View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3286_low_8 (Length: 266)

Name: NF3286_low_8
Description: NF3286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3286_low_8
NF3286_low_8
[»] chr3 (25 HSPs)
chr3 (40-249)||(53956286-53956495)
chr3 (40-151)||(51903837-51903954)
chr3 (46-152)||(13613409-13613516)
chr3 (40-151)||(10499068-10499185)
chr3 (40-151)||(31520564-31520681)
chr3 (40-111)||(52769942-52770019)
chr3 (40-126)||(10445098-10445190)
chr3 (46-148)||(30510164-30510272)
chr3 (75-151)||(8051214-8051290)
chr3 (75-135)||(47236971-47237031)
chr3 (40-144)||(2667869-2667979)
chr3 (40-151)||(14339610-14339727)
chr3 (75-152)||(21960550-21960627)
chr3 (76-129)||(47279405-47279458)
chr3 (75-151)||(36720381-36720457)
chr3 (78-153)||(2597223-2597298)
chr3 (77-128)||(8853801-8853852)
chr3 (76-151)||(35111180-35111255)
chr3 (75-150)||(47454617-47454692)
chr3 (40-74)||(478807-478841)
chr3 (40-111)||(49397500-49397577)
chr3 (75-151)||(14186648-14186723)
chr3 (75-151)||(16354892-16354968)
chr3 (75-151)||(27093361-27093437)
chr3 (75-127)||(27259185-27259237)
[»] chr8 (23 HSPs)
chr8 (40-150)||(29858008-29858124)
chr8 (75-153)||(968360-968438)
chr8 (40-151)||(8484999-8485116)
chr8 (40-151)||(16852340-16852457)
chr8 (40-151)||(28783060-28783177)
chr8 (40-151)||(29431011-29431128)
chr8 (40-130)||(12281515-12281611)
chr8 (75-158)||(19703487-19703570)
chr8 (40-149)||(3624582-3624696)
chr8 (40-148)||(36205198-36205310)
chr8 (75-153)||(6569771-6569849)
chr8 (75-153)||(18540296-18540374)
chr8 (40-139)||(40791854-40791959)
chr8 (40-151)||(44780073-44780190)
chr8 (85-149)||(2203494-2203558)
chr8 (79-151)||(23874386-23874458)
chr8 (76-152)||(43968999-43969075)
chr8 (80-151)||(26688865-26688936)
chr8 (85-151)||(5264544-5264610)
chr8 (77-151)||(12988428-12988502)
chr8 (75-152)||(6436555-6436632)
chr8 (49-151)||(23361617-23361725)
chr8 (75-151)||(18897166-18897242)
[»] chr5 (15 HSPs)
chr5 (40-151)||(30109268-30109384)
chr5 (75-147)||(12883844-12883916)
chr5 (75-154)||(16457807-16457886)
chr5 (40-152)||(16773806-16773924)
chr5 (76-151)||(21549138-21549213)
chr5 (40-152)||(21589287-21589405)
chr5 (40-151)||(29075781-29075898)
chr5 (76-151)||(8278276-8278351)
chr5 (75-151)||(25627057-25627133)
chr5 (75-151)||(30883198-30883274)
chr5 (43-74)||(29813977-29814008)
chr5 (40-73)||(9187499-9187532)
chr5 (75-151)||(14285161-14285237)
chr5 (78-134)||(30000133-30000189)
chr5 (75-151)||(34984806-34984882)
[»] chr2 (24 HSPs)
chr2 (40-151)||(29503271-29503387)
chr2 (40-151)||(7798995-7799111)
chr2 (75-152)||(42327395-42327472)
chr2 (75-135)||(24191854-24191914)
chr2 (75-151)||(29197376-29197452)
chr2 (75-151)||(37480075-37480151)
chr2 (75-151)||(39714992-39715068)
chr2 (43-151)||(19016031-19016145)
chr2 (75-130)||(21213790-21213845)
chr2 (40-120)||(33582004-33582090)
chr2 (49-130)||(12994345-12994431)
chr2 (40-118)||(3660967-3661051)
chr2 (40-150)||(37755930-37756046)
chr2 (40-72)||(8280903-8280935)
chr2 (75-151)||(23052523-23052599)
chr2 (113-153)||(24144674-24144714)
chr2 (40-153)||(26482091-26482209)
chr2 (75-151)||(40416390-40416466)
chr2 (76-130)||(30410550-30410604)
chr2 (40-151)||(42602554-42602671)
chr2 (75-152)||(42922413-42922491)
chr2 (75-127)||(4262302-4262354)
chr2 (75-151)||(4438979-4439055)
chr2 (75-135)||(12086129-12086189)
[»] scaffold0258 (1 HSPs)
scaffold0258 (40-151)||(15282-15399)
[»] scaffold0009 (1 HSPs)
scaffold0009 (75-151)||(19847-19923)
[»] chr6 (10 HSPs)
chr6 (75-151)||(33549104-33549180)
chr6 (42-151)||(12633009-12633124)
chr6 (40-151)||(31622950-31623067)
chr6 (40-152)||(14557961-14558078)
chr6 (75-151)||(12188303-12188379)
chr6 (40-153)||(21418468-21418587)
chr6 (75-147)||(10338174-10338246)
chr6 (75-151)||(30127400-30127476)
chr6 (75-124)||(19162810-19162859)
chr6 (75-147)||(6776607-6776679)
[»] chr4 (25 HSPs)
chr4 (40-153)||(8030163-8030282)
chr4 (43-151)||(51948480-51948594)
chr4 (40-151)||(37720173-37720290)
chr4 (40-129)||(7949413-7949508)
chr4 (75-151)||(19238577-19238653)
chr4 (75-151)||(37109351-37109427)
chr4 (75-151)||(55427200-55427276)
chr4 (40-151)||(28635696-28635813)
chr4 (75-151)||(39509070-39509146)
chr4 (75-151)||(47044717-47044793)
chr4 (75-130)||(13015448-13015503)
chr4 (79-130)||(17618302-17618353)
chr4 (75-127)||(23377980-23378032)
chr4 (75-147)||(24234649-24234721)
chr4 (75-151)||(51250522-51250598)
chr4 (75-130)||(13901763-13901818)
chr4 (75-130)||(38869789-38869844)
chr4 (45-151)||(9241000-9241101)
chr4 (75-148)||(41346963-41347036)
chr4 (75-144)||(49576894-49576963)
chr4 (75-151)||(19680788-19680864)
chr4 (103-151)||(20608922-20608970)
chr4 (75-151)||(21344817-21344892)
chr4 (75-151)||(31759658-31759734)
chr4 (75-151)||(33619206-33619282)
[»] chr1 (29 HSPs)
chr1 (75-151)||(30689012-30689088)
chr1 (40-151)||(40257399-40257516)
chr1 (75-130)||(31383798-31383853)
chr1 (40-151)||(16893394-16893511)
chr1 (40-147)||(17745216-17745328)
chr1 (78-151)||(1690080-1690153)
chr1 (40-152)||(2219971-2220089)
chr1 (40-152)||(31794223-31794341)
chr1 (43-151)||(50901581-50901695)
chr1 (75-132)||(12370183-12370239)
chr1 (75-151)||(9117119-9117195)
chr1 (95-151)||(9165215-9165271)
chr1 (75-151)||(19528327-19528403)
chr1 (75-151)||(36371470-36371546)
chr1 (75-151)||(51814494-51814570)
chr1 (75-149)||(33700773-33700847)
chr1 (75-153)||(37400272-37400350)
chr1 (75-133)||(43445981-43446039)
chr1 (85-151)||(45235389-45235455)
chr1 (76-130)||(52336775-52336829)
chr1 (75-128)||(15786320-15786373)
chr1 (85-130)||(36124854-36124899)
chr1 (75-151)||(4566548-4566624)
chr1 (75-151)||(16169978-16170054)
chr1 (40-76)||(16679146-16679182)
chr1 (75-151)||(21547480-21547556)
chr1 (75-131)||(24047102-24047158)
chr1 (75-135)||(31605848-31605908)
chr1 (95-151)||(52116801-52116857)
[»] chr7 (30 HSPs)
chr7 (76-151)||(48771938-48772013)
chr7 (40-151)||(2446308-2446425)
chr7 (40-151)||(23301561-23301678)
chr7 (40-151)||(25590611-25590728)
chr7 (43-125)||(5934147-5934235)
chr7 (40-111)||(7309396-7309472)
chr7 (75-151)||(26459410-26459486)
chr7 (42-125)||(22035424-22035513)
chr7 (40-151)||(30579335-30579452)
chr7 (75-148)||(15905674-15905746)
chr7 (75-152)||(39499719-39499796)
chr7 (75-151)||(22760863-22760939)
chr7 (85-151)||(3280495-3280561)
chr7 (75-129)||(20335831-20335885)
chr7 (40-151)||(43590907-43591024)
chr7 (78-151)||(7801180-7801253)
chr7 (95-148)||(20952169-20952222)
chr7 (40-130)||(45228984-45229080)
chr7 (75-151)||(23552118-23552194)
chr7 (95-151)||(25021355-25021411)
chr7 (75-151)||(39631844-39631920)
chr7 (75-151)||(43215184-43215260)
chr7 (75-130)||(7721390-7721445)
chr7 (86-133)||(28236592-28236639)
chr7 (85-151)||(5579244-5579310)
chr7 (40-131)||(5668530-5668627)
chr7 (40-135)||(11720919-11721020)
chr7 (95-149)||(21854550-21854604)
chr7 (102-151)||(42836028-42836077)
chr7 (75-151)||(30442488-30442564)
[»] scaffold0122 (1 HSPs)
scaffold0122 (40-130)||(6881-6974)
[»] scaffold0299 (1 HSPs)
scaffold0299 (75-135)||(11544-11604)
[»] scaffold0032 (1 HSPs)
scaffold0032 (43-151)||(112282-112396)
[»] scaffold0074 (1 HSPs)
scaffold0074 (75-128)||(45759-45812)
[»] scaffold0101 (1 HSPs)
scaffold0101 (75-130)||(43332-43387)
[»] scaffold0517 (1 HSPs)
scaffold0517 (75-153)||(7726-7804)
[»] scaffold0417 (1 HSPs)
scaffold0417 (40-151)||(10219-10336)
[»] scaffold1367 (1 HSPs)
scaffold1367 (75-135)||(840-900)
[»] scaffold0002 (1 HSPs)
scaffold0002 (80-148)||(94976-95044)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 40 - 249
Target Start/End: Complemental strand, 53956495 - 53956286
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacgaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaa 139  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  53956495 ttgaaggagctaaattggtccatttaaattgacacgaatcgaacatgagacctcaagaaggggcacactcccgggtcccaagccaatgccatcaggacaa 53956396  T
Q  140 tccaagtgggttcagaaatgataatattaatgtggatgcttttgatagtggatacaccgctaacatgatgagcagataaacttgatcaactggctatcac 239  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  53956395 cccaagtgggttcagaaatgataatattaatgtggatgcttttgatattggatacaccgctaacaagatgagcagataaacttgatcaactggctatcac 53956296  T
Q  240 accagcattt 249  Q
    ||||||||||    
T  53956295 accagcattt 53956286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 51903837 - 51903954
