View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3288-Insertion-9 (Length: 555)
Name: NF3288-Insertion-9
Description: NF3288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3288-Insertion-9 |
 | |
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| [»] chr4 (10 HSPs) |
| |
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| [»] chr2 (2 HSPs) |
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|
| [»] scaffold0262 (1 HSPs) |
| | |
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| [»] scaffold0295 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 526; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 10 - 555
Target Start/End: Original strand, 55908034 - 55908578
Alignment:
| Q |
10 |
acctactttgaagtctctatccgttagatggagaacaaatggaagccatgacaacattggttcaaacttcattggctcgttggtgagtttgaatggctta |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
55908034 |
acctactttgaagtctctatccgttagatggagaacaaatggaagccatgacaacattggttcaaacttcattggctcgttggtgagtttgaatggctta |
55908133 |
T |
|
| Q |
110 |
acttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgca |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55908134 |
acttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgca |
55908233 |
T |
|
| Q |
210 |
ccggctataattatgttggaatatactctttgttatccaagtgtcgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgc |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55908234 |
ccggctataattatgttggaatatactctttgttatccaagtgtcgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgc |
55908333 |
T |
|
| Q |
310 |
agagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccctcgttagggaattgtcc |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
55908334 |
agagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgcactcgtta-ggaattgtcc |
55908432 |
T |
|
| Q |
410 |
ttcacttattgacgtcaaaatggaacacacaagtttgggggaaaagagtgtagataattctaattcttcgatggattgtgttttaaaccatcaattaaag |
509 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
55908433 |
ttcacttattgaggtcaaaatggaacacacaagtttgggggaaaagagtgtagataattctaatttttcgatggattgtgttttaaaccatcaattaaag |
55908532 |
T |
|
| Q |
510 |
tcactccatttagcttgcaattttcagttactaaatgaaaacatca |
555 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55908533 |
tcactccatttagcttgcaattttcagttactaaatgaaaacatca |
55908578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 60 - 357
Target Start/End: Original strand, 3438006 - 3438305
Alignment:
| Q |
60 |
acaacattggttcaaacttcattggctcgttggtgagtttgaatggcttaacttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttc |
159 |
Q |
| |
|
|||||||| |||| ||||||||| || |||||||||| |||| || |||||||||||| |||||||||||| | ||| |||||||||| |||| || |
|
|
| T |
3438006 |
acaacattaattcacacttcattgacttgttggtgagtctgaagggattaacttgtcttgatttgtcgtcttcatgtatcccggatgaattactttcctc |
3438105 |
T |
|
| Q |
160 |
tattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgttatccaagtgtc---gt |
256 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| || ||| | ||| ||||||||||||||| || |
|
|
| T |
3438106 |
tattgcaattggaggtcttcctttgagaaggcttgtcctccacaattgcaccggctatagttatgctgaaatcttttctctgttatccaagtgtcaatgt |
3438205 |
T |
|
| Q |
257 |
atacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtg |
356 |
Q |
| |
|
||||||||||||||||||||||| || ||| | ||||||| | |||| | ||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3438206 |
atacaacatttggatcttcaaaaacttac-tttctaaatgatcgccatgttgtcaagttgtccatgtttcatggtgatttggtgtctataaaccttagtg |
3438304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 80 - 520
Target Start/End: Complemental strand, 547639 - 547197
Alignment:
| Q |
80 |
attggctcgttggtgagtttgaatggcttaacttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttc |
179 |
Q |
| |
|
|||| ||||||| || ||||||| ||||||||||||||| |||| ||||| || ||||||||| ||||| | ||||||||||||| || | ||| |
|
|
| T |
547639 |
attgactcgttgatgtgtttgaagggcttaacttgtcttgattttcggtcttcacgtatctcggatatgttgctctcctctattgcaatggaagctattc |
