View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3288-Insertion-13 (Length: 409)

Name: NF3288-Insertion-13
Description: NF3288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3288-Insertion-13
NF3288-Insertion-13
[»] chr6 (31 HSPs)
chr6 (7-175)||(31037524-31037692)
chr6 (192-400)||(13136402-13136606)
chr6 (217-393)||(17895126-17895301)
chr6 (201-328)||(13939782-13939911)
chr6 (176-409)||(24412074-24412304)
chr6 (176-293)||(10471438-10471556)
chr6 (176-293)||(10464916-10465034)
chr6 (176-293)||(27766673-27766791)
chr6 (176-272)||(29920863-29920961)
chr6 (175-298)||(23022014-23022139)
chr6 (176-293)||(17208458-17208576)
chr6 (176-249)||(19097471-19097545)
chr6 (176-302)||(24361932-24362060)
chr6 (167-249)||(29158420-29158503)
chr6 (176-302)||(24368507-24368635)
chr6 (176-293)||(22405874-22405993)
chr6 (238-292)||(19301318-19301372)
chr6 (232-297)||(10583504-10583569)
chr6 (217-298)||(12447907-12447988)
chr6 (231-292)||(22799189-22799250)
chr6 (176-293)||(8070417-8070537)
chr6 (341-384)||(19285714-19285756)
chr6 (341-391)||(21794031-21794081)
chr6 (233-292)||(24720039-24720098)
chr6 (375-409)||(8070300-8070334)
chr6 (246-292)||(8717852-8717898)
chr6 (176-292)||(30800163-30800278)
chr6 (369-406)||(7237955-7237992)
chr6 (235-292)||(19472997-19473054)
chr6 (235-292)||(21965784-21965841)
chr6 (235-292)||(24412968-24413025)
[»] chr3 (47 HSPs)
chr3 (176-393)||(54092308-54092522)
chr3 (231-393)||(19344810-19344969)
chr3 (176-409)||(16832572-16832802)
chr3 (176-297)||(12725843-12725965)
chr3 (176-297)||(15374004-15374125)
chr3 (172-298)||(8374715-8374841)
chr3 (175-297)||(9692131-9692251)
chr3 (232-335)||(46071779-46071881)
chr3 (174-292)||(30597571-30597690)
chr3 (176-292)||(32388725-32388842)
chr3 (177-298)||(30126180-30126302)
chr3 (176-273)||(48775382-48775481)
chr3 (176-302)||(2499776-2499905)
chr3 (176-293)||(9772641-9772758)
chr3 (176-249)||(38742226-38742300)
chr3 (321-393)||(20377861-20377932)
chr3 (259-333)||(10609350-10609425)
chr3 (176-293)||(12272134-12272252)
chr3 (217-292)||(13037603-13037678)
chr3 (217-292)||(13043968-13044043)
chr3 (321-391)||(49162689-49162758)
chr3 (232-292)||(31691322-31691383)
chr3 (232-292)||(31942834-31942895)
chr3 (175-297)||(49398789-49398915)
chr3 (176-297)||(8584028-8584153)
chr3 (176-297)||(14012833-14012958)
chr3 (176-297)||(14089250-14089375)
chr3 (233-292)||(15935679-15935738)
chr3 (233-292)||(15937529-15937588)
chr3 (232-333)||(18757652-18757755)
chr3 (176-292)||(18913398-18913517)
chr3 (341-391)||(24123895-24123945)
chr3 (176-302)||(47120448-47120574)
chr3 (176-302)||(47127816-47127942)
chr3 (264-302)||(10381279-10381317)
chr3 (264-302)||(10409932-10409970)
chr3 (176-292)||(54833936-54834051)
chr3 (232-292)||(13303923-13303984)
chr3 (232-292)||(13314599-13314660)
chr3 (232-292)||(15518499-15518560)
chr3 (236-293)||(16332319-16332376)
chr3 (232-273)||(53874208-53874249)
chr3 (232-292)||(11888760-11888820)
chr3 (232-292)||(12148178-12148238)
chr3 (232-292)||(12152304-12152364)
chr3 (175-214)||(20378048-20378088)
chr3 (368-408)||(48775242-48775282)
[»] chr4 (47 HSPs)
chr4 (232-400)||(20888714-20888877)
chr4 (232-400)||(20894333-20894496)
chr4 (202-388)||(42219791-42219978)
chr4 (176-297)||(21880863-21880985)
chr4 (176-293)||(2973415-2973533)
chr4 (176-292)||(41405316-41405433)
chr4 (176-293)||(19129043-19129160)
chr4 (176-273)||(33198284-33198382)
chr4 (191-384)||(31664343-31664539)
chr4 (175-249)||(11209342-11209417)
chr4 (176-249)||(5938187-5938261)
chr4 (176-249)||(11203187-11203261)
chr4 (176-249)||(35463368-35463442)
chr4 (176-293)||(13481571-13481690)
chr4 (176-249)||(21396070-21396145)
chr4 (176-293)||(34771489-34771608)
chr4 (176-293)||(43251413-43251532)
chr4 (176-273)||(45143280-45143379)
chr4 (176-273)||(45152049-45152148)
chr4 (176-249)||(7355517-7355591)
chr4 (176-249)||(7358510-7358584)
chr4 (176-249)||(11936359-11936432)
chr4 (176-249)||(36036108-36036182)
chr4 (176-302)||(44663695-44663824)
chr4 (176-302)||(3267313-3267441)
chr4 (375-409)||(13481454-13481488)
chr4 (176-302)||(44657766-44657895)
chr4 (176-293)||(47873127-47873244)
chr4 (176-302)||(50081524-50081653)
chr4 (232-292)||(18260735-18260795)
chr4 (232-292)||(18270698-18270758)
chr4 (232-292)||(30873256-30873316)
chr4 (321-393)||(46045464-46045535)
chr4 (321-391)||(899082-899151)
chr4 (341-391)||(33096535-33096585)
chr4 (230-292)||(14484963-14485025)
chr4 (234-292)||(14992298-14992356)
chr4 (234-292)||(15005645-15005703)
chr4 (234-292)||(30237191-30237249)
chr4 (375-409)||(43251615-43251649)
chr4 (232-297)||(18170369-18170434)
chr4 (232-273)||(42956734-42956775)
chr4 (232-273)||(45960460-45960501)
chr4 (175-302)||(6457867-6457994)
chr4 (217-273)||(16484034-16484090)
chr4 (368-408)||(45143140-45143180)
chr4 (368-408)||(45151909-45151949)
[»] scaffold0093 (1 HSPs)
scaffold0093 (233-393)||(24042-24197)
[»] scaffold0310 (3 HSPs)
scaffold0310 (176-409)||(7037-7267)
scaffold0310 (176-270)||(12248-12343)
scaffold0310 (360-409)||(12408-12456)
[»] scaffold1845 (1 HSPs)
scaffold1845 (233-393)||(117-272)
[»] chr5 (41 HSPs)
chr5 (176-409)||(7774250-7774480)
chr5 (232-391)||(28260486-28260645)
chr5 (176-293)||(16775773-16775891)
chr5 (201-333)||(24056951-24057084)
chr5 (217-324)||(25419190-25419299)
chr5 (216-333)||(39609545-39609664)
chr5 (175-297)||(26649717-26649841)
chr5 (175-297)||(26921302-26921426)
chr5 (175-273)||(20989634-20989733)
chr5 (176-293)||(29747270-29747388)
chr5 (176-292)||(5342419-5342536)
chr5 (201-298)||(19361988-19362086)
chr5 (176-292)||(18941854-18941970)
chr5 (176-273)||(19802581-19802680)
chr5 (174-249)||(33535605-33535681)
chr5 (176-249)||(596533-596607)
chr5 (176-273)||(42242473-42242573)
chr5 (176-293)||(22500246-22500365)
chr5 (176-293)||(22506824-22506943)
chr5 (176-302)||(5453746-5453874)
chr5 (175-293)||(18565891-18566011)
chr5 (217-297)||(20937026-20937106)
chr5 (217-273)||(22313516-22313572)
chr5 (232-292)||(23433511-23433571)
chr5 (232-292)||(23444876-23444936)
chr5 (349-393)||(29747171-29747215)
chr5 (176-302)||(10685413-10685542)
chr5 (375-409)||(22500451-22500485)
chr5 (375-409)||(22507029-22507063)
chr5 (342-409)||(596704-596771)
chr5 (233-293)||(37565423-37565483)
chr5 (176-297)||(1858240-1858365)
chr5 (341-391)||(21676119-21676169)
chr5 (233-292)||(25013075-25013134)
chr5 (347-402)||(33535785-33535839)
chr5 (375-409)||(18566094-18566128)
chr5 (375-405)||(19507545-19507575)
chr5 (254-292)||(20831178-20831216)
chr5 (230-292)||(21905961-21906023)
chr5 (235-297)||(23082451-23082515)
chr5 (217-249)||(19507385-19507417)
[»] chr8 (38 HSPs)
chr8 (176-297)||(43686715-43686837)
chr8 (176-333)||(11393236-11393395)
chr8 (175-293)||(14417265-14417384)
chr8 (176-273)||(29327419-29327518)
chr8 (176-249)||(7004841-7004915)
chr8 (176-249)||(16258904-16258978)
chr8 (176-249)||(16267622-16267696)
chr8 (176-249)||(23116517-23116591)
chr8 (166-249)||(40145039-40145123)
chr8 (176-249)||(14747247-14747321)
chr8 (176-293)||(20890780-20890898)
chr8 (176-258)||(29299817-29299900)
chr8 (330-391)||(27889410-27889471)
chr8 (330-391)||(27948068-27948129)
chr8 (235-292)||(29644249-29644306)
chr8 (176-297)||(3225366-3225488)
chr8 (375-409)||(6587635-6587669)
chr8 (232-292)||(20984514-20984575)
chr8 (233-293)||(25702251-25702311)
chr8 (175-297)||(30767684-30767810)
chr8 (176-293)||(3696937-3697055)
chr8 (234-293)||(20005800-20005859)
chr8 (235-297)||(21300832-21300895)
chr8 (175-297)||(22011787-22011909)
chr8 (341-391)||(23824562-23824612)
chr8 (175-249)||(27345022-27345097)
chr8 (191-258)||(29306363-29306430)
chr8 (347-402)||(40144881-40144935)
chr8 (372-406)||(4979828-4979862)
chr8 (230-292)||(25625436-25625498)
chr8 (375-409)||(27345225-27345259)
chr8 (176-240)||(6587429-6587494)
chr8 (174-302)||(6678150-6678278)
chr8 (232-297)||(19852938-19853003)
chr8 (232-297)||(19858974-19859039)
chr8 (232-292)||(21686786-21686846)
chr8 (232-292)||(21691110-21691170)
chr8 (139-175)||(33537207-33537243)
[»] chr7 (43 HSPs)
chr7 (176-297)||(30272465-30272587)
chr7 (176-391)||(16844424-16844638)
chr7 (176-293)||(12460849-12460967)
chr7 (175-292)||(13018867-13018985)
chr7 (176-292)||(13025575-13025692)
chr7 (175-292)||(15454731-15454849)
chr7 (176-292)||(19438653-19438770)
chr7 (259-384)||(23518222-23518347)
chr7 (176-273)||(15811437-15811535)
chr7 (171-293)||(17469008-17469130)
chr7 (171-293)||(17584084-17584206)
chr7 (176-249)||(2389342-2389416)
chr7 (176-249)||(13454543-13454617)
chr7 (176-249)||(21756645-21756719)
chr7 (176-249)||(37379238-37379312)
chr7 (176-249)||(49149207-49149281)
chr7 (175-302)||(13594025-13594155)
chr7 (175-293)||(20020414-20020532)
chr7 (230-292)||(13019095-13019157)
chr7 (176-249)||(25157775-25157849)
chr7 (342-409)||(49149379-49149446)
chr7 (176-297)||(11339098-11339221)
chr7 (176-293)||(11835474-11835593)
chr7 (375-409)||(20020297-20020331)
chr7 (176-292)||(46682864-46682981)
chr7 (176-302)||(2438206-2438334)
chr7 (176-297)||(4279281-4279406)
chr7 (347-402)||(13454385-13454439)
chr7 (217-292)||(16074636-16074711)
chr7 (176-297)||(19615613-19615738)
chr7 (347-402)||(21756824-21756878)
chr7 (232-297)||(3327182-3327248)
chr7 (176-292)||(12546565-12546682)
chr7 (234-292)||(12694045-12694103)
chr7 (234-292)||(15098624-15098682)
chr7 (369-406)||(2026863-2026900)
chr7 (176-295)||(11900364-11900485)
chr7 (364-409)||(17468885-17468930)
chr7 (364-409)||(17584284-17584329)
chr7 (217-293)||(46624286-46624363)
chr7 (259-295)||(20328912-20328948)
chr7 (176-302)||(26114490-26114618)
chr7 (176-302)||(26121091-26121219)
[»] chr1 (39 HSPs)
chr1 (176-389)||(21920142-21920352)
chr1 (176-298)||(36614333-36614458)
chr1 (176-290)||(24241155-24241270)
chr1 (176-293)||(21948757-21948875)
chr1 (176-293)||(21962318-21962436)
chr1 (176-293)||(24849415-24849533)
chr1 (176-293)||(36917085-36917202)
chr1 (176-292)||(49327374-49327491)
chr1 (179-298)||(43087759-43087880)
chr1 (175-249)||(38133543-38133618)
chr1 (176-297)||(20397578-20397700)
chr1 (176-290)||(29152072-29152187)
chr1 (176-302)||(1527472-1527601)
chr1 (176-302)||(36212683-36212812)
chr1 (176-249)||(37674645-37674718)
chr1 (176-249)||(37681338-37681411)
chr1 (235-292)||(19960607-19960664)
chr1 (178-293)||(42625471-42625588)
chr1 (176-293)||(52990029-52990148)
chr1 (375-409)||(20292185-20292219)
chr1 (375-409)||(20298863-20298897)
chr1 (230-292)||(31928083-31928145)
chr1 (176-302)||(36213542-36213671)
chr1 (375-409)||(52990231-52990265)
chr1 (282-409)||(29597425-29597548)
chr1 (232-279)||(4230561-4230608)
chr1 (341-391)||(21541446-21541496)
chr1 (341-391)||(24076885-24076935)
chr1 (176-297)||(42096637-42096762)
chr1 (321-391)||(47483645-47483714)
chr1 (234-292)||(11141677-11141735)
chr1 (176-249)||(20291982-20292056)
chr1 (176-292)||(20942524-20942642)
chr1 (234-292)||(21697583-21697641)
chr1 (230-292)||(30492176-30492238)
chr1 (247-292)||(23711933-23711978)
chr1 (364-409)||(36917280-36917325)
chr1 (176-297)||(20639660-20639783)
chr1 (232-292)||(21411356-21411416)
[»] scaffold0363 (1 HSPs)
scaffold0363 (175-293)||(1335-1454)
[»] scaffold1251 (1 HSPs)
scaffold1251 (176-297)||(1638-1760)
[»] chr2 (21 HSPs)
chr2 (176-293)||(11465454-11465571)
chr2 (201-333)||(32912138-32912271)
chr2 (176-293)||(45027841-45027959)
chr2 (175-249)||(27036552-27036627)
chr2 (176-249)||(24427592-24427666)
chr2 (321-393)||(25590729-25590799)
chr2 (191-249)||(2386672-2386730)
chr2 (176-297)||(199959-200084)
chr2 (341-391)||(36800052-36800103)
chr2 (176-297)||(6745058-6745183)
chr2 (176-297)||(17967006-17967131)
chr2 (180-293)||(22013811-22013926)
chr2 (176-293)||(35244708-35244827)
chr2 (341-391)||(43692883-43692933)
chr2 (375-409)||(22013696-22013730)
chr2 (232-292)||(22859747-22859807)
chr2 (232-292)||(23263429-23263488)
chr2 (232-292)||(23268645-23268704)
chr2 (232-292)||(24644247-24644307)
chr2 (232-292)||(25266753-25266813)
chr2 (235-302)||(28292086-28292154)
[»] scaffold0214 (2 HSPs)
scaffold0214 (176-293)||(15926-16043)
scaffold0214 (176-293)||(28422-28539)
[»] scaffold0009 (2 HSPs)
scaffold0009 (176-298)||(252890-253013)
scaffold0009 (201-273)||(246375-246447)
[»] scaffold1517 (1 HSPs)
scaffold1517 (191-293)||(542-644)
[»] scaffold0191 (1 HSPs)
scaffold0191 (176-293)||(6204-6322)
[»] scaffold0088 (1 HSPs)
scaffold0088 (176-293)||(31183-31301)
[»] scaffold0075 (2 HSPs)
scaffold0075 (176-293)||(24350-24469)
scaffold0075 (377-409)||(24554-24586)
[»] scaffold0560 (1 HSPs)
scaffold0560 (175-293)||(1744-1865)
[»] scaffold0113 (4 HSPs)
scaffold0113 (174-249)||(14485-14562)
scaffold0113 (176-249)||(18497-18572)
scaffold0113 (354-393)||(14671-14710)
scaffold0113 (354-393)||(18681-18720)
[»] scaffold0188 (2 HSPs)
scaffold0188 (176-293)||(5372-5491)
scaffold0188 (375-409)||(5257-5291)
[»] scaffold0118 (2 HSPs)
scaffold0118 (176-293)||(1733-1852)
scaffold0118 (375-409)||(1935-1969)
[»] scaffold0001 (3 HSPs)
scaffold0001 (176-293)||(513266-513385)
scaffold0001 (176-293)||(519683-519802)
scaffold0001 (232-292)||(452412-452472)
[»] scaffold1752 (1 HSPs)
scaffold1752 (176-249)||(281-355)
[»] scaffold1426 (1 HSPs)
scaffold1426 (176-249)||(601-675)
[»] scaffold0320 (1 HSPs)
scaffold0320 (176-249)||(200-274)
[»] scaffold0130 (1 HSPs)
scaffold0130 (230-292)||(12113-12175)
[»] scaffold0103 (2 HSPs)
scaffold0103 (176-245)||(24589-24659)
scaffold0103 (375-409)||(24423-24457)
[»] scaffold0329 (1 HSPs)
scaffold0329 (178-297)||(17387-17507)
[»] scaffold0279 (1 HSPs)
scaffold0279 (176-293)||(6445-6563)
[»] scaffold0266 (2 HSPs)
scaffold0266 (180-293)||(14412-14527)
scaffold0266 (375-409)||(14613-14647)
[»] scaffold0026 (1 HSPs)
scaffold0026 (234-292)||(28600-28658)
[»] scaffold2015 (1 HSPs)
scaffold2015 (233-298)||(1092-1157)
[»] scaffold1433 (1 HSPs)
scaffold1433 (176-251)||(278-355)
[»] scaffold0751 (1 HSPs)
scaffold0751 (231-292)||(6500-6561)
[»] scaffold0211 (1 HSPs)
scaffold0211 (232-297)||(8776-8841)
[»] scaffold0081 (1 HSPs)
scaffold0081 (232-293)||(56600-56661)
[»] scaffold0022 (2 HSPs)
scaffold0022 (376-409)||(103798-103831)
scaffold0022 (176-293)||(103596-103715)
[»] scaffold0011 (3 HSPs)
scaffold0011 (176-292)||(146407-146523)
scaffold0011 (176-297)||(175295-175420)
scaffold0011 (232-292)||(198107-198168)
[»] scaffold0007 (1 HSPs)
scaffold0007 (232-293)||(208233-208294)
[»] scaffold1488 (1 HSPs)
scaffold1488 (175-297)||(77-203)
[»] scaffold0078 (1 HSPs)
scaffold0078 (233-297)||(18094-18158)
[»] scaffold1711 (1 HSPs)
scaffold1711 (234-297)||(2-65)
[»] scaffold0708 (1 HSPs)
scaffold0708 (176-297)||(166-291)
[»] scaffold0661 (1 HSPs)
scaffold0661 (175-292)||(4766-4885)
[»] scaffold0324 (1 HSPs)
scaffold0324 (230-293)||(7788-7851)
[»] scaffold0260 (1 HSPs)
scaffold0260 (177-302)||(14076-14203)
[»] scaffold0244 (1 HSPs)
scaffold0244 (217-292)||(20069-20144)
[»] scaffold0104 (1 HSPs)
scaffold0104 (341-391)||(22694-22744)
[»] scaffold0060 (1 HSPs)
scaffold0060 (321-391)||(40768-40837)
[»] scaffold0050 (1 HSPs)
scaffold0050 (176-297)||(87128-87253)
[»] scaffold0031 (1 HSPs)
scaffold0031 (321-391)||(74747-74816)
[»] scaffold0002 (1 HSPs)
scaffold0002 (263-333)||(369907-369978)
[»] scaffold0395 (1 HSPs)
scaffold0395 (234-292)||(4769-4827)
[»] scaffold0355 (1 HSPs)
scaffold0355 (176-297)||(2184-2308)
[»] scaffold0298 (1 HSPs)
scaffold0298 (232-297)||(1315-1381)
[»] scaffold0016 (1 HSPs)
scaffold0016 (176-297)||(173700-173821)
[»] scaffold1061 (1 HSPs)
scaffold1061 (176-292)||(675-791)
[»] scaffold0554 (1 HSPs)
scaffold0554 (214-251)||(673-710)
[»] scaffold0054 (1 HSPs)
scaffold0054 (235-292)||(62458-62515)
[»] scaffold0053 (1 HSPs)
scaffold0053 (235-292)||(61689-61746)
[»] scaffold0827 (1 HSPs)
scaffold0827 (232-292)||(1584-1644)
[»] scaffold0516 (1 HSPs)
scaffold0516 (232-292)||(5569-5629)
[»] scaffold0326 (2 HSPs)
scaffold0326 (175-292)||(6088-6208)
scaffold0326 (175-292)||(13990-14110)
[»] scaffold0190 (2 HSPs)
scaffold0190 (340-391)||(21105-21156)
scaffold0190 (340-391)||(27944-27995)
[»] scaffold0106 (1 HSPs)
scaffold0106 (175-293)||(37718-37840)
[»] scaffold0102 (2 HSPs)
scaffold0102 (232-292)||(29241-29301)
scaffold0102 (232-292)||(44024-44084)
[»] scaffold0068 (1 HSPs)
scaffold0068 (233-293)||(66019-66079)
[»] scaffold0028 (1 HSPs)
scaffold0028 (232-292)||(64382-64442)
[»] scaffold0025 (1 HSPs)
scaffold0025 (232-292)||(76165-76225)


Alignment Details
Target: chr6 (Bit Score: 161; Significance: 1e-85; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 7 - 175
Target Start/End: Original strand, 31037524 - 31037692
Alignment:
Q  7 aggtattgctgtctttgtttaaatcttcaaaataaataaataaataagtgattggtggacatggacaaaaccagtttgctacaacaacaactttgcttgc 106  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31037524 aggtattgctgtctctgtttaaatcttcaaaataaataaataaataaatgattggtggacatggacaaaaccagtttgctacaacaacaactttgcttgc 31037623  T
Q  107 gcaaagaagctatgaattaaaactagcaatttatttatatagaattaaaactaataaaagcatgatata 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31037624 gcaaagaagctatgaattaaaactagcaatttatttatatagaattaaaactaataaaagcatgatata 31037692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 192 - 400
Target Start/End: Complemental strand, 13136606 - 13136402
Alignment:
Q  192 caaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaa 291  Q
    |||||||| |||||||||| ||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  13136606 caaaagtaattaaatataacataatcatcagagttaagcaccaaacggacatgctacactacattttaaaatttcttaaatagcatatgaaactatttaa 13136507  T
Q  292 ttaaactactttc-gaacatcattaaacttgcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcc 390  Q
    |||||| ||||||  ||||||||| ||||||||||||||||||||    ||||||||||||| || |||||||    ||| ||||||||||||| |||||    
T  13136506 ttaaacaactttcaaaacatcatt-aacttgcagcggattattat----caaacatcaacaattggttaaaactctaaaacaatatcttggcataaagcc 13136412  T
Q  391 taatcaacaa 400  Q
    | | ||||||    
T  13136411 tcaacaacaa 13136402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 217 - 393
Target Start/End: Complemental strand, 17895301 - 17895126
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttcgaacatcattaa 316  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| |||| | ||||||||| |    
T  17895301 catcagagttaagcaccaaacgggcatgctacactacattttaaaatttcttaaatagtatatgaaactatttaattaaacaacttccaaacatcattta 17895202  T
Q  317 acttgcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |   |||||||| | ||||||||||||| |||||||| | ||||| |||| ||| || |||||||||| ||||||||    
T  17895201 aacagcagcggaatgttattcaacaaacgtcaacaacag-ttaaatcctcgaaacaacatcttggcataaagcctaa 17895126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 201 - 328
Target Start/End: Original strand, 13939782 - 13939911
Alignment:
Q  201 ttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaacta 299  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| |    
T  13939782 ttaaatataaaataatcatcagagttaagcaccaaacgggcatgctacactacattttcaaaatttcttaaatagcatatgaaactatttaattaaacaa 13939881  T
Q  300 ctttc-gaacatcattaaacttgcagcgga 328  Q
    |||||  ||||||||||| |||||||||||    
T  13939882 ctttcaaaacatcattaatcttgcagcgga 13939911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 176 - 409
Target Start/End: Complemental strand, 24412304 - 24412074
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||||| |||  ||| ||||||| ||||||||||| ||||||||||||| ||| |||||| ||||||||     
T  24412304 tgtaacaccccgttacccaaaagtaattaaatataacataaacatgagagttaagcaccaaacggacatgctacactacatttcaaaattccttaaatag 24412205  T
Q  275 catatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattatt--attcaacaaacatcaacaactgtttaaaacctccaaata 372  Q
    |||||  |||||||||| ||||| ||| || |||||||   |||||||| |||| ||||   |||    ||||||||||| | |||||| | ||  ||||    
T  24412204 catatataactatttaaataaacaactgtcaaacatcaaataacttgcaacggaatatttgtttc----aacatcaacaattatttaaaccttc--aata 24412111  T
Q  373 atatcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  24412110 atatcttggcattaagcctaaacaacaataaatcaac 24412074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 10471556 - 10471438