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||| ||||||||||      ||||||||| ||||||| | |||||| |||||||||| | |||||||||||||||| ||    
T  51903837 ttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaaca 51903936  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| ||| |||||||    
T  51903937 ggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 13613409 - 13613516
Alignment:
Q  46 aagctaaattagtccacttaaattgacac-gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaa 144  Q
    |||||||||||| |||||||||||||| | | |  |||||||||||  |||||||| ||||||| || |||||||||||| |||||||||||||  ||||    
T  13613409 aagctaaattagcccacttaaattgacgctggagagaacatgagactacaaggaggagcacacttccaggtcccaagccattaccatcaggacagcccaa 13613508  T
Q  145 gtgggttc 152  Q
    ||| ||||    
T  13613509 gtgagttc 13613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 10499068 - 10499185
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  |||||||||       ||||||||| |||||||||||||| | ||| |||||| | |||||||||||||||| ||    
T  10499068 ttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccacca 10499167  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  10499168 ggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 31520564 - 31520681
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    ||||| |||||||||||| ||||| ||||||||||      ||||| ||| | ||||||| |||||| |||||||||| | |||||||||||| ||| ||    
T  31520564 ttgaaaaagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccacca 31520663  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  31520664 ggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 52769942 - 52770019
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactccc 111  Q
    |||||||||||||||||| |||| |||||||||||      ||||||||| |||||||||||||||| ||||||||||    
T  52769942 ttgaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactccc 52770019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 10445098 - 10445190
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaat 126  Q
    |||||||||||||||||| ||||| |||||  |||      ||||||||| ||||||||| |||||| |||||||||| ||||||||||||||    
T  10445098 ttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 30510164 - 30510272
Alignment:
Q  46 aagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaa 139  Q
    |||||||||||| ||||||| ||||||||      ||||||||| ||||||||| || ||| ||| |||||  |||||||||||| ||||| ||||||||    
T  30510164 aagctaaattagcccacttagattgacactagagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaa 30510263  T
Q  140 tccaagtgg 148  Q
     ||||||||    
T  30510264 cccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 8051290 - 8051214
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||| |||||  ||| ||| || |||||||||||||||||| |||| ||| |||||||||||    
T  8051290 gaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 47236971 - 47237031
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    ||||||||||||||||||  | |||| ||||||||||||||||||| ||||||||| ||||    
T  47236971 gaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccagg 47237031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 2667979 - 2667869
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacga------atcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||| ||| |||| ||||||||||| |      ||||||| ||||||||| |||| | |||||||||| | |||||||||||||||| ||    
T  2667979 ttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccacca 2667880  T
Q  134 ggacaatccaa 144  Q
    || ||| ||||    
T  2667879 ggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 14339727 - 14339610
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| | ||||| |||      ||||||||| |||||| |  |||||| ||||||||||   |||||||||||||||| ||    
T  14339727 ttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccacca 14339628  T
Q  134 ggacaatccaagtgggtt 151  Q
    || |||||||| ||||||    
T  14339627 ggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 21960627 - 21960550
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttc 152  Q
    ||||||||  ||||||||| |||||| |||||||| | |||||||||||||||||| |||  ||| |||| |||||||    
T  21960627 gaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggttc 21960550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 47279405 - 47279458
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacc 129  Q
    ||||||||||||||||| ||||||| |||||||||| | |||||||| ||||||    
T  47279405 aatcgaacatgagaccttaaggaggagcacactcccagatcccaagcaaatacc 47279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 36720457 - 36720381
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||| ||||| |||||| ||||||||||   |||||||||||||||| |||  ||| |||||||||||    
T  36720457 gaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 2597223 - 2597298
Alignment:
Q  78 tcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttca 153  Q
    |||||| |||||||||||||||| |||||||||    ||| |||||||||||| |||  ||| |||||||||||||    
T  2597223 tcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggttca 2597298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 8853801 - 8853852
Alignment:
Q  77 atcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatac 128  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||| |||||    
T  8853801 atcgaacatgagacctcaaggaggagcatactcccatgtcccaagctaatac 8853852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 35111255 - 35111180
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||||||||||||||| |||| | |||||||||| |||| |||  |||| |||  ||| |||||||||||||||    
T  35111255 aatcgaacatgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtt 35111180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 47454617 - 47454692
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggt 150  Q
    ||||||||| ||||||||| |||||| |||||||||  | || |||||||||||||  || |||| ||||||||||    
T  47454617 gaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 478807 - 478841
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  478807 ttgaagaagctaaattagcccacttaaattgacac 478841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 49397500 - 49397577
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgaca------cgaatcgaacatgagacctcaaggaggggcacactccc 111  Q
    ||||||||||||||||||||||| ||||||||||        |||||||||||||||||| |||||  ||||||||||    
T  49397500 ttgaagaagctaaattagtccacctaaattgacatctaagataatcgaacatgagacctcgaggagaagcacactccc 49397577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 14186723 - 14186648
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| ||||||||| || ||||||| ||||||||  ||| ||| |||||||||||    
T  14186723 gaatcgaacctgagaccttgaggaggagcacactccagg-tcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 16354892 - 16354968
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| |||||||   |||||| |||||||| | ||| ||||||||||||||  ||| ||| |||||||||||    
T  16354892 gaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 27093361 - 27093437
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||| ||| ||||||||  |||||| ||||||||||  || ||||||||||||||  ||| ||| |||||||||||    
T  27093361 gaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 27259237 - 27259185
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaata 127  Q
    ||||| ||| ||| ||||| |||||| |||||||||| |||||||||||||||    
T  27259237 gaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 29858008 - 29858124
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    ||||| |||||||||||| |||| ||||||| |||      ||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||| ||    
T  29858008 ttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccacca 29858107  T
Q  134 ggacaatccaagtgggt 150  Q
    || ||||||||||||||    
T  29858108 ggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 968438 - 968360
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttca 153  Q
    ||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||| |||| |||  ||||||||||||    
T  968438 gaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggttca 968360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 8485116 - 8484999
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| ||||||| |||      |||||||| |||||||||||| |||| |||||||| | |||||||||| ||||||| ||    