547540 |
T |
|
| Q |
180 |
ctttgagaagacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgttatccaagtg---tcgtatacaacatttggatcttca |
276 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| ||||| |||||||| | ||| || |||||||| | ||| |||||||| |||||||| |
|
|
| T |
547539 |
ctttgagaaagcttgtcctccaaaattgtttcggctatagttatgctggaatatcttgttttttgtccaagtgccaacatatccaacatttagatcttca |
547440 |
T |
|
| Q |
277 |
aaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagac |
376 |
Q |
| |
|
|||||| ||| ||| | |||| |||| || ||||||||||||||||||||||||| || ||||||||||||| | ||| | |||||| | |
|
|
| T |
547439 |
aaatgctgtttttttgactaatcaacatgttcttgacttgtctttgtttcttggtgatttggagtttataaaccttagtcagtgtgggcaactcacaaat |
547340 |
T |
|
| Q |
377 |
tcggccatgtttgccctcgttagggaattgtccttcacttattgacgtcaaaatggaacacacaagtttgggggaaaagagtgtagataattctaattct |
476 |
Q |
| |
|
| ||| ||||||| ||||||| | |||||| ||||||||| ||| |||||||||||| ||||| | ||| |||||||||| |||||||||||| |
|
|
| T |
547339 |
ttagccttgtttgcactcgtta-gtaattgtgcttcacttagtgagatcaaaatggaactcacaaaaattgggatggagagtgtagagaattctaattct |
547241 |
T |
|
| Q |
477 |
tcgatggattgtgttttaaaccatcaattaaagtcactccattt |
520 |
Q |
| |
|
| | ||||| |||| ||| || |||||| ||||| |||||||| |
|
|
| T |
547240 |
ttcaaggattttgttgtaagccctcaattgaagtctctccattt |
547197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 390
Target Start/End: Complemental strand, 1601118 - 1600814
Alignment:
| Q |
89 |
ttggtgagtttgaatggcttaacttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttcctttgagaa |
188 |
Q |
| |
|
|||||||||||||| || || ||||||||| | ||||| | || ||| ||||||||| | ||||| | |||||||||| || | || ||||||||| | |
|
|
| T |
1601118 |
ttggtgagtttgaagggtttgacttgtcttgaattgtcctattggcgtatctcggatcagttgctctcctctattgcaaaggaaaatcctcctttgagga |
1601019 |
T |
|
| Q |
189 |
gacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgttatccaagtgtc---gtatacaacatttggatcttcaaaatgccac |
285 |
Q |
| |
|
| |||| |||| | ||| ||| ||||||| |||| ||||| || ||||||||||||||||| |||| |||||||||| |||| ||| ||| |
|
|
| T |
1601018 |
ggcttgacctcgcatatttcactggctatagttatattggagtagttagtttgttatccaagtgtcaacgtatccaacatttggttcttaaaagagccga |
1600919 |
T |
|
| Q |
286 |
gtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatg |
385 |
Q |
| |
|
||| |||| |||| | |||| || |||| ||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| || |
|
|
| T |
1600918 |
ttttttgaaagatcgccatgttgccttgttgacttcgtttcttggtgatttggtttctataaaccttagtgaatgtagtatgctcacagaatcagccttg |
1600819 |
T |
|
| Q |
386 |
tttgc |
390 |
Q |
| |
|
||||| |
|
|
| T |
1600818 |
tttgc |
1600814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 12118870 - 12118967
Alignment:
| Q |
264 |
atttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgt |
361 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
12118870 |
atttggatcttcaaaatgctaagtttatgaatgattggaatgtcattgagttgtctttgtttcttggtgatttgttgtctataaacattagtaaatgt |
12118967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 80 - 356
Target Start/End: Original strand, 21833760 - 21834039
Alignment:
| Q |
80 |
attggctcgttggtgagtttgaatggcttaacttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttc |
179 |
Q |
| |
|
|||||||| || ||||||||||| || || |||||||||| |||| |||||| |||| |||||| || || | |||||||||| || |||||||| |
|
|
| T |
21833760 |
attggctcattagtgagtttgaagggtttgacttgtcttagtttgcgttctttgtatatcttggatgagttactctactctattgcaagggaaggtcttc |
21833859 |
T |
|
| Q |
180 |
ctttgagaagacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgttatccaagtgtc---gtatacaacatttggatcttca |
276 |
Q |
| |
|
|||| | || |||||||| | ||| ||||||||||||| ||||| |||||| | | |||||||||||| ||| || | ||||||||||||||| | |
|
|
| T |
21833860 |
ctttaacgaggcttgtccttcgaaaatgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacatttggatcttga |
21833959 |
T |
|
| Q |
277 |
aaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtg |
356 |
Q |
| |
|