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||||||| ||| |||||||||||||||     
T  10471556 tgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcatcaaacgggcatgctacactacatttcaaaatttcttaaatag 10471457  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  10471456 aaaataaaactatttaatt 10471438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 10465034 - 10464916
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||||||| ||| |||||||||||||||     
T  10465034 tgtaacaccccgctacccaaaagtaattaaatataaaatattcatcagagtaattcatcaaacgggcatgctacactacatttcaaaatttcttaaatag 10464935  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  10464934 aaaataaaactatttaatt 10464916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 27766673 - 27766791
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||| ||| ||||||| |||||||     
T  27766673 tgtaacacaccgttacccaaaagtatttaaatataaaatattcatcagagtaattcaccaaacggacatgctacactacatttcaaaattttttaaatag 27766772  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  27766773 aaaataaaactatttaatt 27766791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 29920863 - 29920961
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcacc-aaacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |  |||| |||||||||||||||||||| ||| ||||||||||||||    
T  29920863 tgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaaacgggcatgctacactacatttcaaaatttcttaaat 29920961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 298
Target Start/End: Complemental strand, 23022139 - 23022014
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaat 272  Q
    |||||||||||||||| || |||  | ||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||| ||||||||||||||    
T  23022139 atgtaacaccccgttatcccaaaacaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacattttcaaaatttcttaaat 23022040  T
Q  273 aacatatgaaactatttaattaaact 298  Q
    |  | || | |||||||||| |||||    
T  23022039 aggaaataatactatttaataaaact 23022014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 17208576 - 17208458
Alignment:
Q  176 tgtaacaccccgttaccaaaag-tatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||| |||| |||  || |||||||||| ||| |||||||||||| ||||||||||| ||||||||||||| ||| |||||| ||||||||     
T  17208576 tgtaacaccccgctacccaaatataattaaatataacataatcatcagagttaagcaccaaacggacatgctacactacatttcaaaattccttaaatag 17208477  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  17208476 aaaataaaactatttaatt 17208458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 19097545 - 19097471
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  |||||| ||||||||||| |||||||||||||||||||||    
T  19097545 tgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagttaagcaccaaacgggcatgctaca 19097471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 24361932 - 24362060
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||||| |||||||  ||||||  ||||| |||||||||| |  ||||||| |||| |||||||| | |  | | ||| ||||||||||    
T  24361932 tgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccaaaacgggtatgctacattgcaatatcaaaattcttaaata 24362031  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
     ||||||||||||||||||||||| ||||    
T  24362032 gcatatgaaactatttaattaaaccactt 24362060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 29158420 - 29158503
Alignment:
Q  167 catgatatatgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||| || ||||||||||| ||||| ||||||| |||||||  || ||| ||||||||||| |||||||||||||||||||||    
T  29158420 catgaaatttgtaacaccccattacccaaaagtaattaaataacaattatacatcagagttaagcaccaaacgggcatgctaca 29158503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 24368507 - 24368635
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||| ||||||||| |||||||  ||||||  ||||| |||||||||| |  ||||||| |||| |||||||| | |  | | ||| ||||||||||    
T  24368507 tgtaacatcccgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccaaaacgggtatgctacattgcaatatcaaaattcttaaata 24368606  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
     ||||||||||||||||||||||| ||||    
T  24368607 gcatatgaaactatttaattaaaccactt 24368635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 22405874 - 22405993
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacc-ttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| | |||||  || || ||||||||||||  ||||| ||||||||||||||  ||| |||  ||||||||||||||    
T  22405874 tgtaacaccccgttacccaaaagtaataaaataacaattaatcatcagagttaaacaccatacgggcatgctacatcaccatttctaaatttcttaaata 22405973  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  22405974 gaaaataaaactatttaatt 22405993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 19301372 - 19301318
Alignment:
Q  238 gggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||||| ||| ||||||| |||||||| |||| ||||||||||||    
T  19301372 gggcatgctacactacttttcaaaatttattaaataagatataaaactatttaat 19301318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 10583569 - 10583504
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    ||||||||| ||| |||||||| ||| |||||||||||||||| |||| ||| |||||||| ||||    
T  10583569 ccaaacgggtatgttacactacttttcaaaatttcttaaataaaatataaaattatttaataaaac 10583504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 12447988 - 12447907
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaact 298  Q
    ||||||||| |  |||||||||| ||||||| ||||| ||| |||||||||||||||  | || ||||||||||| ||||||    
T  12447988 catcagagtaattcaccaaacggacatgctatactacatttcaaaatttcttaaatagaaaataaaactatttaaataaact 12447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 22799250 - 22799189
Alignment:
Q  231 accaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  22799250 accaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 22799189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 8070537 - 8070417
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcacc-aaacgggcatgctacactac-cttttaaaatttcttaaat 272  Q
    ||||||||||||||| ||||||||| |||||||  ||||||  ||||||||||  |||| |||||||||||||||| | |   || ||||||||||||||    
T  8070537 tgtaacaccccgttacccaaaagtaattaaatagcaaatatcaatcagagttaaacaccaaaacgggcatgctacattgcaaattcaaaatttcttaaat 8070438  T
Q  273 aacatatgaaactatttaatt 293  Q
    |  | || |||||||||||||    
T  8070437 agaaaataaaactatttaatt 8070417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 19285714 - 19285756
Alignment:
Q  341 aaacatcaacaactgtttaaaacctccaaataatatcttggcat 384  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  19285714 aaacgtcaacaactgtttaaa-cctccaaataatatcttggcat 19285756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 21794081 - 21794031
Alignment:
Q  341 aaacatcaacaactgtttaaaacctccaaa-taatatcttggcattaagcct 391  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  21794081 aaacatcaacaactgtttaaa-cctccaaaataatatcttggcataaagcct 21794031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 24720039 - 24720098
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||  ||||||| |||||||||||||||||||   ||| ||||||||||||    
T  24720039 caaacgggcatgtcacactactttttaaaatttcttaaatagattataaaactatttaat 24720098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 8070334 - 8070300
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||| ||||||||||||    
T  8070334 atcttggcattaagcctaatcatcaataagtcaac 8070300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 8717898 - 8717852
Alignment:
Q  246 tacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||| |||||||||||||||||||  |||| ||||||||||||    
T  8717898 tacactactttttaaaatttcttaaatagaatataaaactatttaat 8717852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 30800278 - 30800163
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||| | |||||||  || ||| ||||||||| |  |||  ||||||||||||||||  | ||| |||||||||||||||     
T  30800278 tgtaacaccccgttacccaaaagcaattaaataacaattatacatcagagtaatccac--aacgggcatgctacacgtcatttcaaaatttcttaaatag 30800181  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  30800180 aaaataaaactatttaat 30800163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 7237992 - 7237955
Alignment:
Q  369 aataatatcttggcattaagcctaatcaacaataagtc 406  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  7237992 aataacatcttggcattaagcctaaacaacaataagtc 7237955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 19473054 - 19472997
Alignment:
Q  235 aacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  19473054 aacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 19472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 21965784 - 21965841
Alignment:
Q  235 aacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||||||  | ||| |||||||||||||||| | || ||||||||||||    
T  21965784 aacgggcatgctacacgtcatttcaaaatttcttaaataaaaaataaaactatttaat 21965841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 24413025 - 24412968
Alignment:
Q  235 aacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  24413025 aacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 24412968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 1e-69; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 176 - 393
Target Start/End: Complemental strand, 54092522 - 54092308
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||| ||| |||||||||||||||     
T  54092522 tgtaacaccccgttacctaaaagtatttaaatataaaatattcatcagagtaattcaccaaactggcatgctacactacatttcaaaatttcttaaatag 54092423  T
Q  275 catatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataat 374  Q
    ||||||||||||||| ||||||| |||||| |||||| |||||||||||||||||||||||    ||| ||||||||| |||||||||||||||||||||    
T  54092422 catatgaaactatttgattaaacaactttcaaacatcgttaaacttgcagcggattattat----caaccatcaacaattgtttaaaacctccaaataat 54092327  T
Q  375 atcttggcattaagcctaa 393  Q
    |||||||||| || |||||    
T  54092326 atcttggcataaaacctaa 54092308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 231 - 393
Target Start/End: Complemental strand, 19344969 - 19344810
Alignment:
Q  231 accaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggatt 330  Q
    |||||||||||||||||||||||  || |||||| |||||||| ||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||    
T  19344969 accaaacgggcatgctacactacagttcaaaattccttaaatagcatatgaaactatttgattaaacaactttcaaacatcgttaaacttgcagcggatt 19344870  T
Q  331 attattcaacaaacatcaacaactgtttaaaacc-tccaaataatatcttggcattaagcctaa 393  Q
    |||||    ||| ||||||||| ||||||||||| || ||||||||||||||||| ||||||||    
T  19344869 attat----caaccatcaacaattgtttaaaaccatcaaaataatatcttggcataaagcctaa 19344810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 176 - 409
Target Start/End: Original strand, 16832572 - 16832802
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||     
T  16832572 tgtaacaccccgttacccaaaagtaattaaatataacataatcatcagagttaagcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 16832671  T
Q  275 catatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataat 374  Q
    |||||  |||||||||| | ||| |||  | ||||||| ||| ||||||||||  ||||  |   |  |||||||||| | ||| |||||||| ||||||    
T  16832672 catatataactatttaaatgaacaactgacaaacatcaataatcttgcagcgggatatttgtttcc--acatcaacaattattt-aaacctcc-aataat 16832767  T
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||||||||||||||| |||||| || |||||    
T  16832768 atcttggcattaagcctaaacaacaaaaaatcaac 16832802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 12725965 - 12725843
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||| |||| ||||||| |||||||||| ||| |||||||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||     
T  12725965 tgtaacaccccgctacccaaaagtaattaaatataacataatcatcagagttaagcaccaaacggacatgctacactacatttcaaaatttcttaaatag 12725866  T
Q  275 catatgaaactatttaattaaac 297  Q
    |||||||||||||||||||||||    
T  12725865 catatgaaactatttaattaaac 12725843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 15374004 - 15374125
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||| |  ||| |||||||||||||||||||| ||| |||||||||||||||     
T  15374004 tgtaacaccctgttacccaaaagtaattaaatataaaatattcatcagagtaattcac-aaacgggcatgctacactacatttcaaaatttcttaaatag 15374102  T
Q  275 catatgaaactatttaattaaac 297  Q
    |||||||||||||||||||||||    
T  15374103 catatgaaactatttaattaaac 15374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 172 - 298
Target Start/End: Complemental strand, 8374841 - 8374715
Alignment:
Q  172 tatatgtaacaccccgttaccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaa 271  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| |||||||| |  |||||| ||||||||||||||||| |||| ||||||||||||    
T  8374841 tatatgtaacaccctgttaccaaaagtaattaaatataaaatatttatcagagtaattcaccaatcgggcatgctacactacattttcaaatttcttaaa 8374742  T
Q  272 taacatatgaaactatttaattaaact 298  Q
    ||  | || |||||||||||| |||||    
T  8374741 tagaaaataaaactatttaataaaact 8374715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 9692251 - 9692131
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||  | |  ||| |||||||||||||||||||| ||| |||||||||||||||    
T  9692251 atgtaacaccccgttacccaaaagtaattaaatataaaatattcatcag--taattcac-aaacgggcatgctacactacatttcaaaatttcttaaata 9692155  T
Q  274 acatatgaaactatttaattaaac 297  Q
     |||||||||||||||||||||||    
T  9692154 gcatatgaaactatttaattaaac 9692131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 46071881 - 46071779
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttc-gaacatcattaaacttgcagcggatt 330  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||||||| ||||||  ||||||||| |||||||||||||||    
T  46071881 ccaaacgggcatgctacactacattttaaaatttctt-aatagcatatgaaactattaaattaaacaactttcaaaacatcatt-aacttgcagcggatt 46071784  T
Q  331 attat 335  Q
    |||||    
T  46071783 attat 46071779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 292
Target Start/End: Complemental strand, 30597690 - 30597571
Alignment:
Q  174 tatgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    |||||||||||||||| || ||||| | ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||  |||| |||||||||    
T  30597690 tatgtaacaccccgttgcccaaaagcaattaaatacaaaatattcatcagagttaagcaccaaacgggcatgctacactacattccaaaaattcttaaat 30597591  T
Q  273 aacatatgaaactatttaat 292  Q
    |  | || ||||||||||||    
T  30597590 agaaaataaaactatttaat 30597571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 32388842 - 32388725
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||| ||||||| | ||||||| ||||||||||||||||| |  |||||||| | ||||||||||||| ||| |||||||||||||||     
T  32388842 tgtaacaccccgttatccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacagacatgctacactacatttcaaaatttcttaaatag 32388743  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  32388742 aaaataaaactatttaat 32388725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 298
Target Start/End: Complemental strand, 30126302 - 30126180
Alignment:
Q  177 gtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataac 275  Q
    |||||||||||||| || |||  | |||||||||||| |||||||||||| |  || ||||| |||||||||||||||||||| ||||||||||||||      
T  30126302 gtaacaccccgttatcccaaaacaattaaatataaaagattcatcagagtaattcatcaaacaggcatgctacactaccttttcaaatttcttaaataga 30126203  T
Q  276 atatgaaactatttaattaaact 298  Q
    | || | |||||||||| |||||    
T  30126202 aaataatactatttaatgaaact 30126180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 48775481 - 48775382
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||| |||||||||  ||||||||||||||||    ||||||| ||||||||||||||||| ||| ||| |||||||||||    
T  48775481 tgtaacaccccgttacccaaaagcatttaaataacaaatattcatcagagtatttcaccaaaacgggcatgctacactacatttcaaattttcttaaata 48775382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 2499905 - 2499776
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa--cgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||| |||||||  ||||||  ||||| |||||||||| |  |||||||  |||| |||||||| | |  | | ||| |||||||||    
T  2499905 tgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccaaaaacgggtatgctacattgcaatatcaaaattcttaaat 2499806  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    | ||||||||||||||||||||||| ||||    
T  2499805 agcatatgaaactatttaattaaaccactt 2499776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 9772758 - 9772641
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||| | |||||||  |||||||||||||||| |  |  ||| ||||| ||||||||||| ||| |||| ||||||||||     
T  9772758 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtgattccacaa-cgggcttgctacactacatttcaaaaattcttaaatag 9772660  T
Q  275 catatgaaactatttaatt 293  Q
     | ||||||||||||||||    
T  9772659 aaaatgaaactatttaatt 9772641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 38742226 - 38742300
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    |||||||| |||||||| ||||||| |||||||  || ||| ||||||||||| |||||||||||||||||||||    
T  38742226 tgtaacactccgttacccaaaagtaattaaataacaattatacatcagagttaagcaccaaacgggcatgctaca 38742300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 20377932 - 20377861
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||||||| |||||| || |||||| ||||||  |||||||||||| ||||||||||||||||| ||||||||    
T  20377932 gcagcggaatattat-catcaaacaccaacaatagtttaaaacctcaaaataatatcttggcataaagcctaa 20377861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 10609425 - 10609350
Alignment:
Q  259 aaaatttcttaaataacatatgaaactatttaattaaactactttc-gaacatcattaaacttgcagcggattatt 333  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||  |||||||||||  ||||| |||| ||||    
T  10609425 aaaatttcttaaatagcatatgaaactatttaattaaacatctttcaaaacatcattaattttgcaacggaatatt 10609350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 12272252 - 12272134
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||||| |||||||  ||||| | |||||||||| ||||| ||||||||||||||| | |   || |||||||||||||||    
T  12272252 tgtaacaccccgttacccaaaagtaattaaataacaaatactaatcagagttaagcacc-aacgggcatgctacattgcaaattcaaaatttcttaaata 12272154  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  12272153 gaaaataaaactatttaatt 12272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 13037678 - 13037603
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||   |||||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  13037678 catcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 13037603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 13044043 - 13043968
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||   |||||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  13044043 catcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 13043968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 49162689 - 49162758
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcct 391  Q
    |||||||| |||||| || ||||||||||||| ||||||||||  | ||||||||||||||||| ||||||    
T  49162689 gcagcggaatattat-catcaaacatcaacaattgtttaaaactccaaaataatatcttggcataaagcct 49162758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 31691383 - 31691322
Alignment:
Q  232 ccaaacgggcatgctacactac-cttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  31691383 ccaaacgggcatgtcacactacactttcaaaatttcttaaatagcatataaaactatttaat 31691322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 31942834 - 31942895
Alignment:
Q  232 ccaaacgggcatgctacactac-cttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  31942834 ccaaacgggcatgtcacactacactttcaaaatttcttaaatagcatataaaactatttaat 31942895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 49398789 - 49398915
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaat-ataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa--tttcttaa 270  Q
    |||||||||||||||| ||||||||| |||||| || ||| || ||||||||| |  | |||||||||||||  ||||||| |||| |||  ||||||||    
T  49398789 atgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaa 49398887  T
Q  271 ata-acatatgaaactatttaattaaac 297  Q
    ||| | |||| |||||||||||||||||    
T  49398888 atagaaatataaaactatttaattaaac 49398915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 8584153 - 8584028
