||||||||||||| || ||||||| ||||||||||||||||||||  ||||||||||| |||||||||| || ||| |||||||||    
T  14528241 cttattttaaactgacgatataaaataaaatagttaagggttagagattgcaatttttagctgtttgcaacaaagcaagttacctggttt-ggttgcaga 14528339  T
Q  556 aaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaata 655  Q
    |||| || || || ||         ||||||  ||||||||||   ||||||||||  |||||||| || ||||||||||||||||||||||||| | ||    
T  14528340 aaagtaagcagcggtt---------tgaatcctccctatttat---tttgttggatt-taaataaattc-atgtcgcgtttagttatcttaaatagacta 14528425  T
Q  656 tacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    ||||||||||||| || ||||||| || ||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||    
T  14528426 tacaagtgatgaggctattgggacattttaacctagtcggttgtcaagctgcacctgctggtcgcacggtgaaccttacgtgaggggtctatactatctc 14528525  T
Q  756 gactgatctaggtctatccctctgatgggtaact 789  Q
    |  ||||||||||||||||||||||||| |||||    
T  14528526 ggttgatctaggtctatccctctgatggataact 14528559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 346 - 660
Target Start/End: Complemental strand, 25182542 - 25182234
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||  ||||| || |||| ||||||||| ||||||| ||  ||||| ||||   |||||| ||||||||||||| |||| |||||||     
T  25182542 tgatggtcggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagta---tcgtattcacatggattgtcatttcgtctaaact 25182446  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
    | | | |||| |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||| | ||||||||| |||||||||| ||||||    
T  25182445 gcttgcgttacttattttaagttgacgatataaaataaaagagataagggttagagattgcaatttttatctatttgcaacagagcaagttacctgtttt 25182346  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    ||||||||||||||||||||  | |||||||| |||||||| ||| |||||   | ||||||||| | ||||||| || |||||| ||||||||||||||    
T  25182345 tggttgcagaaaaggaaacagtggttaggactctttgaatcccccatattt---actttgttggaaattaaataacattcatgtcacgtttagttatctt 25182249  T
Q  646 aaataaaatatacaa 660  Q
    || || | |||||||    
T  25182248 aagtagactatacaa 25182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 346 - 756
Target Start/End: Original strand, 34497100 - 34497502
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| |||||| |||| ||  ||||| |||||||||||||||| || | |||| ||||   ||||||||| |  || ||||||||| || |||||    
T  34497100 tgatggtcagattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagta---tcgtatccatagagactgtcgtttcgtccaaaca 34497196  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaa-gagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
     | |  |||| |||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||| | |||||||||||||| ||||| || ||    
T  34497197 atccacgttacttattttaaattgacgatataaaataaaagagttaaagggttagagattgcaatttttatctttttgcaacatagcatgttacctggtt 34497296  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    | | ||||||||||| || || || |||||| |  ||||||| |||||||| ||    |||||||||| ||||||| || |||||| | |||| ||||||    
T  34497297 t-gcttgcagaaaagtaagcagcggttaggattccttgaatc-cccctattcat----ttgttggatattaaataacattcatgtcacatttatttatct 34497390  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtg 744  Q
    ||| |||| |||| || |||||||   ||||||||||||||||||| ||| |||||||| ||||| || ||||| |||| ||||||||||||| |||||     
T  34497391 taagtaaactataaaattgatgaggtcgttgggacgttctaacctaatcgattgtcaagatgcacatgctgatcacacgatgatccttacgtgtggggtc 34497490  T
Q  745 tatactatctcg 756  Q
    ||||||||||||    
T  34497491 tatactatctcg 34497502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 410 - 640
Target Start/End: Original strand, 13697901 - 13698125
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaat 509  Q
    ||||||||||||| ||||| ||||||| || |||||    | |||| |||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  13697901 tatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttattttaagttgacgatataaaatacaagagataagggttagagattgcaat 13698000  T
Q  510 ttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttgg 609  Q
    |||||| | ||||||||| |||||||||| ||  |||||||||||||||| || ||  | ||| |||| |||||||| |||||||||   ||||||||||    
T  13698001 ttttatctctttgcaacagagcaagttacctg--tttggttgcagaaaagtaagcagtgattatgactctttgaatc-cccctattt---attttgttgg 13698094  T
Q  610 ataataaataaaatccatgtcgcgtttagtt 640  Q
    ||| ||||||| || || |||||||||||||    
T  13698095 atattaaataacattcacgtcgcgtttagtt 13698125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 497 - 743
Target Start/End: Original strand, 24644970 - 24645214
Alignment:
Q  497 tagagattgcaattttt--atttgtttgcaacatagcaa-gttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcaccccta 593  Q
    |||||||||||||||||  || | ||||||||||| ||| ||||| |||||||||||||||||||| || ||   || |||| | |||||||| ||||||    
T  24644970 tagagattgcaatttttttatctatttgcaacataacaaagttacctgtttttggttgcagaaaagtaagcagttttaaggaatctttgaatc-ccccta 24645068  T
Q  594 tttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtc 693  Q
    || ||    |||||||| | |||||||  | ||||||||||||||||||||||| || | ||||||||||||||| | ||||||||||||||||||| ||    
T  24645069 ttcat----ttgttgga-attaaataactttcatgtcgcgtttagttatcttaagtatactatacaagtgatgaggccgttgggacgttctaacctaatc 24645163  T
Q  694 ggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||| |||||| |||||||  |||| ||||||||||| |||||||||||||    
T  24645164 ggttcgtcaagttgcacctaatgattgcacggtgatctttacgtgcggggt 24645214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 363 - 665
Target Start/End: Complemental strand, 13315089 - 13314795
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| | |||||||||||||||||||| || |||||| ||||   ||||||||||||||||| | ||||| || ||||| |||| |||| ||||||    
T  13315089 aagtgtaccagatcatttaccaagtaataaagtgataagtatagta---tcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttattt 13314993  T
Q  463 aa--agttgacgatataaaatataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaa 558  Q
     |  ||||||||||||||    ||| || |||  |||||||| ||||||||||||| ||||||||||  | ||| || || |||||||||||||||||||    
T  13314992 tataagttgacgatataa----taaaagataaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgcagaaaa 13314897  T
Q  559 ggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatac 658  Q
    | || || || ||| || | || |||||  |||||||||||   |||||||||| ||||||| || ||||||||||||| ||||||||  || | |||||    
T  13314896 gtaagcaacggttaagattcttcgaatc--ccctatttata---ttgttggatattaaataacattcatgtcgcgtttatttatcttaggtagactatac 13314802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 356 - 668
Target Start/End: Original strand, 24269593 - 24269897
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| |||| ||||||||||||||||| ||| ||||| ||||   ||||||||||| ||||||||||||| || ||||| |||   |||    
T  24269593 attaggcaagtgtaccaaattatttaccaagtaataaagtgt-aagtagagta---tcgtatccacagggattgtcgtttcgtccaaacaattcacatta 24269688  T
Q  456 tttattt----aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttg 551  Q
    |||||||    ||  |||||| ||||||| |||||||||   |  |||   ||||||| ||||| ||||||||||| || |  |||| ||||||||||||    
T  24269689 tttatttttgtaagtttgacggtataaaaaataagagtttgaa--tag---ttgcaatctttatctgtttgcaacagagtagtttacctgtttttggttg 24269783  T
Q  552 cagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataa 651  Q
    |||||||| || || || |||||| | || ||||| ||||| ||||||   |||||||||| |||||| ||   |||||||||||| ||||||||  ||     
T  24269784 cagaaaagtaagcagcggttaggattcttcgaatcccccctgtttata---ttgttggatattaaatataagtaatgtcgcgtttatttatcttaggtag 24269880  T
Q  652 aatatacaagtgatgag 668  Q
    | |||||||||||||||    
T  24269881 actatacaagtgatgag 24269897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 344 - 515
Target Start/End: Complemental strand, 30806613 - 30806440
Alignment:
Q  344 aatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtac--tatcgtatccacatggattgtcgtttcatcta 441  Q
    ||||||||||  |||||| |||||||  ||||| ||||  |||||||||| || |||||| ||||   ||||   |||||| |||||||||||||||| |    
T  30806613 aatgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatcca 30806514  T
Q  442 aacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttat 515  Q
    |||| || | |||| |||||| |  |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30806513 aacaatttgcgttacttattttagtttgacgatataaaataaaagagttaagggttagagattgcaatttttat 30806440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 356 - 690
Target Start/End: Complemental strand, 24114386 - 24114059
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||  ||||||||||||||||||| |||||| ||||   |||||||| || ||||||||||||| || |||||  | | ||||    
T  24114386 attaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagta---tcgtatccgcagggattgtcgtttcgtccaaacaacttgcgtta 24114290  T
Q  456 tttattta---aagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttg 551  Q
     ||||||    ||||||||||||||||| ||||| ||||     || || ||||||||||||| |||||||| || |||||||| || |||||| |||      
T  24114289 cttatttttgtaagttgacgatataaaagataagggtta-----taaaggttgcaatttttatctgtttgcagcagagcaagtttacctgtttt-ggtat 24114196  T
Q  552 cagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataa 651  Q
    | |||||| || || || |||||| | || ||||| ||||||||||||   |||||||||||||| ||| |   ||| |||||||| ||||||||  ||     
T  24114195 ctgaaaagtaagcagcggttaggattcttcgaatcccccctatttata---ttgttggataataagtaacagtaatgacgcgtttatttatcttaggtag 24114099  T
Q  652 aatatacaagtgatgagactgttgggacgtt-ctaaccta 690  Q
    | ||||||||||||||| |  |||||||||| ||||||||    
T  24114098 actatacaagtgatgaggccattgggacgttactaaccta 24114059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 356 - 559
Target Start/End: Complemental strand, 29382465 - 29382265
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| ||||   ||||||||||| |||||||||||||||| ||||| || | ||||    
T  29382465 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacagggattgtcgtttcatccaaacaatttgcgtta 29382369  T
Q  456 tttatt----taaagttgacgatataaaatataagagttaagagttag--agattgcaatttttatttgtttgcaacatagcaagt-tacttgtttttgg 548  Q
     |||||    |||  |||||||||||||       ||||||  |||||  || ||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  29382368 cttatttttgtaagtttgacgatataaa-------agttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctatttttgg 29382276  T
Q  549 ttgcagaaaag 559  Q
    |||||||||||    
T  29382275 ttgcagaaaag 29382265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 499 - 782
Target Start/End: Original strand, 7983716 - 7983983
Alignment:
Q  499 gagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttat 598  Q
    ||||||||||||||||| ||||||| |||||||||||| | || ||| ||||||||||||| || || ||  ||||| | |||||||| |||||||||||    
T  7983716 gagattgcaatttttatctgtttgcgacatagcaagttgcctggttt-ggttgcagaaaagtaagcaacgggtaggattctttgaatc-cccctatttat 7983813  T
Q  599 aattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttg 698  Q
       ||||||||||  | || || || ||||| | ||||||||||||||  || | ||||||| |||| ||        | |||||| |||||||||||||    
T  7983814 ---tttgttggat--ttaaaaacattcatgttgtgtttagttatcttatgtagactatacaaatgattag--------gtcgttcttacctagtcggttg 7983900  T
Q  699 tcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatg 782  Q
    |||||||| ||||| |||| |||| |||||||||||||||||||| |||| ||| |||  ||| || ||| |||||||| ||||    
T  7983901 tcaagctg-acctgctgattgcacagtgatccttacgtgcggggtctatattatatcggttgaacttggtttatccctccgatg 7983983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 518 - 750
Target Start/End: Complemental strand, 26394644 - 26394416
Alignment:
Q  518 gtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataa 616  Q
    |||||||||| |||||||| || |||||| ||||||||||||| || || || |||||| | || ||||| ||||||||||||   ||||| |||| |||    
T  26394644 gtttgcaacaaagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaatc-cccctatttata---ttgttagatattaa 26394550  T
Q  617 ataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtcaagctgcacctgttg 715  Q
    |||| |   |||||||||||| ||||||||  || | ||||||||||||||| | ||||||||||  |||||||| ||||| | ||||| |||| |||||    
T  26394549 ataacagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgaggccgttgggacgtggctaacctaatcggtcg-caagcagcacatgttg 26394451  T