| || || |||| |||||||||| |||| | |||||| || ||||||||||||||| | || ||||||||||||| |
|
|
| T |
21833960 |
agataacatgtttctgaatgatcaacatgttgtccagttgtattcatttcttggtgatttgatttccataaaccttagtg |
21834039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 1527763 - 1527860
Alignment:
| Q |
264 |
atttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgt |
361 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| |
|
|
| T |
1527763 |
atttggatcttcaaaattccaagtttatgaatgatttgcatgtcattgagttgtcttcgtttcttagtgatttgttgtctataaacattagtaaatgt |
1527860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 641574 - 641482
Alignment:
| Q |
158 |
tctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgttatccaag |
250 |
Q |
| |
|
|||||||||||| ||| |||||||||| |||||||||||| |||||||||||||||| ||||| |||||| | | ||||||||||||| |
|
|
| T |
641574 |
tctattgcaatgaaaggccttcctttgacgagacttgtcctctgcaattgcaccggctatacttatgatggaatcttgtgtttgttatccaag |
641482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 53761398 - 53761439
Alignment:
| Q |
314 |
ttgtctttgtttcttggtgatttggtgtctataaaccttagt |
355 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
53761398 |
ttgtctttgcttcttggtgatttggtgtccataaaccttagt |
53761439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 6007054 - 6007006
Alignment:
| Q |
80 |
attggctcgttggtgagtttgaatggcttaacttgtcttaatttgtcgt |
128 |
Q |
| |
|
|||| ||||||||||| ||||| ||||||||||||||| ||||||||| |
|
|
| T |
6007054 |
attgactcgttggtgaaattgaaaggcttaacttgtcttgatttgtcgt |
6007006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 498; Significance: 0; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 10 - 555
Target Start/End: Original strand, 1036970 - 1037514
Alignment:
| Q |
10 |
acctactttgaagtctctatccgttagatggagaacaaatggaagccatgacaacattggttcaaacttcattggctcgttggtgagtttgaatggctta |
109 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1036970 |
acctactttgaagtctctatttgttagatggagaacaaatggaaggcatgacaacattggtgcaaacttcattggctcgttggtgagtttgaatggctta |
1037069 |
T |
|
| Q |
110 |
acttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgca |
209 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1037070 |
acttgtcttaatttgtcatctttgcgcatttcggatgaattgcttttttctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgca |
1037169 |
T |
|
| Q |
210 |
ccggctataattatgttggaatatactctttgttatccaagtgtcgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgc |
309 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1037170 |
ccagctataattatgttggaatatactctttgttatccaagtgtcgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgc |
1037269 |
T |
|
| Q |
310 |
agagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccctcgttagggaattgtcc |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
1037270 |
agagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgcactcgtta-ggaattgtcc |
1037368 |
T |
|
| Q |
410 |
ttcacttattgacgtcaaaatggaacacacaagtttgggggaaaagagtgtagataattctaattcttcgatggattgtgttttaaaccatcaattaaag |
509 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1037369 |
ttcacttattgaggtcaaaatggaacacacaagtttgggggaaaagagtgtagataattctaattcttcgatggattgtgttttaaaccatcaattaaag |
1037468 |
T |
|
| Q |
510 |
tcactccatttagcttgcaattttcagttactaaatgaaaacatca |
555 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1037469 |
tcactccatttaacttgcaattttcagttactaaatgaaaacatca |
1037514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 531
Target Start/End: Original strand, 32785526 - 32785601
Alignment:
| Q |
456 |
agtgtagataattctaattcttcgatggattgtgttttaaaccatcaattaaagtcactccatttagcttgcaatt |
531 |
Q |
| |
|
|||||| | ||||||||||||| |||||||| |||| ||| || ||||||||||| |||||||| ||| |||||| |
|
|
| T |
32785526 |
agtgtacaaaattctaattctttgatggattttgttgtaatccctcaattaaagtttctccatttggctcgcaatt |
32785601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 204 - 445
Target Start/End: Complemental strand, 507 - 276
Alignment:
| Q |
204 |
