View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3284_low_4 (Length: 266)
Name: NF3284_low_4
Description: NF3284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3284_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 32861428 - 32861189
Alignment:
| Q |
13 |
atgaataaaatggcatgaacttaccaacactggaatgaagatagtataagtg----actcatgatataattcctgcaccccaagaataactttaaaacta |
108 |
Q |
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| T |
32861428 |
atgaataaaatggcatgaacttaccaacactggaatgaagatagtataagtgtattactcatgatataattcctgcaccccaagaataactttaaaacta |
32861329 |
T |
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| Q |
109 |
atttgaaacgaaatcattggtaaatactgcctacgtg--actctaaatattttgtaatttcaaaagcttagaggttcaccaaagaacttaccaaagctgg |
206 |
Q |
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| T |
32861328 |
atttgaaacgaaatcattggtaaatactgcctacgtgtgactctaaatattttgtaatttcgaaagcttagaggttcaccaaagaatttaccaaagctgg |
32861229 |
T |
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| Q |
207 |
atcagatttttcttttcttcagaaaaatgagcctcgtggt |
246 |
Q |
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| T |
32861228 |
atcagatttttctttttttcagaaaaatgagcctcgtggt |
32861189 |
T |
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