Q  716 atcgcacggtgatccttacgtgcggggtgtatact 750  Q
    ||| || ||||||||||||||| | ||| ||||||    
T  26394450 atcacatggtgatccttacgtgtgaggtctatact 26394416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 556
Target Start/End: Complemental strand, 44010990 - 44010931
Alignment:
Q  497 tagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaa 556  Q
    ||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||    
T  44010990 tagagattgcaatttttatatgtttgcaacagaacaagttacatgtttttggttgcagaa 44010931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 356 - 557
Target Start/End: Original strand, 6884953 - 6885150
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||||||||| | |||| ||||||||| || ||||| |     ||||||||| ||||||||||||||||| || |||||  | | | ||    
T  6884953 attaggcaagtgtactaaatcgtgtacccagtaataaagtgataagtgag----tatcgtatctacatggattgtcgtttcgtccaaacaacttgcgcta 6885048  T
Q  456 tttatttaaagtt-gacgatataaaatataagagttaagagtt-agagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgc 552  Q
     |||||| ||||| |||||||  ||||| ||||| |||| ||| ||||||| ||||||||||| |||||| || | || ||||||| |||||||||||||    
T  6885049 cttattttaagtttgacgata--aaata-aagagataagggtttagagatttgcaatttttatctgtttgtaatagagtaagttacctgtttttggttgc 6885145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 462
Target Start/End: Original strand, 5850926 - 5851039
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||  ||||||||  |||| |||||||||||||||| || |||||| ||||   |||||||||||| ||||||||||||| | |||||    
T  5850926 tgatggtcggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatagattgtcgtttcaaccaaaca 5851022  T
Q  446 gttcgtgttatttattt 462  Q
     | ||||||| ||||||    
T  5851023 atccgtgttacttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 675 - 743
Target Start/End: Original strand, 9642182 - 9642251
Alignment:
Q  675 gggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||||| |||||| |||||| ||||||| |  ||||||| ||||||||||||||||||||    
T  9642182 gggacgttctaacctaatcggtttgtcaagttgcacctatgtatcgcacagtgatccttacgtgcggggt 9642251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 346 - 461
Target Start/End: Original strand, 15238784 - 15238896
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||  ||||  |||||||||||| |||||| ||||||    | ||||||||||||||| ||||||||||| ||||||||    
T  15238784 tgatggtcgaattaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagta---gattatcgtatccacatgaattgtcgtttcgtctaaaca 15238880  T
Q  446 gttcgtgttatttatt 461  Q
     |||| |||| |||||    
T  15238881 attcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 727 - 788
Target Start/End: Complemental strand, 25182203 - 25182142
Alignment:
Q  727 atccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaac 788  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| || |||||| ||||    
T  25182203 atccttacgtgcggggtctatactatctcggttgatctaggtctatcactttgatggctaac 25182142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 502 - 734
Target Start/End: Complemental strand, 30122115 - 30121887
Alignment:
Q  502 attgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataat 601  Q
    |||||||||||||| |||||| |||| || ||||||| | |||| ||||||||||||| || ||  | |||  ||| |||||||  |||||||||||       
T  30122115 attgcaatttttatctgtttgtaacagagtaagttacctatttt-ggttgcagaaaagtaagcagtggttataactctttgaattccccctatttat--- 30122020  T
Q  602 tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggga-cgttctaacctagtcg-gttgt 699  Q
     |||||||| | |||||||  |  |||||| ||||||||||||||| || | |||  |||||||||| |||| |||| |   |||||||| |||  ||||    
T  30122019 -ttgttgga-attaaataacttttatgtcgtgtttagttatcttaagtagactatctaagtgatgagtctgtcgggatctaactaacctaatcgatttgt 30121922  T
Q  700 caagctgcacctgttgatcgcacggtgatccttac 734  Q
    |||| |||||||| |||||||||||||||| ||||    
T  30121921 caagttgcacctggtgatcgcacggtgatctttac 30121887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 18448502 - 18448446
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    ||||| ||||||| ||||||||||| |||||||||| |||||||||||||| |||||    
T  18448502 ttgcagtttttatctgtttgcaacagagcaagttacctgtttttggttgcataaaag 18448446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 18448290 - 18448251
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  18448290 ctgcacctgctgatcgcacggtgatccttacgtgcggggt 18448251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 677 - 743
Target Start/End: Complemental strand, 23867828 - 23867761
Alignment:
Q  677 gacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||| || ||| |||||| |||||||| ||||||||||||||||||||| || |||||    
T  23867828 gacgttctaacctaatcagttagtcaagttgcacctgctgatcgcacggtgatccttacatgtggggt 23867761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 625 - 743
Target Start/End: Original strand, 27659691 - 27659809
Alignment:
Q  625 catgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacg 723  Q
    ||||||||||||| ||||||||  || |  ||||||||||||||   |||| |||||  ||||||||| ||||||  ||||||||| || ||||| ||||    
T  27659691 catgtcgcgtttatttatcttaggtagaccatacaagtgatgaggtcgttgtgacgtgactaacctagacggttgg-aagctgcacttgctgatcacacg 27659789  T
Q  724 gtgatccttacgtgcggggt 743  Q
    |||||||||||||| |||||    
T  27659790 gtgatccttacgtgtggggt 27659809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 14075590 - 14075667
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 437  Q
    ||||| || ||||| ||||| |||||||||||| ||| || |||||| |   |||||||||||||||||||||||||||||    
T  14075590 ttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtaga---ctatcgtatccacatggattgtcgtttca 14075667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 2637615 - 2637679
Alignment:
Q  378 tttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||| ||||||||||| || |||||| ||||   ||||||||||||||||||||||||| ||||||||    
T  2637615 tttatcaagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcgtctaaaca 2637679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 358 - 445
Target Start/End: Original strand, 24904630 - 24904714
Alignment:
Q  358 taggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||| |||||||| |||||||||||||| ||||||| || |||||| ||   |||| ||||||||  |||||||||||| ||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagag---tatcatatccacagtgattgtcgtttcgtctaaaca 24904714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 17101990 - 17101911
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||||||  ||||| |||||||||||||||| || |||||| ||||   ||||||||| | |||||||||||||||| |||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccatagggattgtcgtttcatccaaaca 17101911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 586
Target Start/End: Original strand, 18569193 - 18569276
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatc 586  Q
    |||| |||||||| ||||||||||||||| || ||||||| ||||||||||||||||| || || || ||| || ||||||||||    
T  18569193 ttgctatttttatctgtttgcaacatagcgagtttacttg-ttttggttgcagaaaagtaagcagcggttacgattttttgaatc 18569276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 510 - 668
Target Start/End: Complemental strand, 24110623 - 24110468
Alignment:
Q  510 ttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttgg 609  Q
    |||||| ||||||||||| || |||||  |   ||||||||||||||||| || ||  | |||||| | || ||||| ||||| ||||||   |||||||    
T  24110623 ttttatctgtttgcaacagaggaagtttatctgttttggttgcagaaaagtaagcaggggttaggattattcgaatcccccctgtttata---ttgttgg 24110527  T
Q  610 ataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgag 668  Q
    ||||||| ||| |   |||||||||||| ||||||||  || | |||||||||||||||    
T  24110526 ataataagtaacagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgag 24110468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 14006091 - 14006142
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 408  Q
    |||||||||||||  | ||||||||||||||||||||||| |||||| ||||    
T  14006091 ttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagta 14006142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 748
Target Start/End: Original strand, 14626289 - 14626383
Alignment:
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtata 748  Q
    ||||||||||||||| | ||||||||||| |||| ||| | |||| | || |||||| || ||||| |||||||||||||||||| ||||| ||||    
T  14626289 tatacaagtgatgagtccgttgggacgttactaaactaataggtt-tgaaactgcacttgctgatcacacggtgatccttacgtgtggggtctata 14626383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 739
Target Start/End: Original strand, 16404298 - 16404333
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcg 739  Q
    |||||||||||||||||||| |||||||||||||||    
T  16404298 ctgcacctgttgatcgcacgatgatccttacgtgcg 16404333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 19264428 - 19264467
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  19264428 ctgcacctgatgatcgcacggtgattcttacgtgcggggt 19264467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 26008019 - 26008070
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 408  Q
    ||||| |||||||| |||||||||||||||||||||| || |||||| ||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagta 26008070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 31288354 - 31288430
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 437  Q
    ||||| |||||||| ||||| |||||||||||||||| || |||||||||   ||||||||||| | |||||||| |||||    
T  31288354 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaag---tatcgtatccatagggattgtcttttca 31288430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 405
Target Start/End: Original strand, 14628371 - 14628420
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaa 405  Q
    |||||| |||| ||| ||||||||||||||||||||| ||| ||||||||    
T  14628371 attaggcaagtttaccaaatcatttaccaagtaataatatgataagtaaa 14628420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 24110752 - 24110707
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagta 408  Q
    |||||||  ||||||||||||||||||||||||| |||||| ||||    
T  24110752 aagtgtatcaaatcatttaccaagtaataaaatgataagtagagta 24110707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 734
Target Start/End: Complemental strand, 28276543 - 28276490
Alignment:
Q  681 ttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttac 734  Q
    ||||||| ||||| || |||||| |||||||| |||||||| ||||||||||||    
T  28276543 ttctaacttagtcagtcgtcaagttgcacctgatgatcgcatggtgatccttac 28276490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 405
Target Start/End: Original strand, 30235372 - 30235421
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaa 405  Q
    |||||| |||||||| ||||| |||||||||||||||| || ||||||||    
T  30235372 attaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagtaaa 30235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 133; Significance: 1e-68; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 356 - 743
Target Start/End: Original strand, 39579 - 39959
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt-tcgtgtt 454  Q
    |||||| |||||||| |||| ||||||||||||||||| || |||||| || |   |||||||||||| |||||| ||||  || ||| |   ||   ||    
T  39579 attaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagca---tcgtatccacattgattgttgttttgtccaaaaaaactcacttt 39675  T
Q  455 atttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 554  Q
    | |||||| ||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| || ||||||||||||    
T  39676 acttattttaagttgacgatataaaataaaagagataagaattagagattgcaatttttatctgtttgcaacagagcaagttacctg-ttttggttgcag 39774  T
Q  555 aaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaat 654  Q
    ||||| || || || ||| |||| |||||||| |||||||||   |||||||||||   ||||| | || ||| |  |||||||||||||||| || | |    
T  39775 aaaagtaagcagcggttatgactctttgaatcccccctattt---attttgttgga-gttaaattacattcatcttacgtttagttatcttaagtagact 39870  T
Q  655 atacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  39871 atacaagtgatgtggtcgttgggacgttctaacctagtcggttgtcaagctgcacctgctgagcgcacggtgatccttacgtacggggt 39959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 128; Significance: 1e-65; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 348 - 749
