View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3282_high_12 (Length: 293)
Name: NF3282_high_12
Description: NF3282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3282_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 54863325 - 54863046
Alignment:
| Q |
1 |
ataattgttcacacgtgaagtcaatgttg-attaaagatctaacaatctttcacttggattatttgtgcaaccttataattatgcattgtaagaattatt |
99 |
Q |
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| T |
54863325 |
ataattgttcacacgtgaagtcaatgttggattaaagatctaacaatcttttacttggattatttgtgcaaccttataattatgcattgtaagaattatt |
54863226 |
T |
|
| Q |
100 |
cttaagagttcaaataactatcattattaaatgtatcaataaccaatttggttcatcaatcattccaaacattcgatcaaatcatttatcattacaacga |
199 |
Q |
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| T |
54863225 |
cttaagagttcaaataactatcattattaaatgtatcaataaccaatttggttcatcaatcattccaaacattcgatcaaatcatttatcattacaacga |
54863126 |
T |
|
| Q |
200 |
ttgtagctaaggttgaagataagagtcttgggggcatctaggatgatgtcatttctcaccaaaagattggggaacaaaat |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54863125 |
ttgtagctaaggttgaagataagagtcttgggggcatctaggatgatgtcatttctcaccaaaagattggggaacaaaat |
54863046 |
T |
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