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  8584153 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 8584055  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  8584054 tagaaatataaaactatttaattaaac 8584028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 14012958 - 14012833
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  14012958 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 14012860  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  14012859 tagaaatataaaactatttaattaaac 14012833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 14089250 - 14089375
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa--tttcttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| |||  |||||||||    
T  14089250 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 14089348  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  14089349 tagaaatataaaactatttaattaaac 14089375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 15935738 - 15935679
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  15935738 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 15935679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 15937588 - 15937529
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  15937588 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 15937529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 18757755 - 18757652
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatat-gaaactatttaattaaactactttc-gaacatcattaaacttgcagcggat 329  Q
    |||||||||||||  ||||||| |||| ||| ||||||||||  ||||  |||||||||| |||||| ||||||  |||||||||||  ||||||||||     
T  18757755 ccaaacgggcatgtcacactacattttcaaaattcttaaatagaatataaaaactatttatttaaacaactttcaaaacatcattaattttgcagcggaa 18757656  T
Q  330 tatt 333  Q
    ||||    
T  18757655 tatt 18757652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 18913398 - 18913517
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaata-ttcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaat 272  Q
    ||||||||||||||| || |||| | |||||||| ||||| |||||||||||||  | || |||||| ||||||||||||   || |||| |||||||||    
T  18913398 tgtaacaccccgttatcccaaagcaattaaatattaaataattcatcagagttaaacccctaacgggtatgctacactactaattcaaaaattcttaaat 18913497  T
Q  273 aacatatgaaactatttaat 292  Q
    |  |||| ||||||||||||    
T  18913498 aggatataaaactatttaat 18913517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 24123945 - 24123895
Alignment:
Q  341 aaacatcaacaactgtttaaaacctccaaa-taatatcttggcattaagcct 391  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  24123945 aaacatcaacaactgtttaaa-cctccaaaataatatcttggcataaagcct 24123895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 47120448 - 47120574
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| |||||||  |||||| | |||| ||||||||||    ||||||||||| |||||||| | |  ||| ||||||||||||||     
T  47120448 tgtaacaccccgttacccaaaagtaaataaata-acaataatcatcagagtatttcaccaaacgggtatgctacattgcaatttcaaatttcttaaatag 47120546  T
Q  275 catatgaaactatttaattaaactactt 302  Q
     | || |||||||||||| |||| ||||    
T  47120547 aaaataaaactatttaatcaaaccactt 47120574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 47127816 - 47127942
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| |||||||  |||||| | |||| ||||||||||    ||||||||||| |||||||| | |  ||| ||||||||||||||     
T  47127816 tgtaacaccccgttacccaaaagtaaataaata-acaataatcatcagagtatttcaccaaacgggtatgctacattgcaatttcaaatttcttaaatag 47127914  T
Q  275 catatgaaactatttaattaaactactt 302  Q
     | || |||||||||||| |||| ||||    
T  47127915 aaaataaaactatttaatcaaaccactt 47127942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 10381279 - 10381317
Alignment:
Q  264 ttcttaaataacatatgaaactatttaattaaactactt 302  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  10381279 ttcttaaatagcatatgaaactatttaattaaaccactt 10381317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 10409932 - 10409970
Alignment:
Q  264 ttcttaaataacatatgaaactatttaattaaactactt 302  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  10409932 ttcttaaatagcatatgaaactatttaattaaaccactt 10409970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 54834051 - 54833936
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||| | |||||||  || ||| ||||||||| |  |||  ||||||||||||||||  | ||| |||||||||||||||     
T  54834051 tgtaacaccccgttacccaaaagcaattaaataacaattatacatcagagtaatccac--aacgggcatgctacacgtcatttcaaaatttcttaaatag 54833954  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  54833953 aacataaaactatttaat 54833936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 13303984 - 13303923
Alignment:
Q  232 ccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||| |||||||||||||||  |||| ||||||||||||    
T  13303984 ccaaacgggcatgtcacactacatttttaaaatttcttaaatagaatataaaactatttaat 13303923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 13314660 - 13314599
Alignment:
Q  232 ccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||| |||||||||||||||  |||| ||||||||||||    
T  13314660 ccaaacgggcatgtcacactacatttttaaaatttcttaaatagaatataaaactatttaat 13314599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 15518499 - 15518560
Alignment:
Q  232 ccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||| |||||||||||||||  |||| ||||||||||||    
T  15518499 ccaaacgggcatgtcacactacattttcaaaatttcttaaatagaatataaaactatttaat 15518560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 16332376 - 16332319
Alignment:
Q  236 acgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    |||||||||||||||||| ||| |||| ||||||||||  | || |||||||||||||    
T  16332376 acgggcatgctacactacgtttcaaaaattcttaaatagaaaataaaactatttaatt 16332319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 53874249 - 53874208
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||||||| ||| ||||||| |||||||    
T  53874249 ccaaacgggcatgctacactacgtttcaaaatttattaaata 53874208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 11888760 - 11888820
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||   ||| ||||||||||||    
T  11888760 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaat 11888820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 12148178 - 12148238
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||   ||| ||||||||||||    
T  12148178 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaat 12148238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 12152304 - 12152364
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||   ||| ||||||||||||    
T  12152304 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaat 12152364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 20378088 - 20378048
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaata 214  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  20378088 atgtaacaccccgttacccaaaagtaattaaatataaaata 20378048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 48775282 - 48775242
Alignment:
Q  368 aaataatatcttggcattaagcctaatcaacaataagtcaa 408  Q
    ||||||||||||||||| |||||||| ||||||||| ||||    
T  48775282 aaataatatcttggcataaagcctaaccaacaataaatcaa 48775242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 4e-54; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 20888714 - 20888877
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggatta 331  Q
    |||||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||| | |||| |||||| |||||||||||||||||||    
T  20888714 ccaaacgggcatgctacactacattc-aaaatttcttaaatagcatatgaaactatttaattaaacaattttcaaacatcgttaaacttgcagcggatta 20888812  T
Q  332 ttattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaatcaacaa 400  Q
    ||||    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20888813 ttat----caaccatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaaacaacaa 20888877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 232 - 400
Target Start/End: Original strand, 20894333 - 20894496
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggatta 331  Q
    |||||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||| | |||| |||||| |||||||||||||||||||    
T  20894333 ccaaacgggcatgctacactacattc-aaaatttcttaaatagcatatgaaactatttaattaaacaattttcaaacatcgttaaacttgcagcggatta 20894431  T
Q  332 ttattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaatcaacaa 400  Q
    ||||    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20894432 ttat----caaccatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaaacaacaa 20894496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 202 - 388
Target Start/End: Original strand, 42219791 - 42219978
Alignment:
Q  202 taaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaataacatatgaaactatttaattaaactac 300  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||| ||    
T  42219791 taaatataacataatcatcagagttaagcaccaaacgggcatgctacactacatttttaaaatttcttaaatagcatatgaaactatttaaataaacaac 42219890  T
Q  301 tttc-gaacatcattaaacttgcagcggattattattcaacaaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaag 388  Q
    ||||  ||||||| ||| ||||||||||| |||| | || ||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  42219891 tttcaaaacatcaataatcttgcagcggaatatt-tgcatcaaacatcaacaattgttt-aaacctccaaaataatatcttggcattaag 42219978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 21880863 - 21880985
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  21880863 tgtaacaccccgttacccaaaagtaattaaatataaaatatacatcagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 21880962  T
Q  275 catatgaaactatttaattaaac 297  Q
    |||||||||||||||||||||||    
T  21880963 catatgaaactatttaattaaac 21880985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 2973533 - 2973415
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  2973533 tgtaacgccccgttacccaaaagtatttaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 2973434  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  2973433 aaaataaaactatttaatt 2973415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 41405433 - 41405316
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| || |||| ||||||||||||||||| |  || ||||||||||||||||||||| ||| |||||||||||||||     
T  41405433 tgtaacaccccgttacccaaaagtaatttaatacaaaatattcatcagagtaattcatcaaacgggcatgctacactacatttcaaaatttcttaaatag 41405334  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  41405333 aaaataaaactatttaat 41405316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 19129160 - 19129043
Alignment:
Q  176 tgtaacaccccgttaccaaaagt-atttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||| | |||||||||||| |||  ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||||     
T  19129160 tgtaacaccccgttacccaaaatcatttaaatataacataaacatcagagtaag-caccaaacgggcatgctacactacatttcaaaatttcttaaatag 19129062  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  19129061 aaaataaaactatttaatt 19129043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 33198284 - 33198382
Alignment:
Q  176 tgtaacaccccgttaccaaaagt-atttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||||||  |  |||||||||||||||||||||||| | | |||||||||||||||    
T  33198284 tgtaacaccccgttacccaaaatcatttaaatataaaatattcatcagagaaattcaccaaacgggcatgctacactacatatcaaaatttcttaaata 33198382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 384
Target Start/End: Original strand, 31664343 - 31664539
Alignment:
Q  191 ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaa--ctatt 288  Q
    ||||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||||||| ||| ||||||| |||||||  |||| |||  | |||    
T  31664343 ccaaaagtaattaaatataaaatattcatcagagtaattcatcaaacgggcatgctacactacatttcaaaatttattaaatagaatataaaaatccatt 31664442  T
Q  289 taattaaactactttcgaa--catcattaaacttgcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcat 384  Q
    | |||||||  |    |||  ||||||| ||   |||||||| ||||||||| |||||||||||||  |||| ||| ||||||| |||||||||||||    
T  31664443 t-attaaacatccaatgaagtcatcatttaaacagcagcggaatattattcatcaaacatcaacaatggttttaaaactccaaacaatatcttggcat 31664539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 11209417 - 11209342
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    |||||||||||||||||| ||||||| |||||||  || ||||||||||||||  |||||||||||||||||||||    
T  11209417 atgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttgagcaccaaacgggcatgctaca 11209342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 5938187 - 5938261
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||| ||||||||||| |||||||||||||||||||||    
T  5938187 tgtaacaccccgttacccaaaagtaattaaataataattatacatcagagttaagcaccaaacgggcatgctaca 5938261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 11203261 - 11203187
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||  |||||||||||||||||||||    
T  11203261 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttgagcaccaaacgggcatgctaca 11203187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 35463442 - 35463368
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| ||| |||||||||||||||||    
T  35463442 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcaacaaacgggcatgctaca 35463368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 13481690 - 13481571
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||| | |||||||  ||||||| |||||||||| ||||||||||||||||| ||| | |   || |||||||||||||||    
T  13481690 tgtaacaccccgttatccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacgggcatgccacattgcaaattcaaaatttcttaaata 13481591  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  13481590 gaaaataaaactatttaatt 13481571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 21396070 - 21396145
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaa-tataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| ||||| ||  |||||| ||||||||||| |||||||||||||||||||||    
T  21396070 tgtaacaccccgttacccaaaagtaattaaaataacaaatatacatcagagttaagcaccaaacgggcatgctaca 21396145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 34771489 - 34771608
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||  |||||||||  ||||||||||||||||    ||||||| |||||||||||||||||  || |||| ||||||||||    
T  34771489 tgtaacaccccgttacccaaaaacatttaaataacaaatattcatcagagtatttcaccaaaacgggcatgctacactacaattcaaaaattcttaaata 34771588  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  34771589 gaaaataaaactatttaatt 34771608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 43251413 - 43251532
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| |||||||  | ||||| |||||||||| ||| ||||||||||||||||| | |   || |||||||||||||||    
T  43251413 tgtaacaccccgttacccaaaagtaattaaataatagatattaatcagagttaagcatcaaacgggcatgctacattgcaaattcaaaatttcttaaata 43251512  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  43251513 gaaaataaaactatttaatt 43251532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 45143379 - 45143280
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||| |||||||||  ||||||||||||||||    ||||||| ||| ||||||||||||| ||| ||| |||||||||||    
T  45143379 tgtaacaccccgttatccaaaagcatttaaataacaaatattcatcagagtatttcaccaaaacggacatgctacactacatttcaaattttcttaaata 45143280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 45152148 - 45152049
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||| |||||||||  ||||||||||||||||    ||||||| ||| ||||||||||||| ||| ||| |||||||||||    
T  45152148 tgtaacaccccgttatccaaaagcatttaaataacaaatattcatcagagtatttcaccaaaacggacatgctacactacatttcaaattttcttaaata 45152049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 7355517 - 7355591
Alignment:
Q  176 tgtaacaccccgttaccaaaa-gtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||| ||| |||||||  |  ||||||||||||||| |||||||||||||||||||||    
T  7355517 tgtaacaccccgttacccaaatgtaattaaataacacttattcatcagagttaagcaccaaacgggcatgctaca 7355591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 7358510 - 7358584
Alignment:
Q  176 tgtaacaccccgttaccaaaa-gtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||| ||| |||||||  |  ||||||||||||||| |||||||||||||||||||||    
T  7358510 tgtaacaccccgttacccaaatgtaattaaataacacttattcatcagagttaagcaccaaacgggcatgctaca 7358584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 11936359 - 11936432
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| ||||| |||||||||||||||    
T  11936359 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcacc-aacgggcatgctaca 11936432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 36036108 - 36036182
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||  |||||||  || |||||||||| |||| |||||||||||||||||||||    
T  36036108 tgtaacaccccgttacccaaaagtgattaaataacaattattcatcagggttaagcaccaaacgggcatgctaca 36036182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 44663824 - 44663695
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcacca--aacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||| |||||||  ||||||  ||||| |||||||||| |  |||||  |||||  |||||||| | |  | | ||| |||||||||    
T  44663824 tgtaacaccccgttacccaaaagtaaataaataataaataatcatcagagtaattcaccagaaacggatatgctacattgcaatatcaaaattcttaaat 44663725  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    ||||||||||||||||||||||||| ||||    
T  44663724 aacatatgaaactatttaattaaaccactt 44663695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 3267441 - 3267313
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| |||||||  ||||||  ||||||||    ||||||||||| |||||||| | |  ||| |||| ||||||||||    
T  3267441 tgtaacaccccgttacccaaaagtaattaaataacaaatatatatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaaattcttaaata 3267342  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
      | |||||||||||||||||||| ||||    
T  3267341 gaaaatgaaactatttaattaaaccactt 3267313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 13481488 - 13481454
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  13481488 atcttggcattaagcctaatcaacaataagtcaac 13481454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 44657895 - 44657766
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcacca--aacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||| ||||| |  ||||||  ||||| |||||||||| |  |||||  |||||| |||||||| | |  | | ||| |||||||||    
T  44657895 tgtaacaccccgttacccaaaagcaaataaataataaataatcatcagagtaattcaccagaaacgggtatgctacattgcaatatcaaaattcttaaat 44657796  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    ||||||| ||||||||||||||||| ||||    
T  44657795 aacatataaaactatttaattaaaccactt 44657766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 47873244 - 47873127
Alignment:
Q  176 tgtaacaccccgttac-caaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||||||| |||||  | |||||||  |||||||||||||||| |  |  ||| |||| |||||||||||| ||| |||||||||||||||     
T  47873244 tgtaacaccccgttacacaaaaacaattaaataacaaatattcatcagagtaattccacaa-cgggtatgctacactacatttcaaaatttcttaaatag 47873146  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  47873145 aaaataaaactatttaatt 47873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 50081524 - 50081653
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa--cgggcatgctacactaccttttaaaatttcttaaat 272  Q
    |||||||||| |||||| |||||||  ||||||  ||||| |||||||||| |  |||||||  |||| |||||||| | |  | | ||| |||||||||    
T  50081524 tgtaacaccctgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccaaaaacgggtatgctacattgcaatatcaaaattcttaaat 50081623  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    | ||||||||||||||||||||||| ||||    
T  50081624 agcatatgaaactatttaattaaaccactt 50081653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 18260735 - 18260795
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  18260735 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 18260795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 18270698 - 18270758
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  18270698 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 18270758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 30873256 - 30873316