Target Start/End: Original strand, 715 - 1107
Alignment:
Q  348 atggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt 447  Q
    ||||||| |||||| |||||||| ||||| |||||||||||||||| || |||||| |||| |   ||||| ||| ||||||||||||| || ||||| |    
T  715 atggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatt---gtatcaacaaggattgtcgtttcgtccaaacaat 811  T
Q  448 tcgt-gttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttttt 546  Q
     ||  |||| |||||| ||||||| ||||||||||| |||||||||| |||||||||| |||||||||  ||||||||||| || ||| ||| |||||      
T  812 ccgacgttacttattttaagttgaagatataaaataaaagagttaagggttagagatttcaatttttacctgtttgcaacagagtaagatacctgttt-- 909  T
Q  547 ggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctta 646  Q
    ||||| ||||||  || || || |||||||| |||||||| |||||||||||   ||||||||| | ||||||| || ||||||||||||| ||||||||    
T  910 ggttgtagaaaactaagcagcggttaggactctttgaatc-cccctatttat---tttgttgga-attaaataacattcatgtcgcgtttaattatctta 1004  T
Q  647 aataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgta 746  Q
    | || | |||| |||||||||||   ||| ||||||||||| |||||||||||||||||| ||||  ||||| ||||| |||||||||||||||||| ||    
T  1005 attagactataaaagtgatgagatcattgagacgttctaacttagtcggttgtcaagctgaacctactgatcacacggcgatccttacgtgcggggtcta 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 625 - 778
Target Start/End: Complemental strand, 1506 - 1353
Alignment:
Q  625 catgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacgg 724  Q
    |||||||  |||| ||||||||| || | | |||||||||||||   |||||| ||||||||| || |  |||  |||||||||| ||||||| ||| ||    
T  1506 catgtcgtatttatttatcttaagtagactgtacaagtgatgaggtcgttgggccgttctaacttaataagtttccaagctgcacttgttgattgcatgg 1407  T
Q  725 tgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctct 778  Q
    ||||||||| ||| ||||| |||| ||||||||  ||| |||||||||||||||    
T  1406 tgatccttatgtgtggggtctatattatctcgatcgatttaggtctatccctct 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 4e-62; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 346 - 769
Target Start/End: Complemental strand, 12806004 - 12805592
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||||| || |||||| ||||   || ||||||||||||||||||||||||| |||||    
T  12806004 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagta---tcatatccacatggattgtcgtttcatccaaaca 12805908  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
     || | |||| |||||| |||| |||| ||||||||| |||| | ||| ||||||||||||||||||||| ||||||||||| || || |||| ||  ||    
T  12805907 atttgcgttacttattttaagtcgacgttataaaataaaagattaaagggttagagattgcaatttttatctgtttgcaacagagaaaattacctg-att 12805809  T
Q  546 tggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctt 645  Q
    |||||||||||||| || ||  | |||||| | || ||||   |||||| |   ||||||||||  | ||||||| || ||||||||||||| |||| ||    
T  12805808 tggttgcagaaaagtaagcaggggttaggattcttcgaat---ccctatct---attttgttgg-cattaaataacattcatgtcgcgtttatttatatt 12805716  T
Q  646 aaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgt 745  Q
    || || | |||| ||||||||||   ||||||  |||||||| || |||||||||||||||||||| |||||| |||  ||||||||| |||||||||||    
T  12805715 aagtagactatataagtgatgaggtcgttgggctgttctaacgtattcggttgtcaagctgcacctattgatcacacaatgatccttatgtgcggggtgt 12805616  T
Q  746 atactatctcgactgatctaggtc 769  Q
    ||| ||||||   |||||||||||    
T  12805615 atattatctcagttgatctaggtc 12805592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 356 - 777
Target Start/End: Original strand, 21325335 - 21325747
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||  |||||||||||||||| || |||||| ||||   |||||||||||   ||||||||||| || ||||| || ||||||    
T  21325335 attaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagta---tcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgtta 21325431  T
Q  456 tttatttaaagttgacgatataaaatataagagtt-aagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcag 554  Q
     |||||| ||||| ||||||||||||| ||||||| ||| ||||||||||||||||||||| | ||||||||| |||||||||| |   |||||||||||    
T  21325432 cttattttaagttaacgatataaaataaaagagttgaagggttagagattgcaatttttatctatttgcaacagagcaagttacct-aatttggttgcag 21325530  T
Q  555 aaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaat 654  Q
    ||||| ||  | || ||| || | || | ||  ||||||||||    ||||||||||| ||||||| |  |||||||| |||| ||||||||| |  | |    
T  21325531 aaaagtaagtagcggttatgattcttcgcat--cccctattta----tttgttggatattaaataacagtcatgtcgcttttatttatcttaagttgact 21325624  T
Q  655 atacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatct 754  Q
    ||||||| ||||||   ||||||||||| ||||||| | |||||||||| ||||| |||||||| ||| |||||||||||||||||||| ||||||||||    
T  21325625 atacaagcgatgaggtcgttgggacgttttaacctaattggttgtcaagttgcacatgttgatcacacagtgatccttacgtgcggggtctatactatct 21325724  T
Q  755 cgactgatctaggtctatccctc 777  Q
    ||  |||| | ||||||||||||    
T  21325725 cggttgatttcggtctatccctc 21325747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 363 - 690
Target Start/End: Complemental strand, 21303451 - 21303132
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||  ||||| |||||||| |||||||||| |||||| ||||   ||||| |||||  |||||| |||||||| ||||| ||   |||| ||||||    
T  21303451 aagtgtatcaaatcgtttaccaaataataaaatgataagtagagta---tcgtagccacaaagattgttgtttcatccaaacaatttccgttacttattt 21303355  T
Q  463 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaa 562  Q
     |||||||| |||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||    
T  21303354 taagttgactatataaaataaaagagtaaagggttagagattgcaatttttatctgtttgcaacagagcaagttacttg-ttttggttgcagaaaagtaa 21303256  T
Q  563 acatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagt 662  Q
     || || |||||| | |||||||| ||||||||||    ||||||||||| ||||||  |   |||||| ||||| ||| ||||| || | |||| ||||    
T  21303255 gcagcggttaggattatttgaatcccccctattta----tttgttggatattaaatagcagtaatgtcgtgtttatttaccttaagtagactatataagt 21303160  T
Q  663 gatgagactgttgggacgttctaaccta 690  Q
    ||||||  ||||||||| ||||||||||    
T  21303159 gatgaggttgttgggacattctaaccta 21303132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 470 - 774
Target Start/End: Original strand, 17155898 - 17156195
Alignment:
Q  470 acgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgt 569  Q
    ||||||||||| | |||||||| | |||||| |||||||||||||| ||||||||||| |||||||||| | |||  ||||||||||||| ||  | ||     
T  17155898 acgatataaaaaaaaagagttacgggttagaaattgcaatttttatctgtttgcaacagagcaagttacctattt--ggttgcagaaaagtaagtagcga 17155995  T
Q  570 ttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgaga 669  Q
    |||||||| ||||||||  ||||||  || ||||||||||| | ||||||| || |||||| |||||||| ||||||| || | |||||||||||||||     
T  17155996 ttaggactatttgaatc--ccctat--attattttgttgga-attaaataacattcatgtcacgtttagtaatcttaagtagactatacaagtgatgagg 17156090  T
Q  670 ctgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtc 769  Q
    | |||||||  |||||||||| | |||| |||||||||||||  | |||||||| ||||||||| |||| | || ||||||||||||  |||||||||||    
T  17156091 ccgttgggatattctaacctaatgggttctcaagctgcacctacttatcgcacgatgatccttatgtgcagtgtatatactatctcggttgatctaggtc 17156190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 346 - 738
Target Start/End: Original strand, 8319025 - 8319416
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||| |||||| |||| ||| || || ||||||||||||| || || |||||| | ||   | ||||||||| ||||| ||||||| |  |||||    
T  8319025 tgatggtcagattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaata---tagtatccacagggattatcgtttcgtacaaaca 8319120  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttattt------gtttgcaacatagcaagttact 539  Q
     ||| ||||| |||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||      ||| |||||||||||| ||||     
T  8319121 attcatgttacttattttaagttgatgatataaaatacaagagataagagttagagattgcaattttttttttcttctgttagcaacatagcaaattacc 8319220  T
Q  540 tgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccc-tatttataattttgttggataataaataaaatccatgtcgcgtttag 638  Q
    | |||| ||||||| ||||| || ||  | |||||||| |||||||| |||| |||||||   ||||||||||| ||||||| || |||||| ||||||     
T  8319221 tatttt-ggttgcataaaagtaagcagtggttaggactctttgaatccccccctatttat---tttgttggatattaaataacattcatgtcacgtttaa 8319316  T
Q  639 ttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgc 738  Q
    |||||||||||| | ||| ||| |||||||    ||| |||||||  |||||||||||||||||| || ||| | || ||||||||||||||||||||||    
T  8319317 ttatcttaaatagactatgcaactgatgaggtccttgtgacgttcctacctagtcggttgtcaagttgtacccgctggtcgcacggtgatccttacgtgc 8319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 467 - 777
Target Start/End: Complemental strand, 2723831 - 2723535
Alignment:
Q  467 ttgacgatataaaatataagagttaagagttagagattgcaa-tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaaca 565  Q
    |||| ||||||||||| | |||||||| |||||| ||||||| ||||||| ||||||||||| |||||||||| |||||  ||||||| ||||| || ||    
T  2723831 ttgatgatataaaataaatgagttaagggttagatattgcaaatttttatctgtttgcaacaaagcaagttacctgttt--ggttgcaaaaaagtaagca 2723734  T
Q  566 tcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgat 665  Q
     || ||| |||| ||||||||  | ||||||||   ||||||||| | ||||||| || |||||||| |||||||||||||||||       ||||||||    
T  2723733 gcggttaagactatttgaatc--ctctatttat---tttgttgga-attaaataacattcatgtcgcatttagttatcttaaata-------caagtgat 2723647  T
Q  666 gagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatcta 765  Q
    | | | ||||||||||| |||| ||||  |||| ||||||||||||| | | |||||||||||||||||||||||||| ||||||||||||  |||| ||    
T  2723646 gcggccgttgggacgttgtaacttagtttgttgccaagctgcacctgcttaccgcacggtgatccttacgtgcggggtctatactatctcggttgatata 2723547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 475 - 737
Target Start/End: Original strand, 41508477 - 41508736
Alignment:
Q  475 ataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttag 573  Q
    |||||||| |||||||||| |||||||||| ||||||| ||| ||||||||||| |||||||||| |||||| ||||||||||||| || || || |||     
T  41508477 ataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagttacatgtttt-ggttgcagaaaagtaaccagcggttaa 41508575  T
Q  574 gactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgt 673  Q
    || | |||||||| ||||| ||||||   |||||||||| ||||||| |   ||||| | |||| ||||||||  || | ||||||||||| ||| | ||    
T  41508576 gattctttgaatc-cccctctttata---ttgttggatattaaataacagtaatgtcacatttatttatcttaggtagattatacaagtgacgaggccgt 41508671  T
Q  674 tgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtg 737  Q
    || |||||| |||||||| ||||| | ||||||||| ||||||||| ||||||||||||||||||    
T  41508672 tgtgacgttactaacctaatcggtcgccaagctgcatctgttgatcacacggtgatccttacgtg 41508736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 626 - 756
Target Start/End: Original strand, 38083814 - 38083944
Alignment:
Q  626 atgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggt 725  Q
    |||| ||||||||||||||||| || | ||||||||||||||  | |||| ||| ||||||||||||||||| |||||||||| ||| |||| |||||||    
T  38083814 atgttgcgtttagttatcttaagtagactatacaagtgatgatgccgttgagacattctaacctagtcggttatcaagctgcatctgctgattgcacggt 38083913  T
Q  726 gatccttacgtgcggggtgtatactatctcg 756  Q
    |||||||||||||||||| ||||||||||||    
T  38083914 gatccttacgtgcggggtctatactatctcg 38083944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 570 - 738
Target Start/End: Original strand, 8267136 - 8267301
Alignment:
Q  570 ttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgaga 669  Q
    |||||||| |||||||| |||||||||||   ||||||||||| ||||||| || |||||| |||||| |||||||||||| | ||| ||| |||||||     
T  8267136 ttaggactctttgaatcccccctatttat---tttgttggatattaaataacattcatgtcacgtttaattatcttaaatagactatgcaactgatgagg 8267232  T
Q  670 ctgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgc 738  Q
      |||| |||||||  ||||||||||||||||||||||||| | |||||||| ||||||| ||||||||    
T  8267233 tcgttgtgacgttcctacctagtcggttgtcaagctgcacccgctgatcgcaaggtgatctttacgtgc 8267301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 356 - 748
Target Start/End: Original strand, 21301913 - 21302298