attgcaccggctataattatgttggaatatactctttgttatccaagtgtcgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacga |
303 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
507 |
attgcaccggctataattatgctggaatctactctttgttatccaa---------acaacatttggatcttcaaaatgccatgtttatgaatgatcatga |
417 |
T |
|
| Q |
304 |
tgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccctcgttagggaa |
403 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||||| |||| |
|
|
| T |
416 |
tgttgcagagttgtctttgtttcttggcgatttggtgtctataaatcttagtgaatgtagcatgctcacatactcaaccatgtttgcactcgtta-ggaa |
318 |
T |
|
| Q |
404 |
ttgtccttcacttattgacgtcaaaatggaacacacaagttt |
445 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
317 |
ttatccttcacttattgagatcaaaatggaacacacaagttt |
276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0295 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0295
Description:
Target: scaffold0295; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 438 - 555
Target Start/End: Original strand, 354 - 471
Alignment:
| Q |
438 |
acaagtttgggggaaaagagtgtagataattctaattcttcgatggattgtgttttaaaccatcaattaaagtcactccatttagcttgcaattttcagt |
537 |
Q |
| |
|
||||||||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
354 |
acaagtttggggggaaagtgcgtagataattctaattcttcaatggattgtgttttaaaccatcaattaaagtcacttcatttagcttgcaattttcagt |
453 |
T |
|
| Q |
538 |
tactaaatgaaaacatca |
555 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
454 |
tactaaatgaaaacatca |
471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 531
Target Start/End: Original strand, 17627397 - 17627885
Alignment:
| Q |
45 |
caaatggaagccatgacaacattggttcaaacttcattggctcgttggtgagtttgaatggcttaacttgtcttaatttgtcgtctttgcgcatctcgga |
144 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| | || |||| ||||||||||||| || ||||| |||| ||||| ||| |||||||||||| || |
|
|
| T |
17627397 |
caaatggaagccatgacaacatcagttcacactttactgactcgctggtgagtttgaaagggttaacaaatcttgatttgccgtttttgcgcatctcaga |
17627496 |
T |
|
| Q |
145 |
tgaattgcttttttctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgtta |
244 |
Q |
| |
|
| || || | |||||||||||| | || | || |||||||||| ||||||||| | |||||| ||||| |||| |||||||| ||||||||| |
|
|
| T |
17627497 |
tatgttcctctcttctattgcaattgaagttatttctttgagaaggcttgtcctcagagattgcattaactatagttattctggaatattttctttgtta |
17627596 |
T |
|
| Q |
245 |
tccaagtgtc---gtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgt |
341 |
Q |
| |
|
|||| ||||| |||| ||||||||||||||||| |||| ||| ||||| |||| || | |||||||||| ||||||||| ||||||||| |
|
|
| T |
17627597 |
tccatgtgtcaatgtatccaacatttggatcttcagtatgcttattttttgaataatcaacatatttttgagttgtcttcatttcttggtaatttggtgt |
17627696 |
T |
|
| Q |
342 |
ctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccctcgttagggaattgtccttcacttattgacgtcaaaatggaacacacaa |
441 |
Q |
| |
|
|| ||||||||||| | ||| | |||||| || || ||| ||||| | ||||||| | || ||||||||||||| ||| | ||||||||| |||| |
|
|
| T |
17627697 |
ctgtaaaccttagttattgtcggatgctcgacgaatcagccttgttttcactcgtta-gtaaatgtccttcacttaatgagataaaaatggaatgcacat |
17627795 |
T |
|
| Q |
442 |
gtttgggggaaaagagtgtagataattctaattcttcgatggattgtgttttaaaccatcaattaaagtcactccatttagcttgcaatt |
531 |
Q |
| |
|
| | |||||| ||||| || | ||||||||||||| | |||||| ||| ||| || ||||||||| || ||| |||| |||| ||||| |
|
|
| T |
17627796 |
ctattggggaagagagtctaaagaattctaattctttggtggatttcgttgtaagccctcaattaaaatctctctatttggctttcaatt |
17627885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 520
Target Start/End: Original strand, 17636137 - 17636212
Alignment:
| Q |
445 |
tgggggaaaagagtgtagataattctaattcttcgatggattgtgttttaaaccatcaattaaagtcactccattt |
520 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||| ||| |||| |||||| |||||| ||||| |||||||| |
|
|
| T |
17636137 |
tgggggaaaataatgtagagaattctaattcttcgatgaattttgttgtaaaccctcaatttaagtctctccattt |
17636212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 334
Target Start/End: Original strand, 5767214 - 5767294