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||||||| |||||||||||  |||| ||||||||||||    
T  30873256 ccaaacgggcatgtcacactactttttaaattttcttaaatagaatataaaactatttaat 30873316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 46045535 - 46045464
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||||||| |||||| || |||| |||||| | |||| ||||||||||||||| |||||||||| ||||||||    
T  46045535 gcagcggaatattat-catcaaatatcaacgattgttaaaaacctccaaataacatcttggcataaagcctaa 46045464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 899082 - 899151
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||| |||||| || ||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||    
T  899082 gcagcggaatattat-catcaaacatcaacaattgttt-aaacctccaaaataatatcttggcataaagcct 899151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 33096535 - 33096585
Alignment:
Q  341 aaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  33096535 aaacatcaacaactgttt-aaacctccaaaataatatcttggcataaagcct 33096585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 14484963 - 14485025
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||| ||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  14484963 caccaaacaggcatgtcacactacatttcaaaatttcttaaatagaatataaaactatttaat 14485025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 14992356 - 14992298
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  14992356 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 14992298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 15005703 - 15005645
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  15005703 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 15005645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 30237191 - 30237249
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  30237191 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 30237249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 43251615 - 43251649
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||| ||||||||||||    
T  43251615 atcttggcattaagcctaatcatcaataagtcaac 43251649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 18170434 - 18170369
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    |||||||| ||||  ||||||| ||| |||||||||||||||  |||| |||||||||||| ||||    
T  18170434 ccaaacggacatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaaac 18170369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 42956775 - 42956734
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||||||| ||| ||||||| |||||||    
T  42956775 ccaaacgggcatgctacactacgtttcaaaatttattaaata 42956734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 45960501 - 45960460
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||||||| ||| ||||||| |||||||    
T  45960501 ccaaacgggcatgctacactacgtttcaaaatttattaaata 45960460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 302
Target Start/End: Complemental strand, 6457994 - 6457867
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||| |||||||  |||||| | |||| ||||||||||    ||||||||||| |||||||| | |  ||| ||| ||||||||||    
T  6457994 atgtaacaccccgttacccaaaagtaaataaata-acaataatcatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaattcttaaata 6457896  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
      | || |||||||||||| |||| ||||    
T  6457895 gaaaataaaactatttaatcaaaccactt 6457867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 16484034 - 16484090
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||   |||||||||||||||  ||||||| ||| |||||||||||||||    
T  16484034 catcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaata 16484090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 45143180 - 45143140
Alignment:
Q  368 aaataatatcttggcattaagcctaatcaacaataagtcaa 408  Q
    ||||||||||||||||| |||||||| ||||||||| ||||    
T  45143180 aaataatatcttggcataaagcctaaacaacaataaatcaa 45143140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 45151949 - 45151909
Alignment:
Q  368 aaataatatcttggcattaagcctaatcaacaataagtcaa 408  Q
    ||||||||||||||||| |||||||| ||||||||| ||||    
T  45151949 aaataatatcttggcataaagcctaaacaacaataaatcaa 45151909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 233 - 393
Target Start/End: Original strand, 24042 - 24197
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattat 332  Q
    ||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  24042 caaacgggcatgctacactacatttcaaattttcttaaatagcatatgaaactatttaattaaacaactttc-aacatcattaaacttgcagcggattat 24140  T
Q  333 tattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||    ||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  24141 tat----caaccatcaacaactgtttaaaacctcgaaataatatcttagcataaagcctaa 24197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 93; Significance: 4e-45; HSPs: 3)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 409
Target Start/End: Original strand, 7037 - 7267
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||||| |||  ||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||     
T  7037 tgtaacaccccgttacccaaaagtaattaaatataacataaacatcagagttaagcaccaaacgggcatgctacactacatttcaaaattccttaaatag 7136  T
Q  275 catatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattatt--attcaacaaacatcaacaactgtttaaaacctccaaata 372  Q
    |||||  |||||||||| ||||| ||| || ||||||| ||||||||||||||| ||||   |||    ||||||||| | | ||| |||||||| ||||    
T  7137 catatataactatttaaataaacaactgtcaaacatcaataaacttgcagcggaatatttgtttc----aacatcaaccattattt-aaacctcc-aata 7230  T
Q  373 atatcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  7231 atatcttggcattaagcctaaacaacaataaatcaac 7267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 12248 - 12343
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaa 270  Q
    ||||||||||| ||| ||||||||| |||||||||| |||  ||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||    
T  12248 tgtaacaccccattaaccaaaagtaattaaatataacataaacatcagagttaagcaccaaacgggcatgctacactacatttcaaaattccttaa 12343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 12408 - 12456
Alignment:
Q  360 aaacctccaaataatatcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  12408 aaacctccaa-taatatcttggcattaagcctaaacaacaataaatcaac 12456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 233 - 393
Target Start/End: Complemental strand, 272 - 117
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattat 332  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  272 caaacgggcatgctacattacatttcaaattttcttaaatagcatatgaaactatttaattaaacaactttc-aacatcattaaacttgcagcggattat 174  T
Q  333 tattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||    ||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||    
T  173 tat----caaccatcaacaactatttaaaacctccaaataataacttagcataaagcctaa 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 9e-43; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 176 - 409
Target Start/End: Complemental strand, 7774480 - 7774250
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||| ||||||| ||||||| |||||||||| |||  ||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||     
T  7774480 tgtaacacctcgttacccaaaagtaattaaatataacataaacatcagagttaagcaccaaacgggcatgctacactacatttcaaaattccttaaatag 7774381  T
Q  275 catatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattatt--attcaacaaacatcaacaactgtttaaaacctccaaata 372  Q
    ||||| ||||||||||| ||||| ||| |  ||||||| ||||||||||||||| ||||   |||    ||||||||||| | ||| |||||||| |||     
T  7774380 catataaaactatttaaataaacaactgttaaacatcaataaacttgcagcggaatatttgtttc----aacatcaacaattattt-aaacctcc-aatg 7774287  T
Q  373 atatcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  7774286 atatcttggcattaagcctaaacaacaataaatcaac 7774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 232 - 391
Target Start/End: Complemental strand, 28260645 - 28260486
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaactactttc-gaacatcattaaacttgcagcggatt 330  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||| ||||||  |||||| ||||||||||||||||||    
T  28260645 ccaaacgggcatgctacactacatttcaaaatttcttaaatagcatatgtaactatttaattaaacaactttcaaaacatcgttaaacttgcagcggatt 28260546  T
Q  331 attattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcct 391  Q
    |||| ||| ||||||||||||| ||||||||||  | ||| ||||||||||||| ||||||    
T  28260545 atta-tcatcaaacatcaacaattgtttaaaactccaaaacaatatcttggcataaagcct 28260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 16775891 - 16775773
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||     
T  16775891 tgtaacaccccgttacccaaaagtatttaaatataaaatattcatcagagttaagcaccaaacgggcatgctacacttcatttcaaaatttcttaaatag 16775792  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  16775791 aaaataaaactatttaatt 16775773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 201 - 333
Target Start/End: Original strand, 24056951 - 24057084
Alignment:
Q  201 ttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaataacatatgaaactatttaattaaacta 299  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| |    
T  24056951 ttaaatataaaataatcatcaaagttaagcaccaaacgggcatgctacactacatttttaaaatttcttaaataacatatg-aactatttaattaaacaa 24057049  T
Q  300 ctttc-gaacatcattaaacttgcagcggattatt 333  Q
    |||||  ||||||||||| ||||||||||| ||||    
T  24057050 ctttcaaaacatcattaatcttgcagcggaatatt 24057084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 25419190 - 25419299
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaactactttc-gaacatcatt 314  Q
    ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  25419190 catcagagttaagcaccaaacgggcatgctacactacattttcaaaatttcttaaatagcatatgaaactatttaattaaacaactttcaaaacatcatt 25419289  T
Q  315 aaacttgcag 324  Q
    || |||||||    
T  25419290 aatcttgcag 25419299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 39609664 - 39609545
Alignment:
Q  216 tcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaactactttc-gaacatcat 313  Q
    ||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||| ||||||  ||||||||    
T  39609664 tcatcagtgttaagcaccaaacgggcatgctacactacattttcaaaatttcttatatagcatatgaaactatttaattaaacaactttcaaaacatcat 39609565  T
Q  314 taaacttgcagcggattatt 333  Q
    ||| ||||||||||| ||||    
T  39609564 taatcttgcagcggaatatt 39609545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 26649717 - 26649841
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaata-ttcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||| |||||| ||||||| |||||||  || || |||| |||||||| ||||||||||| ||||||||| ||| |||||||||| |||||||    
T  26649717 atgtaacaccctgttacccaaaagtaattaaataataattaattcaacagagttaagcaccaaacggacatgctacattacattttaaaattccttaaat 26649816  T
Q  273 aacatatgaaactatttaattaaac 297  Q
    | |||||||||||||||||||||||    
T  26649817 agcatatgaaactatttaattaaac 26649841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 26921302 - 26921426
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaata-ttcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||| |||||| ||||||| |||||||  || || |||| |||||||| ||||||||||| ||||||||| ||| |||||||||| |||||||    
T  26921302 atgtaacaccctgttacccaaaagtaattaaataataattaattcaacagagttaagcaccaaacggacatgctacattacattttaaaattccttaaat 26921401  T
Q  273 aacatatgaaactatttaattaaac 297  Q
    | |||||||||||||||||||||||    
T  26921402 agcatatgaaactatttaattaaac 26921426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 20989634 - 20989733
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |  ||||||||||||||||||||||||  || |||||||||||||||    
T  20989634 atgtaacaccccgttacccaaaagtaattaaatataaaatattcataagagtaattcaccaaacgggcatgctacactacacttcaaaatttcttaaata 20989733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 29747388 - 29747270
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||| |  |||||||||| ||||||||||||| | | |||| ||||||||||     
T  29747388 tgtaacaccccgttacccaaaagtatttaaatataaaacattcatcagagtgattcaccaaacggacatgctacactacatctcaaaaattcttaaatag 29747289  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  29747288 aaaataaaactatttaatt 29747270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 5342536 - 5342419
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||| ||||||| ||||| | ||||||| ||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  5342536 tgtaacacctcgttacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 5342437  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  5342436 aaaataaaactatttaat 5342419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 19361988 - 19362086
Alignment:
Q  201 ttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaataacatatgaaactatttaattaaact 298  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||||||||  |||||||||||||||||||  | || | |||||||||| |||||    
T  19361988 ttaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacatttttaaaatttcttaaatagaaaataatactatttaataaaact 19362086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 18941970 - 18941854
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||| |||||| ||||||| |||||| ||| |||||||||||||| |  ||||||||||||||||||||||| | ||| ||||||||||||||     
T  18941970 tgtaacaccctgttacccaaaagtaattaaatgtaacatattcatcagagtaattcaccaaacgggcatgctacacta-catttcaaatttcttaaatag 18941872  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  18941871 aaaataaaactatttaat 18941854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 19802680 - 19802581
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    ||||||| ||||||| || ||| || ||||||||||||||||||||||||| |  |||||||| ||||||||||||||| |||| |||||||||||||||    
T  19802680 tgtaacatcccgttatcccaaaataattaaatataaaatattcatcagagtaattcaccaaacaggcatgctacactacattttcaaaatttcttaaata 19802581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 33535605 - 33535681
Alignment:
Q  174 tatgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    |||||||||||| |||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  33535605 tatgtaacacccggttacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 33535681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 596533 - 596607
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    |||||||| |||||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  596533 tgtaacacaccgttacccaaaagtaattaaatagcaattattcatcagagttacgcaccaaacgggcatgctaca 596607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 42242573 - 42242473
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattca-tcagagttaggcacca-aacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||| |  || || || |||||||||||||||| ||| ||| ||||||||||    
T  42242573 tgtaacaccccgttacccaaaagtaattaaatataaaatattcaatcagagtaattcatcagaatgggcatgctacactacatttcaaagtttcttaaat 42242474  T
Q  273 a 273  Q
    |    
T  42242473 a 42242473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 22500246 - 22500365
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||| | |||||||  ||||||| |||||||||| ||||||||||||||||| ||| | |   || |||||||||||||||    
T  22500246 tgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacgggcatgccacattgcaaattcaaaatttcttaaata 22500345  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  22500346 gaaaataaaactatttaatt 22500365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 22506824 - 22506943
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||| | |||||||  ||||||| |||||||||| ||||||||||||||||| ||| | |   || |||||||||||||||    
T  22506824 tgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacgggcatgccacattgcaaattcaaaatttcttaaata 22506923  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  22506924 gaaaataaaactatttaatt 22506943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 5453746 - 5453874
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||||| |||||||  ||||| ||||||||||    ||||||||||| |||||||| | |  ||| |||||||||||||||    
T  5453746 tgtaacaccccgttacccaaaagtaattaaataacaaataatcatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaatttcttaaata 5453845  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
      | ||  |||||||||||||||| ||||    
T  5453846 gaaaatagaactatttaattaaaccactt 5453874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 18565891 - 18566011
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaat 272  Q
    |||||||||||||||||| ||||||| | |||||  | ||||| |||||||||| ||| ||||||||||||||||| | |   || ||||||||||||||    
T  18565891 atgtaacaccccgttacccaaaagtaatcaaataacagatattaatcagagttaagcatcaaacgggcatgctacattgcaaattcaaaatttcttaaat 18565990  T
Q  273 aacatatgaaactatttaatt 293  Q
    |  | || |||||||||||||    
T  18565991 agaaaataaaactatttaatt 18566011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 20937026 - 20937106
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    ||||||||| |  |||||||||||||||||||||||| ||| |||||| ||||||||   ||| |||||||||||| ||||    
T  20937026 catcagagtaattcaccaaacgggcatgctacactacatttcaaaattccttaaatagattataaaactatttaataaaac 20937106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 22313572 - 22313516
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||    
T  22313572 catcagagtaactcaccaaacgggcatgctacactacatttcaaaatttcttaaata 22313516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 23433571 - 23433511
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||||||||||||||||||  |||| ||||||||||||    
T  23433571 ccaaacgggcatgtcacactactttttaaaatttcttaaatagaatataaaactatttaat 23433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 23444936 - 23444876
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||||||||||||||||||  |||| ||||||||||||    
T  23444936 ccaaacgggcatgtcacactactttttaaaatttcttaaatagaatataaaactatttaat 23444876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 29747215 - 29747171
Alignment:
Q  349 acaactgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||    
T  29747215 acaattgtttaaaacctccaaataatatcttggcataaagcctaa 29747171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 10685413 - 10685542
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa--cgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||| ||||||||||| |||||||  ||||||  ||||| |||||||||| |  |||||||  |||| |||||||| | |  | | ||| |||||||||    
T  10685413 tgtaataccccgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccaaaaacgggtatgctacattgcaatatcaaaattcttaaat 10685512  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    | ||||||||||||||||||||||| ||||    
T  10685513 agcatatgaaactatttaattaaaccactt 10685542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 22500451 - 22500485
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  22500451 atcttggcattaagcctaatcaacaataagtcaac 22500485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 22507029 - 22507063
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  22507029 atcttggcattaagcctaatcaacaataagtcaac 22507063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 596704 - 596771
Alignment:
Q  342 aacatcaacaactgt-ttaaaacctccaaataatatcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||| |||||||||| |||||| |||||| |||||||||||||||||| |||| ||||||||| |||||    
T  596704 aacaacaacaactgtgttaaaatctccaattaatatcttggcattaagtctaa-caacaataaatcaac 596771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 37565423 - 37565483
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    ||||||||||||||||||||| ||| |||| ||||||||||  | || |||||||||||||    
T  37565423 caaacgggcatgctacactacatttcaaaaattcttaaatagaaaataaaactatttaatt 37565483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 1858365 - 1858240
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  1858365 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 1858267  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  1858266 tagaaatataaaactatttaattaaac 1858240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 21676169 - 21676119
Alignment:
Q  341 aaacatcaacaactgtttaaaacctccaaa-taatatcttggcattaagcct 391  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  21676169 aaacatcaacaactgtttaaa-cctccaaaataatatcttggcataaagcct 21676119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 25013075 - 25013134