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||| |||||||||||||||| || |||||| ||   |||||||||||||||||||||| |||| || ||||| |||| ||||    
T  21301913 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagag---tatcgtatccacatggattgtcatttcgtccaaacaattcgagtta 21302009  T
Q  456 tttattt---aaagttgacgatataaaatataagagttaagagttagag-attgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggtt 550  Q
     ||||||    || |||||||||||    |||| || || | |||||||  ||| ||||||||| ||||||||||| |||||| |||| | |||||| ||    
T  21302010 cttatttttgtaaattgacgatata----ataaaagatatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttttgatt 21302105  T
Q  551 gcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaata 650  Q
    ||||||||  ||||| || |||||| | || ||||| ||||| |||||| |     |||||| ||||||| |  |||||||| |||| | ||||||  ||    
T  21302106 gcagaaaaataaacagcggttaggattcttcgaatc-cccctgtttatact----gtggatattaaataacagtcatgtcgcatttattaatcttaggta 21302200  T
Q  651 aaatatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtata 748  Q
     | ||||||||||||||| | ||||||||||  |||||||||  | |||  |||||||||||| ||||| |||||||||||||||||| ||||| ||||    
T  21302201 gactatacaagtgatgaggccgttgggacgtgactaacctagaagattg-aaagctgcacctgctgatcacacggtgatccttacgtgtggggtctata 21302298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 356 - 736
Target Start/End: Complemental strand, 21825972 - 21825601
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||| ||||| ||||   ||||||||||||||||| | ||||| || |||||||||| ||||    
T  21825972 attaggtaagtgtaccaaatcgtttaccgagtaataaagtgt-aagtagagta---tcgtatccacatggatttttgtttcgtccaaacagttcgcgtta 21825877  T
Q  456 tttatttaaagttgacgatata-aaatataagagttaagagtta-gagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     ||||||    || || | ||| ||||| ||||||| |  | || ||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  21825876 cttatttggt-ttaacaaaatataaata-aagagttgatggataagagattgcaatttttatctgtttgtaacatagcaagttacct-tttttggttgca 21825780  T
Q  554 gaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaa 653  Q
    |||||| ||  |    |||||||| |||||||| ||||||| |    |||||||||| | ||||||| || ||||  || |||||||||| ||| || |     
T  21825779 gaaaagtaagtaagagttaggactctttgaatcccccctatgt----ttttgttgga-attaaataacattcatgctgcatttagttatcgtaagtagac 21825685  T
Q  654 tatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgt 736  Q
    |||  |||||||||| |  | |||||||||||||||| ||| || |||| |  |||||||||||||||||||||||||||||||    
T  21825684 tatctaagtgatgagtcaatcgggacgttctaacctaatcgattcgtcatgtagcacctgttgatcgcacggtgatccttacgt 21825601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 363 - 559
Target Start/End: Complemental strand, 16245826 - 16245634
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| || || |||||||||||||||| || |||||| ||||   || |||||||||||||| || |||| || ||||| |||  |||| ||||||    
T  16245826 aagtgtaccaactcgtttaccaagtaataaagtgataagtagagta---tcatatccacatggattatcatttcgtccaaacaattctcgttacttattt 16245730  T
Q  463 aaagttgacgatataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
     |  ||||| |||  ||||| |||||||||| |||||||||| ||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  16245729 tagtttgacaata--aaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagttacctgtttttggttgcagaaaag 16245634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 614 - 736
Target Start/End: Complemental strand, 31285870 - 31285747
Alignment:
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctg 712  Q
    ||||||| || |||||| |||||| ||||||||| || | ||||||||||||||| |  ||||||||||||||||||||||||| |||||| ||||||||    
T  31285870 taaataacattcatgtcacgtttatttatcttaagtagactatacaagtgatgaggccattgggacgttctaacctagtcggttcgtcaagttgcacctg 31285771  T
Q  713 ttgatcgcacggtgatccttacgt 736  Q
    ||||| ||| | ||||||||||||    
T  31285770 ttgattgcaggatgatccttacgt 31285747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 356 - 742
Target Start/End: Complemental strand, 3116522 - 3116144
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||| ||||  |||||||||||||||| || ||||| |     ||| ||||||||| ||||||||||||| || ||||| |||  ||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtgag----tatagtatccacagggattgtcgtttcgtccaaacaattcacgtta 3116427  T
Q  456 tttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     |||||| ||||||||||||  ||||| ||||| |||| |||| |||||| ||||||||||| ||||||||||| |||||| ||| || |||||||||||    
T  3116426 cttattttaagttgacgata--aaata-aagagataagggttaagagatttgcaatttttatctgtttgcaacagagcaagatacctggttttggttgca 3116330  T
Q  554 gaaaaggaaacatcgt-ttaggactttttgaatcacccctatttataattttgttggata-ataaataaaatccatgtcgcgtttagttatcttaaataa 651  Q
    |||||| ||   | ||   |||| | || ||||| ||||||||||    |||||||||||  ||| ||  || |||||||| | |||||||  ||| | |    
T  3116329 gaaaagtaatagtggtaagaggattcttcgaatc-cccctattta----tttgttggatatttaattagcatacatgtcgcatctagttattataagtga 3116235  T
Q  652 aatatacaagtgatgagactgttgggacg-ttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    | |||  ||||||||||  |  ||||||| ||||||||||||| || |||||| |||||||| |||||||||||||||||||||||| ||||    
T  3116234 actatctaagtgatgag-gtcatgggacgtttctaacctagtcagtcgtcaagttgcacctgctgatcgcacggtgatccttacgtgtgggg 3116144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 346 - 559
Target Start/End: Original strand, 5508321 - 5508529
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||||||| |||||||||||| || ||||| |     |||  |||||||||||||||||||||| || |||||    
T  5508321 tgatggtcgaattaggcaagtgtaccaaatcatttgccaagtaataaagtgataagtgag----tataatatccacatggattgtcgtttcgtccaaaca 5508416  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtta-gagatt-gcaatttttatttgtttgcaacatagcaagttacttgtt 543  Q
      ||| |||| |||||| ||| ||||||||  ||||| ||||| |||| |||| |||||| | ||||||||| ||||||||| | |||||||||| ||||    
T  5508417 tctcgcgttacttattttaaggtgacgata--aaata-aagagataagggttaagagatttgaaatttttatctgtttgcaatagagcaagttacatgtt 5508513  T
Q  544 tttggttgcagaaaag 559  Q
    ||| ||||||||||||    
T  5508514 ttttgttgcagaaaag 5508529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 480 - 742
Target Start/End: Original strand, 19908421 - 19908683
Alignment:
Q  480 atataagagttaagagttaga-gattgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggact 577  Q
    |||||| ||||||| |||| | ||||| ||||||||||| ||||||||| |||||||| || | |||||||||||||||||| || || |  |||||| |    
T  19908421 atataaaagttaagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttggttgcagaaaagtaagcagcagttaggatt 19908520  T
Q  578 ttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggg 677  Q
     || ||||| |   | |||||| |   ||| |||| | ||||| |   |||||||||||| ||||||||  || | |||||||||| |||| ||||||||    
T  19908521 cttcgaatcccatatgtttatact---gtttgatattgaataacagtaatgtcgcgtttatttatcttaggtagactatacaagtgttgaggctgttggg 19908617  T
Q  678 acgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    ||||| |||||||| ||||| |||||| |  || || |||||||||||||||||||||||||||||    
T  19908618 acgtttctaacctaatcggtcgtcaagttatacttgctgatcgcacggtgatccttacgtgcgggg 19908683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 479 - 736
Target Start/End: Complemental strand, 18736657 - 18736405
Alignment:
Q  479 aatataagagttaagagttagagattgc-aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggact 577  Q
    |||| |||||||||| ||||||||||   ||||||||||||||||||||  | |||||||| |||||| ||||||||||||  || || || |||||| |    
T  18736657 aataaaagagttaagggttagagatttttaatttttatttgtttgcaaccgaacaagttacctgtttt-ggttgcagaaaaataagcagcggttaggatt 18736559  T
Q  578 ttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggg 677  Q
     ||| ||| ||||| ||||||    |||||||| | ||||||| || |||||||| |||||||||||||| || | |||  | ||||||||   ||||||    
T  18736558 ctttaaattacccc-atttat----ttgttgga-attaaataatattcatgtcgcatttagttatcttaagtagactatctacgtgatgaggtcgttggg 18736465  T
Q  678 acgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgt 736  Q
    ||||||||||||| |||||| ||  || ||||| ||||||||||||  ||||||||||||    
T  18736464 acgttctaacctaatcggttcgttgagttgcacttgttgatcgcacattgatccttacgt 18736405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 510 - 742
Target Start/End: Original strand, 8143760 - 8143986
Alignment:
Q  510 ttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttgg 609  Q
    |||| ||||||||||||| | |||||||| |||||| ||||||||||| | || || || |||||| | || ||||| |||||||||||    |||||||    
T  8143760 ttttttttgtttgcaacagaacaagttacctgtttt-ggttgcagaaa-gtaagcaacggttaggattcttggaatcccccctatttat----ttgttgg 8143853  T
Q  610 ataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgca 708  Q
    | | ||| |||  | ||||| ||||||| ||||||||| || | |||| ||||||||||   ||||||||||||||| ||||||||||  ||||| ||||    
T  8143854 a-attaagtaacgttcatgttgcgtttatttatcttaagtagactatataagtgatgaggtcgttgggacgttctaagctagtcggttcatcaagttgca 8143952  T
Q  709 cctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    | ||||||||||||| ||||| |||| |||||||    
T  8143953 catgttgatcgcacgatgatctttacatgcgggg 8143986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 346 - 750
Target Start/End: Original strand, 20429695 - 20430082
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| | |||||||||||  ||||||||||||||||||| |||||| ||   ||||||||| | | |||||||| ||||||| | |||    
T  20429695 tgatggtcggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagag---tatcgtatctataaggattgtcatttcatccacaca 20429791  T
Q  446 gttcgtgttattta--tttaaagttgacgatataaaatataagagttaagagttag-agattgcaatttttatttgtttgcaacatagcaagttacttgt 542  Q
     |||| |||| |||  |||||  ||||||||||  |||| ||||| |||| ||||| || ||||||||||||| ||||||||||| ||||||||  |       
T  20429792 attcgcgttacttatttttaagtttgacgatat--aataaaagag-taagggttagaagtttgcaatttttatatgtttgcaacagagcaagtttatcta 20429888  T
Q  543 ttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcg-cgtttagtta 641  Q
    ||||||||||||||||| || ||  | ||||| ||            ||||||||||   |||||||||| ||||||| |   |||||| |||||| |||    
T  20429889 ttttggttgcagaaaagtaatcagtggttaggcct------------cctatttata---ttgttggatattaaataataggaatgtcgtcgtttattta 20429973  T
Q  642 tcttaaataaaatatacaagtgatgagactgttgggacgt-tctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcgg 740  Q
    |||||| || | ||||||||||||||| | ||| |||| |  |||||||| | |||||  ||| |||||||||||||| ||||||||||||||| || ||    
T  20429974 tcttaagtagactatacaagtgatgaggccgttaggacctgactaacctaataggttg-gaagatgcacctgttgatcacacggtgatccttacatgtgg 20430072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 348 - 455
Target Start/End: Original strand, 10923134 - 10923238
Alignment:
Q  348 atggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagt 447  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||| || ||| || ||   ||||||||||||  ||||||| ||||||||||||||||    
T  10923134 atggtcaaattaggttagtgtaccaaatcatttaccaagtaataaagtgataattacag---tatcgtatccacgaggattgttgtttcatctaaacagt 10923230  T
Q  448 tcgtgtta 455  Q
    ||| ||||    
T  10923231 tcgcgtta 10923238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 373 - 668
Target Start/End: Original strand, 4650243 - 4650528
Alignment:
Q  373 aatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacg 472  Q
    ||||||||||||||||||||| || | |||||||   ||||||||||||| |||||||| ||||  | ||||| |||| |||| |||||  |||||||||    
T  4650243 aatcatttaccaagtaataaagtgatgagtaaag---tatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt--aagttgacg 4650337  T
Q  473 atataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgttt 571  Q
    ||| ||||  |||| ||||| |   |||  ||||||||||||| ||||||||||  |||||| |||| || ||||||||||||||||| || || || ||    
T  4650338 atacaaaagttaagggttaaaa---aga-cttgcaatttttatctgtttgcaacggagcaagtttacctg-ttttggttgcagaaaagtaagcaacggtt 4650432  T
Q  572 aggactttttgaatcacccctatttataat-tttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgag 668  Q
    |||| | || ||||  ||||||| |||| |  ||||||||| |||| ||||||  |||||||||| | ||||||||  || | ||||| |||||||||    
T  4650433 aggattcttcgaat--cccctatgtatattcattgttggattataagtaaaatatatgtcgcgttaatttatcttaggtagactatacgagtgatgag 4650528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 672 - 755