T  8485116 ttgaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccacca 8485017  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  8485016 ggccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 16852457 - 16852340
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||| ||| |||| ||||||| |||      ||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||||  |    
T  16852457 ttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacta 16852358  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  16852357 ggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 28783177 - 28783060
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  |||||| |||      ||||||||||||||||||  |||||| |||||||||| |||| ||||||||||||| ||    
T  28783177 ttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccacca 28783078  T
Q  134 ggacaatccaagtgggtt 151  Q
     | ||| |||||||||||    
T  28783077 agccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 29431128 - 29431011
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||| |||||  |||      ||||||||| |||| ||||||||||| ||||||||||  ||||||||||||||||  ||    
T  29431128 ttgaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgcca 29431029  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  29431028 ggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 12281611 - 12281515
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgaca-cg-----aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||||||||||||||  |||||||||||| ||     |||||||  ||||||||| ||||||||||||||| | ||||||||||||||||||    
T  12281611 ttgaagaagctaaattagtcagcttaaattgacatcggagaaaatcgaatctgagacctcgaggaggggcacactctcaggtcccaagccaatacca 12281515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 19703487 - 19703570
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttcagaaat 158  Q
    ||||||||| ||||||||  |||||| |||||||| | ||||||||||||||||||  ||| ||| ||||||||||| ||||||    
T  19703487 gaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtttagaaat 19703570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 3624696 - 3624582
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacg-----aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcag 134  Q
    ||||| |||||||||||| |||| ||||||||| ||     |||||||| ||||||||  | |||| |||||||||| ||||||||||||||||||  ||    
T  3624696 ttgaaaaagctaaattagcccacctaaattgacccggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactag 3624597  T
Q  135 gacaatccaagtggg 149  Q
    | ||| |||||||||    
T  3624596 gccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 36205310 - 36205198
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacg----aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    ||||||||||||||||||||||  |||||||||  |    |||||||||||||||||  |||||| |||||||||| | || ||| |||||| ||||||     
T  36205310 ttgaagaagctaaattagtccatctaaattgaccggggagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaataacatcaga 36205211  T
Q  136 acaatccaagtgg 148  Q
     ||| ||||||||    
T  36205210 ccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 6569771 - 6569849
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttca 153  Q
    ||||||||||||| |||| ||||||| |||||||||| | ||||||||||||| ||  ||| ||| | |||||||||||    
T  6569771 gaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggttca 6569849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 18540374 - 18540296
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttca 153  Q
    ||||||||| ||||||||  |||||  | |||||||| ||||||||||||||||||  ||| ||| |||||||||||||    
T  18540374 gaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggttca 18540296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 40791854 - 40791959
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||||||||||||||       |||||||| | |||| ||||||||| ||||| ||   ||||||| |||||||||| ||    
T  40791854 ttgaagaagctaaattagcccacttaaattgacactagagaaaatcgaacctaagacttcaaggaggagcacattctgaggtcccaggccaataccacca 40791953  T
Q  134 ggacaa 139  Q
    ||||||    
T  40791954 ggacaa 40791959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 44780073 - 44780190
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  ||||||||||      ||||| ||| ||||||||  |||||| ||||||||||  ||||||||||||| |||  |    
T  44780073 ttgaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccacta 44780172  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  44780173 ggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 2203558 - 2203494
Alignment:
Q  85 tgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtggg 149  Q
    ||||||||  |||||| |||||||||| ||||||||||||||||||  ||| ||| |||||||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 23874386 - 23874458
Alignment:
Q  79 cgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||| ||||||||| |||||| ||| | |||| ||||||||||||||||||  ||| ||| |||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 43968999 - 43969075
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttc 152  Q
    |||||||  |||||||||| ||||| |||||||||   | |||||||||||||||||| | ||| ||||||||||||    
T  43968999 aatcgaatctgagacctcagggaggagcacactcctaagccccaagccaataccatcatgccaacccaagtgggttc 43969075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 26688936 - 26688865
Alignment:
Q  80 gaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||| ||||||||  |||||| |||||||||  ||||||||||||| |||| |||| ||| |||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 5264610 - 5264544
Alignment:
Q  85 tgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| |||||| ||||| |||| ||| ||||||||||||||  ||| ||| |||||||||||    
T  5264610 tgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggtt 5264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 12988502 - 12988428
Alignment:
Q  77 atcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||| ||| ||||  |||||| ||||||| || ||| ||||||||||||||  ||| |||||||||||||||    
T  12988502 atcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggtt 12988428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 6436555 - 6436632
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttc 152  Q
    ||||||||  ||||||||   ||||| |||||||||   ||||||||||||||||| |||| ||| ||||||||||||    
T  6436555 gaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggttc 6436632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 23361617 - 23361725
Alignment:
Q  49 ctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatcc 142  Q
    ||||||||| |||| |||||||||||      |||| |||| ||||||||  |||||| ||||||||||   ||||||| |||||||| |||| ||| ||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccc 23361716  T
Q  143 aagtgggtt 151  Q
    |||||||||    
T  23361717 aagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 18897242 - 18897166
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||||||||||||  |||||| ||||||||   |||||||| |||| ||||  ||| ||| |||||||||||    
T  18897242 gaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 30109268 - 30109384
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac-----gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcag 134  Q
    |||||||||||||||||| |||| ||||||  |||     ||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||| ||     
T  30109268 ttgaagaagctaaattagcccacctaaattagcaccgggggaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaa 30109367  T
Q  135 gacaatccaagtgggtt 151  Q
    | ||| |||||||||||    
T  30109368 gccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 12883916 - 12883844
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtg 147  Q
    |||| ||||||||||||||||||||| |||||||||| | |||||| | |||||||||||| |||||||||||    
T  12883916 gaattgaacatgagacctcaaggaggagcacactcccagatcccaacctaataccatcaggtcaatccaagtg 12883844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 16457886 - 16457807
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttcag 154  Q
    |||| |||||||||||||  |||||| |||||||||  |||||||||||||||||| |||| ||| | ||||||||||||    
T  16457886 gaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggttcag 16457807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 16773924 - 16773806
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| ||||||| ||       ||||||||| ||||||||| |||||| |||||||||| ||||||||| |||||||| ||    
T  16773924 ttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccacca 16773825  T
Q  134 ggacaatccaagtgggttc 152  Q