Alignment:
| Q |
254 |
cgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgat |
334 |
Q |
| |
|
||||| |||||||||||||||||| || | ||| |||||||||| ||| || |||||||||||||||||||||||| |
|
|
| T |
5767214 |
cgtatccaacatttggatcttcaatatactgattttttgaatgatcattgtgttgctgagttgtctttgtttcttggtgat |
5767294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 434
Target Start/End: Original strand, 19468064 - 19468237
Alignment:
| Q |
260 |
caacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaat |
359 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19468064 |
caacatttggatcttcaacgtgctgggtttttgaatgatcactatgttgataagttgtctttgtttcttggtgatttagtgtctataaaccttagtgaat |
19468163 |
T |
|
| Q |
360 |
gtagcatgctcacagactcggccatgtttgccctcgttagggaattgtccttcacttattgacgtcaaaatggaa |
434 |
Q |
| |
|
||| |||||| | || || ||||| | ||||||| |||||||||||||||||| ||| ||||||||||| |
|
|
| T |
19468164 |
gtatggacctcacatattcaaccttgtttacactcgtta-ggaattgtccttcacttagtgagatcaaaatggaa |
19468237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 29658545 - 29658692
Alignment:
| Q |
293 |
aatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccc |
392 |
Q |
| |
|
|||||||| |||| || ||||| ||||||||||||| | ||||||||||||||||||||| || |||| | | ||| ||||| || || ||||| | | |
|
|
| T |
29658545 |
aatgatcaacatgttgccgagttctctttgtttcttgctcatttggtgtctataaaccttactggatgttggaagctgacagaatcagctttgttttcgc |
29658644 |
T |
|
| Q |
393 |
tcgttagggaattgtccttcacttattgacgtcaaaatggaacacacaa |
441 |
Q |
| |
|
|||||| |||||||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
29658645 |
tcgtta-taaattgtccttcacttagtgacatcaaaatggaatacacaa |
29658692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 29691060 - 29691207
Alignment:
| Q |
293 |
aatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccc |
392 |
Q |
| |
|
|||||||| |||| || ||||| ||||||||||||| | ||||||||||||||||||||| || |||| | | ||| ||||| || || ||||| | | |
|
|
| T |
29691060 |
aatgatcaacatgttgccgagttctctttgtttcttgctcatttggtgtctataaaccttactggatgttggaagctgacagaatcagctttgttttcgc |
29691159 |
T |
|
| Q |
393 |
tcgttagggaattgtccttcacttattgacgtcaaaatggaacacacaa |
441 |
Q |
| |
|
|||||| |||||||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
29691160 |
tcgtta-taaattgtccttcacttagtgacatcaaaatggaatacacaa |
29691207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 29718572 - 29718719
Alignment:
| Q |
293 |
aatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccc |
392 |
Q |
| |
|
|||||||| |||| || ||||| ||||||||||||| | ||||||||||||||||||||| || |||| | | ||| ||||| || || ||||| | | |
|
|
| T |
29718572 |
aatgatcaacatgttgccgagttctctttgtttcttgctcatttggtgtctataaaccttactggatgttggaagctgacagaatcagctttgttttcgc |
29718671 |
T |
|
| Q |
393 |
tcgttagggaattgtccttcacttattgacgtcaaaatggaacacacaa |
441 |
Q |
| |
|
|||||| |||||||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
29718672 |
tcgtta-taaattgtccttcacttagtgacatcaaaatggaatacacaa |
29718719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 434
Target Start/End: Complemental strand, 33161016 - 33160874
Alignment:
| Q |
291 |
tgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgc |
390 |
Q |
| |
|
|||||||||| |||| || ||||| ||||||||||||| || |||||||||||||||||||| || |||| | | ||||||||| || || ||||| | |
|
|
| T |
33161016 |
tgaatgatcaacatgttgccgagttctctttgtttcttgctgctttggtgtctataaaccttaatggatgttggaggctcacagaatcagcattgttttc |
33160917 |
T |
|
| Q |
391 |
cctcgttagggaattgtccttcacttattgacgtcaaaatggaa |
434 |
Q |
| |
|
|| |||| || ||||||||||||| |||| ||||||||||| |
|
|
| T |
33160916 |
acttgtta-caaactgtccttcacttagtgacatcaaaatggaa |
33160874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 52093264 - 52093223
Alignment:
| Q |
313 |
gttgtctttgtttcttggtgatttggtgtctataaaccttag |
354 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
52093264 |
gttgtctttggttcttggtaatttggtgtctataaaccttag |
52093223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 278