Target Start/End: Complemental strand, 12373757 - 12373674
Alignment:
Q  672 gttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctc 755  Q
    ||||||||||||||||||| |||| | |||||||||||||| |||| |||| ||||| ||||||||| |||| |||||||||||    
T  12373757 gttgggacgttctaacctaatcggctatcaagctgcacctgctgattgcactgtgattcttacgtgctgggtctatactatctc 12373674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 356 - 450
Target Start/End: Original strand, 10917913 - 10918004
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcg 450  Q
    |||||| |||||||| ||||| |||||||| ||||||| || |||||| ||||   ||||||||||||||||||| ||||| |||||||||||||    
T  10917913 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagta---tcgtatccacatggattgttgtttcgtctaaacagttcg 10918004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 678
Target Start/End: Complemental strand, 12754881 - 12754709
Alignment:
Q  506 caatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttata-attt 603  Q
    |||||||||||||||||||||| ||| |||| || || ||||||||||||||||| || || || |||||| | || |||||  ||||   |||| |  |    
T  12754881 caatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatc--cccttggtatatacgt 12754784  T
Q  604 tgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggga 678  Q
    ||||||||||||||||| ||  |||||||||||| ||||||||  || | ||||||||||||||| | |||||||    
T  12754783 tgttggataataaataatataaatgtcgcgtttatttatcttaggtagactatacaagtgatgagtccgttggga 12754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 379 - 681
Target Start/End: Complemental strand, 17438512 - 17438216
Alignment:
Q  379 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt----aaagttgacgat 474  Q
    ||||||||| |||||||| |||||| ||||   || |||||||||||||||||||||| || ||||| |||  |||| ||||||    ||  ||||||||    
T  17438512 ttaccaagttataaaatgataagtagagta---tcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgat 17438416  T
Q  475 ataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaa-gttacttgtttttggttgcagaaaaggaaacatcgtttag 573  Q
    |||| | ||||  ||| |||     || ||||||||||||| ||||||||||| |||||  |||| || ||||||||||||||||| || || || ||||    
T  17438415 ataataaataaaggtttagaa----agcttgcaatttttatctgtttgcaacagagcaattttacctg-ttttggttgcagaaaagtaagcaacggttag 17438321  T
Q  574 gactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgt 673  Q
    || | || ||||| || |||||||||   ||||| |||| |||||||    ||||||||||||| ||||||||  || | ||| |||||||||||   ||    
T  17438320 gattcttcgaatcccctctatttata---ttgttcgatattaaataacggtcatgtcgcgtttatttatcttaggtagactatgcaagtgatgaggtcgt 17438224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 379 - 743
Target Start/End: Complemental strand, 2167698 - 2167342
Alignment:
Q  379 ttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagtt-gacgatata 477  Q
    ||||||||||||||| || |||||| ||||   ||||||||||||  | ||||||||| || ||||| |||   ||| ||||||  |||| |||  ||||    
T  2167698 ttaccaagtaataaagtgataagtagagta---tcgtatccacataaaatgtcgtttcgtccaaacaattcacattacttatttttagtttgac--tata 2167604  T
Q  478 aaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggac 576  Q
    ||||| |||||| ||  |||||||||| ||||||||||| ||||||||||||| |||||||| || |||||||||  |||||| ||  |  | ||||||     
T  2167603 aaataaaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaagttacctg-ttttggttgtggaaaagtaagaagtggttaggat 2167505  T
Q  577 tttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgg 676  Q
    | || ||||| ||||||||||||   |||||||||| ||||||| |   ||||| |||| | |||| |||  || |  |||||||||||||| | |||||    
T  2167504 tcttcgaatc-cccctatttata---ttgttggatattaaataacagtaatgtctcgttcatttattttaggtagaccatacaagtgatgagtc-gttgg 2167410  T
Q  677 gacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||| ||||| || | | | |||||||||||| || || || ||| ||||||||||| || |||||    
T  2167409 gacgttactaacttaatggatcgtcaagctgcacttgctggtcacacagtgatccttacatgtggggt 2167342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 4650622 - 4650661
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4650622 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 4650661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 462
Target Start/End: Complemental strand, 821602 - 821515
Alignment:
Q  372 aaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    ||||| |||||||||||||||| || |||||| ||||   ||||||||||||||||| ||||||| | |||||| ||| ||||| ||||||    
T  821602 aaatcgtttaccaagtaataaagtgataagtagagta---tcgtatccacatggattttcgtttcgtgtaaacaattcatgttacttattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 668
Target Start/End: Complemental strand, 19171790 - 19171662
Alignment:
Q  540 tgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagt 639  Q
    ||||||| |||||||||||| |  ||  | |||||| | || ||||||||||||||||| || |||||||||| ||||||| |  ||| || |||||| |    
T  19171790 tgttttttgttgcagaaaagtatgcagtggttaggattcttcgaatcacccctatttattatattgttggatattaaataacaatcatttcacgtttatt 19171691  T
Q  640 tatcttaaataaaatatacaagtgatgag 668  Q
    |||||||  || | |||||||||||||||    
T  19171690 tatcttaggtagactatacaagtgatgag 19171662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 377 - 462
Target Start/End: Complemental strand, 8557212 - 8557130
Alignment:
Q  377 atttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    ||||||| ||||||||| || |||||| ||||   ||||||||||||||||||||||||||| |||||| || | |||| ||||||    
T  8557212 atttaccgagtaataaagtgataagtagagta---tcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Original strand, 932884 - 932937
Alignment:
Q  506 caatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  932884 caatttttatttgtttgcaacagagcaagtttacttg-ttttggttgcagaaaag 932937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 8170013 - 8170066
Alignment:
Q  507 aatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 559  Q
    ||||||||| ||||||||||||||| || |||| ||||||||||||||||||||    
T  8170013 aatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaag 8170066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 346 - 557
Target Start/End: Original strand, 10744887 - 10745093
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||| ||| |||||| |||| ||| ||||| |||||||||||||||| || |||||| ||||   |||| |||| | ||||||||||||| ||||||||    
T  10744887 tgatgatcaaattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagta---tcgtttccatagggattgtcgtttcgtctaaaca 10744983  T
Q  446 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtt 543  Q
      ||   ||| |||||| ||    || | || | |||| ||||||| || || ||||||| ||||||||||| | ||||||||| |||||||||| || |    
T  10744984 aatcacattaattattttaaa---acaaaattataataaaagagttgagggtaagagatttgcaatttttatctatttgcaacagagcaagttacctg-t 10745079  T
Q  544 tttggttgcagaaa 557  Q
    ||||||||||||||    
T  10745080 tttggttgcagaaa 10745093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 704 - 737
Target Start/End: Original strand, 19167794 - 19167827
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtg 737  Q
    ||||||||||||||||||||||||||||||||||    
T  19167794 ctgcacctgttgatcgcacggtgatccttacgtg 19167827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 346 - 436
Target Start/End: Original strand, 12411136 - 12411223
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 436  Q
    ||||||||  || ||| |||||||| |||||| ||||||||||||||| || | |||| ||   ||||||||||||| |||||||||||||    
T  12411136 tgatggtcggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagag---tatcgtatccacaaggattgtcgtttc 12411223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 538
Target Start/End: Original strand, 8445932 - 8445995
Alignment:
Q  475 ataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 538  Q
    |||||||| |||||||  | |||||||||||||||||||||  |||||||||| | ||||||||    
T  8445932 ataaaataaaagagtttggggttagagattgcaatttttatcagtttgcaacagaacaagttac 8445995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 667
Target Start/End: Complemental strand, 7495043 - 7494915
Alignment:
Q  535 ttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgt 634  Q
    |||| |||||||||||| ||||||| || ||  | |||||| | || ||||| || |||||||||   ||||||||||| |||||| |  ||||||||||    
T  7495043 ttacctgtttttggttgtagaaaagtaagcagggattaggattattcgaatcccctctatttata---ttgttggataa-aaataacagtcatgtcgcgt 7494948  T
Q  635 ttagttatcttaaataaaatatacaagtgatga 667  Q
    ||| ||||||||  || | ||||||||||||||    
T  7494947 ttatttatcttaggtagactatacaagtgatga 7494915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 8765244 - 8765300
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||| |||||| |||| || |||||||||||||||||    
T  8765244 ttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaag 8765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 8770146 - 8770202
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||| |||||| |||| || |||||||||||||||||    
T  8770146 ttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaag 8770202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 16229915 - 16229858
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||| ||| || |||| |||||||||||||| |||||    
T  16229915 ttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaag 16229858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 455
Target Start/End: Original strand, 28728955 - 28729035
Alignment:
Q  372 aaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||| ||||| ||||||||||| || |||||| ||||   |||||||||||| ||||||||||||| | ||||| |||| ||||    
T  28728955 aaataatttatcaagtaataaagtgataagtagagta---tcgtatccacatagattgtcgtttcaaccaaacaattcgcgtta 28729035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 410 - 742
Target Start/End: Complemental strand, 2871 - 2543
Alignment:
Q  410 tatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaa 508  Q
    ||||||||||||||| ||||||||||| || ||||| ||||||||| ||||||    ||||| |||||| |||| |||||||||| ||||||||||||||    
T  2871 tatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacaatataataataaaagagttaagggttagagattgcaa 2772  T
Q  509 tttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttg 608  Q
    ||||||||| |||||||||||||||||||| || |||  |||| ||||||| ||||| || ||| |||| || |||||  ||||||||   |||||||||    
T  2771 tttttatttatttgcaacatagcaagttacatggttt--gttgtagaaaagtaaacaacggttaagactcttcgaatcctccctattt---attttgttg 2677  T
Q  609 gataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgc 707  Q
    || | ||||||| || || |||||||||||||||||| | || | | ||||| ||||||| | ||| ||||||||||||||||| ||||  ||||| |||    
T  2676 ga-attaaataacattcaggtcgcgtttagttatctttagtagactgtacaaatgatgaggccgttaggacgttctaacctagttggttcatcaagttgc 2578  T
Q  708 acctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    ||||| |||||||  ||||||||||||||||||||    
T  2577 acctgctgatcgcctggtgatccttacgtgcgggg 2543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 2e-54; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 363 - 783
Target Start/End: Original strand, 34487640 - 34488047
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||  |||||||||||||||| ||| ||||| | ||   || |||||||||||||||||||||| |||||||| |||| |||| ||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtgt-aagtagaata---tcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattt 34487735  T
Q  463 aaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaagga 561  Q
        |||||||||||| |||| || || |||| ||||||||||||||||||||| ||||| ||||| ||||| |||| |||||  |||||||||||||      
T  34487736 tgttttgacgatataataataaaaaagataagggttagagattgcaatttttatctgttttcaacagagcaatttacatgttt--ggttgcagaaaagtt 34487833  T
Q  562 aacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaag 661  Q
    |     | |||||||| || ||||| ||||||| |||   ||||| ||| | ||||||| || ||||| || |||||||||||||| || | ||| ||||    
T  34487834 agt---ggttaggactcttagaatc-cccctatctat---tttgtcgga-attaaataacattcatgttgcttttagttatcttaagtagactattcaag 34487925  T
Q  662 tgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactga 761  Q
    ||||| | | ||||| ||||||||| |||||||||||||||||| |||||| || ||||||| |||||||||||| |||||| ||||||||||||  |||    
T  34487926 tgatggggccgttggaacgttctaatctagtcggttgtcaagctacacctgctgttcgcacgatgatccttacgtacggggtctatactatctcggttga 34488025  T