    |  |||  |||||||||||    
T  16773824 gaccaactcaagtgggttc 16773806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 21549138 - 21549213
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||||| |||||| | ||||||| |||||||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  21549138 aatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 21589405 - 21589287
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||| ||| |||| ||||||| |||      ||||||||| |||||| || |||||  ||| |||||| |||||||||||||||||| ||    
T  21589405 ttgaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccacca 21589306  T
Q  134 ggacaatccaagtgggttc 152  Q
    || ||| ||||||||||||    
T  21589305 ggccaacccaagtgggttc 21589287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 29075898 - 29075781
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||  ||||||| |||      ||||||||||||||| ||| |||||| |||||||||| | ||||||||||||||||  |    
T  29075898 ttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccacta 29075799  T
Q  134 ggacaatccaagtgggtt 151  Q
    ||  || |||||||||||    
T  29075798 ggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 8278276 - 8278351
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||| ||| ||||| ||| |||||| ||||||||||  |||||||||||||||||||||  ||| |||||||||||    
T  8278276 aatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 25627133 - 25627057
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| ||||||||||  || ||||||||||||||  ||| ||| |||||||||||    
T  25627133 gaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 30883198 - 30883274
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||| |||| ||||||||  |||||| |||||||||| ||||||||||||||||||  ||  ||| |||||||||||    
T  30883198 gaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 74
Target Start/End: Complemental strand, 29814008 - 29813977
Alignment:
Q  43 aagaagctaaattagtccacttaaattgacac 74  Q
    ||||||||||||||||||||||||||||||||    
T  29814008 aagaagctaaattagtccacttaaattgacac 29813977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 9187532 - 9187499
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgaca 73  Q
    |||||||||||||||||||||||| |||||||||    
T  9187532 ttgaagaagctaaattagtccactcaaattgaca 9187499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 14285237 - 14285161
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||||| ||| |||||||||| |||   || ||| |||||||||||    
T  14285237 gaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 30000189 - 30000133
Alignment:
Q  78 tcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcag 134  Q
    |||||| ||||||||| |||||| ||| |||||||| ||||||||||| | ||||||    
T  30000189 tcgaacctgagacctcgaggaggtgcatactcccggatcccaagccaaaatcatcag 30000133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 34984882 - 34984806
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| | ||||||  |||||| |||||||||| ||| ||||||||||||||  ||  ||| |||||||||||    
T  34984882 gaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 29503387 - 29503271
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac-----gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcag 134  Q
    |||||||||||||||| | ||||||||||||||||     ||||||||| ||||||||  |||||| |||||||||| |||||||| |||||||||  ||    
T  29503387 ttgaagaagctaaatttgcccacttaaattgacaccgggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactag 29503288  T
Q  135 gacaatccaagtgggtt 151  Q
    | ||| |||||||||||    
T  29503287 gccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 7798995 - 7799111
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||||||||||| |||      ||||||||  ||||| ||| |||||| ||||||||||  ||||||||||||||||| ||    
T  7798995 ttgaagaagctaaattag-ccacttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccacca 7799093  T
Q  134 ggacaatccaagtgggtt 151  Q
    |||||| |||||||||||    
T  7799094 ggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 42327395 - 42327472
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttc 152  Q
    ||||||||| ||||||||  |||||| |||||||||| ||||||||||||||||||  ||| ||| ||||||||||||    
T  42327395 gaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttc 42327472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 24191914 - 24191854
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    ||||||| ||||||| |||||||||| |||||||| | |||||||||||||||||||||||    
T  24191914 gaatcgatcatgagatctcaaggaggagcacactctcaggtcccaagccaataccatcagg 24191854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 29197376 - 29197452
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||||||||||||| ||||||||| ||||||||||  |||||||| |||||||| || | ||| |||||||||||    
T  29197376 gaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 37480151 - 37480075
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||| | |||||||||||||||||| |||| ||| |||||||||||    
T  37480151 gaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 39715068 - 39714992
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||| |||||| |||||||||| ||||||||| |||||||| || | ||| |||||||||||    
T  39715068 gaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 19016145 - 19016031
Alignment:
Q  43 aagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagga 136  Q
    ||||||||||||||| | |||||||||| |||      ||||| ||| ||||||||| |||||| ||||||||||  ||| |||||||||||||||||      
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagac 19016046  T
Q  137 caatccaagtgggtt 151  Q
    ||| |||||||||||    
T  19016045 caacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 21213845 - 21213790
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  21213845 gaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaatacca 21213790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 33582090 - 33582004
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaa 120  Q
    ||||||||||||||||||||||| ||||||||||       ||||||||| |||||||||||||||| |||||||| | ||||||||    
T  33582090 ttgaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactctcaggtcccaa 33582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 12994345 - 12994431
Alignment:
Q  49 ctaaattagtccacttaaattgacac-----gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||||||||| | ||||||||     ||||||||| |||||||| ||||||| |||||||||| ||||||||| ||||||||    
T  12994345 ctaaattagtccactcatattgacaccggtggaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaatacca 12994431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 3660967 - 3661051
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgaca------cgaatcgaacatgagacctcaaggaggggcacactcccgggtccc 118  Q
    |||||||||||||||| |||||||||||||||||       ||||||||| ||||| ||| ||||||||||||||| | ||||||    
T  3660967 ttgaagaagctaaatttgtccacttaaattgacatttgagagaatcgaacctgagatctcgaggaggggcacactctcaggtccc 3661051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 37755930 - 37756046
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||| |||||| ||       || |||||| ||||||||| || ||| ||||| |||| |||||||||||||||||| ||    
T  37755930 ttgaagaagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccacca 37756029  T
Q  134 ggacaatccaagtgggt 150  Q
     | ||| ||||||||||    
T  37756030 agccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 8280903 - 8280935
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgac 72  Q
    |||||||||||||||||||||||||||||||||    
T  8280903 ttgaagaagctaaattagtccacttaaattgac 8280935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 23052523 - 23052599
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||  ||||||||||  ||||||||||||||||| |||| ||| | |||||||||    
T  23052523 gaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 24144714 - 24144674
Alignment:
Q  113 ggtcccaagccaataccatcaggacaatccaagtgggttca 153  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  24144714 ggtcccaagtcaataccatcaggccaatccaagtgggttca 24144674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 26482209 - 26482091
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||| ||||||| ||||| |||||| |||      ||||||||| ||||||||  || ||| |||||||||  ||||||||||||| |||||||    
T  26482209 ttgaagaagccaaattagcccactgaaattggcactgaggagaatcgaacctgagaccttgag-aggagcacactcctaggtcccaagccaacaccatca 26482111  T
Q  134 ggacaatccaagtgggttca 153  Q