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  25013075 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 25013134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 33535785 - 33535839
Alignment:
Q  347 caacaactgtttaaaacctccaaataatatcttggcattaagcctaatcaacaata 402  Q
    ||||||| ||| ||| |||||||||||||||||||||| |||||||| ||||||||    
T  33535785 caacaacggttaaaatcctccaaataatatcttggcataaagcctaa-caacaata 33535839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 18566094 - 18566128
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||| ||||||||||||    
T  18566094 atcttggcattaagcctaatcatcaataagtcaac 18566128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 405
Target Start/End: Original strand, 19507545 - 19507575
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagt 405  Q
    |||||||||||||||||||||||||||||||    
T  19507545 atcttggcattaagcctaatcaacaataagt 19507575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 20831178 - 20831216
Alignment:
Q  254 cttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  20831178 cttttaaaatttcttaaatagcatataaaactatttaat 20831216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 21906023 - 21905961
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||| ||||||  ||||||| || ||||||||||||||||  |||| ||||||||||||    
T  21906023 caccaaacaggcatgtcacactactttctaaaatttcttaaatagaatataaaactatttaat 21905961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 23082515 - 23082451
Alignment:
Q  235 aacgggcatgctacactacctttt--aaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    ||||||||||| |||||||  |||  ||||| |||||||||| |||| |||||||||||||||||    
T  23082515 aacgggcatgccacactactatttccaaaatctcttaaataaaatataaaactatttaattaaac 23082451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 19507385 - 19507417
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||| |||||||||||||||||||||    
T  19507385 catcagagttaagcaccaaacgggcatgctaca 19507417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 43686715 - 43686837
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||| |||| ||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||     
T  43686715 tgtaacaccccgctacccaaaagtaattaaatataacatattcatcagagttaagcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 43686814  T
Q  275 catatgaaactatttaattaaac 297  Q
    |||||||||||||||||||||||    
T  43686815 catatgaaactatttaattaaac 43686837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 333
Target Start/End: Complemental strand, 11393395 - 11393236
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||||||| |||| || |||||||||| |    
T  11393395 tgtaacaccccgtttcccaaaagtatttaaatataaaatattcatcagagtaattcatcaaacgggcatgctacactacattttcaagatttcttaaaga 11393296  T
Q  274 acatatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattatt 333  Q
     ||||||||||||||||| ||||| |||||| ||||||| ||  ||||||||||| ||||    
T  11393295 gcatatgaaactatttaaataaacaactttcaaacatcaatagtcttgcagcggaatatt 11393236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 14417384 - 14417265
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||| ||||||||||| |||||||    
T  14417384 atgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacattttaaaattttttaaata 14417285  T
Q  274 acatatgaaactatttaatt 293  Q
      | ||||||||||||||||    
T  14417284 gaaaatgaaactatttaatt 14417265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 29327419 - 29327518
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcacca-aacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||||||| |  || || ||||||||||||||||||| ||| |||||||||||||||    
T  29327419 tgtaacaccccgttacccaaaagtaattaaatataaaatatttatcagagtaattcatcagaacgggcatgctacactacatttcaaaatttcttaaata 29327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 7004915 - 7004841
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  7004915 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 7004841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 16258904 - 16258978
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  16258904 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 16258978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 16267696 - 16267622
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  16267696 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 16267622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 23116517 - 23116591
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  |||||| ||||||||||| |||||||||||||||||||||    
T  23116517 tgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagttaagcaccaaacgggcatgctaca 23116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 40145123 - 40145039
Alignment:
Q  166 gcatgatatatgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| |||||||||| ||||||||||    
T  40145123 gcatgttatttgtaacaccccgttacccaaaagtaattaaataataattattcatcagagttaagcaccaaacgagcatgctaca 40145039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 14747321 - 14747247
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||| ||||||||||| |||||||||||||||||||||    
T  14747321 tgtaacaccccgttacccaaaagtaattaaataacaattatacatcagagttaagcaccaaacgggcatgctaca 14747247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 20890898 - 20890780
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||||| |||||||  ||||| | |||||||||| ||||| ||||||||||||||| | |   ||||||||||||||||||    
T  20890898 tgtaacaccccgttacccaaaagtaattaaataacaaatactaatcagagttaagcacc-aacgggcatgctacattgcaaatttaaaatttcttaaata 20890800  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  20890799 gaaaataaaactatttaatt 20890780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 29299900 - 29299817
Alignment:
Q  176 tgtaacaccccgttac-caaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt 258  Q
    |||||||||||| ||| |||||||| |||| | ||| |||||||||||||| |  |||||||||||||||||||||||| ||||    
T  29299900 tgtaacaccccgctactcaaaagtaattaattgtaacatattcatcagagtaattcaccaaacgggcatgctacactacatttt 29299817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 27889410 - 27889471
Alignment:
Q  330 tattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcct 391  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||| ||||||    
T  27889410 tattattcatcaaacatcaacaactattttaaaactccaaacaatatcttggcataaagcct 27889471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 27948068 - 27948129
Alignment:
Q  330 tattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcct 391  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||| ||||||    
T  27948068 tattattcatcaaacatcaacaactattttaaaactccaaacaatatcttggcataaagcct 27948129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 29644306 - 29644249
Alignment:
Q  235 aacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||| ||||||||||||    
T  29644306 aacgggcatgctacactacttttcaaaatttattaaataagatataaaactatttaat 29644249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 3225488 - 3225366
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||| |||||| ||||||| |||||||   |||| ||||||||||     ||||||| || |||||||| | |  ||| ||| ||||||||||     
T  3225488 tgtaacaccctgttacccaaaagtaattaaataacgaataatcatcagagtattttaccaaacaggtatgctacattgcagtttcaaaattcttaaatag 3225389  T
Q  275 catatgaaactatttaattaaac 297  Q
    |||||||||||||||||||||||    
T  3225388 catatgaaactatttaattaaac 3225366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 6587635 - 6587669
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  6587635 atcttggcattaagcctaatcaacaataagtcaac 6587669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 20984575 - 20984514
Alignment:
Q  232 ccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||| |||||||||||||||  |||||||||||||||||    
T  20984575 ccaaacgggcatgtcacactacatttttaaaatttcttaaatagaatatgaaactatttaat 20984514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 25702311 - 25702251
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    ||||||||||||||||||||| ||| |||| ||||||||||  | || |||||||||||||    
T  25702311 caaacgggcatgctacactacatttcaaaaattcttaaatagaaaataaaactatttaatt 25702251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 30767810 - 30767684
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaa 270  Q
    |||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  |||||    
T  30767810 atgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaa 30767712  T
Q  271 ata-acatatgaaactatttaattaaac 297  Q
    ||| | |||| |||||||||||||||||    
T  30767711 atagaaatataaaactatttaattaaac 30767684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 3696937 - 3697055
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||||| |||||||  ||||| | |||||||||| ||| | ||||||||||||||| | |   || |||||||||||||||    
T  3696937 tgtaacaccccgttacccaaaagtaattaaataacaaatactaatcagagttaagcatc-aacgggcatgctacattgcaaattcaaaatttcttaaata 3697035  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  3697036 gaaaataaaactatttaatt 3697055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 20005800 - 20005859
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| |||||||||||||    
T  20005800 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaatt 20005859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 21300895 - 21300832
Alignment:
Q  235 aacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    ||||||||||  ||||||| |||| |||||||||||||||  |||| |||||||||||||||||    
T  21300895 aacgggcatgtcacactacattttcaaaatttcttaaatagaatataaaactatttaattaaac 21300832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 22011909 - 22011787
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||| ||||| ||||| | | |||||| ||||| |||||||||| |  | |||||||||||||  ||||||| ||  ||| |||||||||||    
T  22011909 atgtaacaccccattacccaaaagcaatgaaatattaaataatcatcagagtaaatc-ccaaacgggcatgtcacactactttcaaaattttcttaaata 22011811  T
Q  274 acatatgaaactatttaattaaac 297  Q
      |||| |||||||||||| ||||    
T  22011810 gaatataaaactatttaataaaac 22011787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 23824562 - 23824612
Alignment:
Q  341 aaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  23824562 aaacatcaacaactgttt-aaacctccaaaataatatcttggcataaagcct 23824612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 27345022 - 27345097
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||| |||||| ||||||  | |||||||  ||||||| |||||||||| ||| |||||||||||||||||    
T  27345022 atgtaacactccgttatccaaaaacaattaaataacaaatattaatcagagttaagcatcaaacgggcatgctaca 27345097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 29306430 - 29306363
Alignment:
Q  191 ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt 258  Q
    |||||| || |||| | ||| |||||||||||||| |  |||||||||||||||||||||||| ||||    
T  29306430 ccaaaaataattaattgtaacatattcatcagagtaattcaccaaacgggcatgctacactacatttt 29306363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 40144935 - 40144881
Alignment:
Q  347 caacaactgtttaaaacctccaaataatatcttggcattaagcctaatcaacaata 402  Q
    ||||||| ||| ||| |||||||||||||||||||||| |||||||| ||||||||    
T  40144935 caacaacggttaaaatcctccaaataatatcttggcataaagcctaa-caacaata 40144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 406
Target Start/End: Original strand, 4979828 - 4979862
Alignment:
Q  372 aatatcttggcattaagcctaatcaacaataagtc 406  Q
    |||||||||||||||||||||| ||||||||||||    
T  4979828 aatatcttggcattaagcctaaacaacaataagtc 4979862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 25625498 - 25625436
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||||  ||||||| ||| |||||||||||||||  |||| | ||||||||||    
T  25625498 caccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataatactatttaat 25625436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 27345225 - 27345259
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||| ||||||    
T  27345225 atcttggcattaagcctaatcaacaataggtcaac 27345259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 6587429 - 6587494
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacggg 240  Q
    ||||||||||||||||| ||||  | |||||||  ||||||| |||||||||| ||||||||||||    
T  6587429 tgtaacaccccgttacccaaaaacaattaaataacaaatattaatcagagttaagcaccaaacggg 6587494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 6678150 - 6678278
Alignment:
Q  174 tatgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||||| |||||||  |||||| | |||| ||||||||||    ||||||||||| |||||||| | |  ||| ||| |||||||||    
T  6678150 tatgtaacaccccgttacccaaaagtaaataaata-acaataatcatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaattcttaaat 6678248  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    |  | || |||||||||||| |||| ||||    
T  6678249 agaaaataaaactatttaatcaaaccactt 6678278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 19852938 - 19853003
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| |||||| ||||| ||||    
T  19852938 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactacttaataaaac 19853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 19858974 - 19859039
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| |||||| ||||| ||||    
T  19858974 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactacttaataaaac 19859039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 21686846 - 21686786
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||| ||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  21686846 ccaaacggccatgtcacactacttttcaaaatttcttaaataggatataaaactatttaat 21686786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 21691170 - 21691110
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||| ||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  21691170 ccaaacggccatgtcacactacttttcaaaatttcttaaataggatataaaactatttaat 21691110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 33537207 - 33537243
Alignment:
Q  139 atttatatagaattaaaactaataaaagcatgatata 175  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  33537207 atttatatagaattaaaactaataaaaccatcatata 33537243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 30272587 - 30272465
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||| ||||| ||||||||||||||||||||||||| | | |||||||||||||||     
T  30272587 tgtaacaccccgttacccaaaagtaattaaatataacatattcatcaaagttaagcaccaaacgggcatgctacactacatatcaaaatttcttaaatag 30272488  T
Q  275 catatgaaactatttaattaaac 297  Q
    |||||||||||||||||||||||    
T  30272487 catatgaaactatttaattaaac 30272465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 176 - 391
Target Start/End: Complemental strand, 16844638 - 16844424
Alignment:
Q  176 tgtaacaccccgttaccaaaag-tatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaa-atttcttaaata 273  Q
    |||||||||||| |||| |||  || ||||||| || ||| |||||||||||| ||||||| ||||||||||||||||| |||| || ||||||||||||    
T  16844638 tgtaacaccccgctacccaaatataattaaatacaacataatcatcagagttaagcaccaa-cgggcatgctacactacattttcaagatttcttaaata 16844540  T
Q  274 acatatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattattattcaacaaacatcaacaactgtttaaaacctcc-aaata 372  Q
     ||||||||||||||||| ||||| |||||| ||||||| ||| ||||||||||| |||| | || | |||||||| || |  || |||||||| |||||    
T  16844539 gcatatgaaactatttaaataaacaactttcaaacatcaataatcttgcagcggaatatt-tgcatc-aacatcaataattactt-aaacctccaaaata 16844443  T
Q  373 atatcttggcattaagcct 391  Q
    |||||||||||||||||||    
T  16844442 atatcttggcattaagcct 16844424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 12460849 - 12460967
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||||| |  ||||||| |||||||||||||||| ||| |||||||||||||||     
T  12460849 tgtaacaccccgctacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaatgggcatgctacactacatttcaaaatttcttaaatag 12460948  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  12460949 aaaataaaactatttaatt 12460967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 13018867 - 13018985
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||| ||||| |  |||||||||||||||||||||||| ||| |||||||||||||||    
T  13018867 atgtaacaccccgttacccaaaagtaattaaatacaaaatattcataagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaata 13018966  T
Q  274 acatatgaaactatttaat 292  Q
      | || ||||||||||||    
T  13018967 gaaaataaaactatttaat 13018985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 13025575 - 13025692
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||| ||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  13025575 tgtaacaccccgttacccaaaagtaattaaatacaaaatattcattagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 13025674  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  13025675 aaaataaaactatttaat 13025692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 15454731 - 15454849
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||||||||||| |  |||||||| ||||||||||||||| ||| |||||||||||||||    
T  15454731 atgtaacaccccgttatccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacaggcatgctacactacatttcaaaatttcttaaata 15454830  T
Q  274 acatatgaaactatttaat 292  Q
      | || ||||||||||||    
T  15454831 gaaaataaaactatttaat 15454849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 19438653 - 19438770
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||| ||||| ||||| | ||||||| ||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  19438653 tgtaacaccccattacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 19438752  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  19438753 aaaataaaactatttaat 19438770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 384
Target Start/End: Original strand, 23518222 - 23518347
Alignment:
Q  259 aaaatttcttaaataacatatgaaactatttaattaaactactttc-gaacatcattaaacttgcagcggattattattcaacaaacatcaacaactgtt 357  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| ||||||||||||| || ||||| ||| |||||||||||||  |||    
T  23518222 aaaatttcttaaatagcatatgaaactatttaattaaacaactttcaaaacatcgttaaacttgcagcagaatatta-tcatcaaacatcaacaatagtt 23518320  T
Q  358 taaaacctcc-aaataatatcttggcat 384  Q
    | |||||||| ||||| |||||||||||    
T  23518321 t-aaacctccaaaatattatcttggcat 23518347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 15811437 - 15811535
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||| | ||||||| ||||||||||||||||| |  |||||||||||||||||||| ||| ||| |||||||||||||||    
T  15811437 tgtaacaccccgttacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctacaatacatttcaaaatttcttaaata 15811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 17469130 - 17469008
Alignment:
Q  171 atatatgtaacaccccgttaccaaaagt-atttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttctta 269  Q
    |||||||||||||||||||||| ||| | |||||| ||||| | |  ||||||||| || |||||||||||||||||||||||| ||| | |||||||||    
T  17469130 atatatgtaacaccccgttacccaaaatcatttaagtataacacaaacatcagagtaag-caccaaacgggcatgctacactacatttcagaatttctta 17469032  T
Q  270 aataacatatgaaactatttaatt 293  Q
    ||||  | || |||||||||||||    
T  17469031 aatagaaaataaaactatttaatt 17469008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 17584084 - 17584206
Alignment:
Q  171 atatatgtaacaccccgttaccaaaagt-atttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttctta 269  Q
    |||||||||||||||||||||| ||| | |||||| ||||| | |  ||||||||| || |||||||||||||||||||||||| ||| | |||||||||    
T  17584084 atatatgtaacaccccgttacccaaaatcatttaagtataacacaaacatcagagtaag-caccaaacgggcatgctacactacatttcagaatttctta 17584182  T
Q  270 aataacatatgaaactatttaatt 293  Q
    ||||  | || |||||||||||||    
T  17584183 aatagaaaataaaactatttaatt 17584206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 2389416 - 2389342
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  2389416 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 2389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 13454617 - 13454543
Alignment:
Q  176 tgtaacaccccgttac-caaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    |||||||||||||||| |||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  13454617 tgtaacaccccgttacacaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 13454543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 21756645 - 21756719
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  21756645 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 21756719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 37379238 - 37379312
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  37379238 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 37379312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 49149207 - 49149281
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||| ||||| |||||||||||||||||||||    
T  49149207 tgtaacaccccgttacccaaaagtaattaaatagcaattattcatcaaagttacgcaccaaacgggcatgctaca 49149281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 13594025 - 13594155
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaa--cgggcatgctacactaccttttaaaatttcttaaa 271  Q
    |||||||||||||||||| |||||||  ||||||  ||||| |||||||||| |  |||||||  |||| |||||||| | |  | | ||| ||||||||    
T  13594025 atgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccaaaaacgggtatgctacattgcaatatcaaaattcttaaa 13594124  T
Q  272 taacatatgaaactatttaattaaactactt 302  Q
    || ||||||||||||||||||||||| ||||    
T  13594125 tagcatatgaaactatttaattaaaccactt 13594155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 20020532 - 20020414
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||| ||||  | |||||||  ||||||||||||||||    ||| | |||||||||||||||||| |||||||| ||||||||||    
T  20020532 atgtaacaccccgttacccaaaaacaattaaataacaaatattcatcagagtacttcac-atacgggcatgctacactacattttaaaaattcttaaata 20020434  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  20020433 gaaaataaaactatttaatt 20020414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 13019095 - 13019157
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||||||||||||| ||| |||||||||||||||  | || ||||||||||||    
T  13019095 caccaaacgggcatgctacactacatttcaaaatttcttaaatagaaaataaaactatttaat 13019157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 25157775 - 25157849
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  ||| || ||||||||||| ||||||||||| |||||||||    
T  25157775 tgtaacaccccgttacccaaaagtaattaaataacaaacatacatcagagttaagcaccaaacggacatgctaca 25157849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 49149379 - 49149446
Alignment:
Q  342 aacatcaacaactgt-ttaaaacctccaaataatatcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||| |||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||| |||||    
T  49149379 aacaacaacaactgtgttaaaatctccaattaatatcttggcattaagcctaa-caacaataaatcaac 49149446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 11339098 - 11339221
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| |||||||  ||||||  ||||||||    ||||||||||| |||||||| | |  ||| |||| ||||||||||    
T  11339098 tgtaacaccccgttacccaaaagtaattaaataacaaatatatatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaaattcttaaata 11339197  T
Q  274 acatatgaaactatttaattaaac 297  Q
      | ||||||||||||||||||||    
T  11339198 gaaaatgaaactatttaattaaac 11339221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 11835474 - 11835593
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacc-ttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| | |||||  || || ||||||||||||  ||||| ||||||||||||||  ||| |||  ||||||||||||||    
T  11835474 tgtaacaccccgttacccaaaagtaataaaataacaattaatcatcagagttaaacaccatacgggcatgctacatcaccatttctaaatttcttaaata 11835573  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  11835574 gaaaataaaactatttaatt 11835593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 20020331 - 20020297
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  20020331 atcttggcattaagcctaatcaacaataagtcaac 20020297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 46682981 - 46682864
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||| || |||| | |||||||  |||||  |||||||||    ||||||||| | |||  ||||||| |||||||||||||||||||     
T  46682981 tgtaacaccccgttatcccaaagcaattaaataataaataaacatcagagtataccaccaaacgtgtatgtcacactactttttaaaatttcttaaatag 46682882  T
Q  275 catatgaaactatttaat 292  Q
     |||| ||||||||||||    
T  46682881 aatataaaactatttaat 46682864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 2438206 - 2438334
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| || ||||  ||||||  ||||||||    ||||||||||| |||||||| | |  ||| |||| ||||||||||    
T  2438206 tgtaacaccccgttacccaaaagtaattcaataacaaatatatatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaaattcttaaata 2438305  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
      | |||||||||||||||||||| ||||    
T  2438306 gaaaatgaaactatttaattaaaccactt 2438334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 4279281 - 4279406
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa--tttcttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| |||  |||||||||    
T  4279281 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 4279379  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  4279380 tagaaatataaaactatttaattaaac 4279406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 13454439 - 13454385
Alignment:
Q  347 caacaactgtttaaaacctccaaataatatcttggcattaagcctaatcaacaata 402  Q
    ||||||| ||| ||| |||||||||||||||||||||| |||||||| ||||||||    
T  13454439 caacaacggttaaaatcctccaaataatatcttggcataaagcctaa-caacaata 13454385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 16074711 - 16074636
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||   |||||||||||||||  ||||| | ||| |||||||||||||||  |||| ||||||||||||    
T  16074711 catcagagtttatcaccaaacgggcatgtcacactgcttttcaaaatttcttaaatagaatataaaactatttaat 16074636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 19615613 - 19615738
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa--tttcttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| |||  |||||||||    
T  19615613 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 19615711  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  19615712 tagaaatataaaactatttaattaaac 19615738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 21756824 - 21756878
Alignment:
Q  347 caacaactgtttaaaacctccaaataatatcttggcattaagcctaatcaacaata 402  Q
    ||||||| ||| ||| |||||||||||||||||||||| |||||||| ||||||||    
T  21756824 caacaacggttaaaatcctccaaataatatcttggcataaagcctaa-caacaata 21756878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 3327182 - 3327248
Alignment:
Q  232 ccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    |||||||||||||  ||||||| |||| |||||||||||||||  |||| |||||||||||| ||||    
T  3327182 ccaaacgggcatgtcacactacattttcaaaatttcttaaatagaatataaaactatttaataaaac 3327248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 12546565 - 12546682
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa-tttcttaaata 273  Q
    ||||||||||||||| || |||| | |||||||| ||||| | |||||||| |  | |||||||||||||  ||||||| ||| |||| |||||||||||    
T  12546565 tgtaacaccccgttatcccaaagcaattaaatattaaataattatcagagtaaatc-ccaaacgggcatgtcacactacttttcaaaattttcttaaata 12546663  T
Q  274 acatatgaaactatttaat 292  Q
      |||| ||||||||||||    
T  12546664 gaatataaaactatttaat 12546682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 12694045 - 12694103
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  12694045 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 12694103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 15098682 - 15098624
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  15098682 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 15098624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 2026900 - 2026863
Alignment:
Q  369 aataatatcttggcattaagcctaatcaacaataagtc 406  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  2026900 aataacatcttggcattaagcctaaacaacaataagtc 2026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 295
Target Start/End: Complemental strand, 11900485 - 11900364
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    ||||||| ||||||||| ||||||| |||||||  ||||||  ||||||||    ||||||||||| |||||||| | |  ||| |||| ||||||||||    
T  11900485 tgtaacatcccgttacccaaaagtaattaaataacaaatatatatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaaattcttaaata 11900386  T
Q  274 acatatgaaactatttaattaa 295  Q
      | ||||||||||||||||||    
T  11900385 gaaaatgaaactatttaattaa 11900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 409
Target Start/End: Complemental strand, 17468930 - 17468885
Alignment:
Q  364 ctccaaataatatcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||| |||||||| ||||||||||||| ||||||||| |||||    
T  17468930 ctccaaacaatatctttgcattaagcctaaacaacaataaatcaac 17468885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 409
Target Start/End: Original strand, 17584284 - 17584329
Alignment:
Q  364 ctccaaataatatcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||| |||||||| ||||||||||||| ||||||||| |||||    
T  17584284 ctccaaacaatatctttgcattaagcctaaacaacaataaatcaac 17584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 46624286 - 46624363
Alignment:
Q  217 catcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    ||||||||||  |||||||| ||||||||  ||||||| ||| |||||||||||||||  |||| |||||| ||||||    
T  46624286 catcagagtttagcaccaaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactacttaatt 46624363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 20328948 - 20328912
Alignment:
Q  259 aaaatttcttaaataacatatgaaactatttaattaa 295  Q
    |||||||||||||||| |||| |||||||||||||||    
T  20328948 aaaatttcttaaataaaatataaaactatttaattaa 20328912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 26114618 - 26114490
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    ||||||||||||||||| ||||  | |||||||  ||||| |||||||||     ||||||||||| |||||||| | |  ||| |||||||||||||||    
T  26114618 tgtaacaccccgttacccaaaacaaattaaataacaaataatcatcagaggatttcaccaaacgggtatgctacattgcaatttcaaaatttcttaaata 26114519  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
      | || ||||||||||||||||| ||||    
T  26114518 gaaaataaaactatttaattaaaccactt 26114490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 26121219 - 26121091
Alignment:
Q  176 tgtaacaccccgttac-caaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    |||||||||||||||| |||||  | |||||||  ||||| ||||||||||    |||||||| || |||||||| | |  ||| |||||||||||||||    
T  26121219 tgtaacaccccgttactcaaaacaaattaaataacaaataatcatcagagtatttcaccaaacaggtatgctacattgcaatttcaaaatttcttaaata 26121120  T
Q  274 acatatgaaactatttaattaaactactt 302  Q
      | || ||||||||||||||||| ||||    
T  26121119 gaaaataaaactatttaattaaaccactt 26121091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 389
Target Start/End: Original strand, 21920142 - 21920352
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||||| |||  ||||||||||| |||||||||||||||| |||||||| ||| |||||| ||||||||     
T  21920142 tgtaacaccccgttacccaaaagtaattaaatataacataaacatcagagttaagcaccaaacgggcatgttacactacatttcaaaattccttaaatag 21920241  T
Q  275 catatgaaactatttaattaaactactttcgaacatcattaaacttgcagcggattatt--attcaacaaacatcaacaactgtttaaaacctccaaata 372  Q
    |||||  |||||||||| ||||| ||| || ||||||| ||||||||||||||| ||||   |||    ||||||||||| | ||| |||||||| ||||    
T  21920242 catatataactatttaaataaacaactgtcaaacatcaataaacttgcagcggaatatttgtttc----aacatcaacaattattt-aaacctcc-aata 21920335  T
Q  373 atatcttggcattaagc 389  Q
    |||||||||||||||||    
T  21920336 atatcttggcattaagc 21920352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 36614333 - 36614458
Alignment:
Q  176 tgtaacaccccgtta--ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaat 272  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||| ||||||||||||||    
T  36614333 tgtaacaccccgttatcccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacattttcaaaatttcttaaat 36614432  T
Q  273 aacatatgaaactatttaattaaact 298  Q
    |  | || | |||||||||| |||||    
T  36614433 agaaaataatactatttaataaaact 36614458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 24241270 - 24241155
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||| ||||||||| || |||| ||||||||||||||||| |  || ||||||||||||||||||||| ||| |||||||||||||||     
T  24241270 tgtaacaccccgttatccaaaagtaatttaatacaaaatattcatcagagtaattcatcaaacgggcatgctacactacatttcaaaatttcttaaatag 24241171  T
Q  275 catatgaaactattta 290  Q
     | || ||||||||||    
T  24241170 aaaataaaactattta 24241155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 21948757 - 21948875
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||  ||||||||||||||||    |||||||||||||||||||||||| ||| ||| |||||||||||     
T  21948757 tgtaacaccccgttacccaaaagtaattaaataacaaatattcatcagagtatttcaccaaacgggcatgctacactacatttcaaattttcttaaatag 21948856  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  21948857 aaaataaaactatttaatt 21948875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 21962318 - 21962436
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||  ||||||||||||||||    |||||||||||||||||||||||| ||| ||| |||||||||||     
T  21962318 tgtaacaccccgttacccaaaagtaattaaataacaaatattcatcagagtatttcaccaaacgggcatgctacactacatttcaaattttcttaaatag 21962417  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  21962418 aaaataaaactatttaatt 21962436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 24849415 - 24849533
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| ||| |  || ||||||||||||||||||||| ||| |||||||||||||||     
T  24849415 tgtaacaccccgttacccaaaagtaattaaataacaaatattcatcaaagtaattcaacaaacgggcatgctacactacatttcaaaatttcttaaatag 24849514  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  24849515 aagataaaactatttaatt 24849533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 36917085 - 36917202
Alignment:
Q  176 tgtaacaccccgttaccaaaagt-atttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||| | |||||||||||| |||  ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||||     
T  36917085 tgtaacaccccgttacccaaaatcatttaaatataacataaacatcagagtaag-caccaaacgggcatgctacactacatttcaaaatttcttaaatag 36917183  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  36917184 aaaataaaactatttaatt 36917202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 49327374 - 49327491
Alignment:
Q  176 tgtaacaccccgttaccaa-aagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| | ||| | ||||||| |||||||||||| |||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  49327374 tgtaacaccccgttacccagaagcaattaaatacaaaatattcatccgagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 49327473  T
Q  275 catatgaaactatttaat 292  Q
     | || ||||||||||||    
T  49327474 aaaataaaactatttaat 49327491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 298
Target Start/End: Original strand, 43087759 - 43087880
Alignment:
Q  179 aacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaataaca 276  Q
    |||||||||||| || ||| || ||||||||||||||||||||||||| |  |||||||| ||||| ||||||||| |||| |||||||||||||||  |    
T  43087759 aacaccccgttatcccaaaataattaaatataaaatattcatcagagtaattcaccaaacaggcatcctacactacattttcaaaatttcttaaatagaa 43087858  T
Q  277 tatgaaactatttaattaaact 298  Q
     || | |||||||||| |||||    
T  43087859 aataatactatttaataaaact 43087880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 38133543 - 38133618
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    |||||||||||| ||||| ||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  38133543 atgtaacaccccattacccaaaagtaattaaataacaattattcatcagagttaagcaccaaacgggcatgctaca 38133618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 20397700 - 20397578
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||||| |||||||   |||| ||||||||||     |||||||||| |||||||| | |  ||| ||| ||||||||||     
T  20397700 tgtaacaccccgttacccaaaagtaattaaataacgaataatcatcagagtattttaccaaacgggtatgctacattgcagtttcaaaattcttaaatag 20397601  T
Q  275 catatgaaactatttaattaaac 297  Q
    |||||||||||||||||||||||    
T  20397600 catatgaaactatttaattaaac 20397578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 29152187 - 29152072
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||| | |||||||  |||||||||||||||| |  |  ||||||||||||||||||  | ||| |||||||||||||||     
T  29152187 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaaacgggcatgctacacgtcatttcaaaatttcttaaatag 29152088  T
Q  275 catatgaaactattta 290  Q
     | || ||||||||||    
T  29152087 aaaataaaactattta 29152072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 1527601 - 1527472
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcacca--aacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||| |||||||  ||||||  ||||| |||||||||| |  |||||  |||||| |||||||| | |  | | ||| |||||||||    
T  1527601 tgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccagaaacgggtatgctacattgcaatatcaaaattcttaaat 1527502  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    | ||||||||||||||||||||||| ||||    
T  1527501 agcatatgaaactatttaattaaaccactt 1527472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 36212812 - 36212683
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcacca--aacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||| |||||||||  ||||||  ||||| |||||||||| |  |||||  |||||| |||||||| | |  | | ||| |||||||||    
T  36212812 tgtaacaccccgttatccaaaagtaaataaataacaaataatcatcagagtaattcaccagaaacgggtatgctacattgcaatatcaaaattcttaaat 36212713  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    | ||||||||||||||||||||||| ||||    
T  36212712 agcatatgaaactatttaattaaaccactt 36212683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 37674645 - 37674718
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| ||||| |||||||||||||||    
T  37674645 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcacc-aacgggcatgctaca 37674718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 37681338 - 37681411
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||| ||||| |||||||||||||||    
T  37681338 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagttaagcacc-aacgggcatgctaca 37681411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 19960607 - 19960664
Alignment:
Q  235 aacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||| ||||||||||||    
T  19960607 aacgggcatgctacactacttttcaaaatttattaaataagatataaaactatttaat 19960664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 42625471 - 42625588
Alignment:
Q  178 taacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaataac 275  Q
    ||||||||||||||| ||||| | |||||||  ||||||| |||||||||| ||||||||||||||||| ||| | |   || |||||||||||||||      
T  42625471 taacaccccgttacccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacgggcatgccacattgcaaattcaaaatttcttaaataga 42625570  T
Q  276 atatgaaactatttaatt 293  Q
    | || |||||||||||||    
T  42625571 aaataaaactatttaatt 42625588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 52990029 - 52990148
Alignment:
Q  176 tgtaacaccccgttaccaaaagt-atttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||| | | |||||||  ||||||| |||||||||| ||||||||||||||||| ||| | |   || |||||||||||||||    
T  52990029 tgtaacaccccgttacccaaaatcaattaaataacaaatattaatcagagttaagcaccaaacgggcatgccacattgcaaattcaaaatttcttaaata 52990128  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  52990129 gaaaataaaactatttaatt 52990148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 20292185 - 20292219
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  20292185 atcttggcattaagcctaatcaacaataagtcaac 20292219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 20298863 - 20298897
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  20298863 atcttggcattaagcctaatcaacaataagtcaac 20298897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 31928145 - 31928083
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  31928145 caccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 31928083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 36213671 - 36213542