Target Start/End: Complemental strand, 17352303 - 17352166
Alignment:
| Q |
144 |
atgaattgcttttttctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgtt |
243 |
Q |
| |
|
|||||||||| | |||||||||| || ||| ||||||| || ||||||||||| ||| ||| ||| ||||| | ||||| ||||| | |||||||| |
|
|
| T |
17352303 |
atgaattgctctcctctattgcaaaggagggttttcctttcaggagacttgtccttcaatattccactggctacagttatgctggaactttttctttgtt |
17352204 |
T |
|
| Q |
244 |
atccaagtg---tcgtatacaacatttggatcttcaaa |
278 |
Q |
| |
|
||||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
17352203 |
atccaagtgccaacgtatccaacattaggatcttcaaa |
17352166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 7993792 - 7993921
Alignment:
| Q |
311 |
gagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccctcgttagggaattgtcct |
410 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||| || ||| ||||| | ||||||| | || ||||| |
|
|
| T |
7993792 |
gagttgtcattacttcttggtgatttggtgtctataaaccttagtgaatgtcggatgctcacagaatcagccttgttttcactcgtta-gaaactgtcca |
7993890 |
T |
|
| Q |
411 |
tcacttattgacgtcaaaatggaacacacaa |
441 |
Q |
| |
|
|||||| ||| |||||||||||| ||||| |
|
|
| T |
7993891 |
tcacttcgtgaaatcaaaatggaacgcacaa |
7993921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 8913680 - 8913723
Alignment:
| Q |
312 |
agttgtctttgtttcttggtgatttggtgtctataaaccttagt |
355 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8913680 |
agttgtctttgtttcttggtaatttggtgtctataaaccttagt |
8913723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 355
Target Start/End: Complemental strand, 6432635 - 6432596
Alignment:
| Q |
316 |
gtctttgtttcttggtgatttggtgtctataaaccttagt |
355 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6432635 |
gtctttgtttcttgctgatttggtgtctataaaccttagt |
6432596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 440
Target Start/End: Original strand, 6596562 - 6596684
Alignment:
| Q |
317 |
tctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgccctcgttagggaattgtccttcactt |
416 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| | | ||| | ||||||||| || ||| ||||| |||||| || | ||||||||||| ||| |
|
|
| T |
6596562 |
tctttgtttcttggtgatttggtttctataaaccttaatcattgttcaaggctcacagaatcagccgtgttttccctcg-taagaaattgtccttcgctt |
6596660 |
T |
|
| Q |
417 |
attgacgtcaaaatggaacacaca |
440 |
Q |
| |
|
| ||| |||||||| || ||||| |
|
|
| T |
6596661 |
agtgagatcaaaatgcaaaacaca |
6596684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 355
Target Start/End: Original strand, 6594125 - 6594257
Alignment:
| Q |
226 |
tggaatatactctttgttatccaagtgtc---gtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttg |
322 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||| ||||| | | || ||| |||||||||| |||| || |||||||||||| |
|
|
| T |
6594125 |
tggaatgtactctttgttatccaagtgtcgatgtatacaacatttgaatcttaagtacgctcgttttctgaatgatcaacatgttgccgagttgtctttg |
6594224 |
T |
|
| Q |
323 |
tttcttggtgatttggtgtctataaaccttagt |
355 |
Q |
| |
|
||||||| || |||| ||| || ||||||||| |
|
|
| T |
6594225 |
tttcttgctggtttgaagtccattaaccttagt |
6594257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 6436798 - 6436757
Alignment:
| Q |
234 |
actctttgttatccaagtgtc-gtatacaacatttggatctt |
274 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6436798 |
actctttgttatccaagtgtcagtatacaacatttggatctt |
6436757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 6602821 - 6602865
Alignment:
| Q |
317 |
tctttgtttcttggtgatttggtgtctataaaccttagtgaatgt |
361 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
6602821 |
tctttgtttcttactaatttggtgtctataaaccttagtgaatgt |
6602865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 6403458 - 6403407
Alignment:
| Q |
226 |
tggaatatactctttgttatccaagtgt---cgtatacaacatttggatctt |
274 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
6403458 |
tggaatatactctctgttatccaagtgtagatgtatacaacatttggatctt |
6403407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 434