Q  762 tctaggtctatccctctgatgg 783  Q
    ||| |||||||||||| |||||    
T  34488026 tcttggtctatccctccgatgg 34488047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 346 - 755
Target Start/End: Original strand, 22755506 - 22755908
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||  ||||||||  |||| ||||||||||||| ||  | |||||| ||||   ||||||||| | ||||||||||||| || |||||    
T  22755506 tgatggtcggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagta---tcgtatccataaggattgtcgtttcttccaaaca 22755602  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattg-caatttttatttgtttgcaacatagcaagttacttgttt 544  Q
     || |  |||||||||| |  || ||||||||||||| |||||||||| ||||||||||  |||||||||| ||||||||||| ||||||||||| ||||    
T  22755603 attggcattatttattttagttttacgatataaaataaaagagttaagggttagagatttacaatttttatctgtttgcaacagagcaagttactagttt 22755702  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    | |||| || ||||| || || || ||| || | || ||||  |||||||||||    || ||||||| ||||||| || ||||||  ||||| ||||||    
T  22755703 t-ggttccaaaaaagtaatcaacgattatgattcttagaattccccctatttat----ttcttggatattaaataacattcatgtcatgtttatttatct 22755797  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtg 744  Q
    ||| || | |||||||||||||||   ||||| ||||| ||||||| || |||||||||||||| ||  |||| ||||||||||||||||||| |||||     
T  22755798 taagtagactatacaagtgatgaggtcgttggaacgttttaacctaatcagttgtcaagctgcatctactgattgcacggtgatccttacgtgtggggtc 22755897  T
Q  745 tatactatctc 755  Q
    |||||||||||    
T  22755898 tatactatctc 22755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 495 - 789
Target Start/End: Complemental strand, 24265443 - 24265150
Alignment:
Q  495 gttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctat 594  Q
    |||||| |||||||||||||| ||||||||| | |||||||||| | | ||| |||||||||||| || || || |||||||| |||||||  |||||||    
T  24265443 gttagatattgcaatttttatctgtttgcaataaagcaagttacct-tatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctat 24265345  T
Q  595 ttataattttgttggataataaataaaatccatgtcgcgtttagttatc----ttaaataaaatatacaagtgatgagactgttgggacgttctaaccta 690  Q
    |||    ||||||||||  ||||||| |  |||||| | | |||| |||    |||| || | |||||||||||||||   ||| |||||||||||||||    
T  24265344 ttac---tttgttggatt-taaataacagtcatgtcacatatagtaatcaatcttaagtagactatacaagtgatgaggtcgtttggacgttctaaccta 24265249  T
Q  691 gtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    |||||||||||| |||||| || |||| ||||||||||||||||||||||| | |||||||||||   ||||||| ||||||||||||||||| |||||    
T  24265248 gtcggttgtcaacctgcacatgctgattgcacggtgatccttacgtgcgggttctatactatctcagttgatctatgtctatccctctgatggctaact 24265150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 495 - 789
Target Start/End: Complemental strand, 24342074 - 24341781
Alignment:
Q  495 gttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctat 594  Q
    |||||| |||||||||||||| ||||||||| | |||||||||| | | ||| |||||||||||| || || || |||||||| |||||||  |||||||    
T  24342074 gttagatattgcaatttttatctgtttgcaataaagcaagttacct-tatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctat 24341976  T
Q  595 ttataattttgttggataataaataaaatccatgtcgcgtttagttatc----ttaaataaaatatacaagtgatgagactgttgggacgttctaaccta 690  Q
    |||    ||||||||||  ||||||| |  |||||| | | |||| |||    |||| || | |||||||||||||||   ||| |||||||||||||||    
T  24341975 ttac---tttgttggatt-taaataacagtcatgtcacatatagtaatcaatcttaagtagactatacaagtgatgaggtcgtttggacgttctaaccta 24341880  T
Q  691 gtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctctgatgggtaact 789  Q
    |||||||||||| |||||| || |||| ||||||||||||||||||||||| | |||||||||||   ||||||| ||||||||||||||||| |||||    
T  24341879 gtcggttgtcaacctgcacatgctgattgcacggtgatccttacgtgcgggttctatactatctcagttgatctatgtctatccctctgatggctaact 24341781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 346 - 738
Target Start/End: Complemental strand, 24267068 - 24266687
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||| || |||  || |||||    
T  24267068 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattatcattttgtccaaaca 24266973  T
Q  446 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
     ||||||||| ||||||    |||||||||||| |||| |||||||||| |||||| |||||||||||||| |||||| |||| ||||||  || ||  |    
T  24266972 attcgtgttacttattttgttttgacgatataataataaaagagttaagggttagatattgcaatttttatctgtttgtaacaaagcaag--acctg--t 24266877  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    |||||| ||| |||| || || || |||||||| || |||||  ||||||||   |||||| |||| | ||||| | || ||||||  ||||||||||||    
T  24266876 ttggttacag-aaagtaagcagcggttaggactcttcgaatcctccctattt---attttgatgga-attaaatgacattcatgtcatgtttagttatct 24266782  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtgc 738  Q
    ||| || | |||| |||||||||| | |||||||||||||||| ||||| ||| |||||| ||||  | ||||||||||| |||||| |||||||    
T  24266781 taagtagactatataagtgatgaggccgttgggacgttctaacttagtcagttcgtcaagttgcatttattgatcgcacgatgatccctacgtgc 24266687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 346 - 738
Target Start/End: Complemental strand, 24343699 - 24343318
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||| |||||||||||||||| ||| ||||| ||||   ||||||||||| ||||| || |||  || |||||    
T  24343699 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtgt-aagtagagta---tcgtatccacaaggattatcattttgtccaaaca 24343604  T
Q  446 gttcgtgttatttatttaaagttgacgatataa-aatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
     ||||||||| ||||||    |||||||||||| |||| |||||||||| |||||| |||||||||||||| |||||| |||| ||||||  || ||  |    
T  24343603 attcgtgttacttattttgttttgacgatataataataaaagagttaagggttagatattgcaatttttatctgtttgtaacaaagcaag--acctg--t 24343508  T
Q  545 ttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatct 644  Q
    |||||| ||| |||| || || || |||||||| || |||||  ||||||||   |||||| |||| | ||||| | || ||||||  ||||||||||||    
T  24343507 ttggttacag-aaagtaagcagcggttaggactcttcgaatcctccctattt---attttgatgga-attaaatgacattcatgtcatgtttagttatct 24343413  T
Q  645 taaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtgc 738  Q
    ||| || | |||| |||||||||| | |||||||||||||||| ||||| ||| |||||| ||||  | ||||||||||| |||||| |||||||    
T  24343412 taagtagactatataagtgatgaggccgttgggacgttctaacttagtcagttcgtcaagttgcatttattgatcgcacgatgatccctacgtgc 24343318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 346 - 559
Target Start/End: Complemental strand, 18208362 - 18208155
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| |||||||| ||||| ||||| |||||||||| ||| ||||| ||||   |||||||||||||||||||| |||| || |||||    
T  18208362 tgatggtcggattaggcaagtgtaccaaatcgtttacaaagtaataaagtgt-aagtagagta---tcgtatccacatggattgtcctttcgtccaaaca 18208267  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttt 545  Q
     ||| ||||| ||||||    |||| ||||||||||| |||||||||| ||| ||| ||||||||||||| ||||||||  | |||||||||| ||  ||    
T  18208266 attcatgttacttattttgttttgatgatataaaataaaagagttaagggttggaggttgcaatttttatctgtttgcagtagagcaagttacctg--tt 18208169  T
Q  546 tggttgcagaaaag 559  Q
    ||||||||||||||    
T  18208168 tggttgcagaaaag 18208155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 337 - 557
Target Start/End: Original strand, 18937724 - 18937940
Alignment:
Q  337 ttgacataatgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 436  Q
    |||| ||| ||||||||  |||||| |||||||| ||||| ||||  |||||||||| || |||||||     |||||||| || | ||||||| |||||    
T  18937724 ttgagatattgatggtcggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagtaag----tatcgtattcagagggattgttgtttc 18937819  T
Q  437 atctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagtt-agagattgcaatttttatttgtttgcaacatagcaagt 535  Q
     || ||||| |||  |||| |||||| ||||| | ||||||||||| |||||||||| ||| ||||||| |||||||||| ||||||||||| |||||||    
T  18937820 gtccaaacaattcacgttacttattttaagttaatgatataaaata-aagagttaagggttgagagatttcaatttttatctgtttgcaacagagcaagt 18937918  T
Q  536 tacttgtttttggttgcagaaa 557  Q
    ||| ||||||||||||||||||    
T  18937919 tacatgtttttggttgcagaaa 18937940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 480 - 742
Target Start/End: Complemental strand, 20744654 - 20744394
Alignment:
Q  480 atataagagttaagagttagaga-ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaaggaaacatcgtttaggact 577  Q
    |||||| ||||||| |||||||| ||||||||||||| |||||||||||||||||| |||| || ||||||||| ||||||| || || || |||||| |    
T  20744654 atataaaagttaagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacctg-ttttggttgtagaaaagtaagcagcggttaggatt 20744556  T
Q  578 ttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggg 677  Q
     || ||||| | ||| ||||||   ||||| |||| ||||||| ||   |||||| |||| ||||||||  || | ||||||||||||||| | ||||||    
T  20744555 cttcgaatcccacctgtttata---ttgtttgatattaaataacat-attgtcgcttttatttatcttaggtagattatacaagtgatgaggccgttggg 20744460  T
Q  678 ac-gttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    ||  ||||||||||||  || |||||| |||||||  |||||||||| ||||||| | ||||||||    
T  20744459 acacttctaacctagtatgtcgtcaagttgcaccttctgatcgcacgatgatcctgatgtgcgggg 20744394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 356 - 538
Target Start/End: Complemental strand, 17171657 - 17171479
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    ||||||||||||||| ||||| |||| ||||||||||| || |||||| || |   ||||||||||||||||||||||||| ||||| || |||| ||||    
T  17171657 attaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagca---tcgtatccacatggattgtcgtttcgtctaagcaattcgcgtta 17171561  T
Q  456 tttatttaaagttgacgatata--aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttac 538  Q
     |||||| ||    || | |||  ||||| ||||||| || ||||||||||||||||||||| |  |||||||| ||||||||||    
T  17171560 attattttaa---aacaaaataataaataaaagagttgagggttagagattgcaatttttatctagttgcaacagagcaagttac 17171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 737
Target Start/End: Original strand, 15690773 - 15691145
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    ||||||||||| ||| ||||| |||||||| ||||||| || |||||| ||||   ||||||||||  | ||||||||||| || || || |||  ||||    
T  15690773 attaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagta---tcgtatccacgagaattgtcgtttcgtccaaccaattctcgtta 15690868  T
Q  456 tttatttaaagttgacgatataaaatataagagttaa-gagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgca 553  Q
     ||||||  ||||||| | ||||| || ||||||||| | |||||||||| |||||||||||||||| | |||| ||||| |||| || |||||||||||    
T  15690869 cttatttttagttgacaa-ataaa-taaaagagttaaagggttagagatttgcaatttttatttgttcgtaacagagcaaattacctg-ttttggttgca 15690965  T
Q  554 gaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaa 653  Q
    |||||| || ||  | |||||| | || ||||| |||||||||   ||| ||||||||| ||||||| |  ||||||||| |||  |||  ||  ||||     
T  15690966 gaaaagtaagcagtg-ttaggattcttcgaatc-cccctattt---attatgttggatattaaataacagtcatgtcgcgattatctattctaggtaaac 15691060  T
Q  654 tatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtg 737  Q
    |||| || |||||||   ||||||||||| | |||||||  ||| ||||| ||||||||| ||||| || |||||||||||||||    
T  15691061 tatataaatgatgaggtcgttgggacgttaccaacctagctggtcgtcaaactgcacctgctgatcacagggtgatccttacgtg 15691145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 346 - 544
Target Start/End: Complemental strand, 19283969 - 19283774
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    ||||||||  |||||| ||||| |||||||| |||||||| ||||||| || |||||| |||| |   ||||||||| | |||  |||||| || |||||    
T  19283969 tgatggtcggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtatt---gtatccacaagaattaacgtttcgtccaaaca 19283873  T
Q  446 gttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
     || |  | | |||||| |||||||||||||||| || |||||||||| |||||||||| ||||||| || | ||||||| | || ||||||| |||||    
T  19283872 atttgcttaacttattttaagttgacgatataaagtaaaagagttaagggttagagattacaattttaatctatttgcaatagagaaagttacctgttt 19283774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 545
Target Start/End: Complemental strand, 24662214 - 24662094
Alignment:
Q  425 gattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgca 524  Q
    |||||| |||||  ||||||| |||  |||| |||||| |  || ||||||||||||| |||||||||| ||||| |||| ||||||||| ||||||| |    
T  24662214 gattgttgtttcgcctaaacaattcacgttacttattttagtttaacgatataaaataaaagagttaagggttagcgatttcaatttttagttgtttgaa 24662115  T
Q  525 acatagcaagttacttgtttt 545  Q
    ||| |||||||||||||||||    
T  24662114 acagagcaagttacttgtttt 24662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 475 - 754
Target Start/End: Complemental strand, 25402326 - 25402051
Alignment:
Q  475 ataaaatataagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttag 573  Q
    |||||||| |||||| ||| |||||||||| ||||||||||| |||||| || | ||  |||| | | ||| |||||||||||||| |  || | | |||    
T  25402326 ataaaataaaagagtgaagggttagagatttgcaatttttatctgtttgtaatagaggtagtttcctatttctggttgcagaaaagtacgcaacatgtag 25402227  T
Q  574 gactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgt 673  Q
    || |||| ||||  ||| ||||||||   |||||||||| ||||||  |   ||||| | |||| | ||||||  || | |||||||||||||||   ||    
T  25402226 gatttttcgaatgccccttatttata---ttgttggatattaaatagtagtaatgtcacctttattaatcttaggtagactatacaagtgatgaggtcgt 25402130  T
Q  674 tgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggtgtatactatct 754  Q
    ||||||||| |||||||||||| |  |||| ||||||||| ||||   ||||||||||||||||| ||||| ||||||||||    
T  25402129 tgggacgttactaacctagtcgatcatcaatctgcacctgctgat---acggtgatccttacgtgtggggtctatactatct 25402051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 356 - 462
Target Start/End: Complemental strand, 24852276 - 24852173
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||| |||||||||  |||||||||||||||||| |||||| ||||   ||||||||||||||||||| ||||| |||||||| |||  ||||    
T  24852276 attaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagta---tcgtatccacatggattgttgtttcgtctaaacaattcacgtta 24852180  T
Q  456 tttattt 462  Q
     ||||||    
T  24852179 cttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 36175247 - 36175327
Alignment:
Q  478 aaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    ||||| ||||||| || ||||||||||||||||||||| ||||| ||||| |||||||||| || ||||||||| |||||||    
T  36175247 aaataaaagagttgagggttagagattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaag 36175327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 20564053 - 20563996
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagtt-acttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||    
T  20564053 ttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaag 20563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 17185465 - 17185536
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 437  Q
    ||||||||||||||||||||||| ||||||| || |||||| ||   ||||||||| ||| ||||||||||||||    
T  17185465 aagtgtactaaatcatttaccaaataataaagtgataagtagag---tatcgtatctacagggattgtcgtttca 17185536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 17431885 - 17431964
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||||||||||||| |||||||||||||||| ||  ||||| ||   |||||||||||||  ||||||||||||||| |||||    
T  17431885 aagtgtactaaatcgtttaccaagtaataaagtggaaagtagag---tatcgtatccacagagattgtcgtttcatccaaaca 17431964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 15375636 - 15375597
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  15375636 ctgcacctgatgatcgcacggtgatccttacgtgcggggt 15375597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 678
Target Start/End: Complemental strand, 23388719 - 23388644
Alignment:
Q  603 ttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggga 678  Q
    |||||||||||||||||| ||  |||||||||||| ||||||||  || | ||||||||||||||| | |||||||    
T  23388719 ttgttggataataaataatataaatgtcgcgtttatttatcttaggtagactatacaagtgatgaggccgttggga 23388644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 24659729 - 24659690
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  24659729 ctgcacctgatgatcgcacggtgatccttacgtgcggggt 24659690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 356 - 478
Target Start/End: Complemental strand, 25550608 - 25550487
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| |||||||  ||||| |||||||||||||||| || |||||| ||   |||| |||||||| |||||||| |||| || ||||| ||| |||||    
T  25550608 attaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagag---tatcatatccacagggattgtcatttcgtccaaacaattcttgtta 25550512  T
Q  456 tttattt--aaagttgacgatataa 478  Q
     ||||||   |||||||||||||||    
T  25550511 cttattttgtaagttgacgatataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 19004323 - 19004258
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtc 431  Q
    |||||||||||||| |||||||||||||||| || |||||   | | ||||||||||||||||||||||    
T  19004323 aagtgtactaaatcgtttaccaagtaataaagtgataagt---ggagtatcgtatccacatggattgtc 19004258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 24260635 - 24260708
Alignment:
Q  484 aagagttaagagttagagatt-gcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    ||||||| || |||||||||| ||||||||||| ||||||||||| |||||||||| |  |||||||||||||||    
T  24260635 aagagttgagggttagagatttgcaatttttatctgtttgcaacagagcaagttacct-attttggttgcagaaa 24260708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 500 - 536
Target Start/End: Complemental strand, 15375859 - 15375823
Alignment:
Q  500 agattgcaatttttatttgtttgcaacatagcaagtt 536  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15375859 agattgcaatttttatttgtttgcaacagagcaagtt 15375823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 603 - 690
Target Start/End: Complemental strand, 24659844 - 24659756
Alignment:
Q  603 ttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaaccta 690  Q
    |||||||||||||| ||| ||  |||||||||||| ||||||||  || | |||||||||||||||   ||||||||||| ||||||||    
T  24659844 ttgttggataataagtaatataaatgtcgcgtttatttatcttatgtagactatacaagtgatgaggtcgttgggacgttactaaccta 24659756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 15375979 - 15375909
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttc 436  Q
    |||||||| ||||| |||||||| |||||||||| |||||| ||||   || |||||||| |||||||||||||    
T  15375979 aagtgtaccaaatcgtttaccaaataataaaatgataagtagagta---tcctatccacagggattgtcgtttc 15375909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 19008259 - 19008220
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  19008259 ctgcacctgctgatcggacggtgatccttacgtgcggggt 19008220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 20563832 - 20563793
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  20563832 ctgcacctgttgatcgtacggtgatccttacgtgtggggt 20563793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 445
Target Start/End: Complemental strand, 24167688 - 24167602
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||||||||||||| |||||| |||||||||||||||| |  |||||| ||   |||| |||  ||||||||||||||||| || |||||    
T  24167688 attaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagag---tatcatatatacatggattgtcgtttcttccaaaca 24167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 614 - 743
Target Start/End: Complemental strand, 17474501 - 17474371
Alignment:
Q  614 taaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggtt-gtcaagctgcacctg 712  Q
    ||||||| | ||| |||||||| ||||||  ||| || | |||  |||||||||| | || |||||||  ||||||| ||| || |||||| ||||||||    
T  17474501 taaataacagccaagtcgcgttcagttattctaagtagattatctaagtgatgagtccgtcgggacgtgataacctaatcgatttgtcaagttgcacctg 17474402  T
Q  713 ttgatcgcacggtgatccttacgtgcggggt 743  Q
     |||||| ||||||||||||| |||| ||||    
T  17474401 ctgatcgtacggtgatccttatgtgcagggt 17474371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 355 - 393
Target Start/End: Original strand, 20419950 - 20419988
Alignment:
Q  355 cattaggtaagtgtactaaatcatttaccaagtaataaa 393  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  20419950 cattaggtaagtgtaccaaatcgtttaccaagtaataaa 20419988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 23380360 - 23380283
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 437  Q
    ||||| |||||||| ||||  |||||||||||||||| || |||||||   |||||||||| || |||||||||| |||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaa---actatcgtattcatatggattgtcatttca 23380283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 702 - 743
Target Start/End: Complemental strand, 17314815 - 17314774
Alignment:
Q  702 agctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||||| |||||||||| |||||||||| ||||||||    
T  17314815 agctgcacctgctgatcgcacgatgatccttacatgcggggt 17314774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 701 - 742
Target Start/End: Original strand, 19051749 - 19051790
Alignment:
Q  701 aagctgcacctgttgatcgcacggtgatccttacgtgcgggg 742  Q
    ||||||||| || |||||||||||||||||||||||| ||||    
T  19051749 aagctgcacatgctgatcgcacggtgatccttacgtgtgggg 19051790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 435
Target Start/End: Complemental strand, 19086283 - 19086207
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgttt 435  Q
    ||||| ||||||||| ||||| |||||||||||||||| || |||||| |||| ||   |||||||||| ||||| ||||    
T  19086283 attagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatta---tatccacatgaattgttgttt 19086207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 743
Target Start/End: Complemental strand, 24167395 - 24167310
Alignment:
Q  659 aagtgatgagactgttgggacgttctaacctagtcgg-ttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    |||||||||| ||||||||||||  ||||||| |||| |||||||| |||| |||||  ||| | | ||||||||| |||||||||    
T  24167395 aagtgatgagtctgttgggacgtagtaacctaatcggtttgtcaagttgcaactgttagtcgtatgttgatccttatgtgcggggt 24167310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 356 - 646
Target Start/End: Complemental strand, 36099 - 35815
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| ||| |||||||||||||||| |||||||||| || |||||| ||||   ||||||||||||| |||||||||||||| ||| | |||||||||    
T  36099 attaggaaagcgtactaaatcatttactaagtaataaagtgataagtagagta---tcgtatccacatgaattgtcgtttcatccaaataattcgtgtta 36003  T
Q  456 tttatttaaag-ttgacgatataaaatataagagtt-aagagttagaga-ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgc 552  Q
     |||||| ||| ||||||  |||||||||||||||| ||| |||||||| ||||||||||||| | |||| |||| || ||||||| || ||||||||||    
T  36002 cttattttaagtttgacg--ataaaatataagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagttacctgattttggttgc 35905  T
Q  553 agaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatctta 646  Q
    ||||||| || || || |||||| | || ||||| ||||||||||||   |||||||||| ||||||| |   ||||| |||||| ||||||||    
T  35904 agaaaagtaagcagcggttaggattcttagaatc-cccctatttata---ttgttggatattaaataacaataatgtcacgtttatttatctta 35815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 414 - 777
Target Start/End: Original strand, 35587 - 35946
Alignment:
Q  414 gtatccacatggattgtcgtttcatctaaacagttcgtgttatttatttaaagttgacgat-ataaaatataagagttaa-gagttagagatt-gcaatt 510  Q
    ||||||||||||||| ||||||| || ||||| ||||  ||| |||||| |||||   ||| |||||||| ||||||||| | |||||||||| ||||||    
T  35587 gtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagttt--gatgataaaataaaagagttaaagggttagagatttgcaatt 35684  T
Q  511 tttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccctatttataattttgttgga 610  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||| | || || || ||| || | ||  |||| ||  ||||||    |||||||||    
T  35685 tttatttgtctgcaacaaagcaagttacctg-ttttggttgcagaaaggtaagcagcggttaagattcttcaaatcccctatattta----tttgttgga 35779  T
Q  611 taataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcac 709  Q
    || |||||||||   || ||||||||| ||||||||  || | |||||||||||| || |  |||||||||| |||||||| |   |  |||||||||||    
T  35780 tattaaataaaagtaatatcgcgtttatttatcttaggtagactatacaagtgattaggccattgggacgttactaacctaattaatcatcaagctgcac 35879  T
Q  710 ctgttgatcgcacggtgatccttacgtgcggggtgtatactatctcgactgatctaggtctatccctc 777  Q
    ||||||||||||   ||||||||| ||||||||| |||||||||||   ||| |||||||||||||||    
T  35880 ctgttgatcgcataatgatccttatgtgcggggtctatactatctcagttga-ctaggtctatccctc 35946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 484 - 739