    || ||| | |||||||||||    
T  26482110 ggccaacctaagtgggttca 26482091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 40416390 - 40416466
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| |||||||| ||||||| ||| |||||| ||| ||||| ||||||||  ||| ||| |||||||||||    
T  40416390 gaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 30410550 - 30410604
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||||||| |||  |||||| |||||||||  ||||||||||||||||||    
T  30410550 aatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaatacca 30410604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 42602671 - 42602554
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  |||||| |||      ||||| ||| | ||||||  || ||| |||||||||| ||||||||||||||||||  |    
T  42602671 ttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccacta 42602572  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  42602571 ggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 42922491 - 42922413
Alignment:
Q  75 gaatcgaacatgagacctca-aggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttc 152  Q
    ||||||||| ||||||||   |||||| |||||||||| ||| ||||||||||||||  ||| ||| ||||||||||||    
T  42922491 gaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttc 42922413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 4262302 - 4262354
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaata 127  Q
    ||||||||| ||||||||  |||||| ||||||| || |||||||||||||||    
T  4262302 gaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 4438979 - 4439055
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||||||||| |||||  |||||| |||||||| | | |||||||  |||||||| ||| ||| |||||||||||    
T  4438979 gaatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 12086129 - 12086189
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    |||||||||  |||||||  |||||| ||||||| || |||||||||||||||||| ||||    
T  12086129 gaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccagg 12086189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 15282 - 15399
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| ||||||| ||       ||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||| ||    
T  15282 ttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacca 15381  T
Q  134 ggacaatccaagtgggtt 151  Q
    |  ||| |||||||||||    
T  15382 gaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 19847 - 19923
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| |||||||||||||||| ||| |||||| | ||||||||||||||||||| | |||| ||||||||||    
T  19847 gaatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgccaattcaagtgggtt 19923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 33549180 - 33549104
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||| |||  ||| |||||||||||    
T  33549180 gaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 12633124 - 12633009
Alignment:
Q  42 gaagaagctaaattagtccacttaaattgaca------cgaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||| ||| | |||| ||||||||||   ||||||| ||||| || | ||    
T  12633124 gaagaagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccggg 12633025  T
Q  136 acaatccaagtgggtt 151  Q
    |||| |||||||||||    
T  12633024 acaacccaagtgggtt 12633009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 31622950 - 31623067
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  ||||||||||      || || ||| ||||||||| |||||| |||||||||| |||||||||||||||||| |     
T  31622950 ttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccg 31623049  T
Q  134 ggacaatccaagtgggtt 151  Q
    |  ||| |||||||||||    
T  31623050 gaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 14558078 - 14557961
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac-----gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcag 134  Q
    |||||||||||||||||| ||||  ||||||||||     ||||||||| |||||||   |||||| ||||||| || ||||||||||||| |||| |||    
T  14558078 ttgaagaagctaaattagaccacccaaattgacaccgggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccag 14557979  T
Q  135 gacaatccaagtgggttc 152  Q
      ||| ||||||||||||    
T  14557978 accaacccaagtgggttc 14557961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 12188303 - 12188379
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||| ||||  |||||| |||||||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  12188303 gaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 21418587 - 21418468
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| | ||||| |||      ||||||||| |||||| |  |||||| ||||||||||  ||||||||||||||||| ||    
T  21418587 ttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccacca 21418488  T
Q  134 ggacaatccaagtgggttca 153  Q
    || ||| |||| ||||||||    
T  21418487 ggccaacccaactgggttca 21418468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 10338174 - 10338246
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtg 147  Q
    ||||||||| ||||||||  |||||| |||||||||  |||||||||||||||||| || | ||| |||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 30127476 - 30127400
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||| | |||| |||||||||| |  ||||||||||||||| |||  ||| |||||||||||    
T  30127476 gaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 19162859 - 19162810
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagcca 124  Q
    ||||||||| ||||| ||| |||||| ||||||||||| |||||||||||    
T  19162859 gaatcgaacctgagatctcgaggaggagcacactcccgtgtcccaagcca 19162810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 6776607 - 6776679
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtg 147  Q
    ||||| ||| |||||| || |||||| |||||| ||| | |||||||||||||||| |||| ||| |||||||    
T  6776607 gaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 8030163 - 8030282
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  ||||||||||      ||||||||| ||||||||  |||||| ||||||||||  |||||||||| ||||||  |    
T  8030163 ttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccacta 8030262  T
Q  134 ggacaatccaagtgggttca 153  Q
    || |||||||||||||||||    
T  8030263 gggcaatccaagtgggttca 8030282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 51948594 - 51948480
Alignment:
Q  43 aagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagga 136  Q
    |||||| |||||||||||| ||||||||||||      |||| |||| ||||||||| ||||||||||||||||  | ||||||| |||||| | |||||    
T  51948594 aagaagttaaattagtccatttaaattgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccagga 51948495  T
Q  137 caatccaagtgggtt 151  Q
    ||| |||||||||||    
T  51948494 caacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 37720173 - 37720290
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| ||||||||  |      ||||||||| || |||||  ||||||||||||||||| ||||||||||||||| || ||    
T  37720173 ttgaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacacca 37720272  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  37720273 ggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 7949413 - 7949508
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacc 129  Q
    |||||||||||||||||| |||| |||||||||||      ||||||||| ||||||||  |||||| |||||||||  |||||||||||||||||    
T  7949413 ttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 19238577 - 19238653
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||||||  |||||||| |||||| ||||||||||  ||||||||||||||||| |||| ||| |||||||||||    
T  19238577 gaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 37109351 - 37109427
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  37109351 gaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 55427200 - 55427276
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||| || ||| ||| |||||| |||||||||||||||||| |||| ||| |||||||||||    
T  55427200 gaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 28635813 - 28635696
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  |||||| |||      ||||||||| | ||||||| |||||| |||||||||| | ||||||| || ||||| ||    
T  28635813 ttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccacca 28635714  T
Q  134 ggacaatccaagtgggtt 151  Q
    |||||| |||||||||||    
T  28635713 ggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 39509146 - 39509070
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||| |||||| |||||||||| | |||||||||| |||||| ||  ||| |||||||||||    