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcacca--aacgggcatgctacactaccttttaaaatttcttaaat 272  Q
    ||||||||||||||||| |||||||  ||||||  ||||| |||||||||| |  || ||  |||||| |||||||| | |  | | ||| |||||||||    
T  36213671 tgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagtaattcatcagaaacgggtatgctacattgcaatatcaaaattcttaaat 36213572  T
Q  273 aacatatgaaactatttaattaaactactt 302  Q
    | ||||||||||||||||||||||| ||||    
T  36213571 agcatatgaaactatttaattaaaccactt 36213542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 52990231 - 52990265
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  52990231 atcttggcattaagcctaatcaacaataagtcaac 52990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 29597548 - 29597425
Alignment:
Q  282 aactatttaattaaactactttcgaacatcattaaacttgcagcggattatta--ttcaacaaacatcaacaactgtttaaaacctccaaataatatctt 379  Q
    |||||||||| ||||| ||| || ||||||| ||||||||||||||| ||||   ||||| |    ||||||| | |||||| | ||||| |||||||||    
T  29597548 aactatttaaataaacaactgtcaaacatcaataaacttgcagcggaatatttgtttcaata----tcaacaattatttaaatc-tccaa-taatatctt 29597455  T
Q  380 ggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||| ||||||||| |||||    
T  29597454 ggcattaagcctaaacaacaataaatcaac 29597425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 4230561 - 4230608
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatat 279  Q
    |||||||||||||||||||||| ||| ||||||| |||||||| ||||    
T  4230561 ccaaacgggcatgctacactacgtttcaaaatttattaaataaaatat 4230608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 21541446 - 21541496
Alignment:
Q  341 aaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  21541446 aaacatcaacaactgttt-aaacctccaaaataatatcttggcataaagcct 21541496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 24076885 - 24076935
Alignment:
Q  341 aaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  24076885 aaacatcaacaactgttt-aaacctccaaaataatatcttggcataaagcct 24076935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 42096762 - 42096637
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  42096762 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 42096664  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  42096663 tagaaatataaaactatttaattaaac 42096637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 47483645 - 47483714
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||| |||||| || ||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||    
T  47483645 gcagcggaatattat-cagcaaacatcaacaagtgttt-aaacctccaaaataatatcttggcataaagcct 47483714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 11141735 - 11141677
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  11141735 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 11141677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 20291982 - 20292056
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||| ||||||||| |||||||  | ||||| ||||||||||  |||||| |||| ||||||||    
T  20291982 tgtaacaccccgttacccaaaagtaattaaataacagatattaatcagagttaaacaccaatcgggtatgctaca 20292056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 20942642 - 20942524
Alignment:
Q  176 tgtaacaccccgttaccaaaagtatttaaatataaaata-ttcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaata 273  Q
    |||||||||||||| ||||||  | |||| ||  ||||| ||||||||||| |    |||||||||||||  ||||||| |||| |||||||||||||||    
T  20942642 tgtaacaccccgttcccaaaatcaattaattaataaataattcatcagagtaataacccaaacgggcatgtcacactacattttcaaaatttcttaaata 20942543  T
Q  274 acatatgaaactatttaat 292  Q
      |||| ||||||||||||    
T  20942542 gaatataaaactatttaat 20942524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 21697583 - 21697641
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  21697583 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 21697641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 30492238 - 30492176
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||||  ||||| | ||| |||||||||||||||  |||| ||||||||||||    
T  30492238 caccaaacgggcatgtcacactgcttttaaaaatttcttaaatagaatataaaactatttaat 30492176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 23711933 - 23711978
Alignment:
Q  247 acactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||| |||||||||||||||||||  |||| ||||||||||||    
T  23711933 acactactttttaaaatttcttaaatagaatataaaactatttaat 23711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 409
Target Start/End: Original strand, 36917280 - 36917325
Alignment:
Q  364 ctccaaataatatcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||| ||||||||||||||||| |||| ||||||||| |||||    
T  36917280 ctccaaacaatatcttggcattaagtctaaacaacaataaatcaac 36917325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 20639660 - 20639783
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt-cttaaat 272  Q
    ||||||||||||||||| ||||| | ||||||| | ||| || ||||||||| |  | |||| ||||||||  ||||||| |||| |||||| |||||||    
T  20639660 tgtaacaccccgttacccaaaagcaattaaataattaaacatacatcagagtaaacccccaa-cgggcatgtcacactacattttcaaattttcttaaat 20639758  T
Q  273 aacatatgaaactatttaattaaac 297  Q
    |  |||| |||||||||||||||||    
T  20639759 agaatataaaactatttaattaaac 20639783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 21411416 - 21411356
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| ||| |||||||||||  |||| ||||||||||||    
T  21411416 ccaaacgggcatgtcacactacttttcaaattttcttaaatagaatataaaactatttaat 21411356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 1335 - 1454
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||| ||||||||||| |||||||    
T  1335 atgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacattttaaaattttttaaata 1434  T
Q  274 acatatgaaactatttaatt 293  Q
      | ||||||||||||||||    
T  1435 gaaaatgaaactatttaatt 1454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 1638 - 1760
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||| |||| ||||||| |||||||||| ||| |||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||     
T  1638 tgtaacaccccgctacccaaaagtaattaaatataacataatcatcagagttaagcaccaaacgggcatgttacattacatttcaaaatttcttaaatag 1737  T
Q  275 catatgaaactatttaattaaac 297  Q
    ||||||| |||||||||||||||    
T  1738 catatgagactatttaattaaac 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 11465454 - 11465571
Alignment:
Q  176 tgtaacaccccgttaccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataac 275  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||      
T  11465454 tgtaacaccccgctacccaaagtatttaaatataaaacattcatcagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaataga 11465553  T
Q  276 atatgaaactatttaatt 293  Q
    | || |||||||||||||    
T  11465554 aaataaaactatttaatt 11465571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 201 - 333
Target Start/End: Complemental strand, 32912271 - 32912138
Alignment:
Q  201 ttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaacta 299  Q
    |||||||||||||| ||||||||||||  || |||||||| |||||||| ||| |||| |||||||||||||||||||||| |||||||||||||||| |    
T  32912271 ttaaatataaaataatcatcagagttaaacatcaaacgggtatgctacattacattttcaaaatttcttaaataacatatg-aactatttaattaaacca 32912173  T
Q  300 ctttc-gaacatcattaaacttgcagcggattatt 333  Q
    |||||  ||||||||||| ||||||||||| ||||    
T  32912172 ctttcaaaacatcattaatcttgcagcggaatatt 32912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 45027841 - 45027959
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||| ||||||||| || |||| ||||||||||||||||| |  || ||||||||||||||||||| | | | |||||||||||||||     
T  45027841 tgtaacaccccgttatccaaaagtaatttaatacaaaatattcatcagagtaattcatcaaacgggcatgctacacttcatctcaaaatttcttaaatag 45027940  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  45027941 aaaataaaactatttaatt 45027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 27036552 - 27036627
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    |||||||||||||||||| ||||||| |||||||  |||||| ||||||||||| |||||||||||||||||||||    
T  27036552 atgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagttaagcaccaaacgggcatgctaca 27036627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 24427666 - 24427592
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  |||||| ||||||||||| |||||||||||||||||||||    
T  24427666 tgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagttaagcaccaaacgggcatgctaca 24427592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 25590799 - 25590729
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||||||| |||||| || ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  25590799 gcagcggaatattat-catcaaacatcaacaattgtttaaa-cctccaaataatatcttggcataaagcctaa 25590729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 2386730 - 2386672
Alignment:
Q  191 ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||| |||||||  |||||| ||||||||||| |||||||||||||||||||||    
T  2386730 ccaaaagtaattaaataacaaatatacatcagagttaagcaccaaacgggcatgctaca 2386672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 199959 - 200084
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa--tttcttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| ||||| || ||||||||| |  | |||||||||||||  ||||||| |||| |||  |||||||||    
T  199959 tgtaacaccccgttacccaaaagtaattaaataataaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 200057  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  200058 tagaaatataaaactatttaattaaac 200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 36800052 - 36800103
Alignment:
Q  341 aaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  36800052 aaacatcaacaactgtttaaaacctccaaaagaatatcttggcataaagcct 36800103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 6745183 - 6745058
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  6745183 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 6745085  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  6745084 tagaaatataaaactatttaattaaac 6745058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 17967131 - 17967006
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  17967131 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 17967033  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  17967032 tagaaatataaaactatttaattaaac 17967006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 22013926 - 22013811
Alignment:
Q  180 acaccccgttacca-aaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca-ctaccttttaaaatttcttaaataacat 277  Q
    |||||||||||||  |||||| |||||||  || ||  ||||||||||| ||||||||||||||||||||| |    ||| |||||||||||||||  |     
T  22013926 acaccccgttaccccaaagtaattaaataacaattacacatcagagttaagcaccaaacgggcatgctacatcgcaatttcaaaatttcttaaatagaaa 22013827  T
Q  278 atgaaactatttaatt 293  Q
    || |||||||||||||    
T  22013826 ataaaactatttaatt 22013811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 35244827 - 35244708
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||| | |||||||  ||||||| |||||||||| ||||||||| | ||||| ||| | |   || |||||||||||||||    
T  35244827 tgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacagacatgccacattgcaaattcaaaatttcttaaata 35244728  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  35244727 gaaaataaaactatttaatt 35244708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 43692883 - 43692933
Alignment:
Q  341 aaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  43692883 aaacatcaacaactgttt-aaacctccaaaataatatcttggcataaagcct 43692933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 22013730 - 22013696
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||| ||||||||||||    
T  22013730 atcttggcattaagcctaatcatcaataagtcaac 22013696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 22859747 - 22859807
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||   ||| ||||||||||||    
T  22859747 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaat 22859807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 23263429 - 23263488
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  23263429 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatat-aaactatttaat 23263488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 23268645 - 23268704
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  23268645 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatat-aaactatttaat 23268704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 24644247 - 24644307
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||   ||| ||||||||||||    
T  24644247 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaat 24644307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 25266753 - 25266813
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| ||| |||||||||||  |||| ||||||||||||    
T  25266753 ccaaacgggcatgtcacactacttttcaaattttcttaaatagaatataaaactatttaat 25266813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 28292086 - 28292154
Alignment:
Q  235 aacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaactactt 302  Q
    |||||||||||||||| | | ||| |||||||||||||||  | || ||||||||||||||||| ||||    
T  28292086 aacgggcatgctacaccatcatttcaaaatttcttaaatagaaaataaaactatttaattaaacaactt 28292154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 16043 - 15926
Alignment:
Q  176 tgtaacaccccgttaccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataac 275  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||| ||||| |  |||||||||||||||||||||||| ||| |||||||||||||||      
T  16043 tgtaacaacccgttacccaaagtatttaaatataaaacattcattagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaataga 15944  T
Q  276 atatgaaactatttaatt 293  Q
    | || |||||||||||||    
T  15943 aaataaaactatttaatt 15926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 28539 - 28422
Alignment:
Q  176 tgtaacaccccgttaccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataac 275  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||| ||||| |  |||||||||||||||||||||||| ||| |||||||||||||||      
T  28539 tgtaacaacccgttacccaaagtatttaaatataaaacattcattagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaataga 28440  T
Q  276 atatgaaactatttaatt 293  Q
    | || |||||||||||||    
T  28439 aaataaaactatttaatt 28422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 252890 - 253013
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  252890 tgtaacaccccgtcacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 252989  T
Q  275 catatgaaactatttaattaaact 298  Q
     | || | |||||||||| |||||    
T  252990 aaaataatactatttaataaaact 253013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 246375 - 246447
Alignment:
Q  201 ttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaata 273  Q
    ||||||||||||||||||||||||| |  |||||||| ||||||||||||||| ||| |||||||||||||||    
T  246375 ttaaatataaaatattcatcagagtaattcaccaaacaggcatgctacactacatttcaaaatttcttaaata 246447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 644 - 542
Alignment:
Q  191 ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactattta 290  Q
    ||||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||||||| ||| |||||||||||||||  | || ||||||||||    
T  644 ccaaaagtaattaaatataaaatattcatcagagtaattcatcaaacgggcatgctacactacatttcaaaatttcttaaatagaaaataaaactattta 545  T
Q  291 att 293  Q
    |||    
T  544 att 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 6204 - 6322
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||| |||| ||||  | ||||||||||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  6204 tgtaacaccccgctacccaaaaacaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacactacatttcaaaatttcttaaatag 6303  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  6304 aaaataaaactatttaatt 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 31183 - 31301
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||||| ||||| | |||||||  |||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||||||     
T  31183 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattcaccaaacgggcatgctacactacgtttcaaaatttcttaaatag 31282  T
Q  275 catatgaaactatttaatt 293  Q
     | || |||||||||||||    
T  31283 aaaataaaactatttaatt 31301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 24350 - 24469
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||| ||||||||| ||||||| |||||||  ||||||| |||||||||| ||||||||||||||||||||| | |   || |||||||||||||||    
T  24350 tgtaacaacccgttacccaaaagtaattaaatagcaaatattaatcagagttaagcaccaaacgggcatgctacattgcaaattcaaaatttcttaaata 24449  T
Q  274 acatatgaaactatttaatt 293  Q
    | | || |||||||||||||    
T  24450 aaaaataaaactatttaatt 24469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 409
Target Start/End: Original strand, 24554 - 24586
Alignment:
Q  377 cttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||| ||||||||||||    
T  24554 cttggcattaagcctaatcatcaataagtcaac 24586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 1865 - 1744
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacac--taccttttaaaatttcttaaa 271  Q
    |||||||||||||||||| ||||| | |||||||  ||| |||||||||||| |  |||||||||||||||||| ||  ||| ||| |||||||||||||    
T  1865 atgtaacaccccgttacccaaaagcaattaaataacaaacattcatcagagtaattcaccaaacgggcatgctaaactatacgtttcaaaatttcttaaa 1766  T
Q  272 taacatatgaaactatttaatt 293  Q
    ||  | || |||||||||||||    
T  1765 tagaaaataaaactatttaatt 1744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 14485 - 14562
Alignment:
Q  174 tatgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||||||||||||| |  ||||||||||||||||||||    
T  14485 tatgtaacaccccgttacccaaaagcacttaaataataaaatattcatcagagtaattcaccaaacgggcatgctaca 14562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 18497 - 18572
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |  |||||||||| |||||||||    
T  18497 tgtaacaccccgttacccaaaagtacttaaataataaaatattcatcagagtaattcaccaaacggccatgctaca 18572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 393
Target Start/End: Original strand, 14671 - 14710
Alignment:
Q  354 tgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  14671 tgtttaaaacctccaaatcatatcttggcattaagcctaa 14710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 393
Target Start/End: Original strand, 18681 - 18720
Alignment:
Q  354 tgtttaaaacctccaaataatatcttggcattaagcctaa 393  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  18681 tgtttaaaacctccaaatcatatcttggcattaagcctaa 18720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 5491 - 5372
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    |||||||||||| |||| ||||||| |||||||  ||||||| |||||||||| |||||||||||| |||||||| | |   || |||||||||||||||    
T  5491 tgtaacaccccgatacccaaaagtaattaaataacaaatattaatcagagttaagcaccaaacgggtatgctacattgcaaattcaaaatttcttaaata 5392  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  5391 gaaaataaaactatttaatt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 5291 - 5257
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||| ||||||||||||||||||||||    
T  5291 atcttggcattatgcctaatcaacaataagtcaac 5257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 1733 - 1852
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacact-accttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| |||||||  | ||||| |||||||||| ||| ||||||||||||||||| | |   || |||||||||||||||    
T  1733 tgtaacaccccgttacccaaaagtaattaaataacagatattaatcagagttaagcatcaaacgggcatgctacattgaaaattcaaaatttcttaaata 1832  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  1833 gaaaataaaactatttaatt 1852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 1935 - 1969
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||| ||||||||||||    
T  1935 atcttggcattaagcctaatcatcaataagtcaac 1969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 513385 - 513266
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| |||||||  | ||||| |||||||||| ||| ||||||||||||||||| | |   || |||||||||||||||    