Target Start/End: Complemental strand, 89833 - 89583
Alignment:
Q  484 aagagttaagagttagagattgc-aatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttg 582  Q
    |||||||||| ||||||||||   ||||| ||| ||||||||||  | |||||||| |||||| ||||||||||||  || || || |||||||| |||     
T  89833 aagagttaagggttagagatttttaatttctatctgtttgcaaccgaacaagttacctgtttt-ggttgcagaaaaataagcagcggttaggactcttta 89735  T
Q  583 aatcacccctatttataattttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt 682  Q
    ||||||||| ||||||    |||||||| | ||||||| || |||||||| |||||||||||||| || | |||  ||||||||||   |||||||||||    
T  89734 aatcacccc-atttat----ttgttgga-attaaataacattcatgtcgcatttagttatcttaagtagactatctaagtgatgaggtcgttgggacgtt 89641  T
Q  683 ctaacctagtcggtt-gtcaagctgcacctgttgatcgcacggtgatccttacgtgcg 739  Q
    |||||||| || ||| |||||| ||||| ||||||||||||  |||||||||||||||    
T  89640 ctaacctaatctgttcgtcaagttgcacatgttgatcgcacattgatccttacgtgcg 89583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 465 - 586
Target Start/End: Original strand, 114589 - 114710
Alignment:
Q  465 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaac 564  Q
    |||||| ||||||||||| |||||  ||  ||||||||||| ||||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||||    
T  114589 agttgatgatataaaataaaagagacaatggttagagattgtaatttttatctgtttgcaacagaccaaattacctgtttttggttgcagaaaaggaaac 114688  T
Q  565 atcgtttaggactttttgaatc 586  Q
    | || |||||||| ||||||||    
T  114689 aacggttaggactctttgaatc 114710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 640 - 744
Target Start/End: Complemental strand, 497 - 393
Alignment:
Q  640 tatcttaaataaaatatacaagtgatgagactgttgggacgttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcg 739  Q
    |||||||| |||||||||  |||||||||   |||| |||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  497 tatcttaagtaaaatatattagtgatgagttcgttgagacgttttaacctagtcggttgtcaagctgcaccttctgatcacacggtgatccttacgtgcg 398  T
Q  740 gggtg 744  Q
    |||||    
T  397 gggtg 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 60; Significance: 4e-25; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 420 - 586
Target Start/End: Complemental strand, 320 - 151
Alignment:
Q  420 acatggattgtcgtttcatctaaacagttcgtgttatttatttaaa---gttgacgatataaaatataagagttaagagttagagattgcaatttttatt 516  Q
    |||| ||||||||||||||| | ||| || |||||| |||||| ||   ||| ||| ||||||||| ||||  |||  |||||||||||||||||||||     
T  320 acatcgattgtcgtttcatccatacaatttgtgttacttattttaattagttaacggtataaaataaaagaaataatggttagagattgcaatttttatc 221  T
Q  517 tgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatc 586  Q
    ||||||||||| | ||| |||   ||||||||||||||||||||||||| || |||||||| ||||||||    
T  220 tgtttgcaacaaaccaaattatcggtttttggttgcagaaaaggaaacaacggttaggactctttgaatc 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 465 - 586
Target Start/End: Complemental strand, 5759 - 5641
Alignment:
Q  465 agttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaac 564  Q
    |||||| ||||||||||| |||||  ||   |||||||||||||||||||| ||||||||| | | ||| |||| |||||||||||| ||||||||||||    
T  5759 agttgatgatataaaataaaagagacaa---ttagagattgcaatttttatctgtttgcaatagaccaaattacctgtttttggttgtagaaaaggaaac 5663  T
Q  565 atcgtttaggactttttgaatc 586  Q
    | || |||||| | ||||||||    
T  5662 aacggttaggattctttgaatc 5641  T

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Target: scaffold0838 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 363 - 544
Target Start/End: Original strand, 2372 - 2548
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||| |||||||  | |||||| ||||   |||||||||||||||||| | |||| || ||||| || | |||| ||||||    
T  2372 aagtgtaccaaatcgtttaccaaataataaagggataagtagagta---tcgtatccacatggattgacatttcttccaaacaattagcgttaattattt 2468  T
Q  463 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
      | ||||| || ||||||| |||||| ||| ||||||||||| ||  ||||| ||||||||||| || ||||||| |||||    
T  2469 tgatttgacaatttaaaataaaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttacctgttt 2548  T

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Target: scaffold0832 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 363 - 544
Target Start/End: Original strand, 2403 - 2579
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| ||||| |||||||| |||||||  | |||||| ||||   |||||||||||||||||| | |||| || ||||| || | |||| ||||||    
T  2403 aagtgtaccaaatcgtttaccaaataataaagggataagtagagta---tcgtatccacatggattgacatttcttccaaacaattagcgttaattattt 2499  T
Q  463 aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaagttacttgttt 544  Q
      | ||||| || ||||||| |||||| ||| ||||||||||| ||  ||||| ||||||||||| || ||||||| |||||    
T  2500 tgatttgacaatttaaaataaaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttacctgttt 2579  T

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Target: scaffold0035 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 363 - 559
Target Start/End: Original strand, 69915 - 70107
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||| |||||||||||||||||||||| ||  ||||||||   |||||||| |||| ||||||||||||| || ||||| |||  |||| ||||||    
T  69915 aagtgtaccaaatcatttaccaagtaataaagtgacaagtaaag---tatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttattt 70011  T
Q  463 ---aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaa 558  Q
        | ||||| ||||||||| ||||  ||||      | || ||||||||||||||||||||||| | |||||| |||| |||||||||||| ||||||    
T  70012 ttgtatgttgatgatataaaagataaaggtta-----gaaaggttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaa 70106  T

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Target: scaffold0638 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 363 - 559
Target Start/End: Complemental strand, 919 - 726
Alignment:
Q  363 aagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgttatttattt 462  Q
    |||||||||||||| || ||||||||||||| || |||||| ||||   |||||||||    |||||||||||| || ||||| | |  |||| ||||||    
T  919 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagta---tcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattt 824  T
Q  463 ----aaagttgacgatataaaatataagagttaagagttagagattgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaa 557  Q
        ||  |||||||||||||| ||||| ||| |||     |||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||||||    
T  823 ttataagtttgacgatataaaagataagggtttagaa----agattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaa 728  T

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Target: scaffold0653 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 462
Target Start/End: Complemental strand, 4587 - 4484
Alignment:
Q  356 attaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaacagttcgtgtta 455  Q
    |||||| || |||||  |||| |||||||||||| |||||| |||| | ||||   |||||||||||||||||||| |||| | |||||| |||||||||    
T  4587 attaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagta---tcgtatccacatggattgtcatttcgtttaaacaattcgtgtta 4491  T
Q  456 tttattt 462  Q
     ||||||    
T  4490 cttattt 4484  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 678
Target Start/End: Original strand, 3749 - 3824
Alignment:
Q  603 ttgttggataataaataaaatccatgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttggga 678  Q
    |||||||||||||||||| ||  |||||||||||| ||||||||  || | ||||||||||||||| | |||||||    
T  3749 ttgttggataataaataatataaatgtcgcgtttatttatcttaggtagactatacaagtgatgaggccgttggga 3824  T

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Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 12105 - 12182
Alignment:
Q  357 ttaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttca 437  Q
    ||||| |||||||| ||||  |||||||||||||||| || |||||||   |||||||||| || |||||||||| |||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaa---actatcgtattcatatggattgtcatttca 12182  T

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Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 6272 - 6373
Alignment:
Q  346 tgatggtcacattaggtaagtgtactaaatcatttaccaagtaataaaatgttaagtaaagtactatcgtatccacatggattgtcgtttcatctaaaca 445  Q
    |||| |||| |||||| |||||||  ||||| ||||| |||||||||| |  |||||||||||   ||||||||||||||||||| ||||| || |||||    
T  6272 tgatagtcatattaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagta---tcgtatccacatggattgttgtttcgtccaaaca 6368  T
Q  446 gttcg 450  Q
     ||||    
T  6369 attcg 6373  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 626 - 743
Target Start/End: Original strand, 72286 - 72404
Alignment:
Q  626 atgtcgcgtttagttatcttaaataaaatatacaagtgatgagactgttgggacgtt-ctaacctagtcggttgtcaagctgcacctgttgatcgcacgg 724  Q
    ||||| |||||| ||||||| | || | | ||||||| || || | ||||||||||| |||||||||||||| |||||| |||||||  |||| ||  ||    
T  72286 atgtcacgtttatttatcttcagtagactgtacaagttataaggccgttgggacgtttctaacctagtcggtcgtcaagttgcaccttctgattgcttgg 72385  T
Q  725 tgatccttacgtgcggggt 743  Q
    ||||||| |||||||||||    
T  72386 tgatcctaacgtgcggggt 72404  T

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Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 72148 - 72205
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaag-ttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||||| |||||| |||| | ||||| ||||||||||||    
T  72148 ttgcaatttttatctgtttgcaacagagcaagtttacgtatttttagttgcagaaaag 72205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 681 - 743
Target Start/End: Complemental strand, 163882 - 163820
Alignment:
Q  681 ttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||| |||| ||||| |||||| |||||||||||||| |||||||||| ||||||| |||||    
T  163882 ttctaccctaatcggtcgtcaagttgcacctgttgatcacacggtgatcattacgtgtggggt 163820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 681 - 743
Target Start/End: Complemental strand, 181489 - 181427
Alignment:
Q  681 ttctaacctagtcggttgtcaagctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||| |||| ||||| |||||| |||||||||||||| |||||||||| ||||||| |||||    
T  181489 ttctaccctaatcggtcgtcaagttgcacctgttgatcacacggtgatcattacgtgtggggt 181427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 557
Target Start/End: Complemental strand, 181666 - 181612
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaa 557  Q
    ||||||| ||||||||||||||||| |||||||| | ||||||| | ||||||||    
T  181666 ttgcaatatttatttgtttgcaacagagcaagttgcctgttttttggtgcagaaa 181612  T

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Target: scaffold0957 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 591
Target Start/End: Original strand, 3283 - 3371
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaaggaaacatcgtttaggactttttgaatcacccc 591  Q
    |||||||||||||||||||| || | ||||| |||| |||||||||||  ||||||| || || || ||| || |||||||||| ||||    
T  3283 ttgcaatttttatttgtttgtaatagagcaatttacctgtttttggttatagaaaagtaagcagcggttatgattttttgaatcccccc 3371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 15785 - 15841
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagcaagttacttgtttttggttgcagaaaag 559  Q
    |||||||||||||   ||||||||| |||||||||| ||||||||||||| ||||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagttacctgtttttggttgcggaaaag 15841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 828 - 867
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  828 ctgcacctgctgatcgcacgatgatccttacgtgcggggt 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 743
Target Start/End: Original strand, 76803 - 76842
Alignment:
Q  704 ctgcacctgttgatcgcacggtgatccttacgtgcggggt 743  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  76803 ctgcacctgctgatcgcacggtgatccttacgtacggggt 76842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 6066 - 6009
Alignment:
Q  503 ttgcaatttttatttgtttgcaacatagc-aagttacttgtttttggttgcagaaaag 559  Q
    ||||||||||||| ||||||||| | ||| || ||||||||||||||||| |||||||    
T  6066 ttgcaatttttatctgtttgcaatagagcgaatttacttgtttttggttgtagaaaag 6009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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