T  39509146 gaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 47044793 - 47044717
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||| |||||| ||| |||| | | ||||||| |||||||| |||| |||||||||||||||    
T  47044793 gaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 13015503 - 13015448
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    |||||||||||||||| || |||||| ||||||||||  |||||||||||||||||    
T  13015503 gaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaatacca 13015448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 17618353 - 17618302
Alignment:
Q  79 cgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||||||||| |||||| |||||||||| |||| |||||||||||||    
T  17618353 cgaacatgagacctcgaggaggagcacactcccaggtctcaagccaatacca 17618302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 23378032 - 23377980
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaata 127  Q
    ||||||||| ||||||||  |||||| |||||||||| |||||||||||||||    
T  23378032 gaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 24234721 - 24234649
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtg 147  Q
    ||||||||| ||||||||  |||| | ||||||||||  ||||||||||||||||| | |||||| |||||||    
T  24234721 gaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacctggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 51250522 - 51250598
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||| ||  ||| || |||||||||| | |||||||||||||||| |||| ||| |||||||||||    
T  51250522 gaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 13901818 - 13901763
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    |||| |||| ||||||||||||||||  ||||||||| |||| |||||||||||||    
T  13901818 gaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaatacca 13901763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 38869844 - 38869789
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||| ||||||||  |||||| |||||||||| | ||||||||||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatacca 38869789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 9241000 - 9241101
Alignment:
Q  45 gaagctaaattagtccacttaaattgacacgaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaa 144  Q
    |||| |||||||||||||  ||||||||     |||||| | ||||||| || ||| ||||||| || | |||||||||||||||| |||| ||| ||||    
T  9241000 gaagataaattagtccacccaaattgac-----tcgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaa 9241094  T
Q  145 gtgggtt 151  Q
    |||||||    
T  9241095 gtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 41346963 - 41347036
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgg 148  Q
    ||||||||| |||||| || |||||| ||| |||||| | || ||| |||||||||||||| ||| ||||||||    
T  41346963 gaatcgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 49576894 - 49576963
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaa 144  Q
    ||||||||| ||||||||  |||||| ||||||||||  |||| |||||||||||| |||| ||| ||||    
T  49576894 gaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 19680788 - 19680864
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| | ||||||  |||| | ||||||||||  ||||||||| |||||||  ||| |||||||||||||||    
T  19680788 gaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 20608970 - 20608922
Alignment:
Q  103 cacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||||| || |||||||||||||||||  ||| |||||||||||    
T  20608970 cacactcccggatctcaagccaataccatcagatcaacccaagtgggtt 20608922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 21344892 - 21344817
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||| |||||||||||||  || ||| |||||||||  ||||||||||||| | ||||||| ||| |||||||||||    
T  21344892 gaattgaacatgagaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgggtt 21344817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 31759658 - 31759734
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||  ||||||||  |||||| ||||||||||  |||||||||||||||||  ||  ||| |||||||||||    
T  31759658 gaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 33619282 - 33619206
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| | ||||||||||||||  ||| ||||| | ||| |||||||||||| || | ||| |||||||||||    
T  33619282 gaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 30689088 - 30689012
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||| ||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||| ||| | |||||||||    
T  30689088 gaattgaacatgagacctcaaggaggagcaaactcccaggtcctaagccaataccatcagggcaacctaagtgggtt 30689012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 40257516 - 40257399
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||| ||| ||||  ||||||||||      |||| |||| ||||||||| |||||| |||||||||| |||| ||||||||||||| ||    
T  40257516 ttgaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccacca 40257417  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  40257416 ggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 31383798 - 31383853
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||| ||||||| |||||||| |||||||||| ||||||||||||||||||    
T  31383798 gaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaatacca 31383853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 16893511 - 16893394
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacg------aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||| ||||||||||       |||||||| ||||||||| |||||| | ||||||||   || ||||||||||||| ||    
T  16893511 ttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaaca 16893412  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  16893411 ggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 17745216 - 17745328
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||  |||| |||||||||||      ||||||||||||||||||| |||||| |||||| | | ||||||||||||||||||  |    
T  17745216 ttgaagaagctaaattaa-ccacctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccacta 17745314  T
Q  134 ggacaatccaagtg 147  Q
    || ||| |||||||    
T  17745315 ggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 1690080 - 1690153
Alignment:
Q  78 tcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||| ||||||||||||||||  || |||||| |||||||||||||||||| |||  |||| ||||||||||    
T  1690080 tcgaacttgagacctcaaggaggaacagactcccaggtcccaagccaataccaccagaccaattcaagtgggtt 1690153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 2220089 - 2219971
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||| ||||||||| ||| |||||||||||       ||||||||| ||||||||| |||||  |||||||  | ||| |||||||||||||| ||    
T  2220089 ttgaagaaactaaattagcccatttaaattgacattggagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccacca 2219990  T
Q  134 ggacaatccaagtgggttc 152  Q
    | |||| ||||||||||||    
T  2219989 gaacaacccaagtgggttc 2219971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 31794223 - 31794341
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  ||||||||||      |||||||||   ||||||  |||||| ||||||||||  |||||||||||||||||  |    
T  31794223 ttgaagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccacta 31794322  T
Q  134 ggacaatccaagtgggttc 152  Q
    || ||| ||||||||||||    
T  31794323 ggccaacccaagtgggttc 31794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 50901695 - 50901581
Alignment:
Q  43 aagaagctaaattagtccacttaaattgacac-----gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaa-taccatcagga 136  Q
    ||||||||||||||| |||| ||||||| |||     ||||||||  ||||||||| |||||| ||||||| || ||||||||||||| |||||  |||     
T  50901695 aagaagctaaattagcccacctaaattggcactgagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggc 50901596  T
Q  137 caatccaagtgggtt 151  Q
    ||| |||||||||||    
T  50901595 caacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 12370239 - 12370183
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatc 132  Q
    ||||| ||||||||||||| |||||| |||||||||| ||||||||| ||||||||||    
T  12370239 gaatcaaacatgagacctcgaggaggagcacactcccaggtcccaag-caataccatc 12370183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 9117195 - 9117119
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| |||||||||||||||| ||||||| || | ||||||||| |||||| | || ||| |||| ||||||    
T  9117195 gaatcgaacctgagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaacccaaatgggtt 9117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 9165215 - 9165271