T  513385 tgtaacaccccgttacccaaaagtaattaaataacagatattaatcagagttaagcatcaaacgggcatgctacattgcaaattcaaaatttcttaaata 513286  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  513285 gaaaataaaactatttaatt 513266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 519802 - 519683
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||||| ||||||| |||||||  | ||||| |||||||||| ||| ||||||||||||||||| | |   || |||||||||||||||    
T  519802 tgtaacaccccgttacccaaaagtaattaaataatagatattaatcagagttaagcatcaaacgggcatgctacattgcaaattcaaaatttcttaaata 519703  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  519702 gaaaataaaactatttaatt 519683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 452472 - 452412
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||||||||||||||||||  |||| ||||||||||||    
T  452472 ccaaacgggcatgtcacactactttttaaaatttcttaaatagaatataaaactatttaat 452412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1752 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1752
Description:

Target: scaffold1752; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 355 - 281
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||||| |||||||  ||  || ||||||||||| |||||||||||||||||||||    
T  355 tgtaacaccccgttacccaaaagtaattaaataacaatcatacatcagagttaagcaccaaacgggcatgctaca 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 675 - 601
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||| | |||||||  ||||||| |||||||||| ||||||||||| |||||||||    
T  675 tgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacggacatgctaca 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 200 - 274
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctaca 249  Q
    ||||||||||||||||| ||||| | |||||||  || |||||||||||||||  ||||||||||||||||||||    
T  200 tgtaacaccccgttacccaaaagcaattaaataacaattattcatcagagttaatcaccaaacgggcatgctaca 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 12113 - 12175
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||||||||||| | ||| |||||||||||||||  |||| ||||||||||||    
T  12113 caccaaacgggcatgctacactgcttttcaaaatttcttaaatagaatataaaactatttaat 12175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 24659 - 24589
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgc 245  Q
    ||||||||||||||||| ||||| | |||||||  ||||||| |||||||||| |||||||||||||||||    
T  24659 tgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacgggcatgc 24589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Complemental strand, 24457 - 24423
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  24457 atcttggcattaagcctaatcaacaataagtcaac 24423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 17387 - 17507
Alignment:
Q  178 taacaccccgttaccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaataaca 276  Q
    ||||||||||||||| |||||| |||||||  ||||| ||||||||||    ||||||||||| |||||||| | |  ||| |||| ||||||||||  |    
T  17387 taacaccccgttacccaaagtaattaaataacaaataatcatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaaattcttaaatagaa 17486  T
Q  277 tatgaaactatttaattaaac 297  Q
     || |||||||||||||||||    
T  17487 aataaaactatttaattaaac 17507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 6563 - 6445
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||||||| ||||||||| |||||||  ||||| | |||||||||| ||||| ||||||||||||||| | |   || |||||||||||||||    
T  6563 tgtaacaccccgttacccaaaagtaattaaataacaaatactaatcagagttaagcacc-aacgggcatgctacattgcaaattcaaaatttcttaaata 6465  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  6464 gaaaataaaactatttaatt 6445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 14412 - 14527
Alignment:
Q  180 acaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacact-accttttaaaatttcttaaataacat 277  Q
    ||||||||||||| ||||| | |||||||  ||||||| |||||||||| ||||||||||||||||| ||| | |   || |||||||||||||||  |     
T  14412 acaccccgttacccaaaagcaattaaataacaaatattaatcagagttaagcaccaaacgggcatgccacattgaaaattcaaaatttcttaaatagaaa 14511  T
Q  278 atgaaactatttaatt 293  Q
    || |||||||||||||    
T  14512 ataaaactatttaatt 14527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 14613 - 14647
Alignment:
Q  375 atcttggcattaagcctaatcaacaataagtcaac 409  Q
    |||||||||||||||||||||||||||||||||||    
T  14613 atcttggcattaagcctaatcaacaataagtcaac 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 28658 - 28600
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| |||||||||||||||||||  |||| ||||||||||||    
T  28658 aaacgggcatgtcacactactttttaaaatttcttaaatagaatataaaactatttaat 28600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 1157 - 1092
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaact 298  Q
    ||||| |||||||||||||||||||| ||||||||||||||  | || | |||||||||| |||||    
T  1157 caaacaggcatgctacactaccttttcaaatttcttaaatagaaaataatactatttaatgaaact 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 355 - 278
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaata-ttcatcagagttaggcaccaaacgggcatgctacact 251  Q
    ||||||||||||||| || |||  | |||||||| ||||| |||||||||||||  ||||||||||||||||||||||    
T  355 tgtaacaccccgttatcccaaaacaattaaatattaaataattcatcagagttaaacaccaaacgggcatgctacact 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 6500 - 6561
Alignment:
Q  231 accaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||| |||||||  ||||||| |||||||||||||||||||  |||| ||||||||||||    
T  6500 accaaatgggcatgtcacactactttttaaaatttcttaaatagaatataaaactatttaat 6561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 8776 - 8841
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| |||||||||||| ||||    
T  8776 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaaac 8841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 56661 - 56600
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| |||||||||||||    
T  56661 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaatt 56600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 376 - 409
Target Start/End: Original strand, 103798 - 103831
Alignment:
Q  376 tcttggcattaagcctaatcaacaataagtcaac 409  Q
    ||||||||||||||||||||||||||||||||||    
T  103798 tcttggcattaagcctaatcaacaataagtcaac 103831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 103596 - 103715
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactac-cttttaaaatttcttaaata 273  Q
    ||||||||||| ||||| ||||| | |||||||  || |||| |||||||||| ||||||||||||||||| ||| | |   || |||||||||||||||    
T  103596 tgtaacacccctttacccaaaagcaattaaataacaattattaatcagagttaagcaccaaacgggcatgccacattgcaaattcaaaatttcttaaata 103695  T
Q  274 acatatgaaactatttaatt 293  Q
      | || |||||||||||||    
T  103696 gaaaataaaactatttaatt 103715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 146407 - 146523
Alignment:
Q  176 tgtaacaccccgttac-caaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||||||||| |||||| | |||||||  | ||| |||||||||| |  | |||||||||||||  ||||||| ||| |||||||||||||||     
T  146407 tgtaacaccccgttacacaaaagcaattaaataatatataatcatcagagtaaatc-ccaaacgggcatgtcacactacttttcaaaatttcttaaatag 146505  T
Q  275 catatgaaactatttaat 292  Q
      ||| ||||||||||||    
T  146506 attataaaactatttaat 146523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 175420 - 175295
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  175420 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 175322  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  175321 tagaaatataaaactatttaattaaac 175295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 198168 - 198107
Alignment:
Q  232 ccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| |||| |||||||||||||||  |||| ||||||||||||    
T  198168 ccaaacgggcatgtcacactacattttcaaaatttcttaaatagaatataaaactatttaat 198107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 208294 - 208233
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    |||||||||||||  ||||||| ||| |||||||||||||||  |||| |||||||||||||    
T  208294 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaatt 208233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 203 - 77
Alignment:
Q  175 atgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaa 270  Q
    |||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  |||||    
T  203 atgtaacaccccgttacccaaaagtaattaaataattaaacatgcatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaa 105  T
Q  271 ata-acatatgaaactatttaattaaac 297  Q
    ||| | |||| |||||||||||||||||    
T  104 atagaaatataaaactatttaattaaac 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 18158 - 18094
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    ||||||||||||  ||||||| ||| |||||||||||||||  |||| |||||||||||| ||||    
T  18158 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaaac 18094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 2 - 65
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    ||||||| |||  ||||||| ||| |||||||||||||||  |||| |||||||||||||||||    
T  2 aaacgggtatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaattaaac 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 291 - 166
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| ||||||  ||||||    
T  291 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 193  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  192 tagaaatataaaactatttaattaaac 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 4885 - 4766
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaat 272  Q
    |||||||||||||||| || |||| | |||||||  |||||  |||||||||    ||||||| ||||||||  ||||||| ||| ||||||||||||||    
T  4885 atgtaacaccccgttatcccaaagcaattaaataataaataaacatcagagtatatcaccaaaacgggcatgtcacactacttttcaaaatttcttaaat 4786  T
Q  273 aacatatgaaactatttaat 292  Q
    |  |||| ||||||||||||    
T  4785 agaatataaaactatttaat 4766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 7851 - 7788
Alignment:
Q  230 caccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    |||||||||||||||  ||||| | ||| |||||||||||||||  |||| |||||||||||||    
T  7851 caccaaacgggcatgtcacactgcttttcaaaatttcttaaatagaatataaaactatttaatt 7788  T

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Target: scaffold0260 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 14203 - 14076
Alignment:
Q  177 gtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactacctttt-aaaatttcttaaataa 274  Q
    |||||||||||||||| ||||||| || ||||  ||||||  ||||||||    ||||||||||| |||||||| | |  ||| |||| ||||||||||     
T  14203 gtaacaccccgttacccaaaagtaattcaataacaaatatatatcagagtatttcaccaaacgggtatgctacattgcaatttcaaaaattcttaaatag 14104  T
Q  275 catatgaaactatttaattaaactactt 302  Q
     | |||||||||||||||||||| ||||    
T  14103 aaaatgaaactatttaattaaaccactt 14076  T

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Target: scaffold0244 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 20069 - 20144
Alignment:
Q  217 catcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||   |||| ||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  20069 catcagagtttaacacccaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 20144  T

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Target: scaffold0104 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 22744 - 22694
Alignment:
Q  341 aaacatcaacaactgtttaaaacctccaaa-taatatcttggcattaagcct 391  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  22744 aaacatcaacaactgtttaaa-cctccaaaataatatcttggcataaagcct 22694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 40768 - 40837
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctcc-aaataatatcttggcattaagcct 391  Q
    |||||||| |||||| || ||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||    
T  40768 gcagcggaatattat-catcaaacatcaacaattgttt-aaacctccaaaataatatcttggcataaagcct 40837  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 87128 - 87253
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa--tttcttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | |||||||||||||  ||||||| |||| |||  |||||||||    
T  87128 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaaa 87226  T
Q  272 ta-acatatgaaactatttaattaaac 297  Q
    || | |||| |||||||||||||||||    
T  87227 tagaaatataaaactatttaattaaac 87253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 74816 - 74747
Alignment:
Q  321 gcagcggattattattcaacaaacatcaacaactgtttaaaacctccaaa-taatatcttggcattaagcct 391  Q
    |||||||| |||||| || ||||||||||||| |||||||| |||||||| |||||| ||||||||||||||    
T  74816 gcagcggaatattat-catcaaacatcaacaattgtttaaa-cctccaaaataatattttggcattaagcct 74747  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 369907 - 369978
Alignment:
Q  263 tttcttaaataacatatgaaactatttaattaaactactttc-gaacatcattaaacttgcagcggattatt 333  Q
    ||||||||||| ||||| |||||||||||||||||  |||||  |||||||||||  |||||||||| ||||    
T  369907 tttcttaaatagcatataaaactatttaattaaacatctttcaaaacatcattaattttgcagcggaatatt 369978  T

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Target: scaffold0395 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 4827 - 4769
Alignment:
Q  234 aaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  4827 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 4769  T

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Target: scaffold0355 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 2308 - 2184
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaata-taaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaattt--cttaaa 271  Q
    ||||||||||||||||| ||||||| ||||||| | ||| || ||||||||| |  | ||||||||| |||  ||||||| |||| ||||||  ||||||    
T  2308 tgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggtatgtcacactacattttcaaatttttcttaaa 2210  T
Q  272 taacatatgaaactatttaattaaac 297  Q
    ||  |||| |||||||||||||||||    
T  2209 tagaatataaaactatttaattaaac 2184  T

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Target: scaffold0298 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 1381 - 1315
Alignment:
Q  232 ccaaacgggcatgctacactacctttt-aaaatttcttaaataacatatgaaactatttaattaaac 297  Q
    |||||||||||||  ||||||| |||| |||||||||||||||  |||| |||||||||||| ||||    
T  1381 ccaaacgggcatgtcacactacattttcaaaatttcttaaatagaatataaaactatttaataaaac 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 173821 - 173700
Alignment:
Q  176 tgtaacaccccgttacc-aaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    |||||||||| |||||| ||||| | |||||||| ||||| |||||||||| |  | |||||||||||||  ||||||| ||  ||| |||||||||||     
T  173821 tgtaacaccctgttacccaaaagcaattaaatattaaataatcatcagagtaaatc-ccaaacgggcatgtcacactactttcaaaattttcttaaatag 173723  T
Q  275 catatgaaactatttaattaaac 297  Q
     |||| |||| ||||||| ||||    
T  173722 aatataaaaccatttaataaaac 173700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 675 - 791
Alignment:
Q  176 tgtaacaccccgtta-ccaaaagtatttaaatataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaatttcttaaataa 274  Q
    ||||||||||||||| || |||| | |||| ||  ||||| |||||||||| |    |||||||||||||  ||||||| ||| |||||||||||||||     
T  675 tgtaacaccccgttatcccaaagcaattaattaataaataatcatcagagtaataacccaaacgggcatgtcacactacttttcaaaatttcttaaatag 774  T
Q  275 catatgaaactatttaat 292  Q
     |||| ||||||||||||    
T  775 aatat-aaactatttaat 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 710 - 673
Alignment:
Q  214 attcatcagagttaggcaccaaacgggcatgctacact 251  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  710 attcatcagagttaaacaccaaacgggcatgctacact 673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 62515 - 62458
Alignment:
Q  235 aacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  62515 aacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 62458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 61746 - 61689
Alignment:
Q  235 aacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    ||||||||||  ||||||| ||| |||||||||||||||  |||| ||||||||||||    
T  61746 aacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaat 61689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 1644 - 1584
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||   ||| ||||||||||||    
T  1644 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaat 1584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 5569 - 5629
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| ||||||||||||||   |||| ||||||||||||    
T  5569 ccaaacgggcatgtcacactacttttcaaaatttcttaaatggaatataaaactatttaat 5629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 6208 - 6088
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaatataaaatatt-catcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaa 271  Q
    |||||||||||||||| || |||  | ||||||| |||||||  ||||||||||   ||||||| ||||||||  | ||||| ||| |||||||||||||    
T  6208 atgtaacaccccgttatcccaaaacaattaaataaaaaatataacatcagagtttaacaccaaaacgggcatgtcaaactacttttcaaaatttcttaaa 6109  T
Q  272 taacatatgaaactatttaat 292  Q
    ||  |||| ||||||||||||    
T  6108 tagaatataaaactatttaat 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 14110 - 13990
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaatataaaatatt-catcagagttaggcaccaaa-cgggcatgctacactaccttttaaaatttcttaaa 271  Q
    |||||||||||||||| || |||  | ||||||| |||||||  ||||||||||   ||||||| ||||||||  | ||||| ||| |||||||||||||    
T  14110 atgtaacaccccgttatcccaaaacaattaaataaaaaatataacatcagagtttaacaccaaaacgggcatgtcaaactacttttcaaaatttcttaaa 14011  T
Q  272 taacatatgaaactatttaat 292  Q
    ||  |||| ||||||||||||    
T  14010 tagaatataaaactatttaat 13990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 21156 - 21105
Alignment:
Q  340 caaacatcaacaactgtttaaaacctccaaa-taatatcttggcattaagcct 391  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||| ||||||    
T  21156 caaacatcaacaattgtttaaa-cctccaaaataatatcttggcataaagcct 21105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 27995 - 27944
Alignment:
Q  340 caaacatcaacaactgtttaaaacctccaaa-taatatcttggcattaagcct 391  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||| ||||||    
T  27995 caaacatcaacaattgtttaaa-cctccaaaataatatcttggcataaagcct 27944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 37718 - 37840
Alignment:
Q  175 atgtaacaccccgtta-ccaaaagtatttaaat-ataaaatattcatcagagttaggcaccaaacgggcatgctacactaccttttaaaa--tttcttaa 270  Q
    |||||||||||||||| ||||||||| |||||| || ||| || ||||||||| |  | |||||||||||||  ||||||| |||| |||  ||||||||    
T  37718 atgtaacaccccgttacccaaaagtaattaaataattaaacatacatcagagtaaatc-ccaaacgggcatgtcacactacattttcaaatttttcttaa 37816  T
Q  271 ata-acatatgaaactatttaatt 293  Q
    ||| | |||| |||||||||||||    
T  37817 atagaaatataaaactatttaatt 37840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 29241 - 29301
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  |||||||  || |||||||||||||||  |||| ||||||||||||    
T  29241 ccaaacgggcatgtcacactactcttcaaaatttcttaaatagaatataaaactatttaat 29301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 44024 - 44084
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| ||| |||||||||||  |||| ||||||||||||    
T  44024 ccaaacgggcatgtcacactacttttcaaattttcttaaatagaatataaaactatttaat 44084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 66079 - 66019
Alignment:
Q  233 caaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaatt 293  Q
    ||||||| ||||||||||||| ||| |||| ||||||||||  | || |||||||||||||    
T  66079 caaacggacatgctacactacatttcaaaaattcttaaatagaaaataaaactatttaatt 66019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 64382 - 64442
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||||| ||| |||||||||||||||   ||| ||||||||||||    
T  64382 ccaaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaat 64442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 76165 - 76225
Alignment:
Q  232 ccaaacgggcatgctacactaccttttaaaatttcttaaataacatatgaaactatttaat 292  Q
    |||||||||||||  ||||| | ||| |||||||||||||||  |||| ||||||||||||    
T  76165 ccaaacgggcatgtcacacttcttttcaaaatttcttaaatagaatataaaactatttaat 76225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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