Target Start/End: Original strand, 10169726 - 10169868
Alignment:
| Q |
291 |
tgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgc |
390 |
Q |
| |
|
||||||||||| |||| | ||||| ||||||||| |||||||||| |||||| ||||||||||| ||||| | ||||| | || || ||||||| |
|
|
| T |
10169726 |
tgaatgatcactatgttgatgagttttctttgtttattggtgatttagtgtctgtaaaccttagtcaatgtttggagatcacatattcatccttgtttgc |
10169825 |
T |
|
| Q |
391 |
cctcgttagggaattgtccttcacttattgacgtcaaaatggaa |
434 |
Q |
| |
|
||||||| |||||||||||||||||| ||| ||||||||||| |
|
|
| T |
10169826 |
actcgtta-ggaattgtccttcacttagtgagatcaaaatggaa |
10169868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 434
Target Start/End: Original strand, 10177251 - 10177393
Alignment:
| Q |
291 |
tgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtgaatgtagcatgctcacagactcggccatgtttgc |
390 |
Q |
| |
|
||||||||||| |||| | ||||| ||||||||| |||||||||| |||||| ||||||||||| ||||| | ||||| | || || ||||||| |
|
|
| T |
10177251 |
tgaatgatcactatgttgatgagttttctttgtttattggtgatttagtgtctgtaaaccttagtcaatgtttggagatcacatattcatccttgtttgc |
10177350 |
T |
|
| Q |
391 |
cctcgttagggaattgtccttcacttattgacgtcaaaatggaa |
434 |
Q |
| |
|
||||||| |||||||||||||||||| ||| ||||||||||| |
|
|
| T |
10177351 |
actcgtta-ggaattgtccttcacttagtgagatcaaaatggaa |
10177393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 356
Target Start/End: Original strand, 51763828 - 51764101
Alignment:
| Q |
86 |
tcgttggtgagtttgaatggcttaacttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttcctttga |
185 |
Q |
| |
|
||||||||||||||||| || || |||| |||| ||||| | |||| ||||| ||||| ||||| | || ||||||| || |||||||| ||||| |
|
|
| T |
51763828 |
tcgttggtgagtttgaagggtttgacttctcttgatttgaagcgtttgaaaatctctgatgagttgctctactcgattgcaagggaaggtcttcttttga |
51763927 |
T |
|
| Q |
186 |
gaagacttgtcctccaaaattgcaccggctataattatgttggaatatactctttgttatccaagtgtc---gtatacaacatttggatcttcaaaatgc |
282 |
Q |
| |
|
||| |||||||| |||| |||||| ||||||| ||||| |||||| | |||| ||||||| |||| || | ||||||||||||||||| |||| |
|
|
| T |
51763928 |
aaaggcttgtccttcaaatttgcacgggctatagttatgctggaatcatttgtttggtatccaactgtcaacgtttgaaacatttggatcttcaagatgc |
51764027 |
T |
|
| Q |
283 |
cacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagtg |
356 |
Q |
| |
|
||| |||||||| |||| | | | ||||||||||||||| || |||||||||| ||||||||||||| |
|
|
| T |
51764028 |
tggttttctgaatgatatacatgttgtaaatttgtctttgtttcttagtaatttggtgtccataaaccttagtg |
51764101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 351
Target Start/End: Complemental strand, 33396976 - 33396948
Alignment:
| Q |
323 |
tttcttggtgatttggtgtctataaacct |
351 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
33396976 |
tttcttggtgatttggtgtctataaacct |
33396948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 37938407 - 37938351
Alignment:
| Q |
295 |
tgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaacct |
351 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
37938407 |
tgatcaccatgtcgctgagttgtctttgtttcttcctgatttagtgtcaataaacct |
37938351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 38267147 - 38267207
Alignment:
| Q |
295 |
tgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaaccttagt |
355 |
Q |
| |
|
||||||| |||| || |||||||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
38267147 |
tgatcaccatgttgccgagttgtctttgtttcttcctcatctggtgtctataaaccttagt |
38267207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 491
Target Start/End: Complemental strand, 32267868 - 32267785
Alignment:
| Q |
408 |
ccttcacttattgacgtcaaaatggaacacacaagtttgggggaaaagagtgtagataattctaattcttcgatggattgtgtt |
491 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| || | ||| |||||||| |||| | |||||| |||| |||||||| |||| |
|
|
| T |
32267868 |
ccttcacttagtgagatcaaaatggaacacacatgtattgggaaaaagagtctagagagttctaaatctttgatggattttgtt |
32267785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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