Alignment:
Q  95 aggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||| |||||||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  9165215 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 19528327 - 19528403
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| ||||||||   | |||||||||||||||| |||| ||| |||||||||||    
T  19528327 gaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 36371546 - 36371470
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| | ||||||  |||||| |||||||||| ||| ||||||||||||||  ||| ||| |||||||||||    
T  36371546 gaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 51814570 - 51814494
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||| | | || |||| ||||||||||||| ||| |||||||||||    
T  51814570 gaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 33700773 - 33700847
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtggg 149  Q
    ||||||||| ||||||||  |||||| |||||||||| | | ||||||||||||||  ||| ||| |||||||||    
T  33700773 gaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 37400350 - 37400272
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttca 153  Q
    ||||||||| |||||||| ||||||| |||||||  | |||| ||||||||||||| |||  ||| |||||| ||||||    
T  37400350 gaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggttca 37400272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 43446039 - 43445981
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    ||||||||||||||||||  |||||| |||||||||  || |||||||||| |||||||    
T  43446039 gaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaacaccatca 43445981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 45235389 - 45235455
Alignment:
Q  85 tgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||| ||| |||||| ||||||||||  ||||||| |||||||||||||  ||| |||||||||||    
T  45235389 tgagatctcgaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggtt 45235455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 52336775 - 52336829
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    |||||||| ||||| || ||||||| |||||||||| | ||||||||||||||||    
T  52336775 aatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaatacca 52336829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 15786320 - 15786373
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatac 128  Q
    ||||||||| ||||||||  |||||| |||||||||| | ||||||||||||||    
T  15786320 gaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 36124899 - 36124854
Alignment:
Q  85 tgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    |||||||||||||||| |||||||| | ||||||||| ||||||||    
T  36124899 tgagacctcaaggaggagcacactctcaggtcccaagtcaatacca 36124854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 4566624 - 4566548
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| |||||||   |||||| |||||||||| ||| ||||||||||| ||  ||| ||| |||||||||||    
T  4566624 gaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 16169978 - 16170054
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||| ||||  ||||||  ||||||||| ||||||||| |||||||| ||||  || |||||||||||    
T  16169978 gaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 16679146 - 16679182
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacga 76  Q
    |||||||||||||||||||||| |||||||| |||||    
T  16679146 ttgaagaagctaaattagtccatttaaattggcacga 16679182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 21547480 - 21547556
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||| ||||| |||||| |||| |||||  |||||||||||||||||  ||| ||| |||||| ||||    
T  21547480 gaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 24047102 - 24047158
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccat 131  Q
    ||||||||| ||| ||||| |||||| ||||||||||  ||| ||||||||||||||    
T  24047102 gaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaataccat 24047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 31605848 - 31605908
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    ||||||||| ||||||||  |||||| ||||||| |  ||||||||||||| |||||||||    
T  31605848 gaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacaccatcagg 31605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 52116801 - 52116857
Alignment:
Q  95 aggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||| ||||||||||  ||||||||||||||||| |||| ||| |||| ||||||    
T  52116801 aggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 48772013 - 48771938
Alignment:
Q  76 aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||||| |||||||||||||||| |||||||||| | |||||||||||||||| || | ||| |||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 2446425 - 2446308
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| ||||| | |||      ||||||||| ||||| ||| |||||| ||||||||||  ||||||||||||||||||||    
T  2446425 ttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatca 2446326  T
Q  134 ggacaatccaagtgggtt 151  Q
    |  ||| |||||||||||    
T  2446325 gaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 23301561 - 23301678
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    ||||||||| |||||||||||||| |||||  |||      ||||| ||| |||||||||||||||| ||||||||||  |||||||| |||||||| ||    
T  23301561 ttgaagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccacca 23301660  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  23301661 ggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 25590728 - 25590611
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacg------aatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||| ||||||||||       ||||||||  |||||||| |||||| |||||||||| | || ||||||||||||| ||    
T  25590728 ttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaaca 25590629  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  25590628 ggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 5934235 - 5934147
Alignment:
Q  43 aagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaa 125  Q
    ||||| |||||||||||||| |||||||||||      ||||||||||||| |||||||||||| |||||||||| | |||||||||||    
T  5934235 aagaaactaaattagtccacctaaattgacaccagagggaatcgaacatgaaacctcaaggaggagcacactcccagatcccaagccaa 5934147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 7309472 - 7309396
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac-----gaatcgaacatgagacctcaaggaggggcacactccc 111  Q
    |||||||||||||||||| ||||||||||||||||     ||||||||| ||||||||| |||||| ||||||||||    
T  7309472 ttgaagaagctaaattagcccacttaaattgacacggagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 26459410 - 26459486
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  26459410 gaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 22035513 - 22035424
Alignment:
Q  42 gaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaa 125  Q
    |||||||||||||||||||||||||||||||||      ||||||||| || | |||| |||||| |||||||| | |||||||||||||    
T  22035513 gaagaagctaaattagtccacttaaattgacacaggagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaagccaa 22035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 30579452 - 30579335
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacga------atcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| ||||||| ||| |      ||||||| ||||||||  |||||| | |||||||| |||| ||||||||||||| ||    
T  30579452 ttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccacca 30579353  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  30579352 ggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 15905674 - 15905746
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgg 148  Q
    ||||||||| |||||||| ||||||| |||||||||| |||||||||||||||||  |||| ||| ||||||||    
T  15905674 gaatcgaacctgagacct-aaggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 39499719 - 39499796
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttc 152  Q
    |||||||||||||||||| || ||||  ||||||| | ||||||||||||||||||  ||| ||| ||||||||||||    
T  39499719 gaatcgaacatgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggttc 39499796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 22760939 - 22760863
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||||| ||||||||| |||||||| |||  ||| |||||||||||    
T  22760939 gaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 3280495 - 3280561
Alignment:
Q  85 tgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||| || | ||| |||||||||||    
T  3280495 tgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgggtt 3280561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 20335831 - 20335885
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacc 129  Q
    ||||||||| ||||||||| |||||| ||||||||||  ||||||||||||||||    
T  20335831 gaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacc 20335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 43591024 - 43590907
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| |||| | ||||| |||      ||||||||| |||||| |  |||||| ||||||||||  ||||||||||||||||| ||    
T  43591024 ttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccacca 43590925  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||| ||||||    
T  43590924 ggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 7801253 - 7801180
Alignment:
Q  78 tcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||| ||||||||  | |||| |||||||||| ||||||||| |||||||| |||| ||| |||||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 20952169 - 20952222
Alignment:
Q  95 aggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgg 148  Q
    |||||| |||||||||| |||||||| |||||||||||||| ||| ||||||||    
T  20952169 aggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 45228984 - 45229080
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    |||||||||||||||||| ||||||||||||||||      ||||||||| | | |||||||| ||  |||||||||  |||||||| |||||||||    
T  45228984 ttgaagaagctaaattagcccacttaaattgacactggagagaatcgaacctaaaacctcaagaagaagcacactcctaggtcccaaaccaatacca 45229080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 23552194 - 23552118
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||||| ||||||||| ||||| ||  ||| ||| |||||||||||    
T  23552194 gaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 25021355 - 25021411
Alignment:
Q  95 aggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||| |||||||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  25021355 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 39631920 - 39631844
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| ||  |||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  39631920 gaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 43215260 - 43215184
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| ||||||||  |||||| |||||||||  ||||||||||||||||||  ||  ||| |||||||||||    
T  43215260 gaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 7721445 - 7721390
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    ||||||||||||||||||  |||||| | |||||||| |||||||| |||||||||    
T  7721445 gaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaatacca 7721390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 28236592 - 28236639
Alignment:
Q  86 gagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||| |||||| || ||||||| |||||||||||||||||||||    
T  28236592 gagacctcgaggaggagcgcactcccaggtcccaagccaataccatca 28236639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 5579244 - 5579310
Alignment:
Q  85 tgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||  |||||| |||||||||  ||||||||||||| |||| |||| ||| |||||||||||    
T  5579244 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 5668530 - 5668627
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccat 131  Q
    |||||||||||||||||| |||| |||||| || |      ||||||| | ||||||||| |||||| ||||||| ||  ||||||||||||||||||    
T  5668530 ttgaagaagctaaattagcccacataaattaactccggagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaataccat 5668627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 11720919 - 11721020
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    |||||||||||||||||| ||||  |||||| |||      ||||||||  ||| |||| ||||||| ||||| |||| |||||||||||||||||| ||    
T  11720919 ttgaagaagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccacca 11721018  T
Q  134 gg 135  Q
    ||    
T  11721019 gg 11721020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 21854604 - 21854550
Alignment:
Q  95 aggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtggg 149  Q
    |||||| |||||||||| | |||| |||||||||||||||| ||| |||||||||    
T  21854604 aggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 42836028 - 42836077
Alignment:
Q  102 gcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    |||||||||| ||||||||||||||||||  ||| ||| |||||||||||    
T  42836028 gcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 30442564 - 30442488
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggtt 151  Q
    ||||||||| | ||||||  |||||| ||| |||||| ||||||||||||||||||   || ||| |||||||||||    
T  30442564 gaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 6881 - 6974
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacacga---atcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    |||||||||||||||||| ||||| |||||||||| |   ||||||| |||||| |  |||||| ||||||||||  |||||||||||||||||    
T  6881 ttgaagaagctaaattagcccactcaaattgacaccagagatcgaacctgagactttgaggaggagcacactccccagtcccaagccaatacca 6974  T

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Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 11604 - 11544
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    ||||||||| ||||||||| |||||| |||||||||| | |||||||||||||||| ||||    
T  11604 gaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccagg 11544  T

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Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 112396 - 112282
Alignment:
Q  43 aagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagga 136  Q
    |||||||||||||||||||| ||||||| |||      ||||||||| | ||||||||| ||||  ||||||||| | | |||||||||||| | ||||     
T  112396 aagaagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggc 112297  T
Q  137 caatccaagtgggtt 151  Q
    ||| |||||||||||    
T  112296 caacccaagtgggtt 112282  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 45759 - 45812
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatac 128  Q
    ||||||||||||||||||||||||||  ||||||||  ||||||||| ||||||    
T  45759 gaatcgaacatgagacctcaaggaggaacacactcctaggtcccaaggcaatac 45812  T

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Target: scaffold0101 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 43332 - 43387
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaatacca 130  Q
    |||||||||||||||||| ||| |||  |||||||||  |||||||||||||||||    
T  43332 gaatcgaacatgagaccttaagaaggaacacactcccaagtcccaagccaatacca 43387  T

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Target: scaffold0517 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 7726 - 7804
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgggttca 153  Q
    ||||||||| |||||||| ||||||| |||||||  | |||| ||||||||||||| |||  ||| |||||| ||||||    
T  7726 gaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggttca 7804  T

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Target: scaffold0417 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 10336 - 10219
Alignment:
Q  40 ttgaagaagctaaattagtccacttaaattgacac------gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatca 133  Q
    ||||| |||||||||||| |||||||||||| ||       ||||| ||| | |||| || ||||| ||| ||||||| | ||||||||||||| |||||    
T  10336 ttgaataagctaaattagcccacttaaattggcatttgagagaatcaaacttaagacttcgaggagaggcgcactcccagatcccaagccaatatcatca 10237  T
Q  134 ggacaatccaagtgggtt 151  Q
    || ||| |||||||||||    
T  10236 ggccaacccaagtgggtt 10219  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 840 - 900
Alignment:
Q  75 gaatcgaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcagg 135  Q
    ||||||||| |||||| || |||||| ||||| |||| | |||||||||||||||| ||||    
T  840 gaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccagg 900  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 94976 - 95044
Alignment:
Q  80 gaacatgagacctcaaggaggggcacactcccgggtcccaagccaataccatcaggacaatccaagtgg 148  Q
    |||| ||||||||  |||||| |||||||||| ||| ||||||||||||||  ||| ||| ||||||||    
T  94976